>input_sequence_44464
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----------------------------------------------------ATGAACGGCATGTACTACCCTCAGCGTT
TCAGCAACATGATGATCGGCTACCTCAACCTGGCGACGCTCCTGGCCTCCATCCCGGTCATCGGTGCGGGGCTCTGGCTC
GCCAAGGGCTCCACGACGACGTGCTCCTCCATGCTGCAGACGCCGCTGCTCATCATCGGCTTCATCGTGCTCCTCATCTC
CCTCGCGGGGTTCGTGGGCGCCTGCTTCCACGTCGCCTGGGCGCTGTGGCTCTACCTCTTCGCCGTGATACTCCTCATCG
GCATGCTGCTCGGGCTCACCATGTTCGGGTTCGCCGTCACGGCGGGGGGCGGCGGCACGCAGGTGCAAGGGAGGCCGTAC
AGGGAGTACCACATCTCGGACTACTCCTCGTGGCTCCAGAAGCATATGCAGGACATCAAGTACTGGAAGCCCGCGCTGGC
CTGCGTCGTCGGCTCCAAGGCCTGCCCCAAGATCGCCAACTGGACTCCCATGGATTACCTCCAGCATGATCTCACGCCAA
TACAGGTTTGCAGTTCAGCCACCGGTCCATTTTCTTCCATAGTTGCTCCTCTTGCTATTTGTCGCCACTACTTTCAGCAC
TTGTAGTTGTAGTACAACAGAATTCATAATCTGAAGTATAG----CCGGCACAAACATAACAAATTGTCAAAGAAATGGT
AACATAAAAAATAGCTAGACAAATTATTGATCCAGTTCACCAGTTGCATCTATGTAAATTTAAATATCTCAAGCACAGGT
TTATGTTCATTGTCTATTTGGACAAAAACATCAAATTTATTGACCACCAAGATTCAAAACCCAGTAAAGAATGTGACCTG
AGGACAAAGTTTGGACCCATTTTCAGATAAACTAAACAAACTAGGTCTACTAAATCTCTAGCTCAGAGCATCTTCAGTGC
TCCTGCACCTCTGCTACTTTAATACAAGTTGTAGTTCTAACTAATAGCTTTGCTGCTAAAATTACTAATGGAACTAATCA
CTATCATGCAGTCTGGGTGCTGCAAGCCACCAACATCATGCACATACAGCGGGGGGATGCCGGTCGGAGCGCAGGACGAG
GACTGCTACCAGTGGAACAATGCCCCAAACATCCTGTGCTACCAGTGTAACTCGTGCAAGGCCGGCGTGATGGAGCAGGT
GCGCCAGGACTGGCACAAGATCTCCGTGCTAAACGTCATCGTGCTCGTCTTCCTCATCTGCATCTGCGCCTGCGGATGCT
GCGCCTTCAGAAACGCCCGCCGCTCCGTCTCCGAGTACCCATACGGGGTAAACCGCATGTCCAAGATCAACCCACGCTGG
GACTACTACTGGTACTTTCAGCCAAAAATAAAAAACAAAATAAAATTGTCACACCATTTCTGTTTGATTGCTGCTTTTCA
TTGGCATTTCTTTTCTCTTCAGATGTTTGGTTTCAGCCCCAAAAATGCATTTCTACA--GTCTCATGATCAAAGCGAAAA
AATGGATTAGTTT-----------ATTTCTGAATAGTGCTCATTCAACAGAAAAGGGGGGCGGGGTGTTCCTTCTATTCT
GTTTTCACAACTGCATAATCATGCTTCGGTGCTTCTTCAT----------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------TAACGAAATTCTTTG--
-----------------------------------------------------------------CACACATAAAAAAAG
TAATGATGACACTGGCAATATAACGCAATTTCAGTTTGTGGCCATCCATTTGCTGTGATC-TTCTAACACTCCTTTATGA
TTTTCGCTACAGGTGGCGATGGTTCCGCGATAGGAGGGAACAGATGTACTAG----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
>chr1D_1_TraesCS1D01G069300
CTATAAAGCAAAGCAGGCCTGCTTCGTGCACTTTGATGTAAGGAG-------AAGAAAGAAAGAAAGGGCCACGGTCGTC
CAGAAAGCCGGAATCCGGATGCCCAGACCTATCTCCTGTGTTTATGTGTTTTTGCTTCATGATTAAGCATCCGGGCAGCG
GCTAAGGCACCCGCGCATCGAGGACGATGCCGCGCCA---------------------------------TAATTCCGAT
GCTTTTTGGCAATGGAGAATCGATGCCAAACATGGAAATCTGTGGGG-GGTTTTATTCTTGTTCCAGCAAATAAGAAAAC
AGACAGATATATGCTTCTCTCAAAGACATATATATGATGCCTGGAATTCTCACGGCAGCA--------------------
--------------------------------------------------------------------------ATATCC
TTGTTTATTGGTA--TTATTATGAGGCCTGATGCTCTTGAATTCTTATCCTGTGGACTGGCTGAGCTTCAATGGA--TGT
GGAATGTGAAAATGGCAGTGCTTCCTACTATCTTACTGTAAAATGGTA-TTTTT---GCAAGATAGACAGAAATAGGCTG
CTAAGGCGGAAAACACGGCGACGGGTAGAAATCAAACACGTAGCGCGAAAAAAGCGAAAGTTCGAACCGAAACAAAGTAA
ATAAATAAAGGCAAGGGTAGGCGCCTCAGATTTCCCAAAACCACCACGGCATTATTAAAGAACGGCCTCCACAAAGG---
---CAAAGCCAATGCCAGCATTAGAATACCCACAAGTACGCCGCATTGCAGGGACACACACG--CACGCACAGTCACCAG
GATGCAAAAGTAGTTC-TCCAAGGCAAGAAGAAAGGCAAAGCTTGCTTTGCACCAGGCCGCTCCAGGACACACTACCACC
ATCCCAATCAGTAGAAGAGAGAGTGAGA----GTGAGACAAGCCAAATCAAATTTAGGGCAACAA---GAGCCAAGAACA
CCGTAGCCAGCCG----TATCATATAAACCAAACCAAAGGC-------CAGCAGCAGTGCACATAAGAACAGAGCAGGAG
CAGGGGAAGGAGCAAGAAGAACCTGAGCAGGAGCAGGAGCAGGAAGCA--AGATGAACGGCATGTACTACCCTCAGCGTT
TCAGCAACATGATGATCGGCTACCTCAACCTGGCGACGCTCCTGGCCTCCATCCCGGTCATCGGTGCGGGGCTCTGGCTC
GCCAAGGGCTCCACGACGACGTGCTCCTCCATGCTGCAGACGCCGCTGCTCATCATCGGCTTCATCGTGCTCCTCATCTC
CCTCGCGGGGTTCGTGGGCGCCTGCTTCCACGTCGCCTGGGCGCTGTGGCTCTACCTCTTCGCCGTGATACTCCTCATCG
GCATGCTGCTCGGGCTCACCATGTTCGGGTTCGCCGTCACGGCGGGGGGCGGCGGCACGCAGGTGCAAGGGAGGCCGTAC
AGGGAGTACCACATCTCGGACTACTCCTCGTGGCTCCAGAAGCATATGCAGGACATCAAGTACTGGAAGCCCGCGCTGGC
CTGCGTCGTCGGCTCCAAGGCCTGCCCCAAGATCGCCAACTGGACTCCCATGGATTACCTCCAGCATGATCTCACGCCAA
TACAGGTTTGCAGTTCAGCCACCGGTCCATTTTCTTCCATAGTTGCTCCTCTTGCTATTTGTCGCCACTACTTTCAGCAC
TTGTAGTTGTAGTACAACAGAATTCATAATCTGAAGTATAG----CCGGCACAAACATAACAAATTGTCAAAGAAATGGT
AACATAAAAAATAGCTAGACAAATTATTGATCCAGTTCACCAGTTGCATCTATGTAAATTTAAATATCTCAAGCACAGGT
TTATGTTCATTGTCTATTTGGACAAAAACATCAAATTTATTGACCACCAAGATTCAAAACCCAGTAAAGAATGTGACCTG
AGGACAAAGTTTGGACCCATTTTCAGATAAACTAAACAAACTAGGTCTACTAAATCTCTAGCTCAGAGCATCTTCAGTGC
TCCTGCACCTCTGCTACTTTAATACAAGTTGTAGTTCTAACTAATAGCTTTGCTGCTAAAATTACTAATGGAACTAATCA
CTATCATGCAGTCTGGGTGCTGCAAGCCACCAACATCATGCACATACAGCGGGGGGATGCCGGTCGGAGCGCAGGACGAG
GACTGCTACCAGTGGAACAATGCCCCAAACATCCTGTGCTACCAGTGTAACTCGTGCAAGGCCGGCGTGATGGAGCAGGT
GCGCCAGGACTGGCACAAGATCTCCGTGCTAAACGTCATCGTGCTCGTCTTCCTCATCTGCATCTGCGCCTGCGGATGCT
GCGCCTTCAGAAACGCCCGCCGCTCCGTCTCCGAGTACCCATACGGGGTAAACCGCATGTCCAAGATCAACCCACGCTGG
GACTACTACTGGTACTTTCAGCCAAAAATAAAAAACAAAATAAAATTGTCACACCATTTCTGTTTGATTGCTGCTTTTCA
TTGGCATTTCTTTTCTCTTCAGATGTTTGGTTTCAGCCCCAAAAATGCATTTCTACA--GTCTCATGATCAAAGCGAAAA
AATGGATTAGTTT-----------ATTTCTGAATAGTGCTCATTCAACAGAAAAGGGGGGCGGGGTGTTCCTTCTATTCT
GTTTTCACAACTGCATAATCATGCTTCGGTGCTTCTTCAT----------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------TAACGAAATTCTTTG--
-----------------------------------------------------------------CACACATAAAAAAAG
TAATGATGACACTGGCAATATAACGCAATTTCAGTTTGTGGCCATCCATTTGCTGTGATC-TTCTAACACTCCTTTATGA
TTTTCGCTACAGGTGGCGATGGTTCCGCGATAGGAGGGAACAGATGTACTAGGCTAGCCATCGGAACTCAACTCATGTAT
AATATTTTCTTGATGGCAAATGGCCGAGGGGTTGGGTCAGTTCTTCATAGCACTCTGGTAGTGACCAATAATTAATCTTC
TGTAGATATTCAGTATGAGGAAAGTGCAAGATGGTGAAGTGGAAGGCATGTGTAGTTTATCCAGTATTGGT---AGAATG
CTTTGCATATTGTAGCATACTTAGTTAGAGAATTCAGAAGAGAAGAGACTTCATGTCTATGGTGGGAAATCCAGTCAGCT
ATATATATGACCATATCAGCACATGTACTGTTGGTGTGACTTCTATTTCCCATGTTTTGGTCATGCCTACCTTCTGATAT
GATATCAGTAGACCCATAGACTGCGGCTAAATCTAAGACAGGCTCTCCATCTTTAGCACTCATGGCATGGACCGTCGTAC
TTTGAAGTGATTTGAAAACACTTTAGATAGTGGATACAGCTCAGCGATATTTCAGAAAGAAATAAGTTCTAACTAAAGGA
AAAAA-ATATAATAATGAGATGACAAACAAATGGG-AAAAATCAAATAATTTTATCACA--AAAAAGTGCAGTGATCATC
TACAATTAGTATTGGCTACAACAGCATATATTCCTGTTAACCTTTCTCCACTATGGTAGACAAAGTGTTTTACATTTCTT
TTAGTACATATCTAGTTGGTGAGTTCGAAAGAGAAGTGATGTCATGTCTATCAAGTAAAATCCAG--AGAGTCAGCTATA
AGACTATATCAGCACATGTACTGTTGGTCTGACTTCTATAGTTGTCATGTTTTGGCCTGTCTACCTTCTGATATGATTA-
CCCTAAACTGAGGCT--AAACCTAAGACAGGCTCTCCAACTTCAGCACCCATGGACCATGGC------------------
-------AAGGAAACACTTTACAGCTCAGCAATAGTTCAGAAGGCACTGCTAATTCAAGGCAGAATAATGTAACGGTAAG
ACAAACACCTGATAAGAACGAAATAACTGTATCACAAGCAATGTGTAGT
>chr1A_1
CTATAAAGCAAAGCAGGCCTGCTTCGTGCACTCTGATGTAAGGAGGAGAAG-----AAGAAAGGAAGGGCCATGGTCGTC
CAGAAAGCCGGAATCCGGATGCCCGGACCTATCTCCTGTGTTTATGTGTTTTTGCTTCATGATTAAGCATCCGGGCAGCG
---------------------------------GCCA---------------------------------TAATTCCGAT
GCTTTTGGGCAATGGAGAATCGATGCCAAACATGGAAATCTGTGGG-AGGTTTTATTCTTATTCCAGCAAATAAGAAAAC
AGACAGATATATGCTTCTCTCAAATATATA--------------------------------------------------
---------------------------------------------------------------------GGACTATATCC
TTGTTTATTGGTA--TTATAAGGCA---TGATGCTCTTCAATTCTTATCCTGTGGACTGGCTGAGCTTTGATGAATGTGA
AAAAAATGAAAATGGCAGTGCTTCCTACCATTTTACTGTAAAATGGTATTTTTT---GCAAGAAAGAAAGAAATAGACTG
CTAAGGCGGAAAACACGGCGACGGGTTGAAATCAAACACGTAGCGCGAAAAAAGCGAAAGCTTGAACCGAAACAAATTAA
ACAAATAAAGGCG-----------------------AAAACCACCACGGCATTATTAAAGAACGGCCTCCACAAAGGCAA
AGCCAAAGCCAAAGCCAGCATTAGAATACCCACAAGTACGCCGCATTGCAGGGACACACACATACACGCACAGTCACCAG
GATGCAAAAGTAGTTCCTCCAAGGCAACAAGAAAGGCAAGGCTTGCTTTGCACCAGGCCGCTCCAGGACACACTACCACC
ATCCCAATCAGTAGAAGAGAGAGTGAGAGTGAGTGAGACAAGCCAAATCAAATTAAGGGCAACAACAAGAGCCAAGAACA
CCGTAGCTAGCTATCCATATCATATAAACCAAACCAAAGGCCAA----CAGCAGCAGTGCACATAAGAACAGAGCAGGAG
CAGGAGAAGGAGCAGGAAGAACCTGAGCAGGAGCA---------------AGATGAACGGCATGTACTACCCTCAGCGTT
TCAGCAACATGATGATCGGCTACCTCAACCTGGCCACGCTCCTGGCCTCCATCCCGGTCATCGGGGCGGGGCTCTGGCTG
GCCAAGGGCTCGACGACGACGTGCTCCTCCATGCTGCAGACGCCGCTGCTCATCATCGGCTTCATCGTGCTCCTCATCTC
CCTCGCGGGCTTCGTGGGCGCCTGCTTCCACGTCGCATGGGCGCTGTGGCTCTACCTCTTCGCCGTGATACTCCTCATCG
GCATGCTGCTCGGGCTCACCATGTTCGGGTTCGCCGTCACGGCGGGGGGCGGCGGCACGCAGGTGCAGGGCAGGCCGTAC
AGGGAGTACCACATCTCGGACTACTCCTCGTGGCTCCAGAAGCATATGCAGGACATCAAGTACTGGAAGCCCGCGCTGGC
CTGCGTCGTCGGGTCCAAGGCATGCCCCAAGATCGCCAACTGGACTCCCATGGATTACCTCCAGCATGATCTCACGCCAA
TACAGGTTTGCAGTTCAGCCACCGGTCCATTTTCTTCCATGTTTGCTCCTCTTGCTATTTGTCACCACTGCTTTCAGCAC
TTGTAGTTGTAGTACCACAGAATTGATGATCTGAACTATAG----CCAGCACAAACATAACAGATTGTCAAAGAAATGGT
AACATAAAAAATAGCTAAACAATTTATTGATCCAGTTCACCAGTTGCATCTATGTAAATTTAAATATCTCAAGCACAGGT
TTATGTTCATTGTCTATTTGGACAAAAACATCAAATTTATTGACCACCAAGATTCAAAACCCAGTAAAGAGTGTGACCCC
AGGACAAAGTTTGAACCCATTTTCAGATAAACTAAACAAACTAGGTCTACTAAATCTCTAGCCCAGAGCATCTTCAGTGC
TCCTGCACCTCTGCTACTTTAGTACAAGTTGTAGTTCTAACTAATAGCTTTGCTGCTAAAATTACTAATGGAACTATGCG
CTATCATGCAGTCTGGGTGCTGCAAGCCACCAACATCATGCACATACAGCGGGGGGATGCCGGTCGGAGCGCAGGACGAG
GACTGCTACCAGTGGAACAATGCCCCAAACATCCTGTGCTACCAGTGTAACTCGTGCAAGGCCGGCGTGATGGAGCAGGT
GCGCCAGGACTGGCACAAGATCTCCGTGCTAAACGTCATCGTGCTCGTCTTCCTCATCTGCATCTGCGCCTGCGGGTGCT
GCGCCTTCAGAAACGCCCGCCGCTCCGTCTCCGAGTACCCATACGGGGTAAACCGCATGTCCAAGATCAATCCACGCTGG
GACTACTACTGGTACTTTCAGCCAAAAATAAAAAACAAAATAAAATTGTCACACCATTTCTGTTTGATTGCTGCTTTTCA
CTGGCATTTGTTTTCTCTTCAGATGTTTGGTTTCAGCCCCCAAAATGCATTTC--CACAGTCTCATGATTAANNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACACATAAAAAAAG
TAATGATGACACTGGCAATATAACGCAATTTCAGTTTGTGGCCATCTATTTGCTGTGACTTTTCTAACACCGCTTTATGT
TTTTTCCTACAGGTGGCGATGGTTCCGCGATAGGAGGGAACAAACGTACTAGGCTAGCTATTGGAACTCAACTCATGTAT
AATATTTTCTTGATGGTAAATGGCCGAGGGGTTGGGTCAGTTCTTCATAGCACTCTGGTAGTGGCCAATAATTAATCTTC
TGTAGATAATCAGTATGAGGAAAGTACAAGATGGTGAAGTGGAAAGCATGTGTAGTTTATCCAGTATTGGTAGAAGAATG
CTTTGCATTTTGTAGCATATTTAGTTAGAGAATTCAGAAGAGAAGAGACTTCATGTCTATGGTGGGAAATCCAGTCAGCT
ATATATATGACCATATCAGCACATGTACTGTTGGTGTGACTTCTATTTGCCATGTTTTGGTCATGCCCACCTTCTGATAT
GATATCAGTAGACCCATAGACTGCAGCTAAATCTAAGACAGGCTCTCCATCTTTAACACTCGTGGCATGGACCGTCTTAT
TTTGAATTGATTTGAAAGCACTTTAGATAGTGGATACAGCTCAGCGATATTTCAGAAAGAACTAAGTTCTAACTCAAGGG
--AAA-ATATAATAATGAGATGACAAACAAATGAG-AAAAATCAAACAATTTTATTATCACAAAAAGTGCAGTGATCATC
TACAATCAGTATTGGTTACAACAGCATATATTCCCATTAACCTTTCTCCACTATGGTAGCCAAAGTGTATTACATTTCTT
TTAGTACATATCTAGTTGGTGAGTTTGAAAGAGAAGTGATGTCATGTCTATGGAGTAAAATCCACAGAGAGTCAGCTATA
TGACTATATCAGCACATGTACTGTTGGTCTGACTTCTATAGTTGTCATGTTTTGGCCTGTCTACCTTGTGATATGATTAC
CCCTAAACTGAGGCTCTAAACCTAAGACAGGCTCTCCAACTTCAGAACCCATGGACCATGGTA---TTTTTGACGTGGTT
GTCTGGTAAGGAAACACTTTACAGCTCAGCAATAGTTCAGAAGGCGCTTCTAGTTCAAGGCAGAATAATGTAACGATAAG
ACAAACAACTGATAAGAACTAAATAACAGTATCACAAGCAATGTGCAGT
>chr1B_1
CTATAAAGCAAAGCAAGCCTGCTTCGTGCACTCTGATGTAAGGAGAAGAAGAAAGAAAGAATGAAAGGGCCATGGTCGTC
CAGAAAGCCGGAATCCGGATGCCCAGACCTATCTCTTGTGTTTATGTTTC-TTGCTTCATGATTAAGCATCCGGGCAGCG
---------------------------------GCTAAGGCACCCGTGCATCGAGGACGATGCCGCGCCGTAATTCCGAT
GCTTTTTGGCAATGGAGAATCGATGCCAAACATGGAAATCTGTGGGGAGGTTTTATTCTTATTCCAGCAAATAAGAAAAC
AA----ATATATGCTTCTCTCAAATATATACTCCCTCCGTCCCAAAATTCTTGTCTTAGATTTGTCCAAATACGGATGTA
TCAAGTCACGTTTTAGTATTAGATACATCCGTATCTAGACTAATCTAAGACAAGAATTTTGGGACAAAGGGAGTACATCC
TTGTTTATTGGTTTTTTATTATAAGGCCTGATGCTCTTGAATTCTTATCCTGTGGACTGGCTGAGCTTTAGTGGA--TGT
AAGATGTGAAAATGGCAACGCTTC---CCATTTTACTGCAAAATGGTATTCTTGCAAGAAAGAAAGAAGGAAATAGAGTG
CCGAGGCGGAAAATACGGTGACGGGTTGAAAGCATACACGTAGCGCGAAAAAGGCCAAAGTTCGAACCAAAACAAAGTAA
AT----AAAGGCAAGGGTAGGCGCCTCAGATTTCCCAAAACCACCACGGCATTATTAAAGAACGGCCTCCACAAAGG---
---CAAAGCCAAAGCCAGCGTTAGAATACCCACAAGTACGCCGCATTGCAGGGACACACA----CACGCACAGTCACCAG
GATGCAAAAGTAGTTC-TCCAAGGCAAGAAGAAAGGCAAAGCTTGCTTTGCACCAGGCCGCTCCAGGACACACTACCACC
ATCCCAATCAGTAGAAGGGG----GAGTGAGAGTGAGACAAGCCAAATCAAATGAAGGGCAACAA---GAGCCAAGAACA
CCATAGGTAG----CCATATCATATAAACCAAACCAAAGGCCAGCAGGCAGCAGCAGTGCACATAAGAACAGAGCAGGAG
CAGGGGAAGGAGCAAGAAGAACCTGAGCAGGAGGAGCAGGAGCTGGACCGAGATGGACGGCATGTACTACCCTCAGCGTT
TCAGCAACATGATGATCGGCTACCTCAACCTGGCCACGCTCCTGGCCTCCATCCCGGTCATCGGGGCGGGGCTCTGGTTG
GCCAAGGGCTCCACGACGACGTGCTCGTCCATGCTGCAGACGCCGCTGCTCATCATCGGCTTCATCGTGCTCCTCATCTC
CCTCGCCGGCTTCGTGGGCGCCTGCTTCCACGTCGCCTGGGCGCTGTGGCTCTACCTCTTCGCCGTGATACTCCTCATCG
GCATGCTGCTCGGGCTCACCATGTTCGGGTTCGCCGTCACGGCGGGAGGCGGCGGCATGCAGGTGCAGGGGAGGCCGTAC
AGGGAGTACCACATCTCGGACTACTCCTCGTGGCTCCAGAAGCATATGCAGGACATCAAGTACTGGAAGCCCGCGCTGGC
CTGCGTCGTCGGGTCCAAGGCCTGCCCCAAGATCGCCAACTGGACTCCCATGGATTACCTCCAGCATGATCTCACGCCAA
TACAGGTTTGCATTTCACCTACTGCT-CATTTTCTTCCATATTTGCTCCTCTTGCTATTTGTCTCCACTGCTTTCAGCAC
TTGTAGTTGTAGTACAACAGAACTGATAATCTCAACTATAGCCGCCCGGCACAAACATAACAAATTGTCAAAGAAATGGA
AACATAAAAAATAGCTAAACAATGAATTGATCCAGTTCACCAGTTGCATCTATGTAAATTTAAATACCTCAAGCACAGGT
TTATGTTCATTGTCTATTTGGACAAAAACATCAAATTTATTGGCCACCAAGATTCAAAACCCAGTAAAGAGTGTGACCTC
AGGACAAATTTTGAACCCATTTTCAGATAAACTAAACAAACTAGGTCTAGTCAATCTCTAGCTCAGAGCATCTTCAGTGC
TCCTGCACCTCTGCTACTTTAATACAAGTTGTAGTTCTAACTAATAGCTTTGCTTCTAAAATTACTAATGGAACTATGCA
CTATCATGCAGTCTGGGTGCTGCAAGCCGCCAACATCATGCGCATACAGTGGGGGGATGCCGGTCGGAGCGCAGGATGAG
GACTGCTACCAGTGGAACAATGCCCCAAACATCCTATGCTACCAGTGTAACTCGTGCAAGGCCGGCGTGATGGAGCAGGT
GCGCCAGGACTGGCACAAGATCTCCGTGCTAAACGTCATCGTGCTCGTCTTCCTCATCTGCATCTGCGCCTGCGGGTGCT
GCGCCTTCAGAAACGCCCGCCGCTCTGTCTCCGAGTACCCATACGGGGTAAACCGCATGTCCAAGATCAATCCACGCTGG
GACTACTACTGGTACTTTCAGCCAAAAATAAAAA-CAAAATAAAATTGCCACTCCATTTCTGTTTGATTGCTGCTTTTCA
TTGGCATTTGTTTTCTTTTCAGATGTTTGGTTTCAGCCCCAAAAATGCATTTC--CA--GTGTCATGATTAAAGCGAAAA
AATGGATTAGTTTATTTCTGAATAATTTCTGAATAGTGCTTATTCAACAGAAANNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAACGAAATTCTTTG--
-----------------------------------------------------------------CACACAT-AAAAAAG
TAATGATGATACTGGCAATATAACACAGTTTCTGTTTGTGGCCATCTATTTGCTCTGATTTCTCTAACACTGCTTTATGG
TTTTTGCTACAGGTGGCGATGGTTCCGCGATAGGAGGGAACAGATGTACTAGGCTAGCCATCGGAACTCACCTCATGTAT
AATATTTTCTTGATGGTCAATGGCCGAGGGGTTGGGTCAGTTCTTCATAGCACTCTGGTAGTGACCAATAATTAATCTTC
TGTAGATATTCAGTATGAGGAAAGTACAAGATGGTGAAGTGGAAGGCATGTGTAGTTTATCCAGTATTGGT---AGAATG
CTTTGCATTTTGAAGCATATTTAGTTAGAGAATTCAGAAGAGAAGAGATTTCTTGTCTATGGTGGGAAATCCAGTCTA-T
ATATATATGACCATATCAGCACATGTACTGTTGGTGTGACTTCTATTTGCCATGTTTTGGTCATGCCTACCTTCTGATAT
GATATCAGTAGACCCATAGACTACAGCTAAATCTAAGACAGGCTCTCCATCTTTAGCACTCATGGCATGGACCGTCGTAT
TTTGAAGTGAGTTGAAAGCACTTTAGATAGTGGATACAGCTCAGCAACCATTCAGAAAGAACTAAGTTCTAACTCAAGGA
--AAATATATATTAATGGGATGCCAAACAAATGAGAAAAAATCAAATAATTTTATCACA--AAAAAGTGCAGTGATCATC
TACAGTTTGTATTGGTTACAAGAGCATATATCCCCATTAACCTTTCTCCACTATGGTAGCCAAAGTGCTTTACATTTCTT
TTAGTACATATCTAGTTGGTGAGTTCGAAAGAAAAGTGATGTCATGTCTATCGAGTAAAACCCAC--AGAGTCAGCTATA
TGACTACATCAGCACATGTACTGTTGGTCTGACTTCTATAGTTGTCATGTTTTGGCCTGTCTACCTTCTGATATGATTAT
CCCTAAACTGAGGCT--AAACCTAAGACAGGCTCTCCAACTTCAGCACCCATGGACCATGGTATTTTTTTTTATGTGGTT
GTCTGGTAAGGAAAGGCTTTACAGCTCAGCAATATTTCAGAAGGCGCTTCTAATTCAAGGCAGAATAATGTAACGATAAG
ACAAACTCCTGATAAGAACGAAATAACTGTATCACAAGCAATGTGCAGT
>SNPs
--------------------------------S---------------------------------------S-------
--------------------------------------------------------------------------------
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------------------------
------------------------------------------------------------S-------------------
------------------------S-S---SSSSSSSS-S-SSS--S-SSSSSSSSSSS---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
SS--------------------------S--S-------------------------------S---S--------S---
--------------------------S-----------------------------------------------------
--------------------------------------------------------------------------------
------------S------------------------------------------------S------------------
--------------------------------------------------------------------------------
------------------------------------------------------S-------------------------
-------S---SS-------------------------------------------------------------------
------------------------------------S--S--SSS-SS--------------------------------
----------------------------------S-----------------------------S--------------S
--------------------------------------------------------------------------------
---------S----------------------------------------------------------------------
-------------------------------------------------------------------S------------
--------------------------------------------------------------------------------
------------S-------------------------------------------------------------------
-----------------------------------------S---------------------S-----S----------
------------------------S----------S--------------------------------------------
-----------------S----S---------------------------------------------------------
----------------------------------------------------------------------S--------S
-------------S------------------------------------------------------------------
----------------------------------------------------------------------------SS--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
----------------------------------------------------------------------S---------
--------------------------------------------------------------------------------
---------S-------------------------------------------SS--------------S----------
----------------------------------------S------------SSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------S------------S-----------S-------S
----S---------------------------------------------------------------------------
----------------S---------------------------------------------------------------
-------------------------S------------------------------------------------------
--------S----------S------------------------------------------------------------
------------------------------------------------S-------------------------------
------------------------S------------------------------------------------------S
-----------------S-------------------------------------------S------------S-----
SS-------------------------------S----------------------------------------------
---------------S------------------SS-----------------------S--------------------
----------------------------------------------------S-----------S---------------
S-------------------------------------------------------------------------------
-------------------------------------------------------------S------------------
---------------------------------------------S--S--------------------------S----
---------------------------------------------S---
>forward_549
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------CTGTGGACTGGCTGAGCTTC-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
>reverse_2158
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------TCA
CTATCATGCAGTCTGGGTG-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
>forward_1048
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------AGCCAAGAACA
CCGTAGCC------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
>reverse_2699
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------GGCGGGGTGTTCCTTCTATT--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
>forward_1052
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------AAGAACA
CCGTAGCCAGCC--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
>reverse_2740
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------CATGCTTCGGTGCTTCTTCA-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
>forward_2718
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------GGCGGGGTGTTCCTTCTATT--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
>reverse_4062
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------CAAGGAAACACTTTACAGC
TCAGC---------------------------------------------------------------------------
-------------------------------------------------
