>input_sequence_44438
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------ATGGCAGCCGCTGGAGTTAGC
AGGGAGCAGAGGTGGAGCCTCGCCGGCGCAACCGCGCTGGTCACCGGAGGCAGCAGAGGAATTGGGTAC---------GT
ACATACACATGCTGCATTCAAGGAGCAAATTTCGTACTACGCTGCATGCTACTAACTGGCATCAGACGACAGACATGCAA
TTGTGGAGGAGCTTGTCGGGCTCGGGGCGCGGGTGCACACGTGCTCCGAGAACGCGGTGGAGCTGGAGGGGTGCCGTCGG
CGGTGGGAGGAGATGAAGCTTCCGGTCACCGTCTCCGTCTGCGACGTCTCCGTGCGAGCCGAGAGGGAGAAGCTCATGGA
GTCGGCGAAGCAAACCTTCGACGGCAAGCTCGACATACTAGTAAGATTAGTCTGTTCGATC-----AAGTCAATTCC---
-----GTTACTCTTTTCTCAGTGATCTGCTATTAAGGTAGGTCAATTTTCAGCTCGGATTGTTTTGCACCAACTCTATGC
ATGCAGGTAAACAACGTGGGACGGAATGTGGCCAAGGCGACCGTGGAGTGCACGGCGGAGGAGTACTCGCATCTCATGTC
GACTAACTTAGAGTCGGCGTTCCACCTAAGCCAGCTCGCACACCCCTTTCTCCGAGACGCCTCCATCGCCGGAGGAGGCA
GCGTCGTTAACATCTCCTCAGTTGCAAGCTCACTTGGCTACTCCACCCTCGCACTGTACTGCATATCTAAAGGTATGCAA
ACCAAGGTTCTTGATTTTTAGT------ATATGTTTACCGTACACGCAAGTTCTTACTTGATGCAGGCACATACCAA-CC
TTTTTGAC--GAAAAAAAAGGTGAACCTGGTCTGTGCATCGTTGCGACGCACATGGCTATTTTTATTAGCAAATCAGGGA
CACTTAATTTGGGAATTGGGATGGACGGAGTAGTATCAAAGCTATTTTTATTAGCAAATCAGCGACACTTAATTTGGGGA
TTGGGATGGAGA--GAGTAGTATCAAAGCTATTTTCATTAGCAAATCAGCGACACTT-AATTTAGGAATTGGGATGGAGA
G--TGTGGTATCAAAACTATTTTTATTAGTAAACCAGCGACACTTAATTTGGGGATTGGGATGGAGAGAGTAGTATCAAA
GTATCTGGTGATGTAGGACTTAAAATCAATACTTACATAAGTGACGCACTACGATATGGATA------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------TCTAAATCTCTAAAGTCGAACTAAGGTGCAAAAATTACTTCCATCGATGTTATTAATATATTATGTCA
AACATGCAGGAGGAGTTAACCAGCTTACAAGGAGCCTTGCTGCCGAGTGGGCTCAAGATAAGATCCGTGTCAACTCCGTC
GCTCCGGGTGGGATCAATACCGAGCTGCAAAACAGTGTACGCACCGACCGCACATGAAAAACAAAAAAGGAATTTAAGAA
ATGCACAAGCCTAAATATTTTACGTAATTAATTTGAACAAAAGTTGTTATAAT-GGGACATTTTTAGTGTGCTCTTCTAC
TTTTT---------------CCCCCTCAAAATTCAGCTTCTACCTTTTGTATTTTTTACCTTGCCTGGTAGAAAGTTAAC
AAGTAATATCTGTTGGATCGAATTTAACAGGTGGATCCAAAGGTCATAGAAAATACGTTGTTGAGAACTCCGATGCATCG
GCTCGGTGAGCCAGTGGAGGTGGCGTCGATGGTGTCGTTCCTTTGCATGCCAGCAGCTTCGTTCGTCACCGGCCAGGTTA
TGTACGTCGATGGAGGCCGAACCATTAGTGGCTAA---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------
>chr5D_1_TraesCS5D01G037500
ATCAGATTTAATTTGTGCAATTGGCGAGTACAATAGGATTGACAACTCTCTGCCCGCGTTGGGTGCAAGCATTTGCTTTG
TATGTCTGCTGGTATCGCTTATCTTGTTTGTGTGGTGTCTCCTACTGGTTCGATAAACCTTGATTCTTAACTGAGGAAAA
TACTATATGCTGCTATACTACATCACTCTTTCTCTTCGGGGAAATCGCAACGCCTATCACAAGTAGCAAGCAGCAGACGT
CTACGCGCATCACATGAGACATCCTCCGCGAGCGATGGCGGCTGTGCGTCATGCGGGCTAAGAGAGACGCCATGTTTGCG
GAGCTCGACGTGAAGGCGGATGAAAAAGAGGCGCATGCGACTGCGTCCGTCACCAGCTCCACGTCGGTCACGCCGCCCCG
CGGACTCGGACGAGGAAGAGTAAGACATGGGCTGTGAGCACGCCTGATGTCCCATGTGGGTGGTACTCCACGTCTTATTC
TTTCCCTCCGGTAGTTTCACTTCCCGGGGCTCTCGGCCGGTGAGCTTGCCGGACATGGAAAAGACAGGATGTGGGACACC
GACACTGCCATGACCGGCGAACATTTAGGCTAGGTTAAAAAAGTGTCATCCGTTTTGTTTAGTTGAAATATGTTGAAAAT
GTAATAAATTTGATGCGGTTTAAATGAAAATAGTCCGTTTACATATAGTTTGTTA-------------------------
----------------------------------------------------------TATTTGTTTAAATTCATTTGAA
AT--GTGTCTAATGTTGGATGGACAGCTCTGAACGCCTCCACGGACAGATACCGACATACCGTGTGCAGTCCCCGTTTTA
GATGCCCTAGGATCCAAATAGCCGATGGGACGTCCTACATGTGGGACGCGTGTGTCGGTGGCAGGAATTGAACGTACGGA
CGAGATCACTCCGACGTGGCCTGTGTAATCTTCAAATAAGAGAGAAAGTGACACCACACAATCACACACACACACACAC-
-------------AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATGGCAGCCGCTGGAGTTAGC
AGGGAGCAGAGGTGGAGCCTCGCCGGCGCAACCGCGCTGGTCACCGGAGGCAGCAGAGGAATTGGGTAC---------GT
ACATACACATGCTGCATTCAAGGAGCAAATTTCGTACTACGCTGCATGCTACTAACTGGCATCAGACGACAGACATGCAA
TTGTGGAGGAGCTTGTCGGGCTCGGGGCGCGGGTGCACACGTGCTCCGAGAACGCGGTGGAGCTGGAGGGGTGCCGTCGG
CGGTGGGAGGAGATGAAGCTTCCGGTCACCGTCTCCGTCTGCGACGTCTCCGTGCGAGCCGAGAGGGAGAAGCTCATGGA
GTCGGCGAAGCAAACCTTCGACGGCAAGCTCGACATACTAGTAAGATTAGTCTGTTCGATC-----AAGTCAATTCC---
-----GTTACTCTTTTCTCAGTGATCTGCTATTAAGGTAGGTCAATTTTCAGCTCGGATTGTTTTGCACCAACTCTATGC
ATGCAGGTAAACAACGTGGGACGGAATGTGGCCAAGGCGACCGTGGAGTGCACGGCGGAGGAGTACTCGCATCTCATGTC
GACTAACTTAGAGTCGGCGTTCCACCTAAGCCAGCTCGCACACCCCTTTCTCCGAGACGCCTCCATCGCCGGAGGAGGCA
GCGTCGTTAACATCTCCTCAGTTGCAAGCTCACTTGGCTACTCCACCCTCGCACTGTACTGCATATCTAAAGGTATGCAA
ACCAAGGTTCTTGATTTTTAGT------ATATGTTTACCGTACACGCAAGTTCTTACTTGATGCAGGCACATACCAA-CC
TTTTTGAC--GAAAAAAAAGGTGAACCTGGTCTGTGCATCGTTGCGACGCACATGGCTATTTTTATTAGCAAATCAGGGA
CACTTAATTTGGGAATTGGGATGGACGGAGTAGTATCAAAGCTATTTTTATTAGCAAATCAGCGACACTTAATTTGGGGA
TTGGGATGGAGA--GAGTAGTATCAAAGCTATTTTCATTAGCAAATCAGCGACACTT-AATTTAGGAATTGGGATGGAGA
G--TGTGGTATCAAAACTATTTTTATTAGTAAACCAGCGACACTTAATTTGGGGATTGGGATGGAGAGAGTAGTATCAAA
GTATCTGGTGATGTAGGACTTAAAATCAATACTTACATAAGTGACGCACTACGATATGGATA------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------TCTAAATCTCTAAAGTCGAACTAAGGTGCAAAAATTACTTCCATCGATGTTATTAATATATTATGTCA
AACATGCAGGAGGAGTTAACCAGCTTACAAGGAGCCTTGCTGCCGAGTGGGCTCAAGATAAGATCCGTGTCAACTCCGTC
GCTCCGGGTGGGATCAATACCGAGCTGCAAAACAGTGTACGCACCGACCGCACATGAAAAACAAAAAAGGAATTTAAGAA
ATGCACAAGCCTAAATATTTTACGTAATTAATTTGAACAAAAGTTGTTATAAT-GGGACATTTTTAGTGTGCTCTTCTAC
TTTTT---------------CCCCCTCAAAATTCAGCTTCTACCTTTTGTATTTTTTACCTTGCCTGGTAGAAAGTTAAC
AAGTAATATCTGTTGGATCGAATTTAACAGGTGGATCCAAAGGTCATAGAAAATACGTTGTTGAGAACTCCGATGCATCG
GCTCGGTGAGCCAGTGGAGGTGGCGTCGATGGTGTCGTTCCTTTGCATGCCAGCAGCTTCGTTCGTCACCGGCCAGGTTA
TGTACGTCGATGGAGGCCGAACCATTAGTGGCTAATCAATTATTCCAACCTACTTTAGTAACCATTAAGCTCCTCTCCCG
GTTGATCGGTGCGAACAAAATTAGGTT---TTTGGTTGTGATATGTATTCTAAAAAGGTGGTTGTGAGTTGTGAGCGGTA
AGAAAGTTATTATAAACTTTCAGCTATGGAAAATTTGAAAGTTGTTTGGTTGAGGGACAACCGTGAAACTGGAAGATTTG
GCTATGAATTGGAACACTTCTTTCAAGTTCTT---GCTTAAAATTTCTCCAAAACATTATTTGTCAGCGCCCTTCTTAGT
TAAATAACCTAATGGTTTGTTCCCATTTTCAGCCTCTTATTTGAATATT-CTATGAGTTCCTTCTTATGTGCATCATCCC
ACAATGCCTTCCTAGTCATACTTCAGTCAACAAAAAA-C-AAATTCAAAACAAAAGCATGGCACAACTATCAAAACTACA
TGAACATAACACTACTAGCATTGGATGTTATCCAAACACAAATTCAAACAAAAATTTGTGACCATTTACCCATAGAAACA
TTACCACAAACACATATCAAACACAATCCACTGACACATAGACTTGAACATGCAGTAGAAAGTAGCAATATGCAGCAAGT
ACTAATGAATATGTGCTCGCAATATCCAATCTACTGCTAGTAATGATCCAATACAAAAAGCGAAACAAAGAATGAATGAA
CAGAGAGGGTTGAGATGCAACACGAAGGTTGGAGGGGGAGAGTGAGGAGAGA--------GGGGGTGATGTACCTTGCTG
TGGAAATTAACGGGCTGAAAGGATCGGTATGGTCGACTAGAGGGGGTGAATAGGGGACTAACAATTTTCAACTTCTTTCC
TGAATTTTAGGTTATCAACAAGAAAGTAGGTTGTATTGATATGCAACTAGGTGGACAACCTATATGATGAGCTAAACAAG
ATAACCACAAGACATAATATAAGTAACACAATATTAGTTTGCACAAAGTAAGTGAAGGAAGAATAACCGGCAAGTAGACA
CGACGAGGTTTT
>chr5B_400
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------G
CGGACTCTGACAAGGAAGATTAGGACATGGGCCAGGAGCACGCCTGGTGTCCCATGTGGATGGTGCTCCATGTCTTATTC
TTTCCCTCCCGTAGTTCCAATTCCCGGGGCTCTCGGCCGGTGAGCTTGCGGGACATGAAAAATACAGGACGAGGGACACA
CACACTGCCATGACCGGCGAACATTTAGACTAGGTTTAAAAAGTGTCATCCGTTTTGTTTAGTTGAAATATGTTGAAAAT
GTAAAGAATTTGGCGCGGTTTAAATGAAAATAGTCCATTTACGTGTAATTTGTTTTACTCCCTCTGTCCCATAATGTAAG
ACTCTTTTTGACACTAATACAGTGTCAAAAAACGTCTTACATTATGTGATGGAGAGAGTATTTGTCTAAATTCATTTGAA
ATATGTGTCTAATGTTGGATGGACAGCTCTGAACGCCTCCACGGACGGG--------TACAGTGTGCAGTCCGCGTTTTA
GA---------------------------------TGCATGTGGGACGCGTGTGTCGGTGGCAGGAATTGAACGAACGGA
GGAGGTCACTCCAACGTGGCCTGTGTAATCTTCAAATAAGAGAGAACGTGACACCACACAATCAGACACGCACACACACA
ATCAGAGAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATGGCAGCCGCTGGAGTTAAC
AGGGAGCAGAGGTGGAGCCTCGCCGGCGCAACCGCGCTGGTCACCGGAGGCAGCAGAGGAATTGGGTAC---------GT
ACATACACATGCTGCATTCAAGGAGCAAATTTCGTACTACGCTGCATGCTGCTAACTGGCATCAGACGACAGGCATGCAA
TCGTGGAGGAGCTTGTCGGGCTCGGGGCGCGGGTGCACACGTGCTCCGAGAACGCGGCGGAGCTGGAGGAGAGCCGCCGG
CGGTGGGAGGAGATGAAGCTGCCGGTCACCGTCTCCGTCTGCGACGTCTCCGTGCGAGCAGAGAGGGAGAAGCTCATAGA
GACGGCGACGCAGACCTTCGACGGCAAGCTCGACATACTAGTAAGATTAGTCTGTCTGTTCGATCAAAGTCAATTCACGT
AATCTGTTACTGTTTTCTCAGTTATCTACTG---AGGTAGGTCAATTTTCAGCTCGGGTTATTTTGCACCAACTCT----
ATGTAGGTAAACAACGTGGGACGGAATCTGGCCAAGGCGTCGGTGGAGTGCACGGCGGAGGAGTACTCGCATCTCATGTC
GACAAACTTAGAGGCGGCGTTCCACCTAAGCCAGCTCGCACACCCCTTCCTCCGAGACGCCTCCGTCGCCGGAGGAGGCA
GCATCGTTAACATCTCCTCGGTTGCAAGCTCACTTGGCTACTCGACCCTCGCAGTATACTGCATATCTAAAGGTATGCCA
ACCAAGGTTCTTGATTTT---T------ATATGTTTACCGTACACGCAAGTTCTTACTTGATGCAGCCACATACCAACCC
TTTTTTAC--GAAAAAAAAGGTGAACCTGGTCTGTGCATCGTTGCGACGCACACGGCTATTTTTATTAGCAAACCAGCGG
CACTTAATTTGGAAATTGGGATGAAGAGCATAGTATCAAAGCTATTTTTATTAGCAAATCAGCGACGCTTAATTTGGAAA
TTGGGATGAAGA--GAGTAGTATCAAAGCTATTTTTCTTAGCAAATCAGCGACACTTTAATTTGGGAATCGGGAGGGAGA
GAGTA--GTATCAAAGCTATTTTTATTAGCAAATCAGCGACACTTAATTTGGGAATTGGGATGGAGAGAGTAGTATCAAA
GTATCTGGTGATGCAGGACTTAAAATCAATACTTACATAAGTGACGCACTACGATAGTGATAA-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------CTAAATCTCTAAAGTCGAACTAAGGTGCAAAAATTACTTCCATTGATGTTATTAATATATTATGTCA
AACATGCAGGAGGAGTTAATCAGCTTACAAGGAGCCTTGCTGCGGAGTGGGCTCAAGACAAGATCCGTGTCAACTCCGTC
GCTCCGGGTGGGATCAATACCGAGCTGCAAAAGAGTGTACGCACCGACCCCACATGAAAAAGATAAAGGAAATTTAAGAA
ATGCACAAGCCTAAATATTTCACCTAACTAATTTGAGCAAATAAGTCGTTATAAGGGACATTTTTTATATGCTCTTCTAC
TTTTTTTT----------------CTCAGAATTTAACTTTTACTTTTAATATTTGCTATCTTGCCTGGCAAAACGATAAC
AAGTGATATATGTTGGATCAAACTTAACAGGTGGATCCGGAGATTGTAGAAAATACGTTGTCAAGAACTCCGATGCATAG
GCTCGGTGAGCCAGTGGAGGTGGCATCAATGGTGTCGTTCCTGTGCATGCCAGCAGCTTCCTACGTCACCGGCCAGGTCA
TCTATGTCGATGGAGGCCGAACCATCAGCGGCTAATTAATTATTCCAAGCTACTTTAGTAACCATTAAGCTCCTCTCCCG
GTTGATAAGTGAGAATAAAATTAGGTTGTGTTTGGTTCTGATATGTATTCTAAAAAAATTGTTGTGACTTGTGAGCGGTA
AGAAAGTTATTATAAACTTTCAGCTATGGAAAAGCTGAAAGTTGTTTGGTTGAGAGACAACCGTGAAATTGT-AGATTTG
GCTGTGAATTGGAACACTTCTTTCAAG---TT---GCTTAAAATTTCTCCAAAACATTATTTTCAA---CCATTCTTAGT
GAAATAACCTAATGGTCTGTTCCCATTTTCAGCCTCTTATTTGAATATTTCTATGAGTTCCTTCATATGTGCATCATTCC
ACAGCGCCTTCTCAGTCATACTTCAGTCAAGAAAAAAAC-AAATTCAATACAAGAGTATAGTACAACTATCAAATCTGCA
TGAACATAACACTACTAACACTGGATGCTATCCAAACACGAGTTCAAACAAAAATTA-TGAACATTTACCCATAGAAACA
TTACCACAAACGCATATCAAACACAATTCACTCACATATAAACTTGAACATGTACTAGAAAGTAGCAATATGCAACAAGT
ACTAATGAATATGTGCTCACAATATCCAATCTACTGCTAGTAATGATCCAATACAGAAAACAAAACAA--AATTAATGAA
CAGAGAGGGTTGAGATGCAACACAAAGGATGGAGGGGGCGAGGGAGGTGAGAGAGAGGGGGGGGGTGATGTAACTTGCTG
TAGAAAG----GGGCTGAAAGGATCGGTATGGTCGACTAGAGGGGGTGAATAGCCGACTAACAATTTTTAACTTCTTTCC
TAAATTTTAGGTTATCAACAAGAAAGTAAGTTGTCTAGATA---------------------------------------
--------------------------------------------------------------------------------
------------
>chr5A_805
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------GGATCCAAATAACCGATGGGACGTCCTGCATGTGGGACGCGTGTGTCGGTGGCAGGAATTAAACGTACGGA
CGAGGTCACTCGGACGTGCCGTGTGTAATCTTCAAATAAGAGAGAAAGTGACACCACACAATCAGACACACATACAC---
-------------------------------------------AGAGAGAGAGAGAGAGATGGCAGCCGCTGGAGTTAGC
AGGGAGCAGAGGTGGAGCCTCGCCGGCGCAACCGCGCTGGTCACCGGCGGCAGCAGAGGAATTGGGTACATACGTAACGT
ACATATACATGTTGCATGCA-GGAGCAAATTGCG---TACGCTGCGTGCTGCTAACTGGCATCAGAGGACAGGCATGCAA
TCGTGGAGGAGCTTGTCGGGCTCGGGGCGCGGGTGCACACGTGCTCCGAGAACGCGGCGGAGTTGGAGGAGTGCCGTCGG
CGGTGGGAGGAGACGAAGCTGCCGGTCACCGTCTCCGTCTGCGACGTCTCCGTGCGAGCCGAGAGGGAGAAGCTCATGGA
GACGGCGAAGCAAACCTTCGACGGCAAGCTCGACATACTAGTAAGATTAGTCCGTTCGATC-----AAGTCAATTCACGT
AATCCGTTACCCTTTTCTCAGTAATCTACTATTAAGGTAGGTTAATTTTCAGCTCGGATTATTTTGCACCAACTCTACGC
ATGCAGGTAAACAACGTGGGGCGGAATGTGGCCAAGGCGGCCGTGGAGTGGACGGCGGAGGAGTACTCGCATCTCATGTC
GACTAACTTGGAGGCGGCGTTCCACCTAAGCCAGCTCGCACACCCCTTCCTCCGAGACGCCTCCATCGCCGGAGGAGGCA
GCGTCGTTAACATCTCCTCGGTTGCGAGCTCACTCGGCTACCCGACCCTCGCACTATATTGCATATCTAAAGGTATGCAA
ACCAAGGTTCTTGATTTT---TACTCCTATATGTTTACCGTACACGCAAGTTCTTACTTGATGCAGCCACATACCAA-CC
TTTTTTTACGGAAAAAAAAGGTGAACCTGGTCTGTGCATCGTTGTGACGCACACGGCTATTTTTATTAGCAAATCAGTGA
CACTTAATTTGGAAATTGGGATGGAAAGAGTAGTATCAAAGCTATTTTTATTAGCAAATCAGCGACACTTCATTTAGGAA
TTGGGAGGGAGAGCGAGTAGTATCAAAGCTATTTTTATTAGCAAACCAGCGACACTT-AATTTAGGAATTGGGAGGGAGA
G--TA--GTATCAAAGCTATTTTTATTAGCAAATCAGCGACACTTAATTTAGGAATTGGGATGGAGAGAGTAGTATCAAA
GTATCTGGTGATGTAGCACTTAAAATCAATACTTACGTAAGTGACGCACTACGATATTGATAACTAGTAAGAGGATGCTT
GGATATGTTTTAGTCCCATGACTAAAAGTAGTGGGACTAAAACTTGCTAGGCTCATTCATGCTTGGATCCAAATACTAAA
GAGACTAAAATTAAGTTATTGAGCATTTATTATCCTTCAAATCCTCCAATCAGAACTCGCATATGTTAAAGGAAAGGAAT
TAAATGAGGAGAGAGAGGGCTAATACATATTTTAGTAGGTTTTATATGACTAAAAATTTTTAGCCTCAAGACTAGTCCTA
GCCTTTCTTTAGTCAGGGGTACTTGGAACCTTAGCCTCTAAAAGAGACTATTTTTAGTCAGACTAAAAATAGTCCCTTGG
ATCCAAACACCCTCTAAATCTCTAAAGTCGAACTAAGGTGCAAAAATTACTTCCATTGATGTTATTAATATCTTATGTCA
AACATGCAGGAGGAGTTAATCAGCTTACAAGGAGCCTTGCTGCCGAGTGGGCTCAAGATAAGATCCGTGTCAACTCCGTC
GCTCCGGGTGGGATCAATACCGAGCTGCAAAACAGTGTACGCACCGACCCCACATGAAAAACATAAAAGGAATTTATGAA
ACGCACAAGCCTAAATATTTTACGTAATTAATTTGAACAAAAGTTGTTATAAT-GGGACATTTTTAGTGTGCTCTTCTAC
TTCCCCCTCCCCCCCCCCTCCCCCCTCAAAATTCAACTTCTACCTTTTGTATTTGTTACCTTGCCTGGTAAAAAGATAAC
AAGTGATATATGTTGGATCGAATTTAACAGGTGGATCCAAAGGTCATAGAAAATACGTTGTTGAGAACTCCGATGCATCG
GCTCGGTGAGCCAGTTGAGGTGGCGTCGATGGTGTCGTTCCTTTGCATGCCAGCAGCTTCATTCCTCACCGGCCAGGTCA
TCTACGTCGATGGGGGCCGAACCATTAGTGGCTAATCAATTATTCCAACCTACTTTAGTAACCGTTAAGCTCCTCTCCCG
GTTGACCGGTGCGAACAAAATTAGGTTGTGTTTGGTTGT------TATTCTAAAAAAGTTATTGTGAGTTGTGAGCGGTA
AGAAAGTTATTATAAACCTTCAGCTATGGAAAAGCTGAAAGTTGTTTGGTTGAGAGACAACCATGAAACTGT-AGATTTG
GTTGTAAATTGGAACACTTCTTTCAAG---TTCTTGCTTAAAATTTCTCAAAAACATTATTCTCAA---CCCTTCTTAGT
TAAATAACCTAATGGTTTGTTCCCATTTTCAGCCTCTTATTTGAATATTTCTATGAGTTCCTTCATATGTGCATCATCCC
TCAACGCCTTCTTAGCCATACTTCAGTCAAGCAAAAAACAAAATTCAATACAAGAGCATAGCACAACTATCAAATCTGCA
TGAACATAACACTACTAGCATTGGATGCTACCGAAACACAAGTTCAAACAAAAATTTGTGAACATTTACCCATAGAAACA
TTACCACAAACACATATCAAACACAATCCACTCACACATA----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-
-------S---S-------S--S---------SSS-----------S------------S----S-----S---------
---------S------S--S-----------------------------S-------S----S------S-S-------S
S---------------------------S-------S-------------------------------------------
----SS------SS----------------------S-----S-S--S------S-------------------------
-----------------------------------------------------------------S--------------
----------------------------------------------S-SSSSSSSSS---S-----------S-------
--SSSSSSS-----------S---------------S-------------------------------------------
----S-----------------------------------------------------------S---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------S---------------------S-------
-S-------------------------------------------------------S-----------S----------
--------------------S-----------------------------------------------------------
-S--------------------------------------------------------------------------S---
----------------------S----S--------------------------------S----------------S--
---------------------------------------S----------------------------------------
-------------S----------------------------------S-------------------------------
-------------------S-----------------------S-----------S------------------------
------------------SSS---------------------------------------------S-------------
-----S-----------------------------------------------S-----------------------S--
------------S------------SS---------------------------------------------------S-
-----------------------------------S--------------------------------------S-----
----SSS--------S-------------S---S-------------------S--------------------------
---------------------------------------------------------S----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------S-----------------------
-------------------S------------------------------------------------------------
-------------------------------------------------S-------------S----------------
--------------------------------------------------------------------------------
-----------------------------------S------------------S---------------S----S----
----S----S----------------------------------------------------------------------
------------------------------------------------------------S-----------------S-
-S------------------------------------------------------------------------------
--------------------------------------------------------S--S--------------------
---------------------------------SS-------------------S----------------SS-------
---S-----------------------SSS--------------------------------SSS-SSS-----------
----------------------------------------------------------------S---------------
----S------S------------------S-----------------S----S-----S--------------S--S--
---------------------------S-------------S-------------------S------------------
--------------------------------S-------S-----------S-S-------------------S-----
------------------S------------------------------------S---S-S------SS---S------
-----------------------S----S---------S---S----S------------------------S-------
-S----SSSSS------------------------------------------SS-------------S-----------
-S--------------------------S-----S-S----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSS
>forward_224
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------TCGCAACGCCTATCACAAGT----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------
>reverse_1598
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------TGC
ATGCAGGTAAACAACGTG--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------
>forward_543
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------GCTTGCCGGACATGGAAAAG-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------
>reverse_2740
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------CCAGCTTACAAGGAGCCTTG-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------
>forward_917
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------ATAGCCGATGGGACGTCCTA-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------
>reverse_3199
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------TA
TGTACGTCGATGGAGGCC--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------
>forward_1381
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-GGTGGGAGGAGATGAAGCTT-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------
>reverse_3337
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------GGTGGTTGTGAGTTGTGAGC----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------
