>input_sequence_44331
--------------------------------------------------------------------------------
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---------------------------------------ATGAAGCCTCCTCCCGCATTGCTGAC------------CCG
CGGCCTCGCTCTTGTCCTGGCCCTCGCATGCGCCGGCATTGCACCGGCGAGCG------GCGGCGGCGCCGGCGGCGGGC
GGTGGGACGTGCTGCAGCGCAGCATCGGCGTGTCGGCGATGCACATGCAGCTCCTGCACAACGACCGCGTCATCATCTTC
GACCGCACCGACTTCGGCCCGTCCAACCTCTCCCTCCCCGACGGCCGCTGCCGCCGCAACCCCAGGGAGCGCGTGCTCCC
CGTCGACTGCACCGCGCACTCCGCCGAGTACGACGTCGCGTCCAACACCTTCCGCCCGCTCTCCGTCTTCACCGACACCT
GGTGCTCCTCGGGCACCGTCGCGCCCGACGGCACCCTCGTCCAGACCGGCGGCTGGAACGACGGCTACCGCAACGTGCGC
GCCATGCGCGCGTGCGACGGCGGAGACGACGACGACGGCGGCAGCTGCGACTGGAACGAGACGCAGGACGCGCTCGCCGC
CAACCGGTGGTACGCCACCAACCAGGTCCTCCCCGACGGCCGCGCCTTCATCGTCGGCGGCCGCAGGCAGTTCAACTACG
AGTTCTTCCCCAAGGCCGATGCTTCCGACGCCTCGGCCATCGCATTGCCGTTCCTGGTTCAAACCAGGGACCCCGAGGAG
AACAATCTGTATCCTTTCGTCCACCTCAACATCGACGGCAACCTTTTCATCTTCGCCAAGAACCGCGCCGTCCTTCTCGA
CTACAGGAAGAACAAGATCGTCCGGACGTACCCCGAGCTGGCCGGCGGCGACCCCAGGAACTACCCCAGCTCGGGCTCGT
CGGTGCTGCTGCCCCTGAAGCCTTCGCCCACCGAGGCCGAGGTGCTGGTCTGCGGCGGCGCGCCCGCGGGCTCCTACAAC
TCGACCAAGGAGAAGACCTTCTTCCCGGCGCTGGTGACGTGCGGGCGGATCAAGATCACGGACGCTTCGCCGGCGTGGGT
GATCGAGAGAATGCCGTCGCCGCGGGTGATGGGGGACATGATCCTGCTGCCCAACGGCGCCGAGGTGGCGATCATCAACG
GCGCCATGGACGGCACCGCCGGGTGGGAGGCCGCCAGCACCCCGGCGTACGCGCCCGTCATGTACCGGCCAGACCACGCG
CCCGGGGACCGGTTCGAGGAGCAGAGCGCGACCGACATCGCGCGGCTGTACCACTCGGCGGCGATCCTCCTCCGCGACGG
CCGGGTGCTGGTCGGCGGGAGCAACCCGCACATCTACTACAACTTCAGCAACGTGCGGTACCCGACAGAGCTCAGCCTGG
AGGCCTTCTCCCCGGAGTACCTGGACAGCTCCAACGACGCCCTCCGCCCAAAGATCACCGACCCCTCGCCCGCCGGCCCG
GCGGTGAGCGTGAAGTACGGACAGTCAATGACCCTCCAGTTCGAGGTGCCAGCGGTGGCTCCGAGAAGGAGACCGCGCGG
CGGGGGCGAGGGCGGCGGCGGCGCTCTCGGCCTGGTGTCGGTGACGATGGTGGCGCCGTCGTTCACGACGCACTCGTTCG
CGATGAACCAGAGGCTGCTGCTCCTGGACGTGGCGGGGACGACGGCGCTGCACAGCACCGCGGGCGCGGGCGCGGGCGCG
TACGAGGCATCGGTGGCGATGCCGGCGAAGGCCGTGCTGGCGCCGCCGGGGTACTACATGGTGTTCGTGGTGAACGGGCA
CATCCCCAGCGAGGGCGTGTGGGTCCACATAGAGTGA-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------
>chr4A_1_TraesCS4A01G085400
GTTGCAAGGGTGGCCATGGATGGGTTGGGATTGTTCAGAAAATAGACATGTTTGGTTATAAAGCACTTGAATGGTTCCAC
TAAAAAGA--AGATAATATGCTCTGAAGATGCTGAACCATTCCACCCTAAGAAATCGGTCGAATCATATGGCCACCCATT
GCATGCATGATCATGTGAGCATGACTGATGATCCCATCCCAAATAATTAATTCATCTCTTATATACAAACAAACACATAA
ATCGAATGGTTCCAT-CCCAAAAAACTGGATGGTTCAAACCCATTCATATGGCACCTCCAACCAAACACATAGGGCTTCG
GGCCAGAAGGAAATCTACTGACCCAAATAAGAGGCCAGTCAAAAAAAGAATGCTCACAGAACAAACAACATAGATAAAGG
AAAAAAATGCAGGACGAATCTCAAAGAAAAATCCAATGGCCACAAAATCGATTGACCCAAAAGTGAAATTTCAGCTGACT
GAAAACGTAGGTAAATTGTACTTTCTCCGTTCTAAATTACTCGTCGTGGTC-----------------------------
-----------------------------GAAGAGTTCGCATGAACCTATGGTTCTTCTATCC--AGAGGATTTTGGTAC
GGGTCATGGGGGGAGAGACTGAGCAACACAATT-AGCAGGTGGTAGCTGGTCAAATCATGAAAAGATGGTGATGACTGAT
TGACTGCACCGTTTATTATGCCCAACGGGCCGCCAAATCAAAACATCATAAACAGCAAGTTAATACAGGCCCGAGCCCCA
AAATCAACGCCAGAATCAAACCAT-----CCTGCTGGCAGAAATAATGGCCGCGCGCGACTCCTCGCTGAACGAAATCCG
GAGCCTTAAGACGCCATCACCAACGAAGCTCGTCAATAC-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------TACTGTACCGTATCGTTGGTCCGTGCATTGCATATA
AGGGCGGCCACCGTCACGAGCTCAGATCCAT----ACAG-CAGCCTTCGCTGCCCACGAGCCAAACATTCGGATACAGTC
AACCACCATACGGACAAGGCCTGATCGTCACGAGCGACCATGAAGCCTCCTCCCGCATTGCTGAC------------CCG
CGGCCTCGCTCTTGTCCTGGCCCTCGCATGCGCCGGCATTGCACCGGCGAGCG------GCGGCGGCGCCGGCGGCGGGC
GGTGGGACGTGCTGCAGCGCAGCATCGGCGTGTCGGCGATGCACATGCAGCTCCTGCACAACGACCGCGTCATCATCTTC
GACCGCACCGACTTCGGCCCGTCCAACCTCTCCCTCCCCGACGGCCGCTGCCGCCGCAACCCCAGGGAGCGCGTGCTCCC
CGTCGACTGCACCGCGCACTCCGCCGAGTACGACGTCGCGTCCAACACCTTCCGCCCGCTCTCCGTCTTCACCGACACCT
GGTGCTCCTCGGGCACCGTCGCGCCCGACGGCACCCTCGTCCAGACCGGCGGCTGGAACGACGGCTACCGCAACGTGCGC
GCCATGCGCGCGTGCGACGGCGGAGACGACGACGACGGCGGCAGCTGCGACTGGAACGAGACGCAGGACGCGCTCGCCGC
CAACCGGTGGTACGCCACCAACCAGGTCCTCCCCGACGGCCGCGCCTTCATCGTCGGCGGCCGCAGGCAGTTCAACTACG
AGTTCTTCCCCAAGGCCGATGCTTCCGACGCCTCGGCCATCGCATTGCCGTTCCTGGTTCAAACCAGGGACCCCGAGGAG
AACAATCTGTATCCTTTCGTCCACCTCAACATCGACGGCAACCTTTTCATCTTCGCCAAGAACCGCGCCGTCCTTCTCGA
CTACAGGAAGAACAAGATCGTCCGGACGTACCCCGAGCTGGCCGGCGGCGACCCCAGGAACTACCCCAGCTCGGGCTCGT
CGGTGCTGCTGCCCCTGAAGCCTTCGCCCACCGAGGCCGAGGTGCTGGTCTGCGGCGGCGCGCCCGCGGGCTCCTACAAC
TCGACCAAGGAGAAGACCTTCTTCCCGGCGCTGGTGACGTGCGGGCGGATCAAGATCACGGACGCTTCGCCGGCGTGGGT
GATCGAGAGAATGCCGTCGCCGCGGGTGATGGGGGACATGATCCTGCTGCCCAACGGCGCCGAGGTGGCGATCATCAACG
GCGCCATGGACGGCACCGCCGGGTGGGAGGCCGCCAGCACCCCGGCGTACGCGCCCGTCATGTACCGGCCAGACCACGCG
CCCGGGGACCGGTTCGAGGAGCAGAGCGCGACCGACATCGCGCGGCTGTACCACTCGGCGGCGATCCTCCTCCGCGACGG
CCGGGTGCTGGTCGGCGGGAGCAACCCGCACATCTACTACAACTTCAGCAACGTGCGGTACCCGACAGAGCTCAGCCTGG
AGGCCTTCTCCCCGGAGTACCTGGACAGCTCCAACGACGCCCTCCGCCCAAAGATCACCGACCCCTCGCCCGCCGGCCCG
GCGGTGAGCGTGAAGTACGGACAGTCAATGACCCTCCAGTTCGAGGTGCCAGCGGTGGCTCCGAGAAGGAGACCGCGCGG
CGGGGGCGAGGGCGGCGGCGGCGCTCTCGGCCTGGTGTCGGTGACGATGGTGGCGCCGTCGTTCACGACGCACTCGTTCG
CGATGAACCAGAGGCTGCTGCTCCTGGACGTGGCGGGGACGACGGCGCTGCACAGCACCGCGGGCGCGGGCGCGGGCGCG
TACGAGGCATCGGTGGCGATGCCGGCGAAGGCCGTGCTGGCGCCGCCGGGGTACTACATGGTGTTCGTGGTGAACGGGCA
CATCCCCAGCGAGGGCGTGTGGGTCCACATAGAGTGACGCGACGCCGGCGACGGCGGCATGCATCGGCATGCATCATGTA
TAGCACGACCCGATTGTTTTGTTCTCT--TGTCTTGTCTCGTGTGGTTTTTGTCGTCACCACGCACGAATGTGAGGTGAT
GCCGTGACTTGGTTCGTTGTTCAGTTGTACCGTGCGTGCGTGCGTGCTTGGCGACGCCCGATCGAGTCGGGC----AGGA
CAGAGAGAGCGGAAGGCGAAGAATGTGTG--------------------------T----------------------GA
GAGTGAGGCTAGATTCACGTGAACCGGCCGGGTTGAGGGGCACACGTGACGCTCCCTAGACGCATCTGCT------CCTG
GCCCTGGCTGGCCTAGGTGCATTTGGTGGATACA-------------------------TCGAAGG--------------
-------TGTCGCGATCCAGCCGGTTGTTGGCGGCGTTCCTTCCTTCCTTCTCTGGGAGAGACCGGCGGCTTCAGAGCTG
AGAACGCGCGCCGTTGGCGTGCGCGCGCGGGGGTGACGGCCGGGATGGTTGCGGTTGCGGCCGGTGGCCTGGGGCGTCAC
GGGATGT----CGCGGCGGTTGGGAAGTGCGGACGTGCAGTCAGCTTGGTACTGCCGAGTAAGAGCAAGTAATAAGGCTC
ACTCAGCTGGCTATAAGCCCTTCCACGTCAGCCAAATCACATCTGGAGGGAAGAGAAAGAGGGAGAGAGAAGCGAACGGG
CGCTTCGTCAAGCGCCGGGCTGCGGCACAAGATACGAGAGCTTTGCGCCCGCTTGCAGCCCGTGGCGAGCGCTAGAGCCG
GCGCTCTCGACCCCCTGCGCCTCTCCCGCCTCTCGCGCTTCTCCTTCCTCCTTCGCGCGCAAAAATCAGCTCGTGCCGTC
GCCCCAAATAGCTTCCTCGCGCCAAATCAAGCCTTCCAAATTTCCCCAAATCGCCACCTCTCCCGAACCCTAAAATTGTC
GCCGACGCACATCAAGGAGATGGGTTAGCAGTCCAAACAGACGCGCGCGCCGGCACCTCGTGAAGCCCCTCCACCAGCGC
CTCTGCTCACCCCGCCGCCAGCGCATC
>chr4A_2
-TTGCAAGGGTGGCCATGGATGGGTTGGGATCGTTCAAAAAATAGACATGTTTGGTTATAAAGCACTTGAATGGTTCCAC
TAAAAAAGATAGATAATATGCTCTGAAGATGCTGAACCATCCCACCCTAAGAAATTGGTCGAATCATATGGTCACCCATT
GCATGCATGATCATGTGAGCATGACTGATGGTCCTATCCCAAATAATTAGCTCAGCTCTTATATACAGCCAAAAACATGA
ATCGAATGGTTCCATCCCCAAAAAACTGGATGGTCCAAACCCATTCATATGGTACCTTCAACCAAACGCATAGGGCTTCG
GGCCAGAAGGAAATCGACCGACCCAAATAAGTGGCCAGTCAG-AAAAGAAAGCTCACAGAATAAACAACACAGATC-AGG
AAAAAAATGCAGGACGAATCTCAGAGAAAAATCCAATGGCCACAAAATCGATTGACCCAAA-GTGAAATTTCAGCTGACT
GAAA-CGTAGGTAAATTGTACTCCCTCCGTTCCAAATTACTCGTCGTGGTTTTAGTTCAAATTTGAACTAAAACCACGAC
GAGTATTTTGGTATGGAGGGAGTAAAAATGAAGGGTTCGCATGAACCTATGGTTCTTCTATCTGTAGAGGATTTTGGTAC
CGGTCATG-GGGGAGGGACTGAGCAACACAATT-AGCAGGTGGTAGCTGGTCAAATCATGAAAAGATGGTGATGGCTGAT
TGACTACGCCGTTTATGCTCAACGGGTCGAA--AAAATCAAAACATCATAAACATCCAGTTAATACAGGATCGAGCCCCA
AAATCAATGCAAGAATCAAACCAT-----CCTG---GCAAAATTAATGGC----CGCGACTCCTCGCCAAACAAAATCCG
GAGCCTTAAGACGCCATCACCAACGAAGATCGTCAATAC-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------T---GTGCTATATCGTTGGTCCGTGCATTGCATAAA
AGGGCGGCCACTGGCACGAGCTCAGATCCAT----CCATACAGCCTTCGCCGCCCACGAGCCAAACATTCGGATACAGTC
AACCACCATACAGACAAGGCTTGATCGTCACGGGCGACCATGAAGCCTCCTCCTGCATTGCCGACCCGGAGCCGTATCCG
CGGCCTCGCTCTTGTCCTGGCCCTCGCCTGCGCCGGCATTGCACCGGCGAGCG------GCGA------TGGCGG---GC
GGTGGG--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------
>chr4B_576
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------AC
GGGTCATT-GGGGAGGGACTGAGCAACACAATTAAGCAGGTGGTAGCTGGTCAAATCATGAAAAGATGGTGATGACTGAT
TGACTGCACCGT------------------CGCAAAATCAAAACATCATAAACAGCAAGTTAATACAGGACCCAGCCCCA
AAATCAATGTCAGAATCAAACCAT-----CCTGC---CAAAAATAATGGC----CGCGACTCCTCGCTGAACGGAATCCG
GAGCCTTAAGACGCCATCACCAACGAAGATCGTCAATAC-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------T---GTACTGTATCGTTGGTCCGTGCAT-----ATA
AGGGCGGCCACTGTCACGAGCACAGATCCAT----ACAG-C---CTTCGCTGCCCACGAGCCAAACATTCGGATACAGTC
AACCACCATACGGACAAGGCCTGATCGTCACGGGCGACCATGAAGCCTCCT---GCATTGCC------------TATCCG
CGACCTCGTTCTTGTCCTGGCCCTCGCCTGCGCCGGCATTGCACCGGCGACGGCAGAGAGCGG------CGGCGGCGGTC
GGTGGGACGTACTGCAGCGCAGCATCGGCGTGTCGGCGATGCACATGCAGCTCCTGCACAACGACCGCGTCATCATCTTC
GACCGCACCGACTTCGGGCAGTCCAACCTCTCCCTCCCCGACGGCCGCTGCCGCCGCAACCCCAGGGAGCGCGTGCTCCC
CGTCGACTGCACCGCGCACTCCGCCGAGTACGACGTCGCGTCCAACACGTTCCGCCCGCTCACCGTCTTCACCGACACCT
GGTGCTCCTCGGGCACCGTCGCGCCTGACGGCACCCTCGTCCAGACCGGCGGGTGGAACGACGGGTACCGCAACGTGCGC
GCCATGCGCGCGTGCGACGGCGGAG---ACGACGACGGCGGCAGCTGCGACTGGAACGAGACGCAGGACGCGCTCGCCGC
GAACCGGTGGTACGCCACCAACCAGATCCTCCCCGACGGCCGTGCCTTCATCGTCGGCGGCCGCAGGCAGTTCAACTACG
AGTTCTTCCCCAAGGCGGATGCTTCCGACGCCTCGGCCATCGCATTGCCGTTCCTGGTTCAAACTAAGGACCCAGAGGAG
AACAATCTGTATCCTTTCGTCCACCTGAACATCGATGGCAACCTTTTCATCTTTGCCAAGAACCGTGCCGTGCTTCTCGA
CTACAAGAAGAACAAGATCGTCCGGACGTACCCTGAGCTGGCCGGCGGCGACCCCAGGAACTACCCCAGCTCGGGCTCGT
CGGTGCTGCTGCCCCTGAAGCCGTCGCCCACCGAGGCCGAGGTGCTGGTCTGCGGCGGCGCGCCCGCGGGCTCCTACAAC
TCGACCAAGGAGAAGACCTTCTTCCCGGCGCTGGTGACCTGCGGGCGGATCAAGATCACGGACGCTTCACCGGCGTGGGT
GATCGAGAGAATGCCGTCGCCGCGGGTGATGGGGGACATGATCCTGCTGCCAAACGGCGCCGAGGTGGCGATCATCAACG
GCGCCATGGACGGCAGCGCCGGGTGGGAGGCCGCCAACACCCCGGCCTACGCACCCGTCATGTACCGGCCAGACCACGCG
CCCGGGGACCGGTTCGAGGAGCAGAGCTCGACCGACATCGCGCGGCTGTACCACTCGTCAGCGATCCTCCTCCGCGATGG
CCGGCTGCTGGTCGGCGGGAGCAACCCGCACATCTACTACAATTTCAGCAACGTGCAGTACCCGACAGAGCTCAGCCTGG
AGGCCTTCTCGCCGGAGTACCTGGACAGCTCCAACGACGCCCTCCGCCCAAAGATCACTGACCCCTCGCCGGCCGGCCCG
CCGGTGAGCGTGAATTACGGCGACTCGATGACCCTGCAGTTCGAGGTGCCAGCGGTCGCGCCGCGAAGGAGACCGCGCGG
CGGGGGCGACGGCGGCCTCGGTGCTCTCGGCCTCGTGTCGGTGACGATGGTGGCGCCGTCGTTCACGACGCACTCGTTCG
GGATGAACCAGAGGCTGCTGTTCCTGGACGTGGCGGAGACGACGGCGTTGCACAGT---------------GCGGGCGCG
TACGAGGCGTCGGTGGTGATGCCGGCGACGGCCGTCCTGGCGCCGCCGGGGTACTACATGGTGTTCGTGGTGAACGGGCA
CATCCCCAGCGAGGGGGTGTGGGTCCACATAGAGTGACGGCGATGCATGGCG--------GCATCGGCATGCATCATGTA
TAGCACGACCCGATTGTTTTGTTCTCTTCTCTTGTGATA------------------------------------GTGAT
ACCGTGACTTGTTTGTT------GTTCTA--------GCGTGCGTGCTTGGCGACGTCCGATCGAGTCGGAC----AGGA
CAGAGAGAGCGAAAGGCGAAGAATGTCTG--------------------------TGAAAAAAGTGCTCGGCTCAGCGGA
GAGTGAGGCTAGATTCACGTGAACCGGACGGGTGTCGCCGCACACGTGACGCTCCCTAGACGCGTCTGCT------C---
-------CTGGCCTAGGTGCATTTGGTGGATAGTACATCTCGTAGGTGGACAAAATTGGTGCTGCTGCATCGAAGTGGCA
TGGCCGCTGTCGCGATCCAGCCGGTTGTTGGCGGCGTTCCTTCA--------CTGGGAGAGACCGGCGGCTTCAGCGCTG
AGAACGCGCGCCGTTCGCGTGTGCGCCC-GGGGTGACGGCCGGGATGGTTGCGGTTGCGGCCGGTGGGCTGGGACGTCAC
GGGAATGATTACGCGGCGGTTGGGAAGTGCGGACGTGCAGT---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------
>chr4D_578
GGGT----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---TCATG-GAGGAGAGACTGAGCAACACAATT-AGCAGGTGGTAGCTGGTCAAATCATGAAAAGATGGTGATGGCTGAT
TGACTGCGCCGT---TTATACCCAACGGGCCGCAAAATCAAAATATCATAAATAGCATGTTAATACAGGACCGAGCCCCA
AAATCAATGTCAGAATCAAACCATGCATTCCTG---GCAAAAATAATGAA----CGCGGCTCCTCGCTGAACGGAATCCG
GAGCCTTAAGACGCCATCACCAACGAAGATCGTCAATACTGTACTGTAGAACCTTGCTATAGGTATGATAAATTCGTGTC
GAACACTCCATACGATTAGAGACAGCCATACAGGATTCAGTTTGTGGGCCCTAGTACTTAGAGATGATTCCAGTCTGATC
GTATTATTGTCCGACGAGAAGGCATCGTACGCACAGTAGTTTCGT---GTACTGTATCGTTGGTCCGTGCAT-GCATATA
AGGGCGGCCACTGTCACGAGCTCAGATCCATCCATACAG-C---CTTCGCTGCCCACGAACCAAACATTCGGATACAGTC
AACCACCATACGGACAAGGCCTGATCGTCACGGGCGACCATGAAGCCTCCC---GCATTGCC------------CATCCG
CGGCCTCGTTCTTGTCCTGGCCCTCGCCTGCGCCGGCATTGCACCGGCGAGCG------GCGG------TGGCGGCGGGC
GGTGGGACGTACTGCAGCGCAGCATCGGCGTGTCGGCGATGCACATGCAGCTCCTGCACAACGACCGCGTCATCATCTTC
GACCGCACCGACTTCGGGCAGTCCAACCTCTCCCTCCCCGACGGCCGCTGCCGCCGCAACCCCAGGGAGCGCGTGCTCCC
CGTCGACTGCACCGCGCACTCCGCCGAGTACGACGTCGCGTCCAACACCTTCCGCCCGCTCTTCGTCTTCACCGACACCT
GGTGCTCCTCGGGCACCGTCGCGCCCGACGGCACCCTCGTCCAGACCGGCGGGTGGAACGACGGGTACCGCAACGTGCGC
GCCATGCGCGCGTGCGACGGCGG------------------CAGCTGCGACTGGAACGAGACGCAGGACGCGCTCGCCGC
GAACCGGTGGTACGCCACCAACCAGATCCTCCCCGACGGCCGCGCCTTCATCGTCGGCGGCCGCAGGCAGTTCAACTACG
AGTTCTTCCCCAAGGCCGATGCTTCCGACGCCTCGGCCATCGCATTGCCGTTCCTGGTTCAAACTAGGGACCCCGAGGAG
AACAATCTGTATCCTTTCGTCCACCTGAACATCGACGGCAACCTTTTCATCTTTGCCAAGAACCGCGCCGTGCTTCTCGA
CTACAAGAAGAACAAGATCGTCCGGACGTACCCTGAGCTGGCCGGCGGCGACCCCAGGAACTACCCCAGCTCCGGCTCGT
CGGTGCTGCTGCCCCTGAAGCCGTCGCCCACCGAGGCCGAGGTGCTGGTCTGCGGCGGCGCGCCCGCGGGCTCCTACAAC
TCGACCAAGGAGAAGACCTTCTTCCCGGCGCTTGTGACCTGCGGGCGGATCAAGATCACGGACGCTTCACCGGCGTGGGT
GATCGAGAGAATGTCGTCGCCGCGAGTGATGGGGGACATGATCCTGCTGCCAAACGGCGCCGAGGTGGTGATCATCAACG
GCGCCATGGACGGCACCGCCGGGTGGGAGGCCGCCAACACCCCGGCCTACGCGCCCGTCGTGTACCGGCCGGACCACGCG
CCCGGGGACCGGTTCGAGGAGCAGAGCGCGACCGACATCGCGCGGCTGTACCACTCGTCGGCGATCCTCCTCCGCGACGG
CCGGGTGCTGGTCGGCGGGAGCAACCCGCACATCTACTACAACTTCAGCAACGAGCAGTACCCGACAGAGCTCAGCCTGG
AGGCCTTCTCGCCGGAGTACCTCGACAGCTCCAACGACGCCCTCCGTCCAAAGATCACCCACCCCTCGCCGGCCGACCCG
GCGGTGAGCGTGAAGTACGGTGACTCCATGACCCTGCAGTTCGAGGTGCCAGCGGTCGCGCCGAGAAGGAGACCGCGCGG
CGGGGGCGACGGCGACGGCGGTTCTCTCGGCCTCGTGTCGGTGACGATGGTGGCGCCGTCGTTCACGACGCACTCGTTCG
GGATGAACCAGAGGCTGCTGTTCCTGGACGTGGCGGGGCCGACGGCGCTGCACGGCGCG------------GCGGGCGCG
TACGAGGCGTCGGTGGTGATGCCGGCGACGGCCGTGCTGGCGCCGCCGGGGTACTACATGGTGTTCGTGGTGAACGGGCA
CATCCCCAGCGAGGGGCTGTGGGTCCACATAGAGTGACGGCGATGCATGGCG--------GCATCGGCATGCATCATGTA
TAGCACGACCCGATTGTTTTGTTCTCTTCTGTCTTCTCTCGTGTGGTTTTTGTC---ACCACGCACGAATGTGAGGTGAT
GCCGTGACTTTGTTCGTTGTTCAGTCCTA--------CCGTGCGTGCTTGGCGACGCCCGATCGAGTCGGATTCATAGGA
CAGAGAGAGCGAAAGGCGAAGAATGTCTGAAAAAGGTGCTCGGCTCAGCTGAGACT----------------------GA
GAGTGAGGCTAGATTCACGTGAACCGGCCGAGCCTCGCGGCACACGTGACGCACCCTAGACGAATCTGCTCCTGGGC---
-------CTGGCCTACGTGCATTTGGTGGATTCA-------------------------TGCTGCTGCGTCGAAGCGGTA
TGGCCGCTGTCGCGATCCAGCCGGTTGTTGGCGGCGTTCCTTCCTTC----TCTGGGAGACACCGGCGGCTTCAGAGCTG
AGAACGCGCGCCGTTCGCGTGCGCGCGC-GGGGTGATGGCAGGGATGGTTGCGGTTGCGGCCGGTGGCCTCGGACGTCAC
GGGAATGATTACGCGGCGGTTGGGAAGTGCGGACGTGCAGT---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------
>SNPs
-------------------------------S-----S------------------------------------------
------SS--------------------------------S--------------S---------------S--------
------------------------------S---S--------------SS---S------------SS----S----S-
----------------------------------S-----------------S----S---------S------------
---------------S--S------------S---------SS-------S----------S--------S----SS---
-----------------------S-------------------------------------S------------------
----S-----------------SS--------S-----------------S-----------------------------
---------------------------------S----------------------------S-----------------
--------S-----------------------------------------------------------------------
-------------------S-------------S-----------------------------------S----------
-------S--------------------------SS---S----------SSSS--------------------------
----------------------------S---------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------SSS----S---------------------------
-----------S--------------------------------------------------------------------
--------------------------------S--------------------S-------S------------------
---------------------------S-----------------------------------SSSSSS-----------
----------S---------------------------------------------------------------------
-----------------S-S------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------S-----------S---------------
-------------------------SSS----------------------------------------------------
S------------------------S------------------------------------------------------
----------------------------------------------------------------S---------------
--------------------------S--------------------------S-----------------S--------
-----S---------------------------S----------------------------------------------
----------------------S---------------------------------------------------------
--------------------------------------S-----------------------------S-----------
---------------------------------------------------S----------------------------
------------------------------------S---------S---------------------------------
---------------------------------------------------------S----------------------
--------------------------------------------------------S-----------------------
----------S-----------------------------------------------------------S---------
--------------------SS-S--S--------S--------------------S--S--------------------
---------S-----------S-----------S----------------------------------------------
S-------------------S-----------------------------------S-SSSSSSSSSSSSS---------
--------S-------S-----------S---------------------------------------------------
---------------S-----------------------SSSSSS-SSS-SSSSSSSSSS--------------------
------------------------------------------------------SSS-----------------------
--------------------------S--SSSSSSSS---------------------------------S---------
-----------S--------------S-----------------------------------------------------
---------------------------------SSS-S---------------------------------------SSS
SSSSSSS-----------------------------------------------------SSSSSS--------------
-----------------------------------------------SSSS-----------------------------
---------------S------------S--------------------------------------------S------
----SSS----------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_840
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------TCAAACCATCCTGCTGGCAG----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------
>reverse_1947
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------CAACATCGACGGCAACCTTT----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------
>forward_854
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------GGCAGAAATAATGGCCGCG--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------
>reverse_2801
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
CGATGAACCAGAGGCTGCTG------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------
>forward_2006
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------GCCGTCCTTCTCGA
CTACAG--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------
>reverse_3960
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------ATTTCCCCAAATCGCCACCT---------------------
--------------------------------------------------------------------------------
---------------------------
