>input_sequence_44324
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------------------------------ATGTCTCGTGGCGGCGGCTACGGGGAGATGGGGC
AGAAGATCGACTACGTGTTCAAGGTGGTGCTCATCGGCGACTCCGCCGTCGGCAAGTCGCAGCTGCTGGCCCGGTTCGCG
CGCAACGAGTTCAGCCTCGACTCCAAGGCCACCATCGGCGTCGAGTTCCAGACCAAGACCCTCCAGATCGACAACCGCAC
CGTCAAGGCCCAGATCTGGGACACCGCGGGACAAGAGAGGTAAATATTTCACTAATCACTAATCAAACCCCAAACCCACC
CTGCTAGCTGTATCTT-----------GGCCTCGATCATTTTATTGTATTGTATTGTATTGTATTGGAGAAGCATATTAT
TGTACATATAGGCCATG-----------ATGTACTACAGCACTACTAGCCCGCGGTAGTAATTATCTTCTTGTCTGTTTC
TCTAGTTA--T--TATGAATGAATGAAGTTTGTTGTATGGAAATGTGGAATGCAGCTAGGCTTCTAGTTTCCTCTATATA
TTGGTTTCGCGCATGGTCCGGTCCTTGGTCAGTGCAATAGTGATGGATA---------------------TGTTTG----
--------GTCTCTGCAATTATGTTGGAATTA------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------ATACACTGTCTGCTTTAAAAGGGAATTATTGTTC
CTTGTGTTCCTTGCTCTGATGAGGTGTCCTCGCCCGAAAATTATGTTCAGAATTGGGGTGTTTCTAGTTCTCATCTAACT
CCTACACCGTTGGATCTTACATGAAGATTCGTGGGGATTCTTTCTTTTATTTATTTTTTGTTTGGTTAATCAAATAGTGT
AGGAGTTAGATGAGACTTTGTTAATTCTCATCTAGATGAGAATTAGCAAATCCGTTAGAATTGACATACAGATGTTACGC
CTGTTCATTTACAACGACACAAATACTTCCATGGTAACAAATTTGATGTTTGTTCGATCCAAATGTGGATCAGATA-GTT
GCATCAGAATAGCATGCCTTACATTTTGACACCTATCTGAAATTACAGTTACCTATTATCATACATAATTGCAA------
--TTAGGGGTAAGATTAGAATCTCCCGAAAAACTTTAAACAACTTCTC--------------------------------
---------A-----TGGCACATTAAGCAGCTTA---GATGATAAGCCTCGGCATCAGCCTATGGCACCTAATAGCAATG
TCTTTTGGCAGCACCTAATAGTACCAGGTCTATCAGTTTTTTCATGATTTTTTTCTTAATTTT-GCAAATGAACAGTACT
GATTGTTGTTGTAAGTGAACGCTAACAGTAACAATAGCCTACCCCAGC---------TTGCTTTCTTATCTGATTGTTCA
CTTTCAACATCTAAACCAGCTGCACTGAATGTGGTAACAGGTACCGAGCGGTAACCAGTGCCTACTACAGAGGCGCAGTA
GGAGCTATGCTAGTATATGACATGACCAAGCGCCAGTCCTTCGACCATATGGCGCGGTGGCTCGAGGAATTGCGAAGCCA
TGCTGACAAGAACATCGTCATCATGCTCATCGGGAACAAATCGGACCTGGGCACGCTCCGGGCTGTCCCGACAGAGGATG
CCAAGGAGTTTGCCGAGCGCGAGAGCCTCTTCTTCATGGAGACGTCCGCTCTCGAGGCCACCAATGTTGAGAAGGCCTTC
ATGACAGGCCTCGAGGAGATATACCGCACTGTCAGCAAGAAAAACCTTGTCGCCAACGACGAGGCTAACTCCGGCGGGAA
CTCCAGCTTGCTGAAAGGAACGAAAGTTATCATCCCTGGCCAGGAGCCGGCCCCTCCGGCCAAGGCAGCATGTTGTATGT
CCTCCTAG------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------
>chr5D_1_TraesCS5D01G179100
GGATGAAGAGTGTTGTTGATCATGGTGCCGTTGCTGTTGGCCACCTCGAAGCTTTTCCTTGCCTCGCTGTGGCAGCACTA
GCAGGCACCGAAAGCCACCCTGCTGTATTGTCCACAATGATGAGTGGTGGTAACCG--------TGCATTCCCCGTGAAC
GATGAGAGGAAGGAAGCAGGAGGTAGGAGATGGCAGGAAGGAACGGCCTCAATAAGTCGAATGAA-GCAACAAGGTTAGC
ACGTGGGATTTCGCCGAAGGAAAACCAGAACCGCTGCCCAAGTGCCGAGTCGTGCAGGGCGATCGTGGACTTGGGACGTC
CTAAAAGTATTTTAATGCTACCCGCAAAAAAAAGTATTTTAATGCGTTATAAGCTCGTTCGCAACG-TTTTTTGCAGTCG
GATGATACGTGTGCCATACTGTCATGGTCAATTTCTCTCGAGAACAAGCACCGTTTTTTCTTTTACCAAAAAGAACAGGC
ACTGTTTGTGGTACAAGTACAAGAGAGAAGGCAACAGCACCGGTACATTTTTTATATATAAAAAA---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------AACA
GCACCGGTACATTTTAGTAGTACATCTGGTGTGGGTGGCGGGGCCGTTGACGGTTGAGCACGTCTTGGCAGCTGATTTTC
CACCTCATGTGCATACCCGCTTTCCTGTTGATCGCTTCAACACAACACTGCT---CCTCCTCCCTAATTTTCTAACACTA
AACAAACCAAACCAA-----TTCA--TCATCATCATCGCCGCCACCACCACCACCATCATCATC-------TCTTCTTCT
CCAAATAACAAATCAGCGCTTCGCCAAATCCCACCCACCACCTGCTCCCCTCGC----CCTTCTCCTAAATCGCAAGCAC
TTCCTCCGCCTTCCGCGTTCTTGATGCAACAGACAGTCCTGCGATTTCAGTAGCCAG--GAAGGAG---AAAGGGGGCAG
GCGCCGTTTTCTG---------------------------TCCTGAGAGGAGATCTTGCTGGTCTAGTCTTGGTTGTTGA
GGCAGGGAGATTAAGAGCCGAGGGA------------GGGAGGGAGATGTCTCGTGGCGGCGGCTACGGGGAGATGGGGC
AGAAGATCGACTACGTGTTCAAGGTGGTGCTCATCGGCGACTCCGCCGTCGGCAAGTCGCAGCTGCTGGCCCGGTTCGCG
CGCAACGAGTTCAGCCTCGACTCCAAGGCCACCATCGGCGTCGAGTTCCAGACCAAGACCCTCCAGATCGACAACCGCAC
CGTCAAGGCCCAGATCTGGGACACCGCGGGACAAGAGAGGTAAATATTTCACTAATCACTAATCAAACCCCAAACCCACC
CTGCTAGCTGTATCTT-----------GGCCTCGATCATTTTATTGTATTGTATTGTATTGTATTGGAGAAGCATATTAT
TGTACATATAGGCCATG-----------ATGTACTACAGCACTACTAGCCCGCGGTAGTAATTATCTTCTTGTCTGTTTC
TCTAGTTA--T--TATGAATGAATGAAGTTTGTTGTATGGAAATGTGGAATGCAGCTAGGCTTCTAGTTTCCTCTATATA
TTGGTTTCGCGCATGGTCCGGTCCTTGGTCAGTGCAATAGTGATGGATA---------------------TGTTTG----
--------GTCTCTGCAATTATGTTGGAATTA------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------ATACACTGTCTGCTTTAAAAGGGAATTATTGTTC
CTTGTGTTCCTTGCTCTGATGAGGTGTCCTCGCCCGAAAATTATGTTCAGAATTGGGGTGTTTCTAGTTCTCATCTAACT
CCTACACCGTTGGATCTTACATGAAGATTCGTGGGGATTCTTTCTTTTATTTATTTTTTGTTTGGTTAATCAAATAGTGT
AGGAGTTAGATGAGACTTTGTTAATTCTCATCTAGATGAGAATTAGCAAATCCGTTAGAATTGACATACAGATGTTACGC
CTGTTCATTTACAACGACACAAATACTTCCATGGTAACAAATTTGATGTTTGTTCGATCCAAATGTGGATCAGATA-GTT
GCATCAGAATAGCATGCCTTACATTTTGACACCTATCTGAAATTACAGTTACCTATTATCATACATAATTGCAA------
--TTAGGGGTAAGATTAGAATCTCCCGAAAAACTTTAAACAACTTCTC--------------------------------
---------A-----TGGCACATTAAGCAGCTTA---GATGATAAGCCTCGGCATCAGCCTATGGCACCTAATAGCAATG
TCTTTTGGCAGCACCTAATAGTACCAGGTCTATCAGTTTTTTCATGATTTTTTTCTTAATTTT-GCAAATGAACAGTACT
GATTGTTGTTGTAAGTGAACGCTAACAGTAACAATAGCCTACCCCAGC---------TTGCTTTCTTATCTGATTGTTCA
CTTTCAACATCTAAACCAGCTGCACTGAATGTGGTAACAGGTACCGAGCGGTAACCAGTGCCTACTACAGAGGCGCAGTA
GGAGCTATGCTAGTATATGACATGACCAAGCGCCAGTCCTTCGACCATATGGCGCGGTGGCTCGAGGAATTGCGAAGCCA
TGCTGACAAGAACATCGTCATCATGCTCATCGGGAACAAATCGGACCTGGGCACGCTCCGGGCTGTCCCGACAGAGGATG
CCAAGGAGTTTGCCGAGCGCGAGAGCCTCTTCTTCATGGAGACGTCCGCTCTCGAGGCCACCAATGTTGAGAAGGCCTTC
ATGACAGGCCTCGAGGAGATATACCGCACTGTCAGCAAGAAAAACCTTGTCGCCAACGACGAGGCTAACTCCGGCGGGAA
CTCCAGCTTGCTGAAAGGAACGAAAGTTATCATCCCTGGCCAGGAGCCGGCCCCTCCGGCCAAGGCAGCATGTTGTATGT
CCTCCTAGAT-CCATCTTGTTTCTGGCAGGTAAAGTTTCTAAGTTGATCTCGCGGTATCGACACGCTGAATGGGTGGGAT
TCTTGGGAGGAGGGATGTAATTACATGAATAGGTGACTCACATAAATTGTAATCTTGTTGATGATTAGAATTTGTATCTG
ATTATACGGTGGCATACAGTTATCACGAATCCTTCTATTTGGGATGTAATTAGCCCAACCTTTCGTGCTGGTTTTGCTGT
TCTCCCCCCTTTGCTCTCCACAAACATACTAGACCGAAAGCGTGTGCTGCCGCGTATATCTGTCAACGAACTACAGAACG
ACATGAGAAAAATCGGAAGGGCCGGCTGATACAAATATCTGAATACTTTGGTTGCATGCATCCTACTAGTTGTATAGAAC
CTGGGTGTGAGCTTGTTTTGTTTTATATCCGCTTGATACGGCATTATGAGTTGATAAAGTACCCTTTATTGAGAAATAAT
GTCTGAATACTAATACAAGAGTACTGTCAATGTTGGTACTCCGTTCATCTCTGTCTTACCGTTCGTCAGGAGTACAGCAT
GGTAAGCACAGGTGGCATGAACCATATTATGCATTGTTTGAATTGTACAGACTAAAAACAACAAGATATAGCAACTACTT
AGGTATTGCTATGATGATTTATTAAATATAGGCTTAAGTGCACTATGAGGATCCTTTGGTTGAGATATAGACGGCTTCTT
GGCTGTAATTTTGTAGTGTAGTTATGATGATATATTGACCCCGTTAATTCTAAATCCTAGCACCCTAAGCCATTATATTT
CCGCATTCGCTAAACATCAAGCACCTGAAAAGAAATTTTGTGTCGGTCAC-TTTTTTCTGCTCCGCCCCGAGCGCGGGAC
AGAAAGGCCGTGGACTCCATGGCACGTGCGAGCCGTGAACGAGCGGGAACCGGTGACGCTGCAGAGTCGAAGGCGGGAGC
ATGTCCGAAACCTGACTGGTGTGGGTCGGGGGTGCAGGGTGGTCGTTGGT
>chr5A_1
GGATGAAGAGTGTTGTTGATCATGGTGCCGTTGCTGTTGGCCACCTCGAAGCTTTTCCTTGCCTCGCTGTGGTAGCACCA
GCAGGCACCAAAAGCCACTCTGC---ATTGTCCACAATGATGAGTGTAGGTAACCATGAAGCCATGCAATCCCCGTGAAC
GATGGGAGGAAAAAAGCAGGAGGTAGGAGATGGCAGAAAGGAACGGCCTCAAGAAGTTGAATGAAGGCAACAATGTTAAC
ACGTGGGATTTCGCCGAACGAAAACCAAAACCACTGCCCAAGTGCCGAGTCGTGCAGGGCGATCGTGGACTTGGGACGTC
CTAAAAGTATTTTAATGC---------------------------GTTGTAAGCTCGTTGGCAACG-TTTTTTGCAGTCG
GGTGATACGTGTGCCATACTGCCATGGTCAATTTCTCCCGAGAACGAGTACTCGTTGCGTGACA----------------
--------------------AAGGGTGAAGGCAACAACAT----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------A
GTACCAGTACATTTTACTAGTACATCTGGTGTGGGTGGCGGGGCCGTTGACGGTCGAGCACGTCTTGGCAGCTGATTTTC
CACCTCATGCGCACACCCGCTTTCCTGTTGATCGCTTCAACACAACTCTGCTGCTCCTCCCCCCTAATTTTCTAACACTA
AACAAACCAAACCAAACCAAACCAATTCATCATCATCGCCGCCGCCACCACCACCATCATCATCATCATCTTCTTCTTCT
CCAAAAAACAAATCAGCGCTTCGCCAA-TCCCACCCACCACCTGCTCCCCTCGGCTCTCCTTCTCCTAAATCGCAAGCAC
TCCCTCCGCCTTCCGCGTTCCTGATGCAACAGACAGTCCTGCGGTTTCAGTAGCCAGAGGAAGGAG---AAAGGGGACAG
GCGCCGTTTTCTG---------------------------TCCTGAGAGGAGATCCTGCTGGTCCAGTCTTGGTTGTTGA
GGCAGGGAGATTGTAAGGGCC--------GAGAGAGGGGGAGGGAGATGTCTCGTGGCGGCGGCTACGGGGAGATGGGGC
AGAAGATCGACTATGTGTTCAAGGTGGTGCTCATCGGCGACTCCGCCGTCGGCAAGTCGCAGCTGCTGGCGCGGTTCGCG
CGCAACGAGTTCAGCCTCGACTCCAAGGCCACCATCGGCGTCGAGTTCCAGACCAAGACCCTCCAGATCGACAACCGCAC
CGTCAAGGCCCAGATCTGGGACACCGCGGGACAAGAGAGGTAAAATTTTCACTAATCACTAATCCAACCCCAAACCGACC
CTGCTAGCTGTATCTTCTCTCCGTGCTGGCCTCGATCGTTTTATTTTGTTGG------------------AGAATCATAT
TATGCATATAGGCCATGGCCTGATGGCCATGCACTGCAGCACTACTAGCGCGCGGTAGTAATTAC---CTTGTCTGTTTC
TCTAGTTA--TGATATGAATGAATGAAGATTGTCGTGTGGAA--------TGCAGGCAAGCTTGTAGAGTTTCCTCTGTA
TTGGTTTTGCGCATGGTCCTGTCCTTGGTCAGTGCAAGAGTGATGGATTTGTCATTGTCCGTGACCTTATTGTTTG----
--------ATCTGTGCAATTATGCTGGAATTA------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------ATACACTGTCTGCTTTAAAAGGGAATTATTGTTC
CTTGTGTTCCTTTCTCTGATGAGGTGTCCTCAACCGAAAGTTATGTTTGGAATCGACATGC-------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------TACAGATGTTAAGC
ATGTTCTTTTACAACAACACTAATATTTCCATGGTAACAAATTTGATGTTTGTTCCATCATAATCT-AGATCGGACACTT
ACATCAGAATAGCATTCCTTATATTTTGACACCTATCAGAATTTACAGTTACCTATTATCATACATAATTGCAA------
--TTAC-GGTGAGATTAGAATCTGCCAAAAAACTTTAACTAACT--------------------CTTCTCAGGAATAAAA
CACTGAAGAAATAGGTAGCACATTAAGCAGCTTATTAGACAATAAGTCCCAGCATTAGCTTATGGCACCTAATAGTAATG
TCTTTTGGCA---CCTAACAGTAATAGGTCTAGCAGTTTCTTCATGAATATTTTGTTAA-TTT-GCAACTGAACGGTACT
GATTGGTGTTGCAAATGAACGGTGGCAGTTATAATAGCCTACCTCCCTACCCCAGCTTTGCTTGCTTATTTGATTGTTCA
CTTTCAACATCTAAACCAGCTGCACTGAATGTGGTAACAGGTACCGAGCAGTAACAAGTGCCTATTACAGAGGTGCAGTA
GGAGCTATGCTAGTGTATGACATGACCAAGCGCCAGTCCTTTGATCATATGGCACGGTGGCTCGAGGAATTGCGAAGCCA
TGCTGACAAGAACATTGTTATCATGCTCATCGGGAACAAATCGGACCTGGGCACCCTCCGGGCTGTCCCAACAGAGGACG
CCAAGGAGTTCGCCGAGCGTGAGAGCCTTTTCTTCATGGAGACGTCCGCTCTTGAGGCTACCAACGTGGAGAAGGCCTTC
ATGACCGGCCTCGAAGAGATATACCGCACCGTCAGCAAGAAAAACCTTGTCGCCAACGACGAGGCTAACTCCGGTGGGAA
CTCGAGCTTGCTGAAAGGAACGAAAGTTATCATCCCTGGCCAGGAGCCGGCCCCTCCGGCCAAGGCAGCATGTTGTATGT
CCTCCTAGATACCATCTTGTTCCTGGCAAGTAAAGTTTCTAAGTTGATCTCGCAGTGTCGACACGCTGAATGGGTGGGAT
TCTTGGGAGGAGGGATGTAATTACATGAATAGGTGACTCACATAAATTGTAATCTTGTTGATGATTAGATTTTGTATCTG
ATTATACGGTGGCGTACAGTTATCATGAATCCTTCTATTCGGGATGTAATTAGCCCAACCTTTCATGCTGGTTGTGCTGT
TCTTCCCCCTTTGCTCTCCACAAACATACTAGACCGAAAGCGTGTGCTGCTGCGTATATCTGTCAAAGAACTACAGAACG
ACATGAGAAAAATCGCAAGGGCCGGCCCATACAAATATCTGAATACTTTGGTTGAATGCATCCTA---GTTGTATAGAGC
CTAGGTGTGAGCTCGTTTTGTTTTATATCCGCTTGATATGGCATTATGGGTTCATAAAGTACCCCTTATTGAGAAATAAT
GTCTGAATACTAATCCAAGAGTACTGTCAATGTTGGTACTCCGTTCATCTCTTTCTTACCGTTCGTCAGGAGTACAGCAT
GGCAAGCACAGGTGGCATGAACCATATGATGCATTGTTTGAATTGCACAGACTAAAAACAACTGGATATAGCAACTATTT
AGGTATTGCTATGATGATTTATTAAATATAGGCTTAAGTACACTATGAGGATCCTTTGGTTGAGATATAGACGGTTTCTT
AGCTGTAATTTTATAGTGTAGTTATGATGATCTATTGACTCCGTTAATTCTAAATCATAGGGCCCTAAGCCATTATATTT
TCGCATTCGCTAAACATCAAGCACCTGAAAACAAATTTTGTGTCGGTCATTTTTTTTCTGCTTCGCCACGAGCGTGGGAC
GGGCAGGCCGTGGACTCCATGGCGAGTGCGAGCTGTGAACGAGCGGGAGCCGATGACGCTGCAGAGTCGAAGGCGGGAGC
GTGTCCGAAACTTGACTGGTGTGGGTTGGGGGTGCATGGTGGTCATTGGT
>chr5B_208
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------GTCGAATGAA-GCAACAAGTGTAGC
ACGTGGGATTTCGCCGAACGAAAACCAGAACCGCTGCCCAAGTGCCGAGTCGTGCAGGGCGATCGAGGACTTGGGACGTC
GTAAAAGTATTTTAATGC---------------------------GTTATAAGCTCGTTCGCAACGTTTTTTTGCAGTCG
GATGATACGTGTGCTATACTGTCATGGTCAATTTCTCCCGAGAACAAGCACCGTTTTTT-TTTTACCAAAAAGAAAA-GC
ACTGTTTGTGGC------ACAGGAGAGAAGGCAACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACA
GCACCGGTACATTT---TAGCACATCTGGTGTGGCTGGCGGGGCCGTTGACGGTTGAGCACGTCTTGGCAGCTGATTTTC
CACCTCATGTGCATGCCCGCTTTCCTGTTGATCGCTTCAACACAACACTGCTGCT---CCTCCCTAATTTTTTAACACTA
AACAAACCAAACCAAACCAATTCA--TCATCATCATCGCCGCCGCCACCACCACCATCATCT------TCTTCTTCTTCT
CCAAATAACAAATCAGCGCTTCGCCAAATCCCACCCACCACTTGCTCCCCTCGC----CCTTCTCCTAAATCGCAAGCAC
TCCCTCCGCCTTCCGCGTTCTTGATGCAACAGACAGTCCTGCGGTTTCAGTAGCCAG--GAAGAAGGAGAAAGGGGACGG
GACGGATCGCCCTTCCGCCGCGTCTTGACCGGCGCCGGGATCCTGGGAGGAGGTCCTGCTGGTCTGGTCTTGGTTGTTGA
GGCAGGGAGATTAAGAGCCGAGAGAGAGAGAGAGAGAGGGAGGGAGATGTCTCGTGGCGGCGGCTACGGGGAGATGGGGC
AGAAGATCGACTACGTGTTCAAGGTGGTGCTCATCGGCGACTCCGCCGTCGGCAAGTCGCAGCTGCTGGCCCGGTTCGCG
CGCAACGAGTTCAGCCTCGACTCCAAGGCCACCATCGGCGTCGAGTTCCAGACCAAGACCCTCCAGATCGACAACCGCAC
CGTCAAGGCCCAGATCTGGGACACCGCGGGGCAAGAGAGGTACGTA-------AATCACTCATCAAACCCTAAACCCACC
GTCAC----------------------GGCCTCGAGCGTTTTATC-----------------------------------
-------------------------------------------------------------TTATCTTCTTGTCTGTTCC
CTAGTTATGGT--TATGAATGAATGAGGATTGGTGAGTGGAA--------TAGTGATGGAT-------------------
-------------------------------------------TGGATTTGTCATTGTCCGTGGAGAAATGGCCTTATTA
CTTGCTCTGTCTCTGCAATTATGATGGAATTGATACACTGTCTGCTGCTTCAAAAGGAAATTATTGTCTGTGGAGAAATG
GCCTTATTGTTGCTCTGTCATGCAATTATGATGGAATTGATACACTGTCTGCTGCTTCAAAAGGAAATTATTGTCTGTGG
AGAAATGGCCTTATTGTTGCTCTGTCATGCAATTATGATGGAATTGATACACTGTCTGCTTTAAAAGGGAATTATTATTC
GTTGTC-TCCCTGCTCTGGTGACGTGTCCTCAACCGAAAATTGTGTTTAGAATTGACATAC-------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------TACAGATGTTAAGC
ATGTTCGTTTACAACAACGCTAATGTTTCCATGGTAACAAATTTGATGTTTGTTTGACCATAATGTAAGATCAGACGGTT
ACATCAGAATAGCATGCCTTACATTTTGACACCTATCAGGAATTACAGTTACCTATTATCATATATAGTTGTGTATTTTC
AGTTAGGGGTAAGATTAGAATCTGCCGAAAAACTTTAACCAACTTCGCAGCAGACTTTAACCAACTTCGCAGCAGTAAAA
CACAGAAGTA-----TAGCACATTAAGCAGCTTA---GACAATAAGTCCCAGCATCAGCTTATGGTACCTAATAGTAATG
TCTTTTGGCA---CCTAAGAGTAATAA--CTAGCAGTTTGTTGATGAATATTTTGTTAA-TTTTGCAACTGAACTGTACA
GATTGGTGTTGCAAATGAATGGTAACAGTAATACTAGCCTACCCCAGC---------TTGCTTGCTTATTTGATTGTTCA
CAGCAC----CTAAACCAGCTGCACTGAACGTGGTAACAGGTACAGAGCAGTAACAAGTGCCTACTACAGAGGCGCAGTA
GGAGCTATGCTAGTATATGACATGACCAAGCGCCAGTCCTTCGATCATATGGCGCGGTGGCTTGAGGAATTGCGAAGCCA
TGCTGACAAGAACATCGTTATCATGCTCATCGGGAACAAATCGGACCTGGGCTCGCTCCGGGCTGTCCCGACGGAGGATG
CCAAGGAGTTCGCCGAGCGCGAGAGCCTCTTCTTCATGGAGACGTCCGCTCTCGAGGCCACCAATGTGGAGAGGGCCTTC
ATGACAGGCCTCGAGGAGATATACCGCACTGTCAGCAAGAAAAACCTTGTCGCCAACGACGAGGCTAACTCCGGCGGGAA
CTCGAGCTTGCTGAAAGGAACGAAAGTTATCATCCCTGGCCAGGAGCCGGCCCCTCCGGCCAAGGCAGCATGTTGTATGT
CCTCCTAGATACCATCTTGTTTCTGGCAGGCAAAGTTTCTAAGTTGATGCCGCGGCATCGACACGCTGAATGTGTGGGAT
TCTTGGGAGGAGGGATGTAATTACATGAATAGGTGACTCACATAAATTGTAATCTTGTTGATGATTAGATTTTGTATCTG
ATTATACAGTGGCGTACAGTTATCACGAATCCTTCTATTTGGGATGTAATTAGCCCAACCTTTCATGCTGGTTTTGCTGT
TCTTCTCCCTTTGCTCTCCACAAACATACTAGACCGAAAGCGTGAGCTGCCGCGTATATCTGTCAACGAACTACAGAACG
ACATGAGGAAAATTGCAAGGGCCGGCTGATACAAATATCTGAATACTTTGGTTGCATGCATCCTACTAGTTGTATAGAGC
CTGGGTGTGAGCTTGTTTTGTTTTATATCCGCTTCATATGGCATTATGAGTTGATAAAGTACCCTTTATTGAGAAATAAT
GTCTGAATACTAATGCAAGAGTACTGTCAATGTTGGTACTCGGTTCATCTCTGTCTTACCGTTCGTCAGGAGTACAGCAT
GGTAAGCACAGGTGGCATGAACCATATTATGCATTGTTTGAATTGTATAGACTAAAAACAACAAGATATAGCAACTACTT
AGGTATTGCTATGATGACTAATTAAATATAGGCTTAAGTGCACTATGAGGATCCTTTGGTTGATATATAGACGGTTTCTT
GGCTGTAATTTTGTAGTGTAGTTATGATGATATATTGACTCCGTTAATTCTAAATCCTAGGACCCTAAGCCATTATATTT
CCGCATTCGCTAAACATCAAGCACTTGAAAACAAATTCTGTGCCGGTCAC-TTTTTTCTGCTTCGCCATGAGCACGGGAC
GGGGAAGCCGTGGACTCCATGGCAAGTGCGAGCTGTCAACGAGCGGGGGCCGGTGATGCTGCAGAGTCGAAGGCGGGAGC
GTGTCAGAAACTTGACTGGTGTGGGTCGGGGGTGCAGGGTGGTCGTTGGT
>SNPs
------------------------------------------------------------------------S-----S-
---------S--------S----SSS--------------------SS-------S------------S-----------
----S------SS-----------------------S---------------S---------------------------
------------------S-------------------------------------------------------------
------------------SSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------------
-------------------------------------S---------------------S---------------S-S--
-----------SSSSSSS------------------S--SSSSSSSSSSSSSSSSSSSSSSSSSS---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------S---------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------S------------------------------------
--------------------------------------------------------------------------------
-S-----------------------------------------S--------------------------------S---
-------------------------------------------------------S------------------------
----------------------S---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------S-------S-S---SSSSSSSSSSSSSSSSSSS--S--SS---
-S-S---------------------------S---S-------------S------------------------------
----------------------------S-------S-----SSSSSSSS-----S-------S---SS-SSS--S-S--
-------S-----------S-----------------S----------S-------------------------------
-----------------------S--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------SS--------------S-------SSS--SSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------S--
S-----S--------S----S----S---------------------------------SS-----SSSSSS-SSS----
S------------------------------------S------------------------------------------
-----------------------S--------------S-------S---------------------------------
----------------S----------------------SS-----S-S-S--------S---------------S----
----------SSS-----S----SS-------S------S-------S-S----S----S--------S-----S-----
-----S-----S--S------S---------S-------------------------------S-----S----------
-------------------------------------------------S-----S------------------------
--------------------------------------------S-----------------------------------
------------------S-------------------------------------------------------------
----------S--------------------------------------------------------S------------
--------------------------------------------------------------------------------
---S----------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S----------
-------------S--------------------------------------------------S---------------
---S----------------------------------------------------------------------------
---------------S--------------------------------------------------------------S-
--------------------------------------S-----------------------------------------
--------------S-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------S-----
---------------------------------------S--------------------S-------------------
-------------------------------S------------------------------S----S------------
S-SS--------------------S--------S--------------S-------------------------------
S----------S--------------------------------------
>forward_521
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------AGAGAGAAGGCAACAGCACC---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------
>reverse_2840
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------TGATAAGCCTCGGCATCAGC---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------
>forward_530
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------GCAACAGCACCGGTACATTT------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------
>reverse_2876
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------CAATG
TCTTTTGGCAGCACCT----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------
>forward_2038
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------CGGTCCTTGGTCAGTGCAAT------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------
>reverse_3919
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------AC
CTGGGTGTGAGCTTGTTT--------------------------------------------------------------
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--------------------------------------------------
