>input_sequence_44277
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---------------------------------ATGATCATGTCCGACCCGGCCATGCTGCCGCCGGGCTTCCGGTTCCA
CCCGACGGACGAGGAGCTCATCCTCCACTACCTCCGCAACCGCGCCGCCGAATCGCCCTGCCCCGTCTCCATCATCGCCG
ACGTTGATATCTACAAGTTCGACCCATGGGCCCTGCCATGTTAGTACCT----------------CTGCACCAA------
----------------CAGATCATGATTCATGCAT----GCTG----ATGATCCATTCATTTGATTCCCACTTGCGCTAG
CTTCACTCTCATCTCAATAATCGTCTGTTATTTCTCTTGTTTCTTTAATTTTGGGGGTTAATTAATTCCAGCCAAGGCTA
GCTACGGGGACAGGGAGTGGTACTTCTTCACGCCGAGGGACCGTAAGTACCCCAACGGTGTCCGGCCGAACCGCGCCGCG
GGCTCTGGCTACTGGAAAGCCACCGGCACCGACAAGCCCATCCGCTGCAGCGCCACCGGCGAGAGCGTCGGCGTCAAGAA
GGCCCTCGTCTTCTACAAGGGCCGCCCGCCCAAGGGCATCAAGACCAACTGGATCATGCACGAATACCGCCTGGCCGCCG
CCGACGCGCA---CGCCGCCAACACCTACCGCCCCATGAAGTTCCGCAACGCCTCCATGAGGGTAAGTCGCCAGCACGTA
CGGTACAGCAATCAATCAAACATATAAACAAATTAAATCAACTGAACTGAACACCCAAAACCCTAGTATGGAGTATAAAA
CCACATATAGGAGTAGATCTTATATGTCT--GTCAATTCGTGTCATGGTAGTCGCATGCGTGGCACCGAACGATATGCAC
GCACCTGCCCGCGCACTTGCACAGCGATTTTTCTGGGAGGGCGTACGGGTTCGTGTCGTCGGCATGTCAGATTTTGCCAA
AATGGAATCGGGTTGTGCAGTGGCTTGCCAGTGGACGCAAGAGCTGCTAGCTTTAATGTGCGTGTCTCGTTTAAAGAAAT
GTTCTTTAGGCATACTTGGCATGGTTGCGCGAAGTCAATAGATCCGACAATGATAGGCCTGATTGATGCATACGCGTGTT
AATGACTGATTCACCTTTCGCCTGCTTGATTGAAAGCTTTATTCATTTATTTCTAGATTTTTTCTTTAACTAAAATTAAT
ACTACGTGCGATCCGTCTTGGCATATA---TGTATGCAGCTGGATGACTGGGTGCTGTGCCGGATCTACAAGAAGACCAG
CCAAGCATCGCCGATGGCGGTGCCACCGCTGTCCGACCACGAGCTTGACGAGCCTTCTGGCGCTGCCGGCTACCCCATGT
CGAGCGCCGGCATGATCATGCAAGGCGGCGCCGGCGGCTATCCGCTGCAGGCCGCGGCCGGCGGCACACAGAGGATGCCC
AAGATCCCGTCCATATCGGAGTTGCTCAACGAGTATTCGCTGGCGCAGCTCTTCGAGGACAGCGGACACGCGCTGATGGC
GCGGCACGATCAGCACGCCGCCCTTCTCGGTCACCCCATCATGAGCCAATTCCATGTGAACGGCATGC------------
CGCAGCTGGGGCAGATGGATTCGTCAGCCTCAACGTCGGTGGGAGGCGAGGGTGCCGCCGGGAAGCGCAAGAGGCCGTCG
GAGGACGGTGACCGTAACGGGTCGACGAGCCAGCCAGCGGCGGCGGTGACGGGCAAGAAGCCCAACACTTCTTGCTTGGG
TGCAACAACGTTCCAAACAGGCAACAACACCTTGCAGGGGTCGTCACTAGGCCAGGGCCATCAGACGCTGCTCCGTTTCT
AA------------------------------------------------------------------------------
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>chr4A_1_TraesCS4A01G131000
GCACAAGAATAGTAGCAAGCACAATTCATATACAAGACAAAGCTAAT-ACAGGTTGAAGCTGCATATGGTACCGCTACGC
TTTCTTTCTTTTGCCAGACTAACCCTACTACGGG-TCCAATTTCTTGTCTGTAGCATATGCCTTTCTTAGCCAGAAAAAG
CCCAAACAAACAAATCCTACCCTCATAACCTGTTTCCGCGCCATCTCACTGTAGTGTCGAACTAAATCTGGCCTTGCTAC
TAGACCCACAAATTTGTCAACATATTGCATACCTTCCTTTTTGTTCTATCCCTGTTAATCTAGCTGAAGTTGCCTATATG
T-------TAGTCCGGAGTCTCTACACTCTGACTCATGCATCCTTGGCAAAAAACCCAAGGAACGATTCATTTATGTCAA
AAAAGAATAACAGAGTTTCCTATCATTTTTTGGCTGAATGAATATAAGCCGTGTTTTTTTTTGAAACTATATAAGCCG--
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--------------------TGTTATTACTCTGCAACAACGGTGTGGGATCCGAAAACTTCACAAAAAAAAAACGGTGTG
GGATTCCGTTGTGTCGGGTGGATCGGGCGAGAGATTCGGCCCAAATCCATCGCT-----------CAGCAGGCAACACGT
GCGTGCGCCAGCGAGTTTCACCGGCCGACGTCATGGCGGCCCATGTCCATGCCCAATCCCCGGCGCCATCACGCCGGACG
TGAGGAATAACGAATCAACGATAACCACACACCCGGCCCCTTCCCGACGAAACCACAGAGAAGCCCTCCCTCCCTCCCTC
CTGGC--------CGGGCCATGGCCAGGCGTCACGCGCACAAGAGGACAAAATTCCGCAACCATATAAGCGGCCCCTCCC
CTCTCGTCTCCAAAAGTTCGAGCTCCTCATTTCTCATACCTACAAGCTCTGCT--------CATCTATCGCTAGCTCCCT
CTA---------GCTACCAGATCTTCTTCCAAGCCTGGTTAGCAGTCGAAGTTATCTAGCTAGCTAGCTAGCTAGGGTTT
TTGTCATCGAGC------GCGCGTGGCGTGGCGATGATCATGTCCGACCCGGCCATGCTGCCGCCGGGCTTCCGGTTCCA
CCCGACGGACGAGGAGCTCATCCTCCACTACCTCCGCAACCGCGCCGCCGAATCGCCCTGCCCCGTCTCCATCATCGCCG
ACGTTGATATCTACAAGTTCGACCCATGGGCCCTGCCATGTTAGTACCT----------------CTGCACCAA------
----------------CAGATCATGATTCATGCAT----GCTG----ATGATCCATTCATTTGATTCCCACTTGCGCTAG
CTTCACTCTCATCTCAATAATCGTCTGTTATTTCTCTTGTTTCTTTAATTTTGGGGGTTAATTAATTCCAGCCAAGGCTA
GCTACGGGGACAGGGAGTGGTACTTCTTCACGCCGAGGGACCGTAAGTACCCCAACGGTGTCCGGCCGAACCGCGCCGCG
GGCTCTGGCTACTGGAAAGCCACCGGCACCGACAAGCCCATCCGCTGCAGCGCCACCGGCGAGAGCGTCGGCGTCAAGAA
GGCCCTCGTCTTCTACAAGGGCCGCCCGCCCAAGGGCATCAAGACCAACTGGATCATGCACGAATACCGCCTGGCCGCCG
CCGACGCGCA---CGCCGCCAACACCTACCGCCCCATGAAGTTCCGCAACGCCTCCATGAGGGTAAGTCGCCAGCACGTA
CGGTACAGCAATCAATCAAACATATAAACAAATTAAATCAACTGAACTGAACACCCAAAACCCTAGTATGGAGTATAAAA
CCACATATAGGAGTAGATCTTATATGTCT--GTCAATTCGTGTCATGGTAGTCGCATGCGTGGCACCGAACGATATGCAC
GCACCTGCCCGCGCACTTGCACAGCGATTTTTCTGGGAGGGCGTACGGGTTCGTGTCGTCGGCATGTCAGATTTTGCCAA
AATGGAATCGGGTTGTGCAGTGGCTTGCCAGTGGACGCAAGAGCTGCTAGCTTTAATGTGCGTGTCTCGTTTAAAGAAAT
GTTCTTTAGGCATACTTGGCATGGTTGCGCGAAGTCAATAGATCCGACAATGATAGGCCTGATTGATGCATACGCGTGTT
AATGACTGATTCACCTTTCGCCTGCTTGATTGAAAGCTTTATTCATTTATTTCTAGATTTTTTCTTTAACTAAAATTAAT
ACTACGTGCGATCCGTCTTGGCATATA---TGTATGCAGCTGGATGACTGGGTGCTGTGCCGGATCTACAAGAAGACCAG
CCAAGCATCGCCGATGGCGGTGCCACCGCTGTCCGACCACGAGCTTGACGAGCCTTCTGGCGCTGCCGGCTACCCCATGT
CGAGCGCCGGCATGATCATGCAAGGCGGCGCCGGCGGCTATCCGCTGCAGGCCGCGGCCGGCGGCACACAGAGGATGCCC
AAGATCCCGTCCATATCGGAGTTGCTCAACGAGTATTCGCTGGCGCAGCTCTTCGAGGACAGCGGACACGCGCTGATGGC
GCGGCACGATCAGCACGCCGCCCTTCTCGGTCACCCCATCATGAGCCAATTCCATGTGAACGGCATGC------------
CGCAGCTGGGGCAGATGGATTCGTCAGCCTCAACGTCGGTGGGAGGCGAGGGTGCCGCCGGGAAGCGCAAGAGGCCGTCG
GAGGACGGTGACCGTAACGGGTCGACGAGCCAGCCAGCGGCGGCGGTGACGGGCAAGAAGCCCAACACTTCTTGCTTGGG
TGCAACAACGTTCCAAACAGGCAACAACACCTTGCAGGGGTCGTCACTAGGCCAGGGCCATCAGACGCTGCTCCGTTTCT
AACATGGGGATCGGATGAACTGACGGTGGATACACACTATACTACTTGAACCCCATCAGTTTGAATTATATACGACCGGC
GAACTGGTGATTTGAAGAACAATTATGGGGGTCTATTGCACAAGATAGGTCTAAATTAGACAAATTATTGGTCAATATAT
ATAGGAAAAGGGATTGTACTTTTACTTGCGTCAG------------------------GTGTGTGTATCGAACGAGTAGC
-TAGGTCCATGGATCATACTAGTAGATATGGTTTGTAGTGTGTACACAATATTTTTGTCTCCTAGGCATGCAGTACAATC
ATGTACTTGAAGCTTACGACCGTGCTAGGAAGGGCTTGATCAGACTGAGATCGACGGACTGAAAGTCTGGAAC-AAAGAT
GTAAAACAGCGAAAATAGATTCTTTAATGGAACCATTAATTCATCTTA-----TCATGTTTT---ACTATTGTACTCAAG
GGTCTGTATGCAGAAATGTTCAGCCATACACGAGAAGATTGTCGAATTCAAGAAAA-AAGAAGTAAAGAAAGGGACGAGA
AAATCACAAGTAGGAACACCTGCTCCAAGAACATAATTAGTCCATTCAGAAGAAGGGGAAATAGCCAGAAAAACACATAA
AGGACGGACGAGAGAAGAATATGGAACCCGGGCATTTAATAATTGGCCAAAAGCAGGCAAGTTGTGGATGGCGTTTAGCT
TTCAGTTCAGGTAGCGGATGGGTGACAGCCTTTTCATCCGGCTGAAGTTTTCTTCAGATTGGCCAAGAGGCTTTTTGTCC
ATGTAG--------------------------------------------------------------------------
-----------------------------------------AATCTTGTCCGGCCACCAAGGCATCCTGATATTGCCATG
CACATCAACAAGTCCAGGAACATCCATGTCACGGATCAAACAAAAAATGGCCCATTTGGCGGCTCGGAGTGGGATCAATT
AATGGATGGATGGGTGCACTTCAGTGCAGTGCAGGTCCCCTGGAGCCACAGCCAGAGGACAGCTCTAATTATTGATTCAC
TGTAGCAGATCCATCGTCAAGAATCACGATAA
>chr4D_1
GCACGAGAATAGTACGAATCATATTTCATATACAAGACAAAGCTAAT-ACAGGTTGAAGCTGCATATGGTACCCCTACGC
TTTCTTTCTTTTGCCTGACTAACCCTACAACGGGGTCCAATTTCTTGTCTGTAGCATATTACTTTCTTAGCCAAGAAAGG
CCCAAACAAACAAATCCTACCCTCGCAACCTGTTTCCGCGCCATCTCACTGTAGTGTCGAACTAAATCTGACCTTGCTAC
TAGACCCACGAATTTGTCAACGTATTGCATACCTTCCTTTTTCTTCTGTCCATGTTAATCTAGCTGAAGTTGCCTATATG
T-------TAGTC-------TCTACTCCCTGACTCATGCATCCCTAGGCAAACACCCAAGG-----------------AA
AGAAGAATAACAAAGCTTCCTGCTGATTATACGATCCGACTATTTTTTTT------------------------------
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--------------------------------------------------------------------------GGTGTG
GGATTCCGTTGTGTCGGGTGGATCAGGCGAGAGATTCGGCCCAAATCCATCGCT-----------CGGCAGGCAACACGT
GCGTGCGCCAGCAAGTTTCACCGGCCGACGTCATGGCGGCCCATG------CCCAATCCCGGGCGCCATCACGCCGGACG
TGAGAAATAACGAATCAAGGATAACCACACACACCCTTCC-------CGAAACCACAGAGAAGG----CCTCCCTCCCTC
CTCGC--------CGGGCCATGGCCAAGCGTCACACGCACAAGAGGACAAAATTCCGCAACCATATAAGCGGCCCCTCCC
CTCTCGTCTCCAAAAGTTCGAGCCCCTCATTTCTCATACCTACAAGCTCTGCT--------CATCTATCGCTAGCTCCCT
CTA---------GCTACCAGATCTTCTTCCAAGACTGGTTAGCAGTCCA--------AGCTAGCTAGCTAGCTAGGGTTT
TTGTCATCGAGCTCGAGCGCGCGTGGCGTGGCGATGATCATGTCCGACCCGGCCATGCTGCCGCCGGGCTTCCGGTTCCA
CCCGACGGACGAGGAGCTCATCCTCCACTACCTCCGCAACCGCGCCGCCGAATCGCCCTGCCCCGTCTCCATCATCGCCG
ACGTAGATATCTACAAGTTCGACCCATGGGCCCTGCCATGTTAGTACCTGCCTGCTGCCTCCCCTCTGCACCAA------
---------------GCAGATCATGATTCATTCAT----GCTG----ATGATCGATTCATTTGATTCCCACTTGCGCTAG
CTTCATTCTCATCTCAATAATCGTCCGTTATTTCTCTTGGGGTCCCTTAATT-----------AACTGCAGCCAAGGCTA
GCTACGGGGACAGGGAGTGGTACTTCTTCACGCCGAGGGACCGTAAGTACCCCAACGGTGTCCGGCCGAACCGCGCCGCG
GGTTCCGGCTACTGGAAGGCCACCGGCACGGACAAGCCCATCCGCTGCAGCGCCACCGGCGAGAGCGTCGGCGTCAAGAA
GGCCCTCGTCTTCTACAAGGGCCGCCCGCCCAAGGGCATCAAGACCAACTGGATCATGCACGAATACCGCCTCGCCGCCG
CCGACGGGCA---CGCCGGCAACACCTACCGCCCCATGAAGTTCCGCAACGCCTCCATGAGGGTAAGTCGTCAGCACGTA
CGGTACAGCAATCAATCAAACATATAAACAAATTAAATCAACTGAACTGAACACCCAAAACCCTAGTATAGAGTATAAAA
CTACATGTAGGAGTAGATCTTAGTATA-TATGTGAATTGGTGTCATGGCAGTTTCATGCGTGGCACCGAACGATATGCAC
GCACCTGCCCGCGCACTTGCACAGCAATTTTTCCGGGAGGGTGTACGGGTTCGTGTCGTCGGCACGTCAGGTTGTGCCAA
AATGGAATCGGGTTGTGCAGTGGCTCGCGACTGGACGCAAGAGCTGCT----TTAATGTGCGTGTCTCGTTTAAAGAAAT
GTTCTTTAGGCATACTTGGCATGGTGGCGCGAAGTCAATAGATCCGACAATGATAGGCCTGATTGATGCATACGCGTGTT
AATGACTGATTCATCTTTCGCCTGGTTGATTGCAAGTATTATTCATTTATTTCTAGA-TTTTTCATTAATTAAATTTAAT
ACTACGTGTGATCCGTCTTGGCATATA---TGTATGCAGCTGGATGACTGGGTGCTGTGCCGGATCTACAAGAAGACCAG
CCAAGTGTCGCCGATGGCGGTGCCGCCGCTGTCCGACCACGAGCTTGACGAGCCTTCTGGCGCTGGCGCCTGCCCCATGT
CGAGCGCCGGCATGATCATGCAAGGCGGCGCCGGCGGCTACCCACTGCAGGCCGCGGCCAGTGGCACACAGAGGATGCCC
AAGATCCCGTCCATATCAGAGTTGCTCAACGAGTACTCGCTGGCGCAGCTCTTCGACGACAGCGGACACGCGCTGATGGC
ACGGCACGATCAACACGCCGCCCTCTTCGGCCACCCCATCATGGGCCAATTCCATGTGAACAGCGGCGGCAACAACATGT
CGCAGCTTGGGCAGATGGATTCGTCGGCCTCGACGTCGGTGGCAGGCGAGGGTGCCGCCGGGAAGCGCAAGAGGCCGTCG
GAGGACGGTGACCATAACCGGCCGACGAACCAGCCCGCGACGGCGGTGACGGGCAAGAAGCCGAACAGTTCTTGCTTGGG
TGCAACAACGTTCCAAACAGGCAACAACACCTTGCAGGGGTC---ACTGGGCCAGGGCCATCAGACGCTGCTCCATTTCT
AACATGGGGATCGGATGAACTGACGGTGGATACACACTATACTACTTCAACCCCATCAGTCTGAATTATATACGACCGGC
GAACTGATGATTTGAAGAACAATTATTGGGGTCTATTGCGCAAGATAGGTCTAAATTAGACAAATTATTGGTTAATATAT
--AGGGAAAGGGATTGTACTGCAGGTGTGTGTGTGTGCGCGCGCGCGCGCGCGCGCGCGC----GTGTCGAACGACTAGC
TTAGGTCCATGGATCATACTAGTAGATATGGTTTGTAGTGTGTACACAATATTTTTGTTTCCTAGGCATGCAGTACAATC
ATGTACTTGAAGCTTACGACCGTGCTAGGAAGGGCTTGATGAGACTGAGATCGACGGACTGAAAGCCTGGAACAAAAGAT
GTAAAACAGCGAAAATATATTCTTTAATGGAACCATTAATTCATCTTACTGTATCATGTTTC---ACTATTGTACTCAAG
GGTTTGTATACAGAAATGTTCAGCCACACACGAGAAGATTATCGAATCCAAGAAAACAAGAAGTAAAGAAAGGCACGAGA
AAATCACAAGTACGAACACCTGCTCCAAGAACATAATTAGTCCATTCAGAAGAAGGGGAAATAGCCAGAAAAACACATAA
AGGACGGGCGAAAGAAGAATATGGAACCCGGGCATTTAATAATTGGCCAAAAGCAGGCAAGTTGTGGATGGCGTTTAGCT
TTCAGTTCAGGTAGCGGATGGGTGACAGCCTTTTCATCCGGCTGAAGTTTTCTTCAGATTGGCCAAGAGGCCTTTTGTCC
ATGTAG--------------------------------------------------------------------------
-----------------------------------------AATCTTGTCCGGCCACCAAGGCATCCCAATATTGCCATG
CACATCAACAAGTCCAGGAACATCCATGTCACGGATCAAACAAAAAATGGCCCATCTGGCGGCTCAGAGTGGGATCAATT
AATGGATGGATGGGTGCACTTCAGTGCAGTGCAGGTCCCCTGGAGCCACAGCCGGAGGACAGCTCTAATTATTGATTTAC
TGTAGCAGATCCAT------------------
>chr4B_1
GCACGAGAATAGTACCAAGCATAATTCATATAGAAGACAAAGCTAATAACAGGTTGAAGCTGCATATGGTACCCCTACGC
TTTCTTTCTTTTGCCTGACTAACCCTACTACGGGGTCCAATTTCTTGTGTGTAGCATATTCCTTTCTTAGCCAAGAAA-G
CCCAAACAAACAAATCCTACCCTCGCAACCTGTTTCCGCGCCATCTCACTGTAGTGTCGAACTAAATCTGGCCTTGCTGC
TAGACCCACGAATTTGTCAACATATTGTATACCTTCCTTTTTCTTCTGTCCCTGATAATCTAGCTGAAGTTGCCTATATG
TTAGTCTCTAGTC-------TCTACACCCTGACTCATGCATCCTTT-GCAAAAACCCAAGG-----------------AT
GCCCATATGTTAGTCTCTAGTCGCTCAAT--------ATGAATATAATCCGTGTTATTAGAGCATCTCTAGCAGACCCCG
CATAACGCCCCGACTAGCAAAATAACCGTCAAAATTTGGATCGGCGCGCGCTAGAACAGACCCTGCAAACGCGGCCGACC
CGTAAAAGTTTTTGAGGGACGCAGCAAAATCTAACCCGCGAATACGCGGGTCCCCCCCCTCCCCCCGGCCCGTCGGTGCC
CTGCATATAGCGGGAGCGGTTGATGGGAGGACATTTCAGCCCGCGCTTTTCCCCACCTACCACCTCCCCGCTCACGTCGC
CTCGCCGCCGGGCCGCCGCCCACGATTTCAGCGAAAGTAGCCGGCGGGATCACGCTGAAGGCCGCCACACGCACGAGGTT
GCCCTCCGCCACCCTGCTCCTGCGTCGGCGGGCCAAAAAGTTGCAGATCTAAGGCCCTTCGTCGCGGGCGGCCCGGATTT
GGCTTTTCCGGCCGCCGGTGGCTGTGCCAAGCGATGGAATGGTCGGGGAGCACCTCGCGCAGCCCCTGCAAAGTTCTATC
ACCGCATGCAGGTACGGGTTCGTCCTGTCGCCGCTGCCAACGGTTTTGCCGGCATGGATTCGACCGGTTGTCCGCAGGGC
TCGGCGCTCGCGCAGCGGCTCTATGGCTCGCCGATGCCGCTCATACAGTGTGACGCCTGCACGTGGACAGTGCTGCGGCT
AACTTCGGGCATGCCGAAGCACCCCGAATGGGTGTTCTTCAAATGCGAAAACGACGGGGTACGTGTTGTTTTCATTCGGC
TTTGGCACCGCATTCTTTGGTTCAATTGTGATAGCTCATTTCGAACATCATCATGTGTGTAGGAAGATGGATGCTCATTT
TGGTTTTGGAAAGGCGAATATTGATTTATTGATTGAAAGAAACTTAATAGGCGTTCGTGCACTCCTTAGTAGAATCGAAG
GCAATGAAACGGTTGTATGTACAATTAGAGGGAAAGCAACGTCTACTTCTTTAGAACCAAAAATGAGGAATGCAAAATAA
AGAATCCACAGATCAACAATGAATGCATGGAGAAGATATTGCTCCAACTAATGGGAGCAATTATGAAAGTTGGAAATCTC
CTAAAATGCATAATTGTGGTTCTTGTTTTTTTGGTCTTGCTATTCTAGCAAAGATTTGATGATGTCCTATGTATCCAATG
TTGTTGACAAAGCAAAAAAAATGCATTATGTTGTGTCAAATTGAAGTGTAAATTTAGGATTTGTGGGCGGCGGGAGCGGT
GCCAGACCAGACCCCGCAAAGCCGAGCATAATCCGCGAATATCCTTTTGTACGGGTCCGTTTTATACGGGTCCGTTTTAG
GGGTCTGCCTCTGTGGCCGTCCGCGCCGGCTCGTAAATCTATTTTTTCATGAATTGCAAATGCGTTTTACGGGTCGACGG
GATGGAGGGTCTGCTAAAGATGCTCTTACTCTGTAACAAA----------------------------------GGTGTG
GGATTCCGTTGTGTCGGGTGGATCGGGCGAGAGATTCGGCCCAAATCCATCGCTGGAAGCATCATCGGCGGGCAACACGT
GCGTGCGCCAGCAAGTTTCACCGGCCGACGTCATGGCGGCCTATG------CCCAATCCCCGGCGCCATCACGCCGGACG
TGAGAAATAACGAATCGACGATAACCACACACCCTCTTCC-------CGAAACCACAGAGAAGC----CCTCCCTCCCTC
CCTCCCTCCTCGACGGGCCATGGCCAAGCGTCACGCGCACAAGAGGACAAAACTCCGCAACCATATAAGCGGCCCCTCCC
CTCTCGTCTCCAAAAGTTCGAGCCCCTCATTTCTCATACCTACAAGCTCTGCTAGCTAGTTCATCTATCGCTAGCTTCCT
CATACCCATATCGCTACCAGATCTTCTTCCAAGACTGGTTAGCAGTCGA--------AGCTAGCTAGCTAGCTAGGGTTC
--GTCATCGAGCGCGAGCGC----------GCGATGATCATGTCCGACCCGGCCATGCTGCCGCCGGGCTTCCGGTTCCA
CCCGACGGACGAGGAGCTCATCCTACACTACCTCCGCAACCGCGCCGCCGAATCGCCCTGCCCCGTCTCCATCATCGCCG
ACGTAGATATCTACAAGTTCGACCCATGGGCCCTGCCATGTTAGTACCTGCCTGCTGCCTCCCCTCTGCACCAA------
---------------GCAGATCATGATTCATTCATTCATGCTG----ATGATCGATTCATTTGATTCCCACTTGCGCTAG
CTTAATTCTCATCTCAATAATCGTCCGTTGTTTCTCTTTGGGTCCCTTG-----------ATTAATTGCAGCCAAGGCTA
GCTACGGGGACAGGGAGTGGTACTTCTTCACGCCGAGGGACCGTAAGTACCCCAACGGTGTCCGGCCGAACCGCGCCGCG
GGTTCCGGCTACTGGAAGGCCACCGGCACCGACAAGCCCATCCGCTGCAGCGCCACCGGCGAGAGCGTCGGCGTCAAGAA
GGCCCTCGTCTTCTACAAGGGCCGCCCGCCCAAGGGCATCAAAACCAACTGGATCATGCACGAGTACCGCCTCGCTGCCG
CCGACGCACA---CGCCGCCAACACCTACCGCCCCATGAAGTTCCGCAACGCCTCCATGAGGGTAAGTCGCCACCACGTA
CGGTACAGCAATCAATCAAACATATAAACAAATTAAATCAACTGAAGTGAACACCCAAAACCCTAGTGTAGAGTATAAAA
CTACATATAGGAGTAGATCTTAGTATA-T--GTCAATTCGTGTCACGACAGTTGCATGCGTGGCACCGATCGATA-----
-----------------TGCACAGCGATTTTTCCGGGAGGGTGTACGGGTTCGTGTCGTCGGCACGTCAGGTTTTGCCAA
AATGGAATCGGGTTGTGCAGTGGCTCGCGAATGGACGCAAGAGCTGCT----TTAGTGTGTGTGTCTCGTTTAAAGAAAT
GTTCTTTAGGCATACTTGGCATGGTGGCGCGAAGTCAATAGATCCGACAATGATAGGCCTGATTGATGCATACGCGTGTT
AATGACTGATTCATCTTTCGCCTGGTTGATTGCAAGTTTTATTCATTTATTTCTAGA-TTTTTCATTAACTAAATTTAAT
ACTACGTGTGATCCGTCTTGGCATATACTATGTATGCAGCTGGATGACTGGGTGCTGTGCCGGATCTACAAGAAGACCAG
CCAAGTGTCGCCGATGGCGGTGCCGCCGCTGTCCGACCACGAGCTTGACGAGCCTTCTGGCGCTGACGCCTACCCCGTGT
CGAGCGCCGGCATGATCATGCAAGGCGGCGCCAGCGGCTACCCGCTGCAGGCCGCGGCCGTCGGCACACAGAGGATGCCC
AAGATCCCGTCCATATCAGAGTTGCTCAACGAGTACTCGCTGGCGCAGCTCTTCGAGGACAGCGGACACGCGCTGATGGC
GCGGCACGATCAGCACGCCGCCCTCCTCGGTCACCCCATCATGAGCCAATTCCATGTGAACAGCATGC------------
CGCAGCTTGGGCAGATGGATTCGTCAGCCTCAACGTCGGTGGCAGGCGAGGGTGCCGCCGGGAAGCGCAAGAGGCCGTCG
GAGGACGGTGACCGTAACGGGTCGACGAGCCAGCCAGCGGCGGCGGTGACGGGCAAGAAGCCCAACAGTTCTTGCTTGGG
TGCAACAACGTTCCAAACAGGCAACAACACCTTGCAGGGG------------------------ACGTTGCTCCGTTTCT
AACATGGGGATCGGATGAACTGACGGTGGATACACACTATACTACTTCAACCCCATCAGTCTGAATTATATACGACTGGC
GAACTGGTGATTTGAAGAACAATTATTGGGGTCTATTTCGCAAGATAGGTCTAAATTAGACAAATTATTGGTCAATATAT
--AGGGAAAGGGATTGTACTGCAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCGAACGACTAGC
-TAGGTCCATGGATCATACTAGTAGATATGGTTTGTAGTGTGTACACAATATTTTTGTCTCCAAGGCATGCAGTACAATC
ATGTACTTGAAGCTTACGACCGTGCTAAGAAGGGCTTGATCAGACTGAGATCGACAAACTGAAAGTCTGGAACATAAGAT
GTAAAACAGCG-AAATATATTCTTTAATGGAACCATTAATTCATCATA-----TCATGTTTTACTACTATTGTACTCAAG
GGTTTGTATACAGAAATGTTCAGCCATAGACGAAAAGATTATCGAATCCAAGAAAA-AAGAAGTAAAGAAAGGGACGAGA
AAATCACAAGTACGAGCACCTGCTCCAAGAACATAATTAGTCCATTCAGAAGAAGGGGAAATAGCCAGAAAAACACATAA
AGGACGGACGAAAGAAGAATATGAAACCCGGGCATTTAATAATTGGCCAAAAGCAGGCAAGTTGTGGATGGCGTTTAGCT
TTCAGTTCAGGAAGCGGATGGGTGACAGCCTTTTCATCCGTCTGAAGTTTTCTTCAGATTGGCCAAGAAGCCTTTTGTCC
ATGTACTCCCTCCATCCGAAAATGCTCGTCATTAAAATATATGTATTTAAATATATTTTAGTTTTAGATACATTCATTTT
CATCCATTTTGATGACAAATATTTTCGGATGGAGGAAGTACAATCTTGTCCGGCCACCAAGGCATCCCAATATTGCCATG
CACATCAACAAGTCCAGGAACATCCATGTCACGGATCAAACAAAAAATGGCCCATTTGGCGGCTCAGAGTGGGATCAATT
AATTGATGGATGGGTGCACTTCAGTGCAGTGCAGGTCCCCTGGAGCCACAGCCAGAGGACAGCTCTAATTATTGATTTAC
TGTAGCAGATCCATCATCAAGAATCACGATAA
>chr2B_1024
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--------------------------------------------------------GCTGCCGCCGGGGTTCCGGTTCCA
CCCGACGGACGAGGAGCTCATCCTGCACTACCTCCGCAACCGCGCCGCCGCCGCGCCGTGCCCCGTCCCCATCATCGCCG
ACGTCGACATCTACAAGTTCGACCCATGGGACCTCCCCTGTACGTTCTTAACCAATCAACCGATCAC--CGCTGTATGTA
TGTAGTCCCTGCTCTGCTCACCATGGTTCGACTCT----GATG----ATG----G-------------------------
---------------------------------------------------------------AACTGCAGCCCAGGCGG
TGTACGGCGACTGCGAGTGGTACTTCTTCAGCCCGCGGGACCGCAAGTACCCCAACGGCATCCGCCCCAACCGCGCCGCC
GGCTCCGGCTACTGGAAGGCCACCGGCACCGACAAGCCCATCCACGACGCCGCCACCGGCCAGGGCGTCGGCGTCAAGAA
GGCGCTCGTCTTCTACAAGGGCCGCCCGCCCAAGGGCACCAAGACGGCCTGGATCATGCACGAGTACCGCCTCGCCGCCG
ACCCCCTCGCCGCCGCCGTCAACACCTACAAGCCCATCAAGTTCCGCAACGTCTCCATGAGGGTACGT------------
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>chr2A_1024
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--------------------------------------------------------GCTGCCGCCGGGGTTCCGGTTCCA
CCCGACGGACGAGGAGCTCATCCTGCACTACCTCCGCAACCGCGCCGCCGCCGCGCCGTGCCCGGTCCCCATCATCGCCG
ACGTTGACATCTACAAGTTCGATCCATGGGACCTCCCTTGTAAGTTCTCAACCAATCAATCGATCAC--CGCTGTATG--
--TAGTCCCTGCTCTGCTCACCATGGTTCGGCTCT----GATG----ATGAATGG-------------------------
---------------------------------------------------------------AACTGCAGCCCAGGCGG
TGTACGGCGACTGCGAGTGGTACTTCTTCAGCCCGCGGGACCGCAAGTACCCCAACGGCATCCGCCCCAACCGCGCCGCC
GGCTCCGGCTACTGGAAGGCCACCGGCACCGACAAGCCCATCCATGACGCCGCCACCGGCCAGGGCGTCGGCGTCAAGAA
GGCGCTCGTCTTCTACAAGGGCCGCCCGCCCAAGGGCACCAAGACGGCCTGGATCATGCACGAGTACCGCCTCGCCGCCG
ACCCCCTCGCCGCCGCCGTCAACACCTACAAGCCCATCAAGTTCCGCAACGTCTCCATGAGGGTA---------------
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--------------------------------
>chr2A_1024
--------------------------------------------------------------------------------
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--------------------------------------------------------GCTGCCGCCGGGGTTCCGGTTCCA
CCCGACGGACGAGGAGCTCATCCTGCACTACCTTCGCAACCGCGCCGCCGCCGCGCCGTGCCCGGTCTCCATCATCGCCG
ACGTAGACATCTACAAGTTCGATCCGTGGGACCTCCCTTGTAAGTTCTCAACCAATCAAGTGATCAC--CGCTGTATG--
--TAGTCCCTGCTCTGCTTACCATGGTTCGGTTCT----GATAATGAATG----G-------------------------
---------------------------------------------------------------AACTGCAGCCCAGGCGG
TGTACGGCGACTGCGAGTGGTACTTCTTCAGCCCGCGGGATCGCAAGTACCCCAACGGCATCCGCCCCAACCGCGCCGCC
GGCTCCGGCTACTGGAAGGCCACCGGCACCGACAAGCCCATCCACGACCCCGCCACCGGCCAGGGCGTCGGCGTCAAGAA
GGCGCTCGTCTTCTACAAGGGCCGCCCGCCCAAGGGCACCAAGACTGCCTGGATCATGCACGAGTACCGGCTCGCCGCCG
ACCCCCTCACCACCGCCGTCAACACCTACAAGCCCATCAAGTTCCGCAACGTCTCCATGAGGGTA---------------
--------------------------------------------------------------------------------
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--------------------------------
>chr2D_1024
--------------------------------------------------------------------------------
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--------------------------------------------------------GCTGCCGCCGGGGTTCCGGTTCCA
CCCGACGGACGAGGAGCTCATCCTGCACTACCTCCGCAACCGCGCCGCCGCCGCGCCGTGCCCCGTCCCCATCATCGCCG
ACGTCGACATCTACAAGTTCGATCCATGGGACCTCCCTTGTAAGTTCTCAACCAATCAACCGATCACCGCGCTGTATG--
--TTATCCCTGCTCTGCTCACCATGGTTCGGCTCT----GATGATGAATG----A-------------------------
---------------------------------------------------------------AACTGCAGCCCAGGCGG
TGTACGGCGACTGCGAGTGGTACTTCTTCAGCCCGCGGGACCGCAAGTACCCCAACGGCATCCGCCCCAACCGCGCCGCC
GGGTCCGGCTATTGGAAGGCCACCGGCACCGACAAGCCCATCCACGACGCCGCCACCGGCCAGGGCGTCGGCGTCAAGAA
GGCGCTCGTCTTCTACAAGGGCCGCCCGCCCAAGGGCACCAAGACCGCCTGGATCATGCACGAGTACCGCCTCGCCGCCG
ACCCCCTCGCCGCCGCCGTCAACACCTACAAGCCCATCAAGTTCCGCAACGTCTCCATGAGGGTATGT------------
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--------------------------------
>SNPs
----S---------S------S---------------------------------------------------S------
---------------S-------------------------------------------S-------------SS---S-
------------------------SS------------------------------------------------------
---------S--------------------------------S----S--------------------------------
-------------SSSSSSS-------S-----------------S-SS------------SSSSSSSSSSSSSSSSS--
-S-------------------SS-SS----SS-S-SS----------S-------S--SSSSS-SSSSSSSS-SS--S--
--------------------------------------------------------------------------------
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----------------------S-S--------S-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------
------------------------------------------------------------------S-------------
------------S--------------------------------SSSSSS-----------------------------
----S-----------------------------SSSS--SSSSSSS-----------------SSSS------------
--S-----------------------S-----------------------------------------------------
-----------------------S--------------------------------------------------------
---------------------------------S---------------SSSSSSSS-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------S---------------------S--------------------------
-----S-------------------S-------------SSSSSSSSSSS--SSSSSSSS-------S------------
--------------------------------------------------------------------------------
-----S-----------S--------------------------------------------------------------
------------------------------------------------------------------------S-------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S----------
-S--------------------SSSSSS--------------------S---S---------------------------
---------------------------------S-------S----------------------S-----S---------
-------------------------S--S-S-----------------SSSS----------------------------
-------------------------S------------------------------------------------------
-------------S----------S-------S---S--------------------S------S---------S-----
--------S-----------------------------------------------------------------------
-----SS-----------------S----------------------------------------S--S-----------
----------------------------------------S---------------------------------------
-----------------S-----------------S--------------------------------------------
------------------------S------------------------------------S------------------
-------S----------------------------------S-------------------------------------
-------------------------------------------------------------------S------------
------------------------------------------SSS---S-------------------------------
-----------------------------------------------S------------S-------------------
--------------------------S------------S----------------------------------------
SS---S--------------SSSSS-SSSSSSSS--------------------------------S--------S----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------S--------------------------------------------------------------
---S-----S------------------------------S------S--------------------------------
------------S-------------------------------------------------------------------
-----------S--------------------------------------------------------------------
-----------------------------------------------------------------------S--------
--------------------------------------------------------------------------------
-------------------------------------------------------------------SS-----------
-----------------------------------------------------------------S--------------
-----------------------------------------------------------------------------S--
---------------S----------------
>forward_2147
--------------------------------------------------------------------------------
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-----------------------------------------------CGAAACCACAGAGAAGCCCT-------------
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--------------------------------
>reverse_4008
--------------------------------------------------------------------------------
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-------GGGGCAGATGGATTCGTCAG-----------------------------------------------------
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--------------------------------
>forward_2372
--------------------------------------------------------------------------------
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--------------------------------GCCTGGTTAGCAGTCGAAGT----------------------------
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--------------------------------
>reverse_4428
--------------------------------------------------------------------------------
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---------------------------GCGTCAGGTGTGTGTATCGA---------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------
