>input_sequence_44259
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------ATGTCGGAGAAGAAGCGCGCCCCCGGCCCGC
GCAAGGACGAGGTGGTGACCCGCGAGTACACCGTCAACCTCCACAAGCGCCTCCATGGATGGTATAACCCTCCCTCCTCA
CCCACCCCCTCCATTCCCGAGCTCCGCGCTCCCAGTAGATCCGCTAGTCAGATTCCACCTCCGCGCTTCACGGGGTGTCG
CCATGGCGCTTACGGGCTCGCCTGGTGGATTTGCTGGTGCGAAAAGGTTGCTGCCTGCGAGCACTATGTGGGCTCGCGAA
TGGCTGTTGCACCTGTATGGATCGAAATCCTTCCAGCTAGATGATACTAGGGATCGCATGACCGAGCGGTATCCCGATCT
CTTGGTTTCTGCTCTTGTATCTGATCCCACATT-TTTTTTCACGTGGATCTTCGATCTGTACCATTCTATTAGGTG---T
TAATCGGGTATAGTCAGGTGTCTGCCTTCTAAATCATGTGGCTTCGCACAGTTACATGCTCGAGAGATT-AACTCCGCTC
ATCGTTACACGTATGGCTTCTCTTGGTGCTACTATGTGTTCCATTTGGGCTGTATATTTCGCATTGATATTGTCTGTTAT
TTCTGGTTTCTATT----TGTTTTTTAATATGGTAAGTTTATTGAGCAATTGTACCCGGACATAGTCAGGTATCTGTCTT
GAAATTGTGGTTGATACAGTTACTTGTCCGGTACATTGATGTTGCTCATCGTTACATGTGTTGCCTCCATATGCTTTCAC
GTGTTCCATTTGGGCGCTACATTAAAACTAAACTTTATTATCTATTTGATCGTATAATCTGCCCATTATGTCCGTTCATA
GTCAGGTATCTGTCTTAAAATTGTGGTTGATACAGTTACATGACCGGTAAATAGATGTTGCTCATCGTTACATGTGTTGC
C-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------ATCAAGTGCTACCACGTGTTCCATTTGGGCTCTACATTGAAACTAGATTTTGTCATTTGATCA
TAGCTTGTCCATTATGCCCGGTCATAGTCAGGTATCTGTC----------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------TATAAATCTAGTGGTTGATACAGTTACA
TGCCCGGTACATAGATGTTGCTCATCGTTACACTTGCTGCCTTCATATGCTGTCATGTGTTCCATTTGGGCTCTACATTG
AAACTAGATTGTTACTTGATCTTATAGCTAGTCCATTATGCCCTGTCATAGTCAGGTATCTGTCTTTAAATCTTGTGGTT
GATACAGTTACATGCCCGGTACATAGATGCTACTCATCGTTACACTTGCTGCCTTCATATGCTGTCATGAGTTCCATTTG
GGCACTACATTGAGATGAATTATATTTTCTCCACAATTGCTTTGTTTTG-TTTGTGTTTATATATATATATATTACATTT
CTATGTTGCTTGTGTTGTAATGTTCCATCTTTCTTTCTCATGCTTTCTTTGTGGTTTACAAAATCCTCTATTTGTATCTA
TCACTAATGGCAACTTCATTCTATTGAACAGCACCTTCAAGAAGAAGGCACCAAATGCCATCAAGGAGATCAGGAAGTTT
GCACAGAAGGCCATGGGAACCAACGATGTCCGCATTGACGTGAAGCTCAACAAGCACATCTGGAGCAGCGGCATCAGGAG
TGTCCCTAGGAGAGTCCGTGTCAGGATTGCCCGCAAGAGGAACGACGAGGAGGATGCTAAGGAGGAGCTGTACTCTCTGG
TCACAGTTGCTGAAGTCCCCCAGGAAGGTCTTAAAGGTTTGGGTACCAAGGTTGTGGAGGATGAGGACTAA---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------
>chr6D_1_TraesCS6D01G262100
GCTACTCTGTTATAAATCCTCCATTTGTACTGTGGTGTCAGCATTACTGATCCAGGGATGACACTGGTGCACAGCAGCAC
AGACTGTTTGAGGTCTGGTCGCTACATCCCATGGTATGGTAAACATTTTCGAGTACGGCGGCAGCTCGCGCGGCTCGCGG
GCAGCGACCGGAAGTCCGTGGCGAGAGCTGAAACTTCTCTCCCGCCAACCC--TTTTTGTTTTGGAGGACCCTGCAAAAA
GAGGGAGGGATCCGGTAGATATAGCGGATTCGGCCCGAACTATGCAGGATCCCGAAAAAAATAGCGGATGAGTGATTTTA
CAGGATCTGTTCGGGATGAAAAATCGGCACCCATCCACAATATCAACTATTATTATGAACCGGTTTGCGCGATGGGCGAG
AGATGCTCTTAGTCTGTTTGCTCCATAAAAAAATGGAA-----AAGAATAATAGCAAATTGGACGATTTGCTTCCTCTCG
ATTGCCAATGCTATCCTCCAAAATCTTGTTTATTAGGGAGAACAAAGTTTACCTAGTGTGTCGAAATAATTAACAATTCA
GCCGTACCCATTTTTGGCCATGACCTAAATCTTTGCTTTTGCTTAGATTTTTTCCCCCGATGTGACTATGCTCCTTGGTC
AACGTCACTCCATTTTTCCAGCCAGAATTCGCCAAATTATGTGGAGGCAAACATTAATCAAAGTATCAAACTACCGGCAA
CAAAGTTTTTGGTGGGATTCGCTCGGGCCCAAAACCAAACACACTCCAATTTCATAACAGATTCACCTACAAAAAGAAAA
CAAAAACATAACAC-ATGGACGAAGGGCCTACTTAAACGGGCCGTCACGAAACATTCCGGAGAGGCCCAGTCAGCCAGCA
AGCCCTAATTTCCGCC-CTATAAAGCCGCGACCCCCTGCGACCTGGCCTTCCCCACTAGGGTTTATCTCCTATCGCCGCA
GCCTCCACCGAAGCCAAGAGAGGAGCAGGGCGAAAGGAGGCCGTCGGAGATGTCGGAGAAGAAGCGCGCCCCCGGCCCGC
GCAAGGACGAGGTGGTGACCCGCGAGTACACCGTCAACCTCCACAAGCGCCTCCATGGATGGTATAACCCTCCCTCCTCA
CCCACCCCCTCCATTCCCGAGCTCCGCGCTCCCAGTAGATCCGCTAGTCAGATTCCACCTCCGCGCTTCACGGGGTGTCG
CCATGGCGCTTACGGGCTCGCCTGGTGGATTTGCTGGTGCGAAAAGGTTGCTGCCTGCGAGCACTATGTGGGCTCGCGAA
TGGCTGTTGCACCTGTATGGATCGAAATCCTTCCAGCTAGATGATACTAGGGATCGCATGACCGAGCGGTATCCCGATCT
CTTGGTTTCTGCTCTTGTATCTGATCCCACATT-TTTTTTCACGTGGATCTTCGATCTGTACCATTCTATTAGGTG---T
TAATCGGGTATAGTCAGGTGTCTGCCTTCTAAATCATGTGGCTTCGCACAGTTACATGCTCGAGAGATT-AACTCCGCTC
ATCGTTACACGTATGGCTTCTCTTGGTGCTACTATGTGTTCCATTTGGGCTGTATATTTCGCATTGATATTGTCTGTTAT
TTCTGGTTTCTATT----TGTTTTTTAATATGGTAAGTTTATTGAGCAATTGTACCCGGACATAGTCAGGTATCTGTCTT
GAAATTGTGGTTGATACAGTTACTTGTCCGGTACATTGATGTTGCTCATCGTTACATGTGTTGCCTCCATATGCTTTCAC
GTGTTCCATTTGGGCGCTACATTAAAACTAAACTTTATTATCTATTTGATCGTATAATCTGCCCATTATGTCCGTTCATA
GTCAGGTATCTGTCTTAAAATTGTGGTTGATACAGTTACATGACCGGTAAATAGATGTTGCTCATCGTTACATGTGTTGC
C-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------ATCAAGTGCTACCACGTGTTCCATTTGGGCTCTACATTGAAACTAGATTTTGTCATTTGATCA
TAGCTTGTCCATTATGCCCGGTCATAGTCAGGTATCTGTC----------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------TATAAATCTAGTGGTTGATACAGTTACA
TGCCCGGTACATAGATGTTGCTCATCGTTACACTTGCTGCCTTCATATGCTGTCATGTGTTCCATTTGGGCTCTACATTG
AAACTAGATTGTTACTTGATCTTATAGCTAGTCCATTATGCCCTGTCATAGTCAGGTATCTGTCTTTAAATCTTGTGGTT
GATACAGTTACATGCCCGGTACATAGATGCTACTCATCGTTACACTTGCTGCCTTCATATGCTGTCATGAGTTCCATTTG
GGCACTACATTGAGATGAATTATATTTTCTCCACAATTGCTTTGTTTTG-TTTGTGTTTATATATATATATATTACATTT
CTATGTTGCTTGTGTTGTAATGTTCCATCTTTCTTTCTCATGCTTTCTTTGTGGTTTACAAAATCCTCTATTTGTATCTA
TCACTAATGGCAACTTCATTCTATTGAACAGCACCTTCAAGAAGAAGGCACCAAATGCCATCAAGGAGATCAGGAAGTTT
GCACAGAAGGCCATGGGAACCAACGATGTCCGCATTGACGTGAAGCTCAACAAGCACATCTGGAGCAGCGGCATCAGGAG
TGTCCCTAGGAGAGTCCGTGTCAGGATTGCCCGCAAGAGGAACGACGAGGAGGATGCTAAGGAGGAGCTGTACTCTCTGG
TCACAGTTGCTGAAGTCCCCCAGGAAGGTCTTAAAGGTTTGGGTACCAAGGTTGTGGAGGATGAGGACTAAACCCCCTGT
CTGTCGTATCGATCAGTTAGAACTTAATACATATCTGCTGAGAGCATATTGGGAAGTCTTGCTTTAGCTTATTGTTATCT
ACTGTTCATGATGTTCCATGACTTCTTGATAGAAGATTTGAGACGTTGGATATTTTGTTCAAGTGCTTGAAGTTTTGACT
TGTTGTTTGACTCTGGTCGTTCCGTCATTCCTTGTGAT----------------GATATTACCATTGAGACTGGTGAACT
-----CTAGGAACTTCATAGGTTT---------GAGAATTCTTGATCGTAGATCTTAATGAGGAACTCACTTGTGGCAAT
GAGTTGAGATATGCGCCTAGTAAATCGTGTAGTTC---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------TTGAAAGCAAAAGCTGAAATCCCCAGCTTCCCAGG---------------GTCAAGCAATTGAGGGGATGCGTC
TAGCCAAATGTGGAT-GATCATATGTAGACAGCCATGGTACAATTGTGGTCAATGTGCAGAGAGTGATTATCTTCCTGTC
AATTCATTCATTAAGGAACTGTACTCATCTTGACGTCAATTCATTCATTAAGAAACAGC---------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------CAAAAGACAGGAAA
CACTAATGTTCGGATGAGCTTCTAGCTTTA----GGAGGCTTCATGCTAGAACCATGGTCTGGCTAGAATCCTTCCTAGA
TGATCTTGAGAATTCCTGCGTGGCAGATTATAATATTCCTAATGATTAATAAAGTCCACAAAGAGACTTTTGTGTGGTTT
CACACTCTATCATCGAGTTACACCGTCGTAAGCAAATGAGTCTACAAAAAGTGGTAATCATATCGACCTCGGTAAACTAG
CCGGCATGTTATTCTGGAGCCATTGTTTGGTATAGCATCTAACGTGGGTGGTATAACATCCAATTCGAATGGAGGGGAAT
GAG---AGCTCAGCAGTACCAGCCCGTGATAGAAGTTTGTATTTTCTGGAAAAGAATTTAGCTCCAAGGATGCTTCTCAA
TGGTCCATTGTGATACTGGAAAATCAGCCAGGTTAAGAGCTGCACCCCATGACAGTACTAAT
>chr6B_110
--------------------------------------------------------------------------------
-----------------------------CATGGTATGGGAAACATTTTCGAGTACGGCGGCAGCTTGATCGGCTCGCGG
ACGGCGACCGAAAGTCCGTGGCGAGAGCTGAAAGTTCCCTCCCGCCAACCGTTTTTTTGTTTTGCAGGACCCTGCAAAAA
GAGGGAGGGATCCGATAGATATAGCGGATTCGTCCCGAACTATGCAGGATCCCCCAAAAAATAGCGGACGAGTGATTTTA
CAGGATCTGTTCGGGATGGAAAATCGGCACCCGTCCACAGTATCAACTATTATTATGAACCGGTTTGCGCGGTCGGCGAG
AGATGCTCTTAGTCTGGTTGCTCCAAAAAATAAATA----AAGAAGAATAATAGCAAATTGGACGATTTGCTTCCTCTTG
ATTGCCAATGCTATCCTCCGAAATCTTGTTTATTAGGGAGAACAAAGTTTACCTAGTGTGTCGAAATAATTAACAATTCA
GTCGTACCCATTTTTGGCCATGACCTAAATCTTTGCTTTTGCTTAGATTTTTTCCCCTGATGTGACTATGCTCCTTGGTC
AACGTTACTCCATTTTTCCAGCCAGAATTCGCTAAATTATGTGGAGGCAAACATTAATCAAA--------CTACTAGCAA
CAAAGTTTTTGGTGGAATTCGCTTGGGCCCAAAACCAAACACACTCCAATTTCATAACAGATTCACCTACAAAGAGAGAG
AGAAAAACATAACAAATGGACGAAGGGCCTAGTTAAACGGGCCGTCACGAAACATCCCGGAGAGGCCCAGTCAGCCAGCA
AGCCCTAATTTCCACCGCTATAAAGCCACGACCCCTTGCGACCTGCCCTT-CCCACTAGGGTTTATCTCCTCTCGCCGCA
GCCTCCATCGAAGCCAAGAGAGGAGCAGGGCGAAAGGAGGCCGTCGGCGATGTCGGAGAAGAAGCGCGCCCCCGGCCCGC
GCAAGGACGAGGTGGTGACCCGCGAGTACACTGTCAACCTCCACAAGCGCCTCCATGGATGGTATAATCCTCCCTCCTCG
CCCATCCCCTCAATTCCCGAGCTCCGCGCTCCCGGTAGATCCGCTAGTCAGATTCCACCTCCGCGCTTCACGGGGTGTCC
CCATGGCGCTTACGGGCTCGCCTAGTGGATTTGCTGGTGCGAAA-GGTTGCTGCCTGCGAGCACTATGTGGGCTCGTGAA
TGGCTGTTACACCTGTATGGATCGAAATCCTTCCAGCTAGATGATAGTGGGGATCGCATGACCGAGCGGTATCTCGATCT
CTTGGATTCTGCTCTTGTATCTGATCCCACATT-TTTT--CATATGGATCTTCGATCTGTACCATTCGATTAGGTG---T
TAATCGGGTATAGTCAGGTGTCTGCCTTCTAAATCATGTGGCTGTGCACAGTTACATGCTCGAGAGATTTAAGTCTGCTC
ATCGTTACACGTATGGCTTCACTCAGTGCTACTATGTGTTCCATTTGGGCTGTATATTTCGGAATGATATTGTTTGTTGT
TTCTGCTCTCTAAC----TGTTTGTTCATCTATTAAGTTTATTGATCAGTTGTACCCGGACATAGTCAGGTATCTGTCTT
GAAATTGTGGCTGATACAGTTACTTGTCCGGGACATCGATGTTGCTCATCGTTACATGTGTTGCCTCCATATGCTTTCAC
GTGTTCCATTTGGGCGCTACATTAAAACTGCACATTATTATCTATTTGACTATATAATCTGCCTATTATGTCCGGTCATA
GTCAGGTATCTGTCTTAAAATTGTGGTTGATACAGTTACATGCCCGGTAAATAGATGTTGCTCATCGTTACATGTGTTGC
C-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------ATCAAATGCTACCACGTGTTCCATTTGGGCTCTACATTGAAACTAGATTTTGTCATTTGATCT
TAGCTTGTCCATTATGCCCGGTCATAGTCAGGTATCTGTCTATAAATCTAGTGGTTGATACAGTTACATGCCCGGTACAT
AGATGTTGCTCATCGTTGCACTTGCTGCCTTCATATGCTGTCATGTGTTACATATGGGCTCTACATTGAAACTAGATTGT
CATTTTATCTTATAGCTAGTCCATTATGCCCGGTCATAGTCAGGTATCTGTCTATAAATCTAGTGGTTGATACAGTTACA
TGCCCGGTACATAGATGTTGCTCATCGTTGCACTTGCTGCCTTCATATGCTGTCATGTGTTACATATGGGCTCTACATTG
AAACTAGATTGTCATTTTATCTTATAGCTAGTCCATTATGCCCGGTCATAGTCAGGTATCTGTCTTTAAATCTTGTGGTT
GATACAGTTACATGCCCGGTACATAGATGCTGCTCATCGTTACACTTGCTGCCTTCATATGCTGTCATGTGTTCCATTTG
GGCACTACATTCAGATGAACTATATTTTCTCCACATTTGCTTTGTCTTG-TTTGTGTTT-------TATATATTACATTT
TTACATTGCTTGTGTTGTAATGTTCCATCTATCTTTCTCATGCTCTCTTTGTGGTTTACAAAATCCTCTATTTGTATCAG
TCACTAATTGTAGCTTCATTCTATTGAACAGCACCTTCAAGAAGAAGGCACCAAATGCCATCAAGGAGATCAGGAAGTTT
GCACAGAAGGCCATGGGAACCAACGATGTCCGCATTGACGTGAAGCTCAACAAGCACATCTGGAGCAGCGGCATCAGGAG
TGTCCCGAGGAGAGTCCGTGTCAGGATTGCCCGCAAGAGGAACGACGAGGAGGACGCTAAGGAGGAGCTGTACTCTCTGG
TCACAGTTGCTGAAGTCCCCCAGGAAGGTCTTAAAGGTTTGGGTACCAAGGTTGTGGAGGATGAGGACTAAACCCCCTGT
CTGTTGTTTCAATCAGTTAGAATTTAATACATATCTGCTGAGAGCATATTGGGAAGTCTTGCTTTAGCTTATTGTTATCT
ACTGTTCATGATGTTCCATGACTTCTTGATAGAAGATTTGAGACGTTGGATATTTTGTTCAAGTGCTTGAAGTTTTGACT
TGTTGTTTGACTCTGGGCG-TCCGTCATTCCTTGTGATTGGCCTGTTTTGTAGTGATATTACCTTTGAGAC--GTGAATT
CCTTGCTAGGAACTCCCTAGGCTTTGTTCATCGGAGGATTCTTGATCGTAGCTCTTAATGAGGAACTCAGTTGTGGCAAT
GAGTTGAGATATGCGCCTGGTAATCATCGTGTATTTCTGTAAATGGTCCTGCAAGCCCCATTTGGCCTAACGGAAGCGGA
CTCTGCTTGCAGTTCCTTTGGCAACTGTTGCTTCGGTTAACCGGACAGGCGTATGTATAGATACCTCTCTAATGGCTTCT
ATATATAGTATATGTAATCACATCATCAGTCATCAATAAAGATAACAAACTGCTCGCTTTCACACCATGTCCATTGTCTC
GTTCACTTTGCTCTAAACAGTTTTTGAACAAATTCTGATGATCAAACCATTACGTCAGGAGCTTACATTCCCCTGGGGCG
CAACAGTTGAAAGCAAAAGCTGAAGCCCCCAGCTTCCCATGTTAACACCTCTGAGGTTATGACTACAAACATCATGCAAA
A-------------------ATATGTAGAGAGCCATGGTACAATTGTGGTCA---TGCAGAGAGCGATCATCTTCCTGTC
AATCCATTCATTCAGAAACCGTACTCATCTTCCCGTCAATTCATTCATTAAGAAACTGTAAACCCCCCTTGTTTCAATCA
TCGGATACGCCTCTGAGGTTATGACTACAAACATCATGCAAAAATAAACTAAAACAGCCAC--CCCATGTCTTCTTCGAT
AATCCAGGAACTGAAACAAACGGAATCGAACAGCCAGCAAACTACACTGTCTTTTTAACACCCCAACAGAAGACA-GAAA
CACTCATGTTTGGATGAGCTTCTAGCTTCCTTTGGGAGGCTTCATGCTAGAACCATGGTCTGGCTAGAATCCTTCCTAGA
TGATCTTGAGAATTCCCGTGTGGCAGATTATAATATGCCTAATGATTAATAAAGTCCACAAAGAGAACCTTTGTGGCTT-
--CACACTATCGTCGAGTTATACCGTCGTAAGCAAATGAGTCTACAAAGAGTGGTAATCATATCGAGCTCGGTAAACTAG
CCGGCATGTTAATCTGGAGCCATTGTTTGGTATAGCATCTAACGTGCGTGGTATAACATCCAATTCGAATGGAGGGGAAT
GAGGAGAGCTCAGCAGTACCAGCCCGTGATAGAATA-TGTATTTTCTGGAAAAGAATTTAGCTCCAAGGAAGCTTCTCAA
TGGTCCATTGTGGTACTGGAAAATCAGCCAGGTTAAGAGCTGTACCCCATGACAGTACTAAT
>chr6A_407
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------TTAGACTGTTCGCTCCATAAAAAAAATAGTTCAAGAGGAATAATAGCAAATTGGACGATTTGCTTCCTCTCA
ATTTCCAATCCTATCCTCCAAAAA-------------------AAAGTTTACCTAGTGTGTCGAAATAATTAACAATTCA
GCCGTACCAATTTTGGGCCATGGCCTAAATCTTGGCTTTTGCTTAGATTTTTTT-CCCGATTTGACTATGCTCGTTGGTC
AACGTTATTCCATTTTTCCAGCCAGAATTCGCCAAATTATGTGGAGAGAAACATTA--------ATCAAACTACCGGCAA
CAAAGTTTTTGGTGGAATTCGCTTGGGCCCAAAACCAAACACACTAAAATTTCATAACAGATTCACTGACAAAAAGAAAG
AAAAAAACATAACAGATGGACGAAGGGCCTACTGAAACGGGCCGTCACGAAACATCCCGGAGAGGCCCAGTCAGCCAGCA
AGCCCTAATTTCCCCCGCTATAAAGCCGCGACCCCTTGCGACCTGCCGTTCCCCACTAGGGTTTATCTCCTCTCGCCGCA
GCCTCCACCGAAGCCAAGAGAGGAGCAGGGCGAAAGGAGGCCGTCGGAGATGTCGGAGAAGAAGCGCGCCCCCGGCCCGC
GCAAGGACGAGGTGGTGACACGCGAGTACACCGTCAACCTCCACAAGCGCCTCCATGGATGGTATA---CTCCCTCCTCA
CCCGCCCCCTCCATTCCCGAGCTCCGCGCTCCCGGTAGATCCGCTAGTCAGATTCCGCCTCCGGGCTTCACGGGGTGTCG
CCATGGCGCTTACGGGCCCTCCTGGTGGAGATGCTGGTGTGAAA-GGTTGCTGCCTGCGAGCACTATGTGGGCTCGTGAA
TGGCTGTCACACCTGTATGGATCGAAATCCTTCCAGCTAGATGATACTAGGGATCGCATGACCGAGCGGTATCCCGATCT
CTTGGATTCTGCTCTTGTATCTGACCCCACATTATTTT--CACGTGGATCTTCGATCTGTGCCATTCTATTAGGTGTTAT
TAATCGGGTATAGTCAGGTGTCTGCCTTCTAAATCATGTGGTTTCGCACAGTTACATGCCCGAGAGATT-AACTCCGCTC
ATCGTTACACGTATGGCTTCTCTTGGTGCTACTATGTGTTCCATTTGGGCTGTATATT----------------------
--CTGCTTTCTATTTGTTTGTTTGTTAATCTAGTAAGTTTATTGATCAGTTGTGCCCGGACATAGTCAGGTATCTGTCTT
GAAATTGTGGTTGATACAGTTACTTGTCCGGTACATTGATGTTGCTCATCGTTACATGTGTTGCCTCCATATGCTTTCAC
GTGTTCCATTTGGGCGCTACATTATAACTAAACATTATTATCTATTTGATCATATAATTTGCTCATTATGCCCGGTCATA
GTCAGGTATCTGTCTTAAAATTGTGGTTGATACAGTTACATGCCCGGTAAATAGATGTTGCTCATCGTTACATGTGTTGC
CTCCATATGCTTTCACGTGTTCCATTTGGGCGCCACATTAAAACTAAACATTATTATCTATTTGATCATATAATCTGCCC
ATTATGTCTGCTCATAGTCAGGTATCTGTCTTAAAATTGTGGTTGATACAGTTACATGACCGGTAAATAGATGCTGCTCA
TCGTTACATGTGTTGCCATCAAATGCTACCACGTGTTCCGTTTGGGCTCTACACTAAAACTAGATTTTATCATTTGATCT
TT-CTTGTCTATTATGCCCGGTCATAGTCAGGTATCCGTC----------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------TATAAATTTAGTGGTTGATACAGTTACA
TGCCCGGTACACAGATGTTGCTCATCGTTGCACTTGCTGCCTTCATATGCTGCCATGTGTTACATATGGGCTCTACATTG
AAACTAGGTTGTCATTTGATCTTATAGATTGTCCATTATGCCCGGTCATAGTCAGGTATCTGTCTTTAAATCTTGTGGTT
GATACAGTTACATGACCGGTACATAGATGCTACTCATCGTTACACTTGCTGCCTTCATATGCTGTCATGTGTTCCATTTG
GGCACTACATTGAGATGAAATATATTTTCTCCAC--TTGCTTTGTTTTGTTTTGTGTTT-------TATATATTACATTT
CTATGTTGCTTATGTCGTAATGTTTCATCTATCTTTCTCATGCTTTCTTTCTGG-TTACAAAATCCTCTATTTATATCAA
TCACTAATGGTAGCTTCATTCTATTGAACAGCACCTTCAAGAAGAAGGCACCAAATGCCATCAAGGAGATCAGGAAGTTT
GCACAGAAGGCCATGGGAACCAACGATGTCCGCATTGACGTGAAGCTCAACAAGCACATCTGGAGCAGTGGCATCAGGAG
TGTCCCGAGGAGAGTCCGTGTCAGGATTGCCCGCAAGAGGAATGACGAGGAGGACGCTAAGGAGGAGCTGTACTCTCTGG
TCACAGTTGCTGAAGTTCCCCAGGAAGGTCTTAAAGGTTTGGGTACCAAGGTTGTGGAGGATGAGGACTAAACCCCCTGT
CTGTCGTATCGATCAGTTAGAACTTAATACATATCTGCTGAGAGCATATTGGGAAGTCTTGCTTTAGCTTATTGTTATCT
ACTGTTCATGATGTTCCATGACTTCTTGATAGAAGATTTGAGACGTTGGATATTTTGTTCAAGTGCTTGAAGTTTTGACT
TGTTGTTTGACTCTGGTCG-TTCGTCATTCCTTGTGAT----------------GATATTACCTTCGAGGCTGGTGAACT
CCTTGCTAGGAACTTTATAGGTTT---------GAGACTCC--------------------------------TGGCAAT
GAGTT---ATATGCGCCTGGTAAACATCGTGTAGGTTTGAGACTCGATCATGCAGGAAGTTTGTGTTTGGAATAGTTGTG
GGATCCCTGGTTC-------------------------------------------------------------------
------------------------------------------------------CGCCATCACATCTTGTTCATTGTCTC
GTTTTCTTTAGATCTTCTC---------------------------------CGTCAGGAGCTTACAACCCCCTGGGGCG
CAACAGTTGAAGCAAAAAAGCTTTACCCCCAACTTCCCATGTCAACAATGTTCAATGTCCAGCAATTGAGGGGATGCATC
AAGCCCAATGTGGATGGATCATATGTAGAGAGCCATGGTACAATTGGGGTCA---TATG---------------------
--------------------------------------------------------------------------------
-----------TCTGAGGTTATGACTACAAACATCATGCAAAAATAAACTAAAACAGCCAAAACCCATGTCTTCTTTGAC
AATCCAGGAACTGAAACAAAGGGAATCGAACAGCCAGCAAAGTACGCTGTC-TTTTAACACCCCAACAGAAGACAAGATA
CACTCC--TTTGGATGAGCTTCTAGCTTCCTTTGGGAGGCTTCATGGTAGAACCATGGTCTGGCTAGAATCCTTCCTAGA
TGATCTTGAGAATTCCCGTGTGGCAGATTATAATATGCCTAATGATTAATAAATCCCACAAAGAGACCCTTTGTGGCTT-
--CACACTATCATCGAGTTACACTGTTGTAAGCAAATGAGTCTACAAAGAGTGGTAATCATATTGACCTCGGTAAACTAG
CCGACATGTTATTCTGAAGCCACTGTTTGGTAGAGCATCTAACGTGCATGGTATAACATCCAGTTCGAATGGAGGGGAAT
---GAGAGCTCAGCAGTACCAGCCCGTGATAGAAGTTTGTATTTTCTGGAAAAGAATTTAGCTTCAAGGAAGCTTCTCAA
TGGTCCATTGTGGTACTGGAAAATCAGCCAGGTTAAGAGCTGC-CCCCATGACAGTACTAAT
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------S--------------------------S-SS----------
S-S-------S----------------------S---S------------S-------------S---------------
--------------S-----------------S--------------------SS-------------S-----------
------------------S-------------S------S-------------------------------S-S------
---------------------------------SSSSS------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----S--------------------------------------------------------SS----------------
---------------S-------S-------------------------------------------------------S
S-----SSSS-SSS-----------------------------------------S------------------------
-------------S---------------------S---------S-------------------------S--------
--------------------------------------------------------------------------------
-------------------------------------------------------------------S------------
---------------------------------S----------------------------------------------
--------------------------------------------S-------------------------------S---
--------S-----------------------------------------------------------------------
-----S--------------------------------SS----------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------S-S---------S----S-
-----S-----------------S-----S-S-------------S--S-------------------------------
--------------------------------------------------------------------------------
---------------------------------S-----------------S----------------------S-----
------------------------------------------S-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------S--------------------------------------------------------S
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------S-------------------------------S---S--------------
------------S-S----------------------------S------------------------------------
---------------------------------------------------------------------S----------
-------------------S---------------S-----------------------SSSSSSS--------------
------------------------------S-----------------------------------------------S-
----------S-S-------------------------------------------------------------------
--------------------------------------------------------------------------------
------S-----------------------------------------------S-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S-------------------------------------------S----------------
---------------------------------------------------S-----------------S----------
------------------S-----SSSS--SSS-S---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------S-------------S-------------------S-----------------S--
S----S-----------------------S----------------------SSS---------S---S-----------
---S--------S--S---S-----------SS-----------------------S-S---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S------S----
----S-----S-----------------SS--------------------------------------------------
----------------S-S-----------------S------------------------------SS--SSSS-S--S
SS---S------------------------------------------S-------------------------------
----------------------------------------------S---------------------------------
----------------------------------------------------------------------S---------
------------S-------------------------------------------------
>forward_103
--------------------------------------------------------------------------------
---CTGTTTGAGGTCTGGTCGCT---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------
>reverse_1277
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------CGAA
TGGCTGTTGCACCTG-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------
>forward_360
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------AAATCGGCACCCATCCACAA----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------
>reverse_2430
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------ACACTTGCTGCCTTCATATGC------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------
>forward_894
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------CCAGCA
AGCCCTAATTTCCG------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------
>reverse_2967
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------TAGGAGAGTCCGTGTCAGGA------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------
>forward_1245
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------TGGATTTGCTGGTGCGAAAA-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------
>reverse_3800
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------GGGTCAAGCAATTGAGGGGA---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------
