>input_sequence_44237
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------ATGGCGGG
CGCGCTGGGCGTGAAGGCGACGCCCTTCACCTACGCGGCGCACGCGCTGGGCGCGGCAGCGGCGGCCATGGTGCTCGTCT
GGTGCATCCACTTCCGCGGCGGCCTCGCCCTCGAGGCCGTCAACAAGAACCTCATCTTCAACGTGAGTCGTCGCTCTGTT
TTCTTCTTCTTCTTTTCCCCTGTTGCAAACCGCCCCCGTCGGATAGGCACAGGCTTACCATCGCTTCAGTTGCAAGTCAC
ATCACCGTGGAAGCTTTAGGGACAGAGAGAATTATTCGGTATACCTCCCTTGAGGTTGTAGGG-AAATATTATTCTTCAC
CCCGGCCCCGTATCACATGAATAGCCTCGCCTCAGCTCTGGCTTCGAGCTGTTGGTTTCTTGGCTTGTGTCCGATTGATT
CACTGTGCTAAAACGTCTTACATTTAGAAACGGAGGTGGTAAACTGAACTGTTAAAACATCTTACGTTTTGGAACAGAGG
TAGTGGTATCTAGGGGAGAACCATGCTCGAAATGGGGATCGGGGGG-ACAAGCAAAAATGCTGCAATTGAGAAATTCAAC
TGCTCTTGAATCTCGATTGCCCTGCAGCTAGCTCATGTTCCTTGTCAATGAATGTTCTGGCACTTGTAGATCAGAATT--
--TAATTGGACCCAATAAAATAGCGGTGAGACTTCAAAGCG-TGATAAGATTGGACAGAGCACGTGGAAAGCCATCC---
-------------------------------------------------------------------------TTATCCT
CAGATTTATATTTCGGGTACTAGTGCAAGTTTT-------------------TGCACAGGAGCCTAATTAAATTCTCTGC
CCTCTTGCCTGTCAGTCCCGAAAGGATCACTGAAAAACCCAGACTGGGTTGATTGATGCTGTTTAAATTAGGA---TTTA
TGGCCGTAGTGTGGCATAATTTAACTTAATTGCCGTTGTTATTTCGAGACCATCAGTTCAATTGTTCATATTTTTCTTGT
GCTGTAAAATGCAGGTTCACCCCGTTCTTATGCTGATCGGCTTCATTATCCTTGGCAGTGAAGGTAAGGCTAAAGAACCG
TACAAGAATTCCCTGATCTTTTTTTGCCTCTGTCGGTGGTACTGTACAGTGTACACATCTACTAGA-ACACAGATCGGTT
TA-TTCTCTCAAATAATCCGTCCTGGCAGCTATAATGGTCTACAAGGTATTTCCGGGACTGAGCCACGACACGGCCAAGC
TGACCCACCTGATCCTCCACGCGATCGCCATCGTCCTCGGCGCCGTCGGGATCTACTGCGCCTTCAAGTTCCACAACGAG
AGCGGGATCGCTAACCTCTACAGCCTGCACTCCTGGCTCGGGATCGGAGCCATTTCTCTCTACGGAATCCAGGTAACTCG
AACCGGCCGTTGCCATGGCCTGCGCATGCAGGATTTTGCAGAGTTTTCTTCCGGCGGATCGGCTAATGTAAGGTGTGCTC
G-ATCTGCAGTGGATATTTGGGTTCGTGACGTTCTTCTTCCCCGGCGCGGCGCCGGACGTGAGGCGCGGGGCTCTGCCGT
GGCACGCGCTCTTCGGGCTCTTCGTCTACGTGCTCACGCTGGCCACGGCGGAGCTCGGGTTCCTGGAGAAGATGACGTTC
CTGCAGAGCTCCGGGCTCGACAAGTACGGCCCGGAGGCGCTCCTCGTCAACTTCACGGCCCTCGTCGTCGTGCTCTTCGG
TGCCGCCGTGGTCGTCGCTGCCGTCGCTCCCGCGGCTAAGGTGGAGGAGCCGGAGGGATATGCTCCGATCCCAGTCATCG
GGTAG---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>chr2A_1_TraesCS2A01G369700
TATCTTGTTTGTTGTTCTCACCACATTGATCCGAATGACCAAGGTGGGGGGTTCTGGTTATTGCTCTTGTGTTTTCCTAT
GTATTTCCTAATGCATGCCTACTTCCCCCTAGATGCTTTTTCCGGTTCTGCTACAATTTTTCTTCAGTAAACCGACCATC
CTCGTATTATTTTTATTTATTATTCACCATCTATGTGGTGCATTTCATACTTTTGGGGGTGTTAGTTGAATGCCTCTCAC
CTAAACAACCAATATTTGTTAGCTCTGCCGGTTACGGACGGAACGGATCAATCATCAATCAACCATGGT-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------CCATGGCATCCAACGCCCGACGCCCATCTTATTATAGCAA
CTCCAGTGAAAGAAAAAAAATGCCTACTTGGCTTAATCATCAGGTTGTAGCCACCGTGGCCAGACAGTATGATCGTGCTC
TTGTGCTTATAGTTAAATAGTTAATTAACAGAAAGTCTTTGCTATTTCCCCTCAAAAAAAAAAGTCTTTGCTATTGCACA
GTCGCAAAAAGAAAACCTTGAGCACGCTGCCACCCTCCTTCCATACGGGCG-GAGCACAAATAAGTAAACCCCCACGGGG
CCACCGTCCAGCGACTCCGTTTTG----------------GGAGTTCCCACGGAAGGATACAGAAATGCAGA-CGTGCAG
GTAAAACCTTCCCGTCAAATCCCATCTATACCTCTCCAGATCCACGCATGGATGAAGACGCCTTCCCGGCCTTGTCAGCA
TCCGCCCTATA------CACC----------AACCCGAGTCGTCCACACACCACATCAACGGACCCGAAGCC-AAAGAGG
CGAAAGCAAAAGCCAAGACTCGGCTTTCCTCTCGCTCGCTGCTCGCTGCTCTCTG--CTCTAGGCCGCGCGCAGGGCACA
CGCTTCTCCTCACTCCCCCGCCTCTCGTCGTGCCTCCATCGAGGCGAGCTGCTTCCAGCCGGCCAGGCAGACAGAGAGTG
AGCC-----ACCCCTGCCCGGGACCAGAGGAGAAAGAAGGCAGGC-------------------AGGGCGAGATGGCGGG
CGCGCTGGGCGTGAAGGCGACGCCCTTCACCTACGCGGCGCACGCGCTGGGCGCGGCAGCGGCGGCCATGGTGCTCGTCT
GGTGCATCCACTTCCGCGGCGGCCTCGCCCTCGAGGCCGTCAACAAGAACCTCATCTTCAACGTGAGTCGTCGCTCTGTT
TTCTTCTTCTTCTTTTCCCCTGTTGCAAACCGCCCCCGTCGGATAGGCACAGGCTTACCATCGCTTCAGTTGCAAGTCAC
ATCACCGTGGAAGCTTTAGGGACAGAGAGAATTATTCGGTATACCTCCCTTGAGGTTGTAGGG-AAATATTATTCTTCAC
CCCGGCCCCGTATCACATGAATAGCCTCGCCTCAGCTCTGGCTTCGAGCTGTTGGTTTCTTGGCTTGTGTCCGATTGATT
CACTGTGCTAAAACGTCTTACATTTAGAAACGGAGGTGGTAAACTGAACTGTTAAAACATCTTACGTTTTGGAACAGAGG
TAGTGGTATCTAGGGGAGAACCATGCTCGAAATGGGGATCGGGGGG-ACAAGCAAAAATGCTGCAATTGAGAAATTCAAC
TGCTCTTGAATCTCGATTGCCCTGCAGCTAGCTCATGTTCCTTGTCAATGAATGTTCTGGCACTTGTAGATCAGAATT--
--TAATTGGACCCAATAAAATAGCGGTGAGACTTCAAAGCG-TGATAAGATTGGACAGAGCACGTGGAAAGCCATCC---
-------------------------------------------------------------------------TTATCCT
CAGATTTATATTTCGGGTACTAGTGCAAGTTTT-------------------TGCACAGGAGCCTAATTAAATTCTCTGC
CCTCTTGCCTGTCAGTCCCGAAAGGATCACTGAAAAACCCAGACTGGGTTGATTGATGCTGTTTAAATTAGGA---TTTA
TGGCCGTAGTGTGGCATAATTTAACTTAATTGCCGTTGTTATTTCGAGACCATCAGTTCAATTGTTCATATTTTTCTTGT
GCTGTAAAATGCAGGTTCACCCCGTTCTTATGCTGATCGGCTTCATTATCCTTGGCAGTGAAGGTAAGGCTAAAGAACCG
TACAAGAATTCCCTGATCTTTTTTTGCCTCTGTCGGTGGTACTGTACAGTGTACACATCTACTAGA-ACACAGATCGGTT
TA-TTCTCTCAAATAATCCGTCCTGGCAGCTATAATGGTCTACAAGGTATTTCCGGGACTGAGCCACGACACGGCCAAGC
TGACCCACCTGATCCTCCACGCGATCGCCATCGTCCTCGGCGCCGTCGGGATCTACTGCGCCTTCAAGTTCCACAACGAG
AGCGGGATCGCTAACCTCTACAGCCTGCACTCCTGGCTCGGGATCGGAGCCATTTCTCTCTACGGAATCCAGGTAACTCG
AACCGGCCGTTGCCATGGCCTGCGCATGCAGGATTTTGCAGAGTTTTCTTCCGGCGGATCGGCTAATGTAAGGTGTGCTC
G-ATCTGCAGTGGATATTTGGGTTCGTGACGTTCTTCTTCCCCGGCGCGGCGCCGGACGTGAGGCGCGGGGCTCTGCCGT
GGCACGCGCTCTTCGGGCTCTTCGTCTACGTGCTCACGCTGGCCACGGCGGAGCTCGGGTTCCTGGAGAAGATGACGTTC
CTGCAGAGCTCCGGGCTCGACAAGTACGGCCCGGAGGCGCTCCTCGTCAACTTCACGGCCCTCGTCGTCGTGCTCTTCGG
TGCCGCCGTGGTCGTCGCTGCCGTCGCTCCCGCGGCTAAGGTGGAGGAGCCGGAGGGATATGCTCCGATCCCAGTCATCG
GGTAGGAGCATCCTAGTACTACGTGGCTACGTGCTACTAATCGTCGAAGTCGAACGTCCAGAAGCGAGACCGCGTGTGCG
ATTGGTTTCACGAGATCGGGTGTAAACACCAAGATCTATCCGTGCACACGATCCCGATCGATCGATGAACAGTAATCTGG
CTGACGCACTGTTGCACCAAACGCCAGAGTTTGATCTGTCAATAGCGATGCGTGTACCGCAGGCGGACCTACGAAACAAC
AAATATTTCAGAATACATGCTCGTTCATGATGCACACGTACATACATACGCTGCTGCTGCGTCGGTCCAACTACAAGATT
CTCTACGTATAATGCGTCCGTGTTGGCAGAATCTACAGCAACTCATCCGCCCACACACACA--GCGTGCTGGCGCCAGGA
ATAATGCGTTTCCAGGTGCCGTTGGATTGCCTCTTTCCATACAGATCATCGCTCCATTTCTAAAGTCTAAACCCCTTCCT
TGTCCAAAGACAAAGCAC-------GCAGGCACTT---TATCAAGGAAAAAGCAGTGCATGAATACGATGTAGCTAGCCC
ACACACGGAAGTGTGCAGTTTTATAAACATTTTTGCGTC---GCTTTGCTAGTCGCGATGAATGATGGAACGGCTGAGAG
GA--------AAAATCTTGAGAAGGTGCCAGAACAGGTTGGCCCAGGTGGTGCGCAGCGCAGCTGAAAACAACCCTCACT
CGCCTCCAAGACCT-------CATTAGTTAATCAAGGCCAGCAAAGCCATCAAAGCATAAGATAAGCTCACAGGGATTCG
GAGG-CATGAAGTATACTAGAGCCTAATCCGAACAGCGGTTGCTTGTGGCTGCAACGTCTGGAGCGCATCGCCTCGTTAA
TCTGAATAGAAGGAGAAAAATATACAAGGGTGAATTCCTGTATGCCACTCAAAACTTGTCCGTATCCGCATATGCCATTG
GAAATTTCCCTCTGTCAAATATGCCACCGAAAATTTGCACCGCGTACAGATATGCCACTATAGCCAGTTTGACCGT
>chr2D_262
GCC-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------CTGCCGGTTACGGACGGAACGGATCAATCATCACGGGAACTAGGCTCATGCGCGCC
CTTCCGTTCAACTCGGTCGTCTTCACTCGCATCGACATCGCATCACACGGCGGGCTCCTGCCTCCGCTCACCGCCACAGT
TTGCAGATAATTCCATTGCAGCGCTCTGCCCAGTCGCAACGACCCCATATCCTGTTGACGGGACCATCGCGGGAACTCGG
TTCAGCCCGTTACAGACGGAACGGATCAATCATCAATCAACCATGGAATCCAACGCCCGACGCCCATCTTAC---AGCAA
CTCCAGTGAA----AAAAAATGCCTACTTGGCTTAATCATCAGGTTGTAGCCATCGTGGCCAGGCAGTATGATCGTGCTC
CTGCT------------TAGTTAATTAACGGAAAGTCTTTGCTACAC---------------------------TGCACA
GTCGCAAAAGGAAAACCTTGAGCACGCTGCCACCCTCCTTCCATATGGGCCAGATCAAAAATAAATAAACCCCCACGGGG
CCACCGTCCAGCGACTCCGTTTTG----------------GGAGTT-CCACGGAAGAATACAGAAACGCAGA-CGTGCAG
GTAAAACCTTCCCGTCAAATCCCATCTG--CCTCTCCAGATCCGCGCATGGATGAAGACGCCTTCCCGGCCTTGTCAGCA
TCCGCCCTATAGCTCAGCACC----------AACCCGAGTCGTCCACACACCACATCAACAAACACGAAGCG-GAAGAGG
CGAAAGCAAAAGCCAAGACTCGGCTTTCCTCTCGCTCGCCGCTCGCTGCTCTCTGCTCTCTAGGCCGTGCGCAGGGCACA
CGCTTC-CCTCACTCCCCCGCCTTTCGTCGTACCTCGATCGAGGCGA-------------------GCTGATAGGGAGTG
AGCT-----ACCCCTACGGA-------AGAAGGAAGAAGGAAGGCACACAAGTTCGTGTGCAGCAGGGCGAGATGGCGGG
CGCGCTGGGCGTGAAGGCGACGCCGTTCACCTACGCGGCGCACGCGCTGGGCGCGGCGGCGGCGGCCATGGTGCTCGTCT
GGTGCATCCACTTCCGCGGCGGCCTCGCCTTCGAGGCGGTCAACAAGAACCTCATCTTCAACGTGAGTCGTCGCTCTGTT
TTCTTC---TTCTTTTCCCCTGTTGCAAACCGCCCCCGTCGGATAGGCATAGGCTTACGATCGCTTCGGTTGCAAGTCAC
ATCACCGTGGAAGCTTTAGGGACAGAGATAATTATTCG--ATACCTGCCTTGAGGTTGTAGAG-AAAATTAGTCACCCT-
------CCCGTGTCAGACGAATAGCCTCGCCTCTGGTCTGGCTTCGAGCTGTTGGTTTCTTGGCTTGTGTCCGATTGATT
CACTGTGCTAAAACGTCATACATTTAGGAACATAGGTAGTAAATTAAACTGATAAAACGTCTTACATTTAGAAACAGAGA
TAGTAGTATCTAGGGGTGAACCATGCT-GAAATGGGGATCGGGGGCAACAATAAAAAATGCTGCAACTGAGAAATTCAGC
TGCTCTTGAATCTCGATTGCCCTGCAGCTAGCTCATGTTCCTTGTCAATGAATGTTCTGGCACTTGTAGATCAGAAGTTA
TATAACTGGACCCCATAAAATAGGGGCGAGACTTCAAAGC-ATGATAAGATTGAACAGAGCACATGGAAAGCCATCCTGT
GTTGAATGGTTGGCTACTTGAATATTGGCCTGCTGCTCCAAGCTAGACTTGTGAGGATTTTTTTTTGTTTAAATTATCCT
CAGATTTATATTTCGCGTACTAGTGCAAGTTTTGCTGGAGCGTCTGACTTTTTGCACACGAGCCTAATTAAATTCTCTGC
CCCTTTGCCTGTCAGCCCCGATCGGATCACTGAAAAAACAG--------TGATTGATGCTGTTTTCTCATTATGTTTTTA
TGGCCTCAGCGTGACATAATTTGACTTAATTGCAGTTGTTATTTCCAGATAATCAATTATTCATAT------TTTCTTGT
GCTGTAAAATGCAGGTCCACCCTGTTCTTATGCTCATCGGCTTCATTATCCTTGGCAGTGAAGGTAAGGCTAAAGAACCG
TACAGGAATTCCCTGATCTTTTTTTGCCTCTGTTGGTGGTACTGTACAGTGTACATGTACTAG---AACACAGATCGGTT
AATTTCTCTCAAATAATCCACCCTGGCAGCCATCATGGTCTACAAGGTATTTCCGGGACTGAGCCACGACACGGCCAAGC
TGACCCACCTGATCCTCCACGCGATCGCCATCGTCCTCGGCGCCGTCGGGATCTACTGCGCCTTCAAGTTCCACAACGAG
AGCGGGATCGCCAACCTCTACAGCCTGCACTCCTGGCTCGGGATCGGAGCCATTTCTCTCTACGGAATCCAGGTAACTCA
AACCGGCCGTTGCCATGGCCTGCACATGGAGGA-TTTGCAGAGTTTTCTCCCGGCGGATCGGCTAATGTAATTGTGTGCT
CAATCTGCAGTGGATATTTGGGTTCGTGACGTTCTTCTTTCCCGGGGCGGCGCCGGACGTGAGGCGCGGGGCTCTGCCGT
GGCACGCGCTGTTCGGGCTCTTCGTCTACGTGCTCACGCTGGCGACGGCGGAGCTCGGGTTCCTGGAGAAGATGACGTTC
CTGCAGAGCTCCGGGCTCGACAAGTACGGCGCGGAGGCGCTCCTGGTCAACTTCACGGCCCTCGTCGTCGTGCTCTTCGG
CGCCGCCGTGGTCGTCGCTGCCGTCGCTCCCGCGGCTAAGGTGGAGGAGCCGGAGGGATATGCTCCGATCCCAGTCATCG
GTTAGTAGCATCCTAG---TACGTGGCTACGTGCTACTGATCGTCGAAA------GTCCAGAAGCGAGACCGCGTGTGCG
ATTGGTTCCACGAGATCGGGTGTAAGCAC---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>chr2B_490
AAAGTC--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------TGCTGTTGCACA
GTCGCAAAAAGAAAACCTTGAGCACGCTGCCACCCTCCTTCCATATGGGCCAGAGCGAAAATAAATAAACCCCCATGGTG
CCACCGTCGAGCGACTCCGTTTTGTTTGTTTGTTTACTTGGGAGTT-CCACGGAAGGATGCAAAAATTCAGATCGGGCAG
GTTAAACCTTCCCGTCAAATCCCATCC--ACCTCTCCAGATCCACGCATGGATGAAGACGCCTTCCCGGCCTTGACAGCA
TCCGCCCTATT------CAGGCTCAGCACCAAACCCGAGTCGTCCACACACCACATCAACAAAACACGAACCGAAAGAGG
CGAAAGCAAAAGCCAAGACTCGGCTTTCCTCTCG-------CTAGCTGCTCTCTG--CTCTAGGCCGTGCGCAGGGCACA
CGCTTCTCCTCACTCCCCCGTCTTTCGTCGTGCCTTGATCGAGGCCAGCTGCTTCTAGCCGGCCTGACAGATAGAGAGTG
AGCCAAGCTACCCCTGCCGGGGACCAGAGGAGGAAGAAGGAAGGC-------------------AGGGCGAGATGGCGGG
TGCGCTGGGCGTGAAGGCGACGCCGTTCACCTACGCGGCGCACGCGCTGGGCGCGGCGGCGGCGGCCATGGTGCTCGTCT
GGTGCATCCACTTCCGCGGCGGCCTCGCCCTCGAGGCGGTCAACAAGAACCTCATCTTCAACGTGAGTTGCCGCTCTGTT
TTCTTC---TTCTTTTCCCCTGTAGCAAACCGCCCCCACCGGATAGGCATAGGCTTACGATCGCTTCAGTTGCAAGTCAC
ATCACCGTGGAAGCTTTAGGAACAGAGATAATTATTCG--ATACCCACCTTGAGGTTGTAGGGAAAAATTAGTCATCCT-
------CCCGTATCACATGAATAGCCTAGCCTCAGCTCTAGCTTCGAGCTGTTGGTTTCTTGGCTTGTATCCGATTGATT
CACTGTGCTAAAACGTCTTATAG--------------------------------------------TTAGGAACAGAGG
TAGTAGTATCTAGGGGAGAACCATGCTCGAAATGGGGATCGGGGGTAACAATAAAAAATGCTGCAACTGAGAAATTCAGC
TGCTCCTGAATCTCGATTGCCCTGCAACTAGCTCATGTTCCTTGTCAATGAATGCTCTGGCACTTGTAGATCAGAAAT--
--TAATTGGACCCCATAAAATAGCAGTGAGACTTCAAAGCAATGATAAGATTGGACAGAGCACATGGAAAGCCATCCTAT
TTTGAATGGTTGGGTACTTGAATATTGGCCTGCTGTTCCAAGCTAGACTTGTCAGGATTTTTTTG---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------TTTAACTTAATTGC-GTTGTTATTCCCAGATAATCAATTATTCATAC------TTTCTTGT
GCTCTAAAATGCAGGTCCACCCTGTTCTTATGCTCATCGGCTTCATTATCCTTGGCAGTGAAGGTAAGGCTAAAGAACCG
TACAAGAATTCCCTGATCTTTTTTTGCCTCTGTTGGTGGTACTGTACAGTGTACACATGTACTAGAAACACAGATCGGTT
AATTTCTCTCAAACAATCCACCCTGGCAGCCATAATGGTCTACAAGGTATTTCCGGGCCTGAGCCACGACACGGCCAAGC
TGACCCACCTGATCCTCCACGCGATCGCCATCGTCCTCGGCGCCGTCGGGATCTACTGCGCCTTCAAGTTCCACAACGAG
AGCGGGATCGCCAACCTCTACAGCCTGCACTCCTGGCTCGGGATCGGAGCCATTTCTCTCTACGGAATCCAGGTAACTCA
AACCGACGCCATGGCGTCTAC--------AGCA-TTTGCAGAGTATTCTTCCTGCGAGTCGGCTAATGTGTACTCC----
--ATCTGCAGTGGATATTTGGGTTCGTGACGTTCTTCTTCCCCGGGGCGGCGCCGGACGTGAGGCGCGGGGCTCTGCCGT
GGCACGCGTTGTTCGGGCTCTTCGTCTACGTGCTCACGCTGGCAACGGCGGAGCTCGGGTTCCTGGAGAAGATGACGTTC
CTGCAGAGCTCCGGGCTCGACAAGTACGGCCCGGAGGCGCTCCTTGTCAACTTCACGGCCCTCGTCGTCGTGCTCTTCGG
CGCCGCCGTGGTCGTCGCTGCCGTCGCTCCTGCGGCTAAGGTGGACGAACCGGAGGGATATGCTCCGATCCCTGTCATCG
GTTAGTAGCATCCTAG---TAGGTGGCTACGTGCTACTGATCGTCGAAC------GTCCAGATAACACACCGCGTGTGCG
ATTGGTTCCACGAGATCGGGTGTAAGCAC---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>chr2D_2845
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------AACACCAAGATGTATCCGTGCACATGTTCCCGATCAGG---TGAACAGTCGTCTGA
TTGACGCACTGTTGCACCAAACATGAGAGTTTGATCTGTCAATAGCTATGCGTGTACTACAGGTCCACCT-----ACAAC
AAATATTTCAGAATTCATTCTTCTTCATACGTTCATGCA--------------CTGCTGCATCGATCCAACTACAAGATT
CT-------------GTCCGTGTTGGCAGAATCTACAGCAACTCATCCGCA----CACACACAGCGTGCTGGCGCCGGGA
ATAATGCGTTTCCAGGTGTCACTGGATTGCCTCCTTC----CAGATCATCGTTCCATTTCTAAAGTCCAAACCCCC----
TGTCCAAAGACAAAGAAC-------GCAGACATCTTTATCAAG-GGAAAAAACAGTGCATGAATACGATGTAGCTAGCCC
ACACACGGAATTATGCAGTTTTATAAACATTTTTGCGTC---GCTTTGCTAGCCGTGATGAATGATGGAACGGCTGAGAG
GA--------AAAATCTTGAGAAGGTGCCATGACAGGTTGGCCCAGGTGGTGCGCAGCGCAGCTGAAAACAACCCTCACT
CGCCTCCAAAACTCCATTAGAGATTAGTTAATTAAGGCCAACAAAGCCAC--AAGCATAAGATAAGCTCACAGGGATTCG
GGGGGCATGAACTATACTAGAGCCTAATCCAAACAGGGGTTGCTTGTGGCTGCAACGTCTG-------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>chr2B_2979
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------AC
AAATATTTCAGAATACATGCTCGTTCATGATGCA--------TACATACACTGTTGC-------ATCCAACTACAAGATT
CTGTACGTA--ATGCGTCCGTGTTGGCAGAATCTACAGCAACTCATCCGCC----CACACA--GCGTGCTGGCGCCAGGA
ATAATGCGTTTCCAGGTGTCGTTGGATTGCCTCCATA----CAGATCATCGTTCCATTTCTAAAGTCTAAACCCCT----
TGTCCAGAGACAAAGTATGCTGTATGCAGACATCTTTATATCAAGGAAAAAGCAATACATGAATACGATGTAGCTAGCCC
ACACACGGAAGTGTGCATTTTTATAAACATTTGCTTCGCTTTGCTTTGCTTGTCGCGATGAATGATGGAACGGCTGAGAG
GACGAGAGGAAAAATCTTCAGAAGGTGCCAGGACAGGTTGGCCCAGGTGGT-----GCGCAGCTGAAAACAACCCTCACT
CGCCTCCAAAACTT-------GATTTGTTAATTAT-GCCAGCAAAGCCGT----GCATAAGATAAGCTCACAGGGATTCG
GGGG-CACGAACCATAGTAGAGCCTAATCCAAACAGGGGTTGCTTGTGGCTGCAACGTCTGAAGCGTATC----------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>SNPs
S-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSS---------------------------------SSSS-S-SS--S-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------S------------------------SSSS-----
----------SSSS---------------------------------------S---------S----------------
S--SSSSSSSSSSSSSS------------S--------------SSSSSSSSSSSSSSSSSSSSSSSS----S-------
---------------------------------------------S----S------S------S---------------
----------------------------------------------S---------------------------------
---------------------------SS---------------------------------------------------
------------------------------------------------------------SS------------------
---------------------------------------S---------------------------S------------
-----------------------S------------S------------------S--------S------S--------
------------------S-------------S-------S---------------------------------------
------------------------S--------------------------------S----------------------
-------------------------------------S------------------------------------------
------SSS----------------------------------------S--------S---------------------
----------------------------S---------SS------S--------------------SS-SS-SS-S-SS
SSSSSS--------------------------------------------------------------------------
---------------------------S---SS----S-----S-S-----S------S------S---S----------
----S----------------------------------------S-----SS-------------S-----------S-
----------------------------------------------------------------------------S---
-------------S--------------------------S----------------------S----------------
--------------------------------------------------------------------------------
---------------S------------------------------------------S---------------------
--SS-----------S-----SS--------------S-SSSSSSSSSS---------------SSSSSSSSS-------
-----SS--S---S-------------------S-----------S---SS----S--SSSSSSS-SSSSSS--------
----------------S-----S-----------S---------------------------------------------
---------------------------------S------------------------S---------------------
S------------------SS---------S-------------------------------------------------
--------------------------------------------------------------------------------
-----------S-------------------------------------------------------------------S
-----------------------S----S----S-------------------------------------SS-SSSSSS
S--------------------------------------------S----------------------------------
----------S--------------------------------S------------------------------------
--------------------------------------------S-----------------------------------
S-------------------------------------------------------------------------------
-S---S----------SSS-------------------S---------SSSSSSS-------------------------
-------S---------------------------S------------S-S--------SSSSSS--------SS----S
S---------------------SSS---------------------S----------SS----SSS----SSSSS-----
----------------------------------SSSSSSSS-------S----------S---S---------------
--S------SS----------------------------------------SSSS-------------------------
------------------S--------------S---SSSS----------S------------------------SSSS
---------------S-------------S--SS----------------------------------------------
--------------------------------------------------------------------------------
-------------------------------S------------------------------------------------
---------S--S--------S----------S-----------------SS----------------------------
-S---------S------------------S-----S------------------------S----S---SSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_554
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------GCCCGACGCCCATCTTATTA------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>reverse_1589
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------ATTATTCTTCAC
CCCGGCCC------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>forward_766
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------CTGCCACCCTCCTTCCATAC----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>reverse_2795
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------GTGCTC
GATCTGCAGTGGAT------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>forward_1499
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------CGGATAGGCACAGGCTTACC---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>reverse_2891
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------CTTCGGGCTCTTCGTCTACG--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>forward_2183
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---CTTGCCTGTCAGTCCCGAAA---------------------------------------------------------
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----------------------------------------------------------------------------
>reverse_4120
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---------------------------------------CCGCGTACAGATATGCCACT-----------------
