>input_sequence_44151
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--------------ATGCTGGGCCTGCTCGCGCACCTCCACGCGGCGCTCGTGTTCCTCCCCAACAACGGCGGCCCGGCC
TGGGCCGGGCCAGGCGGCGGCGCGGGGGCGGTGTATGACGTGACGCGCTACGGCGCCCGGCCGGACGGCATGACGGACGC
GACGCTGCCGTTCCTGCGCGCGTGGGCCGACGCGTGCCGCTCGCCGCGCCCGGCCACGGTGCTGGTGCCGCCGGGCATGT
TCCTGGTGGGGAGCGCCACGTTCATGGGCCCGTGCGCCACCCGCGCCGTCACGTTCAACGTGGCCGGCACGCTGCTCGCC
CCCTCGGGCTACGGCTGGGACAGCGCCTCCCCCGGGCGGTGGCTCACGTTCGAGTCCGTGGAGGGCCTCGCCGTCTCCGG
CGGCACCCTCGACGGCCGCGGCGCCCCCCTCTGGGCCTGCAAGCAGCAGCAGCCGCAGCAGCCGCGCCTCCACTGCCCGT
CCGGCGCATCGGTACGTGCCTCCCATATATGTCTCGCAGAGCCAGACGATTTCTAGCTAGGTGA---TCTTGACGTGCCA
TT-----TGCGTGGGCGTGCAGTCGCTGACGATCTCGAACTCGAGGGACGTGGTGGTGGACGGGCTGAGGTCGATGAACA
GCGAGCTGTTCCACGTGGTGGTGCTGCAGAGCAACGGCGTGACGCTGAACCGGGTCACGGTGGACGCGCCGGAGGACAGC
CCCAACACCGACGGGATACACATCCACATGTCCAGCCACGTCTCCGTGTACGACGCCAACATCCGCACCGGCGACGACTG
CGTTTCCGTCGGCCCGGGCAACTCCAACCTCTGGATCGAGCGCGTCGCCTGCGGCCCAGGCCACGGCATAAGGTACATCT
------------TGTGA----TGGGTCGGAGTTTGCAAGACTAGAGGACCTGAGCTAACCCATTGACATCTTCTTGATTG
TG-T---TAACTTAGCATCGGGAGTTTGGGCCACCAGCAAGGGCTGGACATGGAGGACGTGCAGAACGTGACGGTGAAGA
CGACGTGGTTCACCGGCACCTCAAACGGGCTGAGGATCAAAACCTGGGGGAGCTCCAAGCAGGGTTTCGTGAGGGGTGTC
ACCTTCGAGGACGCTACTATGACAGGCGTCCACAACCCCATCATCATCGATCAAAATTACTGTCCCCAAAAAGTTGGGTG
CAGCGACCGGGTAATGTTCTAAACAAGT-----TACTCCACACGGCACATATTCATGCATGTATACAACAATAGCC--TT
TTT--ATCTGTATGCTCTAGTAATAATTTTGGATGTGACATTGGCGGGGGGAGGCCCCTGACCCAACCGTGAAGAACATC
ATGGCAACATGGAAATTTGACAAAAAAACGATGAAAAAGGCTCAAGATTCGAACTGCTGAACCTGATTCAAGAAAACACT
GCCATGGCAGCAAAAACGTTTATATATTATTATACTACTTTGTATTCGTGTTTTTTCAATATGTTAATTAATTTGGCTGC
TGTTGTTAGTAGTAGATTTTTTTCTCGGCTGCCAGCATTGATTTGGTGCTTCTTGTTTACAGAGTTCGAGTATCAAGATC
AGCGAGGTGAAGTACGTGGACATACGGGGGTGGTCGACGACGCCGGTGGCCGTGACCTTCAACTGCAGCAGGAGCCACCC
GTGCAGCGGGATCAGCATGCAGGACGTGAAGTTGATGTACGACAGGCGCGTCGCCAAATCCTCATGCCGGAACGTTCAGG
GGAGGTCGGTTGGTCTCGTCCTGCCGCCAAGCTGCCTCTAA---------------------------------------
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>chr3D_1_TraesCS3D01G396300
CTAGTTTCTGCGTACCTGCGTTTCACCGGCTGTTAATCCTGCTAGATGACTAGTCCATTTGTCCCGCTCCACTCAAGCAG
TTAGTTAAGGACCATCCTTGGGTCATGG--------CCGC-TTCTGGTAGTCAAAAGATTGATTGATCTATCTACAAGTC
GTTTTTT------GCAGCATAACAGTAGAGGACGACGTAAACTGCAGTTAACGAGACGCTGAAACATAAGCTGC------
---ATGGTGATCTTGATTTCCAAATGCAGGCATGCAGCCATGGAAGTTGCTAAATGGCCAACCCAACTAGCAACAACTAG
ACGGTACACATGTGTGCGGATCTAGAAGCGCTGCGCCTTTAGTTTGTTGATCAGGTCGCGGGATCCTCAAACTGGGATCT
CAAGTTTCGAACTCGGTAACGAAAGCCTTTTGAACTGGTTTAACTT-TTTTTGACAAAGTTGTACTAAGCGCAGGTCAAT
TAATATGAATTGGAGGGATTACCAACATAA--------------------------------------------------
----------------------------------AATGAAGTATCAAAAGGATACAAATATAATAAGCGTACAACCGGCC
TGACAAGAGTAAACAATCGTTCTTGAAACATAC---AGTAAACAACGTGTTTGCTCCTCAAAACCATCAACGATTAACAG
AAGAAGCTAGCACACGCATGAAATTTGCATGGGCCGCAATGGCATGATTCCAAGAACTCGCCAAACGCATGCATTTTAGA
AAGTGTTATCATACGCACATGGGACTTTCATAGTCTCCCATGTCAAAGATCACTAACTACCAGCTGGTCTCCCATGGTAG
GTAAGT----------ACTGTACCCAACCCTACTTGATCACCATGTCCTAAAGCACTAAATAAGGCCCTAAT----TAAA
TTACTGATTCACCAGCTTGATTCACTTTCCATAG-AAAACCAGCCAAATTCGGCCACTATAAGTACACGTGTCCACGTTA
GTAATAACATTCCTCCTACGACACCG---ACGTACGTACCTAACAAGCACCTGCAAGCTCGCGACACAGGCAGCAGCTCG
AT----CGGTCACCATGCTGGGCCTGCTCGCGCACCTCCACGCGGCGCTCGTGTTCCTCCCCAACAACGGCGGCCCGGCC
TGGGCCGGGCCAGGCGGCGGCGCGGGGGCGGTGTATGACGTGACGCGCTACGGCGCCCGGCCGGACGGCATGACGGACGC
GACGCTGCCGTTCCTGCGCGCGTGGGCCGACGCGTGCCGCTCGCCGCGCCCGGCCACGGTGCTGGTGCCGCCGGGCATGT
TCCTGGTGGGGAGCGCCACGTTCATGGGCCCGTGCGCCACCCGCGCCGTCACGTTCAACGTGGCCGGCACGCTGCTCGCC
CCCTCGGGCTACGGCTGGGACAGCGCCTCCCCCGGGCGGTGGCTCACGTTCGAGTCCGTGGAGGGCCTCGCCGTCTCCGG
CGGCACCCTCGACGGCCGCGGCGCCCCCCTCTGGGCCTGCAAGCAGCAGCAGCCGCAGCAGCCGCGCCTCCACTGCCCGT
CCGGCGCATCGGTACGTGCCTCCCATATATGTCTCGCAGAGCCAGACGATTTCTAGCTAGGTGA---TCTTGACGTGCCA
TT-----TGCGTGGGCGTGCAGTCGCTGACGATCTCGAACTCGAGGGACGTGGTGGTGGACGGGCTGAGGTCGATGAACA
GCGAGCTGTTCCACGTGGTGGTGCTGCAGAGCAACGGCGTGACGCTGAACCGGGTCACGGTGGACGCGCCGGAGGACAGC
CCCAACACCGACGGGATACACATCCACATGTCCAGCCACGTCTCCGTGTACGACGCCAACATCCGCACCGGCGACGACTG
CGTTTCCGTCGGCCCGGGCAACTCCAACCTCTGGATCGAGCGCGTCGCCTGCGGCCCAGGCCACGGCATAAGGTACATCT
------------TGTGA----TGGGTCGGAGTTTGCAAGACTAGAGGACCTGAGCTAACCCATTGACATCTTCTTGATTG
TG-T---TAACTTAGCATCGGGAGTTTGGGCCACCAGCAAGGGCTGGACATGGAGGACGTGCAGAACGTGACGGTGAAGA
CGACGTGGTTCACCGGCACCTCAAACGGGCTGAGGATCAAAACCTGGGGGAGCTCCAAGCAGGGTTTCGTGAGGGGTGTC
ACCTTCGAGGACGCTACTATGACAGGCGTCCACAACCCCATCATCATCGATCAAAATTACTGTCCCCAAAAAGTTGGGTG
CAGCGACCGGGTAATGTTCTAAACAAGT-----TACTCCACACGGCACATATTCATGCATGTATACAACAATAGCC--TT
TTT--ATCTGTATGCTCTAGTAATAATTTTGGATGTGACATTGGCGGGGGGAGGCCCCTGACCCAACCGTGAAGAACATC
ATGGCAACATGGAAATTTGACAAAAAAACGATGAAAAAGGCTCAAGATTCGAACTGCTGAACCTGATTCAAGAAAACACT
GCCATGGCAGCAAAAACGTTTATATATTATTATACTACTTTGTATTCGTGTTTTTTCAATATGTTAATTAATTTGGCTGC
TGTTGTTAGTAGTAGATTTTTTTCTCGGCTGCCAGCATTGATTTGGTGCTTCTTGTTTACAGAGTTCGAGTATCAAGATC
AGCGAGGTGAAGTACGTGGACATACGGGGGTGGTCGACGACGCCGGTGGCCGTGACCTTCAACTGCAGCAGGAGCCACCC
GTGCAGCGGGATCAGCATGCAGGACGTGAAGTTGATGTACGACAGGCGCGTCGCCAAATCCTCATGCCGGAACGTTCAGG
GGAGGTCGGTTGGTCTCGTCCTGCCGCCAAGCTGCCTCTAACAATATGGACGAC-GACTACACTCATGACGACGAGATGC
--CACACGTGTAACATAATTGGCGCGAAATCTAG----------------------------------------------
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-------------------TTTATTTTTGCTATGAAAGCAATTCCTTCCCGACTTCATCAACGGAGGCAAGCATTTACAA
CAGGCCCAAAAGATCTGTAAAAGGAAAATGTGTCCTCTCTACATCAGAGGATGAATTAGGAATACCATCATGTATTTGGT
GCCCATCCATTTGTGCGATAATCCACCTTGTAGCTACCTCCCCTAATCTTCTACTCCCTCCATCCCGTAATATAAGAGCG
TTTTTGACACACTCTTATATTATGGGACAGAGGGATTATATCATTGTTGGAGAACCTTTCATCCGCTTTAGTTCTGCAAC
TTCAACCAAATATCCATCATGTAGCAAAAATTGATGGACAAAATCAGTAGGTCATTTGGGAATTTTCCGTGAAAGCAAGC
ATTGTTTCTTGCTTTCCAGATTGCCCAAATAGTGGCTTATAAACCCACGGGCACCATCTTCTTTTGATCCAAAGGGAAGT
CAGTTATCACATAAATGTGATAAAAATGGTATGTACACATTGGAAATTCATTTCGCATTGAAGAACACTTTGTACAAATG
TGCAACAAGACACGGGGAAAGGAAGAATTGACCAGCCTCACGAAAAGGTGTTTCTTTCTC--------------------
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--------------------CTAACATGTCCTCCGAGTAAAATATATCTAGTCAAAATGCTTGTATGAAGCACAAACCAA
CATAAAATCTTAATTTGGGATGTAACTTGGACTTTTGTAACCAAGTTTTAGGATATATGCCAAATGGAATTTAGTTGCAA
GCTAAAATATTTTATAAAGTGTTTACCCTTAGTTCATGGGTTCATACCACT-----------------------------
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-----------------------------------------------------------------GTATCATTATCATTG
GAAACACAACACCATCCAGTAACCTTTCCATTGCTACCCACATTTCTATATATTGTCCCCTGATATTATTTCTTCTAAAA
CTTAAACATGGCAAACCCAAACCTTGGTCATCATAGTATAGAT
>chr3B_1
CTAGTTTCTACGTACCTGCGTTTCACCGGCTGTTAATACTGCTAGATGACTAGTCCATTTGTCCCGCTCCACTCAAGCAA
TTAGTTAAGGACCTTCCTTAGGTCATGGGCTCATGGCCGCTTTCTGGTGGTCAAAAGATTGTTTGATCT-TCTACAAGTC
GTTTTTTTTTTTTGCAGCATAACCATAGAAGACGACGTAAACTGTAGTTAACGAGACGCTGAAA---------C------
---ATGGTGATCTTGATTTCCAAATGCAGCCATA--------GAAGTTGCTAAGCGGCCAACCCAACTAGCAACAACTAG
ACGGTACAAATGTGTGCGGATCTAGAAGCGCTGCGCCTTTGGATTGTTGATCAGGTCGCGGGATCCTCAAACTAGGAGCT
CAAGTTTCGAACTCGGTCGCAAAAGCCTTTTGAACTGTTT----TT-TTTTTGACAAAGTTGTACTAAGCTCAGGTCAAT
TAATATGGATTGAAGGAAGTACCAACATAA--------------------------------------------------
----------------------------------AATGAAGCATCAAAAGGATACAAATATAATGAGCGTACAACCGGCC
TCACAAGAGTAAACAATTGTTCTTGAAACATAC---AGTAAACAACGTGTTTTCTCCGCAAAACCATCAACGATTAACAG
AAGAAGCTAGCACACGCATGAAATTTACATGTGCCGCAATGGCATGATTCCAAGAACTCACCAAACGCATGCGTTTTAGA
AAGTGTTATCATACACACATGGGAATTTCATAGTCTCCCATGTCAAAGATCACTAACTACCAGCTGGTCTCCAATGGTAG
GTAGGT----------ACA----------CTGCTTGATCACCATGTGGTATGGTAGTAATTAATTAATTAAGGCTCTAAA
TTACTGATTCACCCGCTTGATTCACTTTCCATAAAAAAA-CAGCCAAATTCGGCCACTATAAGTACACGTGTCCACGTTA
GTAATAACATTCCTCCTACAACACCG---ACGTACGTACCTAACAAGCACCTGCAAGCTCGCGACGCAGACAGCAGCTCG
AC----CGGTCACCATGCTGGGCCTGCTCGCGCACCTCCACGCGGCGCTCCTGTTCCTCCCCAACAACGGCGGCCCGGCC
TGGGCCGGGCCAGGCGGCGGCGTTGGGGCGGTGTACGACGTGATGCGCTACGGCGCCCGCCCGGACGGCATGACGGACGC
GACGCTGCCGTTCCTGCGCGCGTGGGCCGACGCGTGCCGCTCGCCGCGCCCGGCCACGGTGCTGGTGCCCCCGGGCATGT
TCCTGGTGGGGAGCGCCACGTTCATGGGCCCGTGCGCCACCCGCGCCGTCACGTTCAACGTGGCCGGCACGCTGCTCGCC
CCCTCGGGCTACGGCTGGGACAGCGCCTCCCCCGGGCGGTGGCTCACGTTCGAGTCCGTGGAGGGCCTCGCCGTCTCCGG
CGGCACCCTCGACGGCCGCGGCGCCCCCCTCTGGGCCTGCAAGCAGCAGCAGCCGCAGCAGCCGCGCCTCCACTGCCCGT
CCGGCGCCTCGGTACGTATAAGT-ATACACGTCTCACAGAAGTCGACGATTTCTAGGTGATCTTGAGTCTTGACGTGGCA
TTCGT-----------GTGCAGTCGCTGACGATCTCGAACTCGAGGGACGTGGTGGTAGACGGGCTGAGGTCCATGAACA
GCGAGCTGTTCCACGTGGTGGTGCTGCAGAGCAACGGCGTGACGCTGAACCGGGTCACGGTGGATGCGCCGGAGGACAGC
CCCAACACCGACGGGATACACATCCACATGTCCAGCCACGTCTCCGTGTACGACGCCAACATCCGCACCGGCGACGACTG
CGTTTCCGTCGGCCCGGGCAACTCCAACCTCTGGATCGAGCGTGTCGCCTGCGGCCCAGGCCACGGCATAAGGTACATGA
CAAGTTTATCGGTGTGA----TGGGTCGGAGTTTGCAAGATTAGAGGACCTGAGCTAACCCAACGACATCTTTTTTTACT
GTGTTAATAACTTAGCATCGGAAGCTTGGGGCATCAGCAAGGGCTGGACATGGAGGACGTGCAGAACGTGACGGTGAAGA
CGACGTGGTTCACCGGCACCTCAAACGGGCTGAGAATCAAAACCTGGGGGAGCTCCAAGCAGGGTTTCGTGAGGGGTGTC
ACCTTCGAGGACGCTACTATGACCGGCGTCCACAACCCCATCATCATCGATCAAAATTACTGTCCCGCAAAAGTTGGGTG
CAGCGACCGGGTAATGTTCTAAACATGTAGGAGTACTCCGCATGGCATGTAC---------TATACAACAATAGCTATTT
TTT--ATCTGTATGAAATAGTAATAATTTTGAATGTGATATGGAC-GGGGGAGGCCCTTGACCCAACCGTGCAGAACACC
ATGGCGATATGGAAATTTGACAAAAGAACGATGAAAAACGCTCAAGATTCGAACTGCTGAACCTGATTCGAGAAAACGCT
GCCATGGCAGCAAAAACGTTTATACTTTATTATACTTC---GTATTCATGTTTTCTC-ATATGTTAATTAATCTGGCTGC
TGCTGTTAGTAGTAGTTTTTTTTTTTGGCTGCCAACATTGATTTGGTGTTTCTTGTTTACAGAGTTCGAGTATCAAGATC
AGCGAGGTGAAGTACGTGGACATACGGGGGTGGTCGACGACGCCGGTGGCCGTGACCTTCAACTGCAGCAGGAGCCACCC
GTGCAGCGGGATCAGCATGCAGGACGTGAAGTTGATGTACGACAGGCGCGTCGCCAAATCCTCCTGCCGGAACGTTCAGG
GGAGATCGGTTGGTCTCGTCCTGCCCCCAAGCTGCCTCTGACAGTATTCACAATAGACTACACTCATGG---CGAGATGC
--CACACGTGTAACATAATTGGCACGGAATGTA-----------------------------------------------
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>chr3A_85
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----TTAAGGACCTTCCTTAGGTCATGG--------CCGCTTTCTGGTGGTCAAAAGATTGATTCATCTATCTACAAGTC
GTT-TTT------GCAGCGTAACAGTAGAAGACGACGTGAACTGTAGTTAACGAGACGCTGAAA---------CATAAGC
TGCATGGTGATCTTGATTTCCAAATGCAGCCATA--------GAAGTTGCTAAGTGGCCAACCCAACTAGCAGCAACTAG
ACGGTACAAATGTGTGCGGATCTAGAAGCGCTGCGCCTTTAGTTTGTTGATCAGGTCGCGGGATTCTCCAACTGGGAGCT
CAAGTTTTGAACTCGGTCGCAAAAGCCTTTTGAACTGTTT----TTCTTTTTGACAAAGTTGTACTAAGTGAAGGTCAAT
TAATATAAATTGAAGGAAGTACCAACATACTCCTTCCGTTTCAAAATAAATGACTTAACTTTGTACTAATTTTAATATAA
AGTTGAGTCATCTATTTTAAAACGAAGGGAGTATAATGAAACATCAAAAGAATACAAACATAATAAGCATACAACCGGCC
TCACGAGAGTAAACAATTGTTCTTGAAACATGTAAGAGTAAACAATGCGTTTGCTCCACAAAACCATCAACGATCAACAA
AAGCAGCTAGCACACACATGAAATTTGCATGGGCCGCAATGGCATGATTCCAAGAACTCACCAAACGCATGCACTTTAGA
AAGTGTTATCATACGCACATGGGACTTTCATAGTCTCTCATGTCAAAGATCACTAACTACCAGCTGGTCTCCCATGGTAG
GTAAGTACCGTACCCAACC----------CTGCTCGATCACCATGTCCTAAAGCACTAAATAAGGCTCTAAT----TAAA
TTACTGATTCACCAGCTTGATTCACTTTCCATAAAAAAACCGGCCAAATTCGGCCACTATAAGTACACGTGTCCACCTCA
GTAATAACATTCCTCCTGCAACACCGTCGACGTACGTACCTACCAAGCACCTGCAAGCTCGCGACGCAGACAGCAGCTCG
GTCGCGCGGTCACCATGCTGGGCCTGCTCGCGCACCTCCACGCGGCGCTCGTGTTCCTCCCCAACAACGGGGGCCCGGCC
TGGGCCGGGCCAGGCGGCGGCGCGGGGGCGGTGTACGACGTGGTGCGCTACGGCGCCCGCCCCGACGGCATGACGGACGC
GACGCTGCCGTTCCTGCGCGCGTGGGCCGACGCGTGCCGCTCGCCGCGCCCGGCCACGGTGCTGGTGCCGCCGGGTGTGT
TCCTGGTGGGGAGCGCCACGTTCATGGGCCCGTGCGCCACCCGCGCCGTCACGTTCGCCGTGGCCGGCACGCTGCTCGCC
CCCTCGGGCTACGGCTGGGACAGCGCCTCCCCGGGGCGGTGGCTCACGTTCGAGTCCGTGGAGGGCCTCGCCGTCTCCGG
CGGCACCCTCGACGGCCGCGGCGCCCCCCTCTGGGCCTGCAAGCAGCA---------GCAGCCGCGCCTCCACTGCCCGT
CCGGCGCCTCGGTACGTGCCTCGCATATATGTCTCGCAGAGCTCGACGATTTCTAGCTAGGTGA---TCTTGACGATGCC
ATTTGCGTGCGTGGGCGTGCAGTCGCTGACGATCTCGAACTCGAGGGACGTGGTGGTGGACGGGCTGAGGTCGATGAACA
GCGAGCTGTTCCACGTGGTGGTGCTGCAGAGCAACGGCGTGACGCTGAACCGGGTGACGGTGGACGCGCCGGAGGACAGC
CCCAACACCGACGGGATACACATCCACATGTCCAGCCACGTCTCCGTCTACGACGCCAACATCCGCACCGGCGACGACTG
CGTCTCCGTCGGGCCCGGCAACTCCAACCTCTGGATCGAGCGCGTCTCCTGCGGCCCAGGCCACGGCATAAGGTGCACAA
CAAGTTTATCGCTGTGATTTTTGGGTCGGAGTTTGCAAGATTAGAGGACCTGAGCTAACCCAACGACATCATGTTGATTG
TGTT---TAACTTAGCATCGGGAGTTTGGGGCATCAGCAAGGGCTGGACATGGAGGACGTGCAGAACGTGACGGTGAAGA
CGACGTGGTTCACCGGCACCTCAAACGGGCTGAGGATCAAAACCTGGGGGAGCTCCAAGCAGGGTTTCGTGAGGGGCGTC
ACCTTCGAGGACGCTACGATGACCGGCGTCCACAACCCCATCATCATCGACCAGAATTACTGCCCCCAAAAAGTTGGGTG
CAGCGACCGGGTAATGTTCCAAACAAGTAGGAGTACTCCATATGCCACATATTCATGCATGTATACACCATTAGCT--TT
TTTCAATCTGTATGAAATGGTAATAATTTTGAATGTGACATGGAC-GGCTT-----------------------------
------------AAATTTGACAAAA-AACGATGAGAAACGCTCAAGATCCGAGCTGCTGAACCTGATTCGAGAAAACGCT
GCCATGGCAGCAAAAACGTTTATATATTATTATACTTC---GTATTCACGTTTTCTCCATATGTTAATTAATTGGGCTGT
TGTTAGTGCTAGTACTA----------------AATATTGATTTGGTGTTTCTTGTTTACAGAGCTCGAGCATCAAGATC
AGCGAGGTGAAGTACGTGGACATACGGGGGTGGTCGACGACGCCGGTGGCCGTGACCTTCAACTGCAGCAGGAGCCACCC
GTGCAGCGGGATCAGCATGCAGGACGTGAAGCTGATGTACGACAGGCGGGTCGCCAAGTCCTCCTGCCGGAACGTTCAGG
GGAGGTCGGTGGGTCTCGTCCTGCCGCCAAGCTGCCTCTGACAACATTGACGAC-GGCTACACTCATGACGACGAGATGC
CACACACGTGTAACATAACTGGCGCGGAATGTAATCGTAGTATAGTGGATAGTGACGTGGTGTGATAATTTACGATTATA
TTTATACTGTAATTTGGTGCATAATGTTTTTTAGAAACGTTTCAATTTGTGGGATTTTTATATGTGGAGCTCAGAAGTTC
CGAATCATTTGAAATCTAATTTATTTTTGCTAGGAAAACAATCCCTTCCCGATTTCATCGACGGAGGCAAGTATTTGCAA
CAGGCCCAAAAGATCTGTAAAAGCAAAATGTGTCCTCTCTACATCAGAGGATGAATTAGGAATACCATCATGTAGTTGGT
GCCCATCCATTTGTGCGATAATCCACCTTGTAGCTACCTCCCCTAATCTTCTG---------------------------
--------------------------------------TATCATTGTTGGGGAACCTTTCGTCTGCTTTCTTTCTGCAAA
TTCGACCAAATGTCCATCATGTAGCAAGT-TTGATGGGCAATATCAGTAGGTCATTTGGGAAATTTCCGCCAAAGCAAGC
ATTGTTTCTTGCTTTTTAGATTGCCCAAATAGTGGCTTATAAACCCACGGGCACCATCTTCCTTTGATCCAAAGGGAAGT
CAGTTATCACATAAATGTGATAAAAATGGAATGTACACATTGGAAATTCATTTCACATTGAAGAACACTTTGCACAAATG
TGCAACAAGACATGGGGAAAAGAAGAATTGGCCAGCCTCACAAAAAGGTGTTTCTTACCCCTAACTGTTGGGGAACGTAG
TAATTTCAAAATTTTCCTACGCACACGCAAGATCATGGTGATGCATAGCAACGAGAGGGGAGAGTGTGATCTACGTACCC
TTGTAGATCAACAACGGAAGCGTTTGGTTGATGTAGTCGTACGTCTCCACGGCCCGACCGATCAAGCACCGAAACTACGG
CACCTCCGAGTTCTAGCACACGTTCAGCTCGATGACGATCACCGGACTCCGATCCAGCAAAGTGTCGGGGAAGAGTTCCG
TCAGCACGATGGCGTGGTGACGATCTTGATGCACTACCGTCGCAGGGCTTCGCCTAAGCACCGCTACAATATTATCGAGG
ACTATGGTGGAAGGGGGCACCGCACACGGCTAAGAATATGATCACATGGATCAACTTGTGTCCATGGGGTGCCCCTTGCC
TCAGTATATAAAGGATGAAGGAGGAGGGGGCCGGCCAAGGCAATTGGTGCGGCCAAGATGTGGAGTCCTACTAGGACTCC
AAGTCCTAGTAGGAGTCCACCAAGAGGGGAGGAAGGGAGAAGGAAGTAGAGGAGAAGGAAAGGTGGTCGGCCCCCTTTTC
CCTAGTCCAATTCGGACCAGAGGGGAGGGGGGGGGGGGGCGCAGCAGCCCTTCGGCCCTTTCTTCTCTTCCCACTAAAGC
CCATCAAGGCCCATTGCTTCTCCCGTAACTACCCGGTACTCTGAAAAATACCCGAATCACTCGGAACCTTTCCGATATCC
GAATATAGTCGTCCAATATATCGATCTTTACGTCTCAACCATTTCGAGACTCCTCGTCATGTCCCCGATCTCATCCGGGA
CTCCGAACTCCTTCGGTACATCAAAACTCATAAACTCATAATATAACTGTCATCGAAACCTTAAGCGTGCGGACCCTACG
GGTTTGAGAACAATGTAGACATGACAAGACACGTCTTCAGTCAATAACCAATACCATAACCTGGATGCTCATGTTGGCTC
CCACATATTCTACGAAGATCTTTATCGGTCAGACCGCATAACAACATACATTGTTCCCTTTGTCATCGGTATGTTACTTG
CCCGAGATTCGATCATCGGTATCTTAATACCTAGTTCAATCTCGTTACCGGCAAGTCTCTTTACTCGTTCCGTAATACAT
CATCTCACAACTAACTCATTAGTTGCAATGCTTGCAAGGCTTATGTGATGTGCATTACCGAGAGGGCCCAGAGATACCTC
TCCAACAATCGGAGTGACAAATCCTAATCTCGAAATACGCCAACCCAACATGTACCTTTGGAGACACCTGTAGAGCTCCT
TTATAATCACCCAGTTACGTTGTGACGTTTGGTAGCACACAAAGTGTTCCTCCGGCAAACGGGAGTTGCATAATCTCATA
GTCATAGGAACATGTATAAGTCATGAAGAAAGCAATAGCAACATACTAAACGATCGGGTGCTAAGCTAATGGAATGGGTC
ATGTCAATCACATCATTCTCCTAATGATGTGATCCCTTTAATCAAATAACAACTCTTTTGTTTATGGTTAGGAAACATAA
CCATCTTCGATTAACGAGCTAGTCAAGTAGAGGCATACTAGTGACACTTTGTTTATCTATGTATTCACACAAGTATTATG
TTTCCGGTTAATACAATTCTAGCATGAATAATAAACATTTATCATGATATAAGGAAATAAATAATAACTTTATTATTGCC
TCTAGGGCATATTTCCTTCACTAACATGTCCTCCGAGTAAAATATATCTAGTCAAAATGCTTGTATGAAGCACAAACCAA
CAG-AAATCTTAATTTGGGATGTAACTTGGACTTTTGTAGCCAAGTTTTAGGATACATACCAAATGGAATTTAGTTGCAA
GCTAAAATATTTTACAAAGTGTTTACCCGTAGTTCATGGGGTCCATACCACTGTATCTGTTGGGGAACATAGCAGAAATT
CAAAATTTTCTACGCATCACCAAGATCAATCTATGGAGTCATCTAGCAACGAGGGAGGAGTGGATCTACATACCCTTGTA
GATCGCGCGCGGAAGCGTTCAAGAGAACGGGGTTGATGGAGTCGTACTCGTTGTGATCCAAATCACCGATGATCCACGTA
CGGAGCAGCGATGTCTCCTCCTTCTTGATCCAGCAAGGGGGGATGAGAGGTTGATGAAGATCCAGCAGCACGACGGCGTG
GTGGTGGAAGTAGCGGGATTTCAACAGGGCTTCGCCAAGCGCTGCGGGAGGAGGGAGATGTGTCATGGGAGGGAGAGGGA
GGCGCCAGGGCTTAGATGTTGCTGCCCTCCCTTCCCCCCACTATATATATGGCCAAGGGAGAGGGGGGGGGCGCAGCCTT
GGCCCTTCCTCCAAGGAAGGGTGCGGCCAGGGAGGTGTCCCTTCTCCCCAAGGCACCTCGGAGGTGCCTTCCCCCTTTAG
GACTCTTCCTTTCCCTCTTCTCTTGGTGCATGGGCCTCTTGGGGCTGGTGCCCTTGGCCCATATAGGCCAAGGCGCACCC
CCTACAGCCCATGTGGCCCCCCGGGGCAGGTGGCCCCACCCGGTGGACCCCCGGGACCCTTCCGGTGGTCCCGGTACAAT
ACCGGTGACCCCGAAACTTGTCCCGATGGCCGAAATAGCACTTCCTATATATAATTCTTTACCTCCGGACCATTCCGGAA
CTTCTCGTGACGTCCGGGATCTCATCCGGGACTCCGAACAACTTTCGGGTTACCGCATACTAATATCTCTATAACCCTAG
CGTCACCGAATCTTAAGTGTGTAGACCCTACGTGTTCGGGAGACATGTAGACATGACCGAGATGACTCTCCGGTCAATAA
GCAACAGCGGGATATGGATACCCATGTTGGCTCCCACATGTTCCACGATGATCTCATCGGATGAACCACGATGTCAAGGA
CTTAATCAATCCCGTATACAATTCCCTTTGTCTAGCGGTACGATACTTGCCCGAGATTCGATCGTCGGTATCCCGATACC
TTGTTCAATCTCGTTACCGGCAAGTCTCTTTACTCGTTTTGTAACACATCATCCCGTGATCAACTCCTTGATCACATTGT
GCACATTATGATGATGTCCTACCGAGTGGGCCCAGAGATACCTCTCCATTTACACGGAGTGACAAATCTCAGTCTCGATT
CATGCCAATCCAACAGATACTTTCAGAGATACCTGTAGTGTACCTTTATAGCCACCCAGTTACATTGTGATGTTTGGCAC
ACCCAAAGCACTCCTACGGTATCCGGGAGTTGCACAATCTCATGGTCTAAGGAAATGATACTTGACATTAGAAAAGCTTT
AGCATACGAACTACATGATCTTGTGCTAGGCTTAGGATTGGGTCTTGTCCATCACATCATTCTCCTAATGATGTGATCCC
GTTATCAATGACATCCAATGTCCATGGTCAGGAAATCGTAACCATCTATTGATCAACGAGCTAGTCAACTAGAGGCTTAC
TAGGGACATGGTGTTGTCTATGTATCCACACATGTATCTGAGTTTCCTATCAATACAATTCTAGCATGGATAATAAACGA
TTATCACGAACAAGGAAATATAATAATAATCAATTTATTATTGCCTCTAGGGCATATTTCCAACAGTATCATCATCATTG
GAAACACAACACCATCAAGTAACCTTTCCATTGCTACCCACATTTCTATACATTGTCCCCTGA---TATTTCTTCTAAAA
CTTAAACATGGCAAACCCAAACCTTGGTCATCATAGTATAGAT
>SNPs
---------S---------------------------S-----------------------------------------S
-------------S-----S----------------------------S-------------------------------
-----------------------------S--------------S-------------------SSSSSSSSS-------
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--SS-----------------------------------S---------------S--S---------------------
--------------S-------------S-----------S--SSSS-SSS-----------------------------
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------------------------------------------------------------------------S-------
----------------S---------------------------------S------------SSS--------------
-------------------------------------------
>forward_642
--------------------------------------------------------------------------------
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--------------------------------------------------------------ATAAGCGTACAACCGGCC
TG------------------------------------------------------------------------------
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>reverse_1608
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-------ATCGGTACGTGCCTCCCATA-----------------------------------------------------
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>forward_1244
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-------------------------GGGCGGTGTATGACGTGAC------------------------------------
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>reverse_3173
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----------------------------------------------------CTTCATCAACGGAGGCAAGC--------
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--------------------------------------------------------------------------------
-------------------------------------------
