>input_sequence_44099
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------ATGGGGAAGGCTGCGAGGTGGCTGAGGAGCATC
TTGGCCGGGAAAAAGGATGGCGGCAGGAGAGGGGGCAAGCGGGGGCAGGCACAGTGTGACTCGACGCCTTTGGCTGAGCT
GCCGGCGGCTGCCAGCCCGAGGGAGAAGAGGCGATGGAGCTTCCGGAGGCCTGCGGCGGCGGTCAAGACCGCTGCCGGGC
CGTCGCCGTTGGCCCAGGAGGCAGGCGGTCTGTCGGTTACGGTGTCGGAGCGCGAGCTTGAGCAGAGCAAGCGCGCCGTG
GCGGTGGCCATGGCGACTGCAGCGGCTGCCGATGCCGCGGTGATACGGCTGACACCCCCCGAGGCGGAGG------ACGA
CCTCAACCTGTATGCCACCCCTGTCCAGGAGGCCGCAGCCGCGAGGATCCAGGCCACCTTCAGAGGCTACCTGGTGAGCT
TGACATC--------AACAAGTTTGATAATGTGTTAC----TCCATCCATCTTCATGTGATTAGCTCAGTTAAAACACAA
TGTTAATACA-ATGTTGATACATACTGTACTCCTGATTTAGCAATGCACGTTAAATCAAATGTCGATGCAATTGAACAAA
TTCTGCAGAAACAGAAGCATTTCTTTTCTGATTTGCGCTGAGCATGTGACGTGCTGGTGCAGGCAAGGAAGGCTCTGTGC
GCACTGAGGGGTCTGGTGAAGCTGCAGGCGCTGATCAGGGGCCACCTGGTGAGGAAGCAGGCCAGAGCCACGCTCCGCCG
CATGCAGGCCCTCCTCATGGCACAGAACCGCGTGCGCGCGCAGCGCATGCGCATGCTCGAGGAGGAAGACCA------CG
CCGCCGCCCCTGTCGACCGCCGGTCGCCGCAGCACCCCAGACGCCGCCGCTCCTACGTAAGCCCGCACGCGAGCGCTAGT
ACGTAGAACCT------TGAGATCGTGCAGGCCGGCATGGTTGAATCAGGGAATGTG----TGGCTGCTGCATGCAGGAA
ATGGACAGGTCCGGCGAGGAGCATGCCAAGATCGTCGAGATGGACATGGGGGAGCCGCCGCGGCGGGGGCGGAGCAGCTG
CTCGGTCGCGGCGAGCGAACCATGGTCGAGAGAGCGCCGGCGAGCCGAGTGCTACGGCCCCGGCCACGGCCAGTGCTCGC
CAGCGCCGTCGGCGGCGTTCACCGAGATCACGACCCCGCGCGCCTACAGCGGGCACTTCGAGGACTTCGAGCCGGCGACG
GCGCGCGTCAGCGCGTACGTGCCGGCAGGTTACGCCGACGAGGGCGAGTCCGCGTCCGAGTTCTGCCCGAACTACATGGC
CAACACCCAGTCCTCGCGCGCCAAGGCCCGGTCCCAGAGCGCGCCGAAGCAGAGGCCCGACTCGCCGTCGCCGCTGGAGC
GGCAGCCGAGCCGGCGCCGCGGTGGCCCGGCGCCCCTGCCGAGAAGCGTCAAGATGCAGCGGTCGTCGTCGCACGTCGGC
GTGCC------ATCGTCGGCGGCCGCCATGTACGCACAGTACTACCCGTGGGCGGTGAAGCTGGACCGGTCCAGCGCGTC
GCTCCATGAGAGCGAGTGCGGGTCGACGAGCTCCGTCCTCACCGCCGCTACCACCGTCGGTTACAGCCGCTCCATGGTCG
GATTCGAGGTGCGCGACCATGATTGGATCACAACTTCACAACAAACACACAAATAAACAGAATTTCTTGGTTTCTTGTAT
TTCTTCATTTGATCGCTGACT----GATGAGAACTTCTTGATCTTTCTTCTCGTGTTGTTTCAGGTGCACAGGAACCAGT
ACTGA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------
>chr2D_1_TraesCS2D01G470000
CTGCATCGCTGAAGCCTGGCTCGCTGGAAACAGTCGATCCAGACGTTCCTAGCGGGCTGGCTTAGGAGAGTGCTTTAAGG
GGGTGTTTGGTTACAGGGACTTATTGGTATTGGGACTTAAAAAAGTCCCCTTAAGTCCCATCTAAACCAAACAGGAGGGA
CTTATAGGGACTTAAAGTGGGCATTTGAGACTTATAAAATAAGACTCTCAAGAAGAGTCTTGTAGGGACTTATAGTTGTA
ATATGGTCTTTTAGTCCATGTTAAGTCCCAGTAACCAAACAGGTAGGGACTTTTTAGAAACTTTGGACTTATAAGTTGGG
ACTAAAAAGTCATAAGACTTATGAACCAAGGCCTAAGATTCATGCGAGCTAAGATTCTAATGCAAGACAACCAACCAAAC
AACCCCTTTTCTTTTCGGACAGGTCTAACCAGGCCTAACGCGGGCAACCAACGCACCCTAAATTTTGGATCGTGACCCAA
GAGGAATGCTTGGACCCTGGAGGCTGCCTGCAACTGCACATCAAAGCCCGAGCGACTGTTCCAGATTCACATCACGGGGA
GCTAAGCAGCCCCAGCGCCTCGTCATCGTGATGCATGAGACAATGATCCATGATTGACATGGACCCCGGCAGGCCAGCTC
TAGCTGAT-----CTGAACTCAGCTCAGCTCTCCGAGTACAGTGCACTCACTTGCTGTGTTTGTTTAAAGGCGAAAGATT
CTGACTGACAGCCAGCCTTTGTAGGGAAGCTCTCCACGTTCCTCCCGTCCCGCCCGCACATGCGCTCGCCGACCGGGCGC
CAATGCCATTGCTCGGCGGCTCGCGTCGGTTGACTGACACGTTGTGCCACTGTTCCAAGCTCGCGCGGCGCG-CCGGGGT
GGTTGGCTGGTTGGTGATGGCGCTTCCAATGCCTAGC-AGGCTTCTTGATTTGTCGCCGGGGGCTATAATATAGTCCGGT
CCGTCGGTTCTGTTGTGGCTGAGGGCGGTTCATCGAAGGTGCTCGCAATGGGGAAGGCTGCGAGGTGGCTGAGGAGCATC
TTGGCCGGGAAAAAGGATGGCGGCAGGAGAGGGGGCAAGCGGGGGCAGGCACAGTGTGACTCGACGCCTTTGGCTGAGCT
GCCGGCGGCTGCCAGCCCGAGGGAGAAGAGGCGATGGAGCTTCCGGAGGCCTGCGGCGGCGGTCAAGACCGCTGCCGGGC
CGTCGCCGTTGGCCCAGGAGGCAGGCGGTCTGTCGGTTACGGTGTCGGAGCGCGAGCTTGAGCAGAGCAAGCGCGCCGTG
GCGGTGGCCATGGCGACTGCAGCGGCTGCCGATGCCGCGGTGATACGGCTGACACCCCCCGAGGCGGAGG------ACGA
CCTCAACCTGTATGCCACCCCTGTCCAGGAGGCCGCAGCCGCGAGGATCCAGGCCACCTTCAGAGGCTACCTGGTGAGCT
TGACATC--------AACAAGTTTGATAATGTGTTAC----TCCATCCATCTTCATGTGATTAGCTCAGTTAAAACACAA
TGTTAATACA-ATGTTGATACATACTGTACTCCTGATTTAGCAATGCACGTTAAATCAAATGTCGATGCAATTGAACAAA
TTCTGCAGAAACAGAAGCATTTCTTTTCTGATTTGCGCTGAGCATGTGACGTGCTGGTGCAGGCAAGGAAGGCTCTGTGC
GCACTGAGGGGTCTGGTGAAGCTGCAGGCGCTGATCAGGGGCCACCTGGTGAGGAAGCAGGCCAGAGCCACGCTCCGCCG
CATGCAGGCCCTCCTCATGGCACAGAACCGCGTGCGCGCGCAGCGCATGCGCATGCTCGAGGAGGAAGACCA------CG
CCGCCGCCCCTGTCGACCGCCGGTCGCCGCAGCACCCCAGACGCCGCCGCTCCTACGTAAGCCCGCACGCGAGCGCTAGT
ACGTAGAACCT------TGAGATCGTGCAGGCCGGCATGGTTGAATCAGGGAATGTG----TGGCTGCTGCATGCAGGAA
ATGGACAGGTCCGGCGAGGAGCATGCCAAGATCGTCGAGATGGACATGGGGGAGCCGCCGCGGCGGGGGCGGAGCAGCTG
CTCGGTCGCGGCGAGCGAACCATGGTCGAGAGAGCGCCGGCGAGCCGAGTGCTACGGCCCCGGCCACGGCCAGTGCTCGC
CAGCGCCGTCGGCGGCGTTCACCGAGATCACGACCCCGCGCGCCTACAGCGGGCACTTCGAGGACTTCGAGCCGGCGACG
GCGCGCGTCAGCGCGTACGTGCCGGCAGGTTACGCCGACGAGGGCGAGTCCGCGTCCGAGTTCTGCCCGAACTACATGGC
CAACACCCAGTCCTCGCGCGCCAAGGCCCGGTCCCAGAGCGCGCCGAAGCAGAGGCCCGACTCGCCGTCGCCGCTGGAGC
GGCAGCCGAGCCGGCGCCGCGGTGGCCCGGCGCCCCTGCCGAGAAGCGTCAAGATGCAGCGGTCGTCGTCGCACGTCGGC
GTGCC------ATCGTCGGCGGCCGCCATGTACGCACAGTACTACCCGTGGGCGGTGAAGCTGGACCGGTCCAGCGCGTC
GCTCCATGAGAGCGAGTGCGGGTCGACGAGCTCCGTCCTCACCGCCGCTACCACCGTCGGTTACAGCCGCTCCATGGTCG
GATTCGAGGTGCGCGACCATGATTGGATCACAACTTCACAACAAACACACAAATAAACAGAATTTCTTGGTTTCTTGTAT
TTCTTCATTTGATCGCTGACT----GATGAGAACTTCTTGATCTTTCTTCTCGTGTTGTTTCAGGTGCACAGGAACCAGT
ACTGATGAGTCACTGCTAGCAGAAGCAAGATATAGTAACTCAACTTCAGAACATTCAAAGAAAATGTGCACTGTGTGCGC
GTCAAATGTTGGCGCTTGATGCCCTGTGTCTCGATCCCGAGTTGTATGCTTTTTACGAGACTAGCAAATATGTACTATGT
GTGTTGCAACGAGAAAAAAACTCATCATACTGCTGTAGGCAAATATACGGTCTAAAACACATCGGTTGATTTTGACGCGC
GTCGAAGGTTCCCATGAAGAAGAATTGTATGCTTTCAGGCAGACCATATTTGCAGAACGGCTATGAAATGTATGCATTAT
TCGGTTGGGGCTAGAATACAACAGACAAAGAAACAATGATTGCTTTGGTAACATGGCCATGAGCGAGTGGACTTGATCAA
CGCCTGAGGCTAGTCATAGTGGGGAGTAACTTAGAGTAGTGTCATACATATGACACTAGTCTTTGTTACTACCTTCATAG
TGCAAAGTAATATATAGATAGTATCATAGATGATTGCATTTATTATGTTATAGACTCATTTTGCTTTGGGTTGCGTTATG
TTACAGTAACATATTATGTTACTCCAAACACCTCTCTCCTCATTAGCTATATGCCACATAAGCAAATTTGTCTTGAAATA
CGCTATGTTACTTGCTAAGTTACTCCCACTATGACCAGCCTGACGCACCTCCCCAGCTGCTAGCCCCGCAAAGATTGCAT
CTCTTCGTAAAATGATTTTAAGTGAACTTGACAAACTTATTAGGGCACTACTTATGCTACCTAACATCCAAAATTATAGG
ACCAAGAAGATGCACTGTGCATTTTTTCCCAAGAAAACTTTCCATTTATTTGTCATGTCATGGTAGTACAAAAAACACAG
AAATGACAAAAATTGCATCCACATCGTAGACAATCTAGCGACGATTACATGCACTAAAGCGAGCCGAAGATGCGTTGCCG
TCGTCGCCCCTCCCTCACCAGAGTAAGGTCAAACTTATATTATAG
>chr2A_355
AAGATTTGTGCGGACC----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------AAGACTCTGATGCAGGACAAGCAACCAAAC
AACCTATTTTCTTTCCGGACGGATGTGGCTAGGCCTAATATGAGCAACCAACGCACCCTAAATTTTGGATCATGACCCAA
GAGGAATGCATGGACCCTGGAGGCTGCCTGCAACTACACTTCAAAGCCCGAGCGACTGTTTCAGATTCACATCACGGCGA
GCCAAGTAGCCCCAGCGCCTCGTCATCGTGATGCATGAGACAACGATCCATGATTGACATGGACCCCGGCAGGCCAGCTC
TAGCTGATCTGAGCTGATCTGAGCTGAGCTCTCCGAGTACAGTGCACTCACTCGCTGTGTTTGTTTAAATGCGAAAGATT
CTGACTGACAGCCAGCCTTTGTAGGGAAGCTCTCCACGTTCCCCCCGTCCCGCCCGCACATGCGCTCGCCGACCGGGCGC
CAATGCCATTGCTCGGCGGCTCCCGTCGGTTGACTGACACGTTGTGCCACTGTTCCAAGCTCGCGCGGCGCGGCCGGGGT
GGTTGGCTGGTTGGTGATGGCGCTTGCAATGCCTAGCTAGGCTTCTC----TGTCGCCGGGGGCTATAATATAGTTCAGT
CCATCGGCTCTGTTGTGGCTGAGGGCGGTTCGTCGAAGGTGCCGGCGATGGGGAAGGCTGGGAGGTGGCTGAGGAGCATC
TTGGCCGGGAAAAGGGATGGCGGCAGGAGAGGGGGCAAGCGGGGGCAGGCGCAGTGTGACTCGACGCCTTTGGCCGAGCT
GCCGGCGGCTGCCATCCCGAGGGAGAAGAGGCGATGGAGCTTCCGAAGGCCTGCGGCGCCGGTCAAGACCGCCGCCGCAC
CGTCGCCGTTGGCCCTGGAAGCAGGCGGTCTGTCGGAGTCGGTGTCGGAGCGCGAGCTTGAGCAGAGCAAGCACGCCGTG
GCGGTGATCATGGCGGCC---------GCTGATCCCGCGGTGATACGGCTGACGGCACCCGAGGCGGAGGATGACCACGA
CCTCAACCTGTATGCCACCCCTGTCCAGGAGGCCGCGGCCGCAAGGATCCAGGCCACCTTCAGAGGCTACCTGGTGAGCT
TGACATC--------AACAAGTTTGATAATGTGTTCGTTGGTCCATCCATCTTCATGTGATTAGCTCAGTTAAAACACAA
TGTTAATACGTA------------CTGTACTCCTGACTTAGCAATGCACGTTGAATCAAATGTCGATGCGATTGACCAAA
TTCTGCAGAAACAGAAGCATTTCTTTTCTGATTTGAGCTGAGCATGTGACGTGCTGGTGCAGGCAAGGAAGGCTCTGTGC
GCGCTGAGGGGTCTGGTGAAGCTGCAGGCGCTGATCAGGGGCCACCTGGTGAGGAAGCAGGCCAGAGCCACGCTCCGCCG
CATGCAGGCCCTCCTCATGGCGCAGACCCGCGTGCGCGCGCAGCGCATGCGCATGCTCGAGGAAGAAGACCA------CG
CCGCCGCCCCTGTCGACCGCCGGTCGCCGCAGCACCCCAGACGCCGCCGCTCCTACGTAAGCCCCCACGCGATCGCTAGT
GCTAGTGGTACCGTGAGTGAGATCGTGCAGGCCGACATGGTTGAATCAGGGAATGTGCG-------------TGCAGGAG
ATGGACAGGTCCGGCGAGGAGCATGCCAAGATCGTGGAGATGGACATGGGGGAGCCGCCGCGGCGGGGGCGGAGCAGCTG
CTCGGTCGCGGCGAGCGAGCCATGGTCGAGAGAGCGCCCTGGAGCAGAGTACCACGGCCCC------GGCCAGTGCTCGC
CAGCGCCGTCGGCGGCGTTCACCGAGATCACGAGCCCGCGCGCCTACAGCGGGCACTTCGAGGACTTCGAGCCGGCGACG
GCGCGTGTCAGCGCGTACGTGCCGGCAGGTTATGCCGACGAGGGCGAGTCCGCGTCCGAGTTCTTCCCCAACTACATGGC
CAACACCCAGTCCTCGCGCGCCAAGGCCCGGTCCCAGAGCGCGCCGAAGCAGAGGCCCGACTCGCCGTCGCCGCTGGAGC
GGCAGCCGAGCCGGCGCCGCGGTGGCCCGGCGCCCCTGCCGAGAAGCGTCAAGATGCAGCGGTCGTCGTCGCACGTTGGC
GTGCC------GTCGTCGGCGGCCGCCATGTACGCACAGTACTACCCGTGGTCGGTGAAGCTGGACCGGTCCAGCGCGTC
GCTCCATGAGAGCGAGTGCGGGTCGACGAGCTCCATCCTAACCGCAGCTACCACCGTCGGTTACAGCCGCTCCATGGTCG
GATTCGAGGTGCGCGACCATGATTGGATCACACACACGCGCGCGCGCGCAC----------ATTTGTTGGTTTCTTGTAT
TTCTGCATTTGATCGCTGACTGACTGACGAGAACTTGTTGATCTTGCTTCTCGTGCTGTTTCAGGTGCACAGGAACCAGT
ATTGA---GTTACTGGTAGCTGAAGCAACATATAG---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------
>chr2B_463
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------TTTTGGATCATGACCCAG
GAAGAAAGCATGGACCCTGGAGGCTGCCTGCAACTGCACATCAAAGCCCGAGCGACTGTTCCAGATTCACGTCACGGGGA
GCCAAGCAGCCCCAGCGCCTCGTCATCGTGATGCATGAGACAATGATCCATGATTGACATGGACCCCGGCAGGCCAGCTC
TG----------GCTGATCTGAGCTCAGCTCTCCGAGTACAGTGCACTCACTTGCTGCGTTTGTTTAAAGGCGAAAGATT
CTGACAGACAGCCAGCCTTTGTAGGGAAGCTCACCACGTTCCTCCCGTCCCGCCCGCACATGCGCTCGCCGACCGGGCGC
CAATGCCATTGCTCGGCGGCTCCCGTCGGTTGACTGACACGTTGTGCCACTGTTCCAAGCTCGCGCGGCGCGGCCGGGGT
GGTTGGCTGGTTGGTGATGGCGCTTGCAATGCCTAGC-AGGCTTCTC----TGTCGCCGGGGGCTATAATATAGTTCGGT
CCGTCGGCTCTGTTGTGGGTGAGGGCGGTTCATCGAAGGTGGTAGCAATGGGGAAGGCTGGGAGGTGGCTGAGGAGCATC
TTGGCCGGGAAAAGGGATGGCGGCAGGAGAGGCGGCAAGCGGGGGCAGTCACAGTGTGACTCGGCGCCTTTGGCCGAGCT
GCCGGCGGCCGCGAGCCCGAGGGAGAAGAGGCGATGGAGCTTCCGGCGGCCTGCGGCGGCGGTCAAGCCCGCCGCCGCAC
CGTCGCCGTTGGCCCAGGAAGCAGGCGGTCTGTCGGTGTCGGTGTCCGAGCGCGAGCTTGAGCAGAGCAAGCACGCCGTG
GCGGTGACCATGGCGGCC---------GCCGATGCCGCGGTGATACACCTGACGGCCCCAGAGGCGGAGG------ACGA
CCTCAACCTGTATGCCACCCCTGTCCAGGAGGCCGCGGCCGCAAGGATCCAGGCCACCTTCAGAGGCTACCTGGTGAGCT
TGCCTTGTTGACGCGAACAAGTTTGATAATGTGTTAC----TCCATCCATCTTCATTTGATTAGCTCAGTTAAAACACAA
TGTTAATACA-A------------CTGTACTCCTGATTTAGCAATGCACGTTAAATCAAATGTCGCTGCAATTGAACAAA
TTCTGCAGAAACAGAAGCATTTCTTTTCTGATTTGAGCTGAGCATGTGACGTGCTAGTGCAGGCAAGGAAGGCTCTGTGC
GCGCAGAGAGGTCTGGTGAAGCTGCAGGCGCTGATCAGGGGCCACCTGGTGAGGAAGCAGGCCAGAGCCACGCTCCGCCG
CATGCAGGCGCTCCTCATGGCGCAGACCCGCGTGCGCGCGCAGCGCATGCGCATGCTCGAGGAGGAAGACAACGCCGCCG
CCGCCGGCCCTGTTGACCGCCGGTCGCCGCAGCACCCCAGGCGCCGCCGCTCCTACGTAAGCCCGCACGCGATCGCTAGT
G------GTACCGTGAGTGAGATCGTGCAGGCCGACATGGTTGAATCAGGGAATGTGTGTGTGGCTGGTGCATGCAGGAG
ATGGACAGGTCCGGCGAGGAGCATGCCAAGATCGTCGAAATGGACATGGGGGAGCCGCCGCGGCGTGGGCGGAGCAGCTG
CTCGGTCGCGGCGAGCGAACCATGGTCGACAGAGCGCCGGCGAGCCGAGTACTACGGCCCC------GGCCAGTGCTCGC
CAGCGCCGTCGGCGGCGTTCACCGAGATCACGAGCCCGCGCGCCTACAGCGGCCACTTCGAGGACTTCGAGCCGGCGACG
GCGCGTGTCAGCGCGTACGTGCCGGCAGGTTACGCCGACGAGGGCGAGTCCGCGTCCGAGTTCTTCCCGAACTACATGGC
CAACACCCAGTCCTCGCGCGCCAAGGCCCGGTCCCAGAGCGCGCCGAAGCAGAGGCCCGACTCGCCGTCGCCGCTGGAGC
GGCAGCCGAGCCGGCGCCGCAGCGGCCCGGCGCCCCTGCCGAGAAGCGTCAAGATGCAGCGGTCGTCGTCGCACGTCGGC
GTGCCCATGCCATCGTCGGCGGCCGCCATGTACGCGCAGCACTACCCGTGGTCGGTGAAGCTGGACCGGTCCAGCGCGTC
GCTCCACGAGAGCGAGTGCGGGTCGACGAGCTCCGTCCTCACCGCCGCTACCACCGTCGGTTACAGCCGCTCCATGGTCG
GATTCGAGGTGCGCGACCATGATTGGATCACAACTTGACAACACAAA-CAC----------ATTTCTTGGTTTCTTGTGT
TTCTGCATTTGATCGCTGACT----GATGAGAACTTGTTGATCTTGCTTCTCGTGCTGTTTCAGGTGCACAGGAGCCAGT
ATTGA---GTAACTGGTAGCTGAAGCAAGATATAG---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------
>SNPs
SS-SS-S-SSSSSS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S---S-----S-----S---------
----SS--------S-----S-S-S-SS-S--------SSS-S----------------------------S--------
---------S----------------------------------------------------------------------
--S-----------------------------------------------------------------------------
-----------------S--S-----------------------------------------------------------
--------------------------------------------------------------------------------
----------------------S---------------------------------------------------------
-------------------------S--------------------SSSSS------------------------S----
-------S-----------------------------------S----------------S-------------------
-------------S------------------------------------------------------------S-----
------------------------------------------------------------------------S----SS-
-------------------S-----------------SS---------------------------------S-------
------S--------S-SSSSSSSSSS--------------------------SS-------------------------
------------------------------------S-----S-------------------------------------
--------------------------------------------------------------------------------
------------SSSSSSSSSSSS--------------------------------------------------------
-----------------------------------S--------------------------------------------
--S-----------------------------------------------------------------------------
---------------------S----S-----------------------------------------------------
------------------------------------------------------------------------S-------
S-SSSSSSSSS-----------------------S--------------------------------S-----------S
--------------------------------------------------------------------------------
--------------------------------------------------S----------SSSSSS-------------
---------------------------------S----------------------------------------------
-----S----------------------------------------------------------S---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S----------------------------
--------------------------------------------------------------------------------
-------------------------------------------S-S-SSSSSSSSSSSSSS-------------------
----S-------------------------------S--------S---------S------------------------
-S---SSS--S----S----S--------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_55
-----------------------------------GATCCAGACGTTCCTAGCGG-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------
>reverse_1927
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------AACCTTGAGATCGTGCAGGC------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------
>forward_490
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------CGTGACCCAA
GAGGAATGCT----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------
>reverse_1928
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------ACCTTGAGATCGTGCAGGC------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------
>forward_563
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------GATTCACATCACGGGGA
GCT-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------
>reverse_1988
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------CTGCATGCAGGAA
ATGGACAG------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------
>forward_1928
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------GCGAGCGCTAGT
ACGTAGAA------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------
>reverse_3113
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------TGCATTAT
TCGGTTGGGGCT--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------
