>input_sequence_44032
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-------------------------------------------------------------------------ATGGGGC
AGTGCGGATGCTTCGGGGCGGCGCAGAAGGAGCAGCGGGCGGAGGCCGACCGCCTCGAGGCGCAGGAGGCCCGCGCAAGG
GCCGCCGAGGCCGCCCAGAAGAGGTAACCGCCGCCTTCTGCTCCAAGGAGCTCAAATCCTGATCCTAGTTTGTTGGTTCG
AACTCTAAGGGCCGATCAGGTAGGTTTGGTTGTTGGATAGTAGTAGGAGCGAAGAATTCGGCCGTTCAACGCGGTATAAT
CCCGACCATGCTCCGTGTCGCCCTGGTTTCTTGGTGGGATGCCCTGATTCTTGCCGGATTGGGTTCAAGGTTTATCGGAT
CGGATAGGTTTCGAGACTGCCAGAGTTCACCAGGTTGGATCTAGATGTTCGTCCCTGAAGCAGTTCATGGAACCGGATGG
AGTTGGCCCCTTCTTGAATCGCGGCGCACTACTCAGACATCGCCGTA---------------------------------
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---------ACAACAATGGCCTCACTGGAGGAAACTTACAATCAGCACTTACTGATCTTTGTTTTCTGTACTACCTTGAC
TTCTGAAGCAATGGTTCCTATGATGACATCACTGTGGTATCTGCAATTTATCTGTCTTCAAATTTTCAGACTGCTCTATC
AACCACATCGGTATGTAGACTTAGCAGATTGTGCTGCAACAAGTGTTTTTCCACTCATTGTACTTATCATAAGGCGGTTC
AACCATCTCATTGAAATCTTAAGAGTAGCAATTATATGTGTCTGACCACTCCGATTCCAAGCCGCTCCGATTGTTCAAAC
ATTCTGCTGACTAATTCCATCTTTGGCTCTTTATCTCCTCCTGGAGTTGTGATTCTGGTTTGTCACAACCTGTTTCAGAA
ATCACCTATTGTTTTGCTAAAATGATTGTGCTGGGTACTGCAATTAATTTCAGAAGATGTATTTCCCAGATCTGGTTCTA
GATTTAAGTTGGATTGATTAGGTATAATTGGATTATCAGAATTGTGTGGTAATACAAAGATTCCATTCTCCTTGTGTACT
TTATGCTTGGGAATAAAGTTCAGGATGCAGTCGTCAAGTATACATGTTCAAGATTTCTGTGTTTTTCTATCAGAAAAAAC
TTTATTTGGTTTTATTATGGTATAATATGCTTGTTTGTGTTGGTCAACGGTTGCTTTCGAGTCATTACTGTTGTTGTTGA
AATGAATAAGTTCGTTTTTCAGGAAGTTTATGTCATGCAATATCTTGTTCTGTTTAGATCACGCACTTGCATCTCTTAAC
AACATCTACCAGTTCATTTGGTCTTTTAGTTTACAGACGTATTTCTTTCCAACATCTATGTGCGGTACATCAGCTTCAGA
CCCCCCCTCCCCCTCCCTTACCGCCATGTATTTTTTTCTTATGTTTGTATAATGATTCTTTTATAGCTTACATCAGACAT
GTTGGTAAGCTTCAATGGTGTCTGCTGTGAATCAAAGTCCTATTACAACTTTGGACTGTTCATACTTTATTAACTCAACC
TGAAGTAGCGTGGTCACAATTTAGTTTTTTTAACCTTCAGGCAGCAGGAATATGAAAAGTCAGCTGCTGGACGAGCAGCA
CGAGCACATATTAAAGCTATGAAGGAGGCCAAGACATCATCAAACCAAGGAGAGCCGGTTCTGAAGGTATTTTATCATAC
TTGAGTAGTGACTACGTGTTTACGTTAAGCCTAAAGTTTAACCTTGTGAGATTCATTTCTCTGTTGGATACTTACCTTCT
GAGCTTTCGATTGTACAGTGGCAGATGGGGTAA-----------------------------------------------
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>chr5A_1_TraesCS5A01G103400
GAGGGCATCCACGACCATGGCGCCCTGGATGTGCTCCACGCACCACTCTGCCTCCTGTAGCAAGGTGGGAGGGGACCCAG
GTCGGGCTGGGCTGCAGTGTAAATGGC-------TGAGAGCCCATCTGTACAATAGATATAGCTCTTTTCTTTTATTACC
ATATGTTTTATTTCTCTAGCCTCTGTTTTGTACTTAATTCATTTAGCAAATGAGTTTTGTAAAATGTGGAGATGGACACA
TATTTAGTATTGCAATGTTAGGTGCTACCACCAAAAACTTAGGAGGAAGTTTGACTCAGCTTGAATTTTTCGTAAATAGA
GAAGCATTCAAAAATGCTATTTTGGCATGGGTTTAAATGTTTGAGGGCATTTAATAACCTTTTAAAATATTAGTTTCAAC
ATGACAAATATTCAGGGATTATCTACCACACTTTGAACATTTTAGTTTTAATGTTTGAGAAATTTGAATTTGAACTTAAA
CGGGA----------------------TTGAACCATCGCGGATTTAACAACAGTAATCATGGTGACATGGCATCATTAGC
AGAGG-TTACTGTAGCTTAATTATCCGGGCATAACAACTGGCAGCATATACTGCTATTTTATATGATGCTTTCCAACTTG
TACATAAGATGTCATCGATTCAGTTCCGTCATTGCCCTAGGAAAGTAAATAAGTTGGCACATGTTTTAACGAGTCATGCT
TATGACTCAAAAGAATTAATTTGGTGGGATGTTGTTCCGCCTAATTTTCTAATACCTCATGTACTGAATGATGTAACACT
CTCAAATTTGCAATAAAGTGGCAAGAGGCTTCCTTACAAAATAAAAAGCTGACTTGCAGGCCCTCCCCGGCTTTC---TA
GAATCTCCAAAAGCCCCTCTTCCTTTTCGCCGGATCTTCTTGTGCACATCATCGCATATCCCAAAGCAGAAAACGCAAAA
GAAACAGCAATCCAAGCAATCACGCGGCTGGTGCGAAGCAGCCAAGGACCAGCGAAGGGGGAGGGAGTTGACAATGGGGC
AGTGCGGATGCTTCGGGGCGGCGCAGAAGGAGCAGCGGGCGGAGGCCGACCGCCTCGAGGCGCAGGAGGCCCGCGCAAGG
GCCGCCGAGGCCGCCCAGAAGAGGTAACCGCCGCCTTCTGCTCCAAGGAGCTCAAATCCTGATCCTAGTTTGTTGGTTCG
AACTCTAAGGGCCGATCAGGTAGGTTTGGTTGTTGGATAGTAGTAGGAGCGAAGAATTCGGCCGTTCAACGCGGTATAAT
CCCGACCATGCTCCGTGTCGCCCTGGTTTCTTGGTGGGATGCCCTGATTCTTGCCGGATTGGGTTCAAGGTTTATCGGAT
CGGATAGGTTTCGAGACTGCCAGAGTTCACCAGGTTGGATCTAGATGTTCGTCCCTGAAGCAGTTCATGGAACCGGATGG
AGTTGGCCCCTTCTTGAATCGCGGCGCACTACTCAGACATCGCCGTA---------------------------------
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---------ACAACAATGGCCTCACTGGAGGAAACTTACAATCAGCACTTACTGATCTTTGTTTTCTGTACTACCTTGAC
TTCTGAAGCAATGGTTCCTATGATGACATCACTGTGGTATCTGCAATTTATCTGTCTTCAAATTTTCAGACTGCTCTATC
AACCACATCGGTATGTAGACTTAGCAGATTGTGCTGCAACAAGTGTTTTTCCACTCATTGTACTTATCATAAGGCGGTTC
AACCATCTCATTGAAATCTTAAGAGTAGCAATTATATGTGTCTGACCACTCCGATTCCAAGCCGCTCCGATTGTTCAAAC
ATTCTGCTGACTAATTCCATCTTTGGCTCTTTATCTCCTCCTGGAGTTGTGATTCTGGTTTGTCACAACCTGTTTCAGAA
ATCACCTATTGTTTTGCTAAAATGATTGTGCTGGGTACTGCAATTAATTTCAGAAGATGTATTTCCCAGATCTGGTTCTA
GATTTAAGTTGGATTGATTAGGTATAATTGGATTATCAGAATTGTGTGGTAATACAAAGATTCCATTCTCCTTGTGTACT
TTATGCTTGGGAATAAAGTTCAGGATGCAGTCGTCAAGTATACATGTTCAAGATTTCTGTGTTTTTCTATCAGAAAAAAC
TTTATTTGGTTTTATTATGGTATAATATGCTTGTTTGTGTTGGTCAACGGTTGCTTTCGAGTCATTACTGTTGTTGTTGA
AATGAATAAGTTCGTTTTTCAGGAAGTTTATGTCATGCAATATCTTGTTCTGTTTAGATCACGCACTTGCATCTCTTAAC
AACATCTACCAGTTCATTTGGTCTTTTAGTTTACAGACGTATTTCTTTCCAACATCTATGTGCGGTACATCAGCTTCAGA
CCCCCCCTCCCCCTCCCTTACCGCCATGTATTTTTTTCTTATGTTTGTATAATGATTCTTTTATAGCTTACATCAGACAT
GTTGGTAAGCTTCAATGGTGTCTGCTGTGAATCAAAGTCCTATTACAACTTTGGACTGTTCATACTTTATTAACTCAACC
TGAAGTAGCGTGGTCACAATTTAGTTTTTTTAACCTTCAGGCAGCAGGAATATGAAAAGTCAGCTGCTGGACGAGCAGCA
CGAGCACATATTAAAGCTATGAAGGAGGCCAAGACATCATCAAACCAAGGAGAGCCGGTTCTGAAGGTATTTTATCATAC
TTGAGTAGTGACTACGTGTTTACGTTAAGCCTAAAGTTTAACCTTGTGAGATTCATTTCTCTGTTGGATACTTACCTTCT
GAGCTTTCGATTGTACAGTGGCAGATGGGGTAAATCATCGTATGTGTCCTTGCAACTTTCAGCGTGTAAGTATGAATACT
CACTGAATCATACCGAGGGTCTTCCATTTCCTATGTGATTGTGTTATCTGGTAATGTAAACGGATGAAAAACTGTACTGT
TAAGTAGCCACCGCCTGTCTAAGTCTAAGTAGGATTGGTTTTCATTTTTCGGATGTTTAACTATTCTGAAGGAACATAAA
TGAACACTGCAGATAAGAAATGCATTATAATGGTCAGCGTTCCGTTCTTCATTATAATTTTCAATCTCTTTTCTTCTTAT
AAGGGGCCCAATATGAGGAAC---AGAGACCAGCTTCATTTCCGCACACTTCTTTTGTAAAGTCTGTAATGAGAAGTGCT
ACTGCAGTGTTTGATTTCGTGAACTGTCAGAAAGTATGAAGTGAAAATTGATGATGGGGATATAATTTAGAACAAAACTT
CAATTGTGACTTCTT-----------------------------------------------------------------
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-------------------------------------------------------------ATTGTTTTATTCTATGATC
ACCATAGTTCTACTCTGGTGCACGTTATTTTGATTGGTGTTGGGCCTTGTCTTGACACTTTTCTTCCGTGCCCTTTTCAG
GTTGTTGATGGTGTGTGGAAGCTTGTTTTCTTTTGATCATGCGATGCAGTTTGGTCACCTAACTCAGTTGTGATTTTTGT
CAGTGAAATGTACATCCTTTTAGTCACTGCTATACACGCCTATTCAGAGAGT---TATGTATTGCCCAATCTGTCTTCTA
GAAGTGTGTCGCCTGTTACTGTACAATCTATAGACAGTGT---TTGTCTGGCAAGGTAGGTATTTTGCTTACACTTCTTT
TGTACAAAGCTACGGGAGCATGATACCTGCAACTATCCAGTGGGTTTTCTTTTTACCAAAGACCAGTCGTGTAGATGTTC
TTGTTGCATTGAAAGTGC---------------------TCACTCTATGAGAAGATGGAAGAAAGGGAAGGATTATTCAT
GTGCAGTAAGCTAGATACAATCGTGTAGAGTGGCATTATCTTGAAGCGATCTTGCTGCAGCAAGGCTTT
>chr5A_1
GAGGGCATCCACGGCCATGGTGCCCTGGATGTGCTCCACGCACCACTCTGCCTCCTGTAGCGAGGTGGGAGGAGACCCAG
GTCGGGCTGGGCTGCACTGTAAATGGC-------TTAGAGCCCATATGTACAATAGGTGTAGCTCTTTTCTTTTATTACC
ATATGTTT--TTTCCCTAGCCTCTGTTTTGTACTTAATTCATTTAGAAAATGAGTTTTGTAAAATGTGGGGATGGACACA
TATTTAGTATTGCAATGTTAGGTTCTACCACCAAAAACGTAGGAGGAAGTTTGACTTAGCTTGAATTTTTCGTAAATGGA
GAAGTATTCAAAAATGTTATTTTGGCACGGTTTTAAATGTTTGAGGGCATTCAATAATCTTTTAAAATATTAATTTCAAC
ATGACCAATATCTAGGG--TATCTACCACAC-TTGAACATTTTAGTTTTAACGTTTGAGAAATTTGAATTTGAACTTGAA
CGGGA----------------------TTGAACCATCTCAGATTTAACAACAATAATCATGGTGACATGGCATCATGAGC
AAAGG-TTACTGTAGCTTAATTATCCGGGCGTCACAA-------------------------------------------
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>chr6A_1
GAGGGCATCCACGGCCA--GCGCCCTGGATGTGCTTCACGCACCACTCTGCCTCCTGTAGCGAGGTGGGAGGGGACCCAG
GTCGGGCTGGGCTGCACTGTAAATGGC-------TTAGAGCCCATCTGTACAATAGGTGTAGCTCTTTTCTTTTATTACC
ATATGTTTTATTTCTCTAGCCTCTATTTTGTACTTAATTCATTTAGCAAATGAGTTTTGTAAAATGTGGAGATGGACACA
TATTTAGTATTGCAATGTTAGGTGCTACCACCAAAAACTTGGGAGGAAGTTTGACTTAGCTTGAATTTTTCGTAAATGGA
GAAGCATTCAAAAATGCTGTTTTGGCACGGTTTAAAATGTTTGAGGGCATTTGATAACCTTTTAAAATATTAGTTTCAAC
ATGACAAACATCCACGGATTATCTACCACACTTTGAACATTTTAGTTTTAATGTTTGAGAAATTTGAATTTGAACTTGAA
CGGGA----------------------TTGAACCATCGCGGATTTAACAACAGTAATCATG-TGAGGTGGCATCATTAGC
AGAGG-TTACTGTGGCTTAATTATCCGGGC--------------------------------------------------
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>chr1A_1
GAGGGCATCCACGGCCATGGCGCCTTGGATGTGCTCCACGCACCACTCTGCCTCCTGTAGCAAGGTGGGAGGGGACCCAG
GTCGGGATGGGCTGCACTGTAAATGGCTTAGAGGTTAGAGCCCATCTGTACAATAGGTGTAGCTATTTTCTTTTATTACC
ATATGTTTTATTTCTCTAGCCTCTGTTTTGTACTTAATTCATTTAGCAAATGAGTTTTGTAAAATGTGGAGATGGACACA
TATTTAGTATTGAAATGTTAGGTGCTACCACCAAAAACTTAGGAGGAAGTTTGACTTAGCTTGAATTTTTTGTAATTGGA
GAAGCATTCAAAAATGCTGTTTTGGCACAGTTTTAAATGTTTGAGGGCATTTAATAACCTTTTAAAATATTAGTTTCAAC
ATGAAAAATATCCAGGGATTATCTACCACACTTTGAACATTTTAGTTTTAATGTTTGAGAAATTTGAATTTGAACTTGAA
CGGAA----------------------TTGAACCATCGCGGATTTAACAACAGTAATCATGGTGACATGGCATCCTTAGC
AGACG-TTACTGTAGCTTAATTATCCGGGCGTCACAA-------------------------------------------
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>chr1A_1
GAGGGCATCCACGGCCATGGCGCCTTGGATGTGCTCCACGCACCACTCTGCCTCCTCTAGCGAGGTGGGAGGGGACCCAG
GTCGGGCTGGGCTGCACT-----TGGC-------TTAGAGCCCATCTGTACAATAGGTGTAGTTCTTTCCTTTTATTATC
ATATGTTTTATTTCTCTAACCTCTGTTTTGTACTTAATTCATTTAGTAAATGAAGTTTGTAAAATGTGGAGATGGACACA
TACTTAGAATTGCAAAGTTAGGTGCTACCACCAAAAACTTAGGAGGAAGTTTGACTTAGCTTGATTTTTTCATAAATGGA
GAAGCATTCAAAAATGTTGTTTTGGCACAGTTTTAAATGTTTGAGGCCATTTAATAACCTTTTAAAATATGAGTTTCAAC
ATGACAAATATCCAGGGATTATCTGCCACAC-TTGAACATTTTAGTTTTCATGTTTGGCAAATTTGAAATTTTTATTTTA
AATTTGAGTTAGAATATGAACAATGACTTGGATCAAGTGAGGATTAGCAACAGTAAT-ATGATGACATGGCATCAGTAGC
AAGGGTTTACTGTAGCTTAATTATCCGGACGTCACAA-------------------------------------------
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>chr1D_2
-AGGGCATCCATGGCCATGGCACCCTGGATGTGCTCCACGCACCACTCTGCCTCCTGTAGCAAGGTGGGAGGGGACCCAG
GTCGGGATGGGCTGCATTGTAAATGGC-------TTAGAGCCCATCTGTACAATAGGTGTAGCTCTCTTCTTTTATTACC
ATATGTTTTATTTCTCTAGCCTCTGTTTTGTACTTAATTCATTTAGCAAATGAGTTTTGTAAAATGTGGAGATGGACACA
TATTTAGTATTGCAATGTTAGGTGCTACCATCAAAAACTTAGGAGGAAGTTTGACTTAGCTTGAATTTTTCGTAAATGGA
GAAGCATTCAAAAATGCTGTTTTGGCACAGTTTTAAATGTTTGGGGGCATTTAATAACCTTTTAAAATATTAGTTTCAAC
ATGACAAATATCCAGGGATTATCTACCACACTTTGAACATTTTAGTTTTAATGTTTGAGAAATTTGAATTTGAACTTGAA
CGGGA----------------------TTGAACCATCGCGGATTTAACAACAGTAATCATGGTGACGTGGCATCATTAGC
AGAGG-TTACTGTAGCTTAATTTTCTGGGCATCACA--------------------------------------------
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>chr5B_804
TTAAAAAG------------------------------------------------------------------------
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-------------------------------------------AAAGGCTGACTTGCAGGCCCTCCTAAGCTTTC---TA
GAATCTCCAAAAGCTCCTCTTCCTTTTCGCCGGATCTTCTTGTGCACATCATCGCATATCCCAAAGCAGAAA-CGCAAAA
GAAACCAGCAATC---CAAGCACGCGGCTGGTGCGAAGTAGCCAAGGACCAACGAAGGGGGAGGGAGTTGACGATGGGGC
AGTGCGGATGCTTCGGGGCGGCGCAGAAGGAGCAGCGGGCGGAGGCCGACCGCCTCGAGGCGCAGGAGGCCCGCGCAAGG
GCCGCCGAGGCCGCCCAGAAGAGGTAACCGCCGCCTTCTGCTCCAAGGATCTCAAATCCTGATCCTAGTTTGTTGGTTCG
AACTCATCGCGCCGATCAGGTAGGTTTGGTTGTTGGATAGTAG---GAGCGAAGAATTCGGCCGTTCAACGCGGTATAAT
CCCGACGATGCTCCGTGTCGCCCTGGTTTCTTGGTGGGATGCCCTGATTCTTGCCGGATTGGGTTCAGGGTTTATCGGAT
CGGATCGGTTTCGAGACTGCCAGAGTTCACCAGGTTGGATCGAAATGTTT-TCCCTGAAGCAATTCATGGAACCGGATGG
AGTTGGCCCCTTCTTGAATCGCACCGCACTACTCAGACATTTCTTGTCCAAAAATGGCGTGCTCTCTTCTACTCGTTTAT
TTTTAGAGCCAGACGATGTCTTGCG-------CAGACAGCTGCTGGAGGAAGGATAGACGGGTTAGGAATAAGCGGAGGC
AGGCTGTAAGACAATTTGCTGAATGGCAACGTTCCTGCAGAGCTTGCGGAGCTGAATTCCTGCTCTGTCCTGTACTGAAT
TAGTTGGTCTGCATCATTGATACAACTGCATGGCCATGTACACTATCTGGCTACATTCCTTTTGAGATAGGCCGAATTCT
TCCCAAATATTGATGCTAGGCCTGTCTATAAAATGTACTCACTGGAACTCTGCCTCTGTCTTTGCGATGCTGTATTATGT
ATGTAACAACAGCCTGTCTGGACAAATTCCATTTTCTTGTCCAGTATGCAGAGAATCCTAACCTCTCTTTGTTCTCTTGT
TATCTACGCCCTCCGATCCAAAATAATTGTCGCAATTTTGAACTGGAGTTAGTTCAAAACTGCGACACTTATTATGGATC
GGAGGTAGTACAACAATGGCCTCACTGGAGGAAACTTACCATCAGCACTTACTGATCTTTGTTTTCTGTACTACCTTGAC
TTCTCAAGCAATGGTTCCTATGATGACATCATTGTGGTATCTGCAATTTATCTGTCTTCAAATTTTCAGACTGCTCTATC
AACCACATCGGCATGTACACTTAACAGATTGTACTGCAACAAGTGTTTTTCCACTCATTGTACTTATCATAAGGCGGTTC
AACCATCTCATTGAAGTCTTAAGAGTAGCAATTATATGTGTCTGACCATTCAGATTCCAAGCCGCTCCGATTGTTCAAAC
ATTCTGCTGACTAATTCCATCTTTGGCTCTTCATCTCCTCCTGGAGTTGTGATTCTGGTTTGTCACAACCTGTTCCAGAA
ATCACCTATTGTTTTG-TAAAATGATTGTGCTGGATACTGCAACTAATTTCAGAAGATGTATTT-CCAGATCTGGTTCTA
GATTTAAGTTGGATTGATTAGGTATAATTGGATTATCAGAATTGTGTGGTAATGCAAAGGTTCCATTCTCCTTGTGTACT
TTCTGCTTGTGAATAAAGTTCAGGATGCAGCCGTCAAGTATAAATGTTCAAGATTTCTGGGTTTTTCTATCAGAAAAAAC
TTTGTTTGGTTTTATTATGGTATAGTATGCTTGTTTGTGTTGGTCAACGGTTGCTTTCGAGTCATTACTGTTGTTGTTGA
AATGAATAAGTTCGTTTTTCAGGAAGTTTATGTCATGCAATATCTTGTTCTGTTTAGATCATGCACTTACATCACTTAAC
AACATCTACCAGTTCATTTGGTCTTTCAGTTTACAGACATATTTCTTTCCAACATCTATGTGCGGTACATCAGCTTCAGA
--CCCCCTCCCCCTCCCTTACCGCCATGTATTTTTT-CTTATGTTTGTATAATGATTCTTTGATAGCTTACATCAGATAT
GTTGGTAAGCTCCAATGGTGTCTGTTGTCAATCAAAGTCCTATTACAACTTTGGACTCTTCATACTTTATTAACTCAACC
TGAAGTAGCGTGGTCACAATTTAGTTTTTTTAACCTTCAGGCAGCAGGAATATGAAAAGTCAGCTGCTGGACGAGCAGCA
CGAGCACAGATTAAAGCTATGAAGGAGGCCAAGACATCATCAAACCAAGGAGAGCCGGTTCTGAAGGTATTTTATCCTAC
TTAAGTAGTGACTATGTGTCTACGTTGGACCTAAAGTTTAACCTTGTGAGATTCATTTCTCTGTTGGATACTTATCTTCT
GAGCTTTTGATTGTACAGTGGCAGATGGGGTAAATCATCGTATGTGCCCTTGCAACCTTCAGCGTGTAAGTATGAATACT
CACTGAATCATACTCAGGGTCTTCCATTTCCTATGTGATTGTGTTATCTGGTAGTGTAAACAGATGAAAAACTGTACTGT
TAAGTAGCCACCGCCTGTCTAAGTCTAAGTAGGATTGGTTTTCATTTTTCGGATGTTTAACTATTCTGAAGGAACATAAA
TGAACACTGCAGATAAGAAATGCATTATAATGGTCAGAGTTTCGTTCTTCATTATAATTTCCAATCTCTTTTCTTCTTAT
AAGGGGCCCAATATGAGGAACAGAAGAGACCGGCTTCATTTCCGCATACTTCTTTTGTAAAGTCTGTAATGAGAAGTGCT
ACTGCAGTGTTTGATTTCGTGAACTATCAGAAAGTATGAAGTGAAAATTGATGACGGGGATATAATTTCGAACAAAACTT
CAATTGTGACTTCTTAT---------------------------------------------------------------
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--------------------------------------------------------------TTGTTTTATTCTATGATC
ACCATAGTTCTACTCTGGTGCACGTTATTTTGATTGGTGTTGGGCCTTGTCTTGACACTTTTCTTCCGTGCCCTTTTCAG
GTTGTTGATGGTGCGCGGAAGCTTGTTTTCTTTTGATCACGCGATGCAGTTTGGTCACCTAACTCATTTGTGATTTTTAT
CAGTGAAATGTACATCCTTTTAGTCACTGCTATACACGCTTATTCAGAGAGAGTGTATGTATTGCCCAATTTGTCTTCTA
GAAGTGTGTGGCGTGTTACTGTACATTCTATAGACAGTGGTGGTTGTCTGGCAAAGTAGGTATTTTGCTTACACTTCTTT
-GTACAAAGCTACTGGAGCATGATACCTGCAACTATCCAGTGGGTTTG--------CAAAGACCAGTCGTGGAGATGTTC
TTGTTGCATTGAAAGTGTTCACTCTGCATTTGGAAGTGTTCACTCTATGAGAAGATGGAAGAAAGGGAAGGATTATTCAC
GTGCAGTAAGCTAGGTACAATCCTGTAGAGTGGCATTATCTTGAAGCGATCTTGTTGCAGCAAGGCTTT
>chr5D_804
TTAAAAAG------------------------------------------------------------------------
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-------------------------------------------AAAGGCTGACTTGCAGGCCCTCCGCGGCTTTCTAGTA
GAATCTCCAAAAGCCCCTCTTCCTTTTCGCCGGATCTTCTTGTGCACATCATCGCATATCCCAAAGCAGAAA-CGCAAAA
GAAACCAGCAATC---CAAGCACGCGGCTGGTGCGAAGCAGCCAAGGACCAACGAAGCGGGAGGGAGTTGACGATGGGGC
AGTGCGGATGCTTCGGGGCGGCGCAGAAGGAGCAGCGGGCGGAGGCCGACCGCCTCGAGGCGCAGGAGGCCCGCGCAAGG
GCCGCCGAGGCCGCCCAGAAGAGGTAACCGCCGCCTTCTGCTCCAAGGATCTCAAATCCTGATCCTAGTTTGTTGGTTCG
AACTCATCGCGCCGATCAGGTAGGTTTGGTTGTTGGATAGTAG---GAGCGAAGAATTCGGCCGTTCAACGCGGTATAAT
CCCGACCATGCTCCGTGTCGCCCTGGTTTCTTGGTGGGATGCCCTGATTCTTGCCGGATTGGGTTCAGGGTTTATCGGAT
TGGATCGGTTTCGAGACTGCCAGAGTTCACCAGGTTGGATCGAAATGTTCGTCCCTGAAGCAGTTCATGGAACCGGATGG
AGTTGGCCCCTTCTTGAATCGCGCCGCACTACTCAGACATTTCTTGTCCCAAAATGGCGTGCTCTCTTCTACTGCGTTAT
TTTTAGAGCCAGACGATGTCTTGCGGGTGAAGCAGACAGCTGCAGGAGGAAGGATAGACGGGTTAGGAATAAGCGGATGC
AGGCTGTAAGACAATTTGCTGAATGGCAACGTTCCTGCAGAGCTTGCCGGGCTGAATTCCTGCTCTGTCATGTACTGAAT
TAGTTGGTCTGCATCATTGATACAACTGCATGGCCATAT------------------------------------ATTCT
TCCCAAATATTGATGCTAGGCCTGTCTATAAAATGTACTCACTGGAACTCTACCTCTGTCTTTGCGATGCTGTATTATGT
AAGTAACAACAGCCTATCTGGACAAATTCCATTTTCTTGTCCAGTATGAAGAGAATCCTAACCTCTCTTTGTTCTCTAGT
TATCTACTCCCTCCGATCCAAAATAAGTGTCGCAATTTTGAACTGGAGTTAGTTCAAAACTGCGACACTTATTATGGATC
GGAGGTAGTACAGCAATGGCCTCACTGGAGGAAACTTACCATCAGCAATTACTGATCTTTGTTTTCTGTACTACCTTGAC
TTCTCAAGCAACGGTTCCTATGATGACATCTTTGTGGTATCTGCAATTTATCTGGCTTCAAATTTTCAGACTGCTCTATC
AACCACATCAGCATGTACACTTAGCAGATTGTGCGGCAACAAGTGTTTTTCCACTCGTTGTACTTATCATAAGGCGGTTC
AACCATCTCATTGAAGTCTTAAGAGTAGCAATTAT--GTGTCTGACCATTCCGATTCCAAT-------------------
-------TGACTAATTCCATCTTTGGCTCTTCATCTCCTCCTGGAGTTGTGATTCTGGTTTGTCACATCCTGTTTCAGAA
ATCACCTAGTGTTTTGCTAAAATGATTGTGCTGGGTACTGCAACTAATTTCAGAAGATGTATTT-CCAGATCTGGTTCTA
GATTTAAGTTGGATTGATTAGGTATAATTGGATTATCAGAATTGTGTGGTAATACAAAGATTCCATTCTCCTTGTGTACT
TTATGCTTGTAAATAAAGTTCAGGATGCAGTCGTCAAGTATACATGTTCAAGATTTCTGGGTTTTTCTATCAGAAAAAAC
TTTGTTTGGTTTTATTATGGTATAATATGCTTGTTTGTGTTGGTCA-CGGTTGCTTTCGAGTCATTACTGTTGTTGTTGA
AATGAATAAGTTCGTTTTTCAGGAAGTTTATGTCATGCAATATCTTGTTCTGTTTAGACCATGCACTTACATCTCTTAAC
AACATCTACCAGTTCATTTGGTCTTTTAGTTTACAGACGTATTTCTTTCCAACATCTATGTGTGGTACATCAGCTTCAGA
-CCCCCCTCCCCCTCCCTTACCGCCATGTATTTTTTTCTTATGTTTGTATAATGATTCTTTTATA---------------
-----------------GTGTCTGCTGTCAATCAAAGTCCTATTACAACTTTGGACTGTTCATACTTTATTAACTCAACC
TGAAGTAGCGTGGTCACAATTTAGTTTTTTTAACCTTCAGGCAGCAGGAATATGAAAAGTCAGCTGCTGGACGAGCAGCA
CGAGCACAGATTAAAGCTATGAAGGAGGCCAAGACATCATCAAACCAAGGAGAGCCGGTTCTGAAGGTATTTTAGCCTAC
TTGAGTAGTCACTACGTGTCTACGTTGGACCTAAAGTTTAACCTTGTGAGATTCATTTCTCTGTTGGATACTTATCTTCT
GAGCTTTTGATTGTACAGTGGCAGATGGGGTAAATCATCATATGTGTCCTTGCAACCTTCAGCGTGTAAGTATGAATACT
CACTGAATCATACTCAGGGTCTTCCATTTCCTATGTGATTGTGTTATCTGGTAGTGTAAACGGATGAAAAACTGTACTGT
TAAGTAGCCACTGCCTGTCTAAGTCTAAGTAGGATTGATTTTCATTTTTCGGATGTTTAACTATTCTGAAGGAACATAAA
TGAACACTGCAGATAAGAAATGCATTATAATGGTCAGAGTTTCGTTCTTCATTATAATTTTCAATCTCTTTTCTTCTTAT
AAGGGGCCCAATATGAGGAACAGAAGAGACCAGCTTCATTTCCGCACACTT---TTGTAAAGTCTGTAATGAGAAGTGCT
ACTGCAGTGTTTGATTTCGTGAACTATCAGAAAGTATGAAGTGAAAATTGATGACGGGGATATAATTTAGAACAAAACTT
CAATTGTGACTTCTTACTGGCGTTTTGGCTCCCGGGAGCATTTGCTCCCGGGTGAACAGTAACACGAAAAAAAATATTAT
ATGTTTTCGAAAAATTCTGAAATTTTTTGTAGATGATTGTATTAGTGTTGCAAACATGCATGACAATTTTCATGCGAAAC
GGAGCTGCGGTGTTTCGTCGGCAAAAAAACAAACAAATTTGGGGTAACTTTTGGTGTTCGATTTGTTATTTTTGTACAAG
CCAAAATGTTTAATATTTTTGCCTCAAAATTTGCAGGTAGCATTTGGATGTGACTAAGTACACAAACAAATTTTGTCTTG
ATTTTTTTTCATTTCAACAATTTTTTTTGGCCACGGGAGCCAAATTGACTTTCCGCTTCTTATTGTTTTATTCTATGATC
ACCATAGTTCTACTCTGGTGCACGTTATTTTGATTGGTGTTGGGCCTTGTCTTGACACTTTTCTTCCGTGCCCTTTTCAG
GTTGTTGATGGTGCGCGGAAGCTTGTTTTCTTTTGATCAGGCGATGCAGTTTGGTCACCTAACTCATTTGTGATTTTTGT
CAGTGAAATGTACATCCTTTTAGTCACTGGTATACACGCTTATTCAGAGAGAGTGTATGTATTGCCCAATCTGTCTTCTA
GAAGTGTGTCGCGTGTTACTGTACATTCTAT--ACAGTGGTGGTTGTCTGGCAAGGTAGGTAT-----------------
----------TACTGGAGCATGATACCTGCAACTATCCAGTGGGTTTTCTTTTTACCAAAGACCAGTCGTGTAGATGTTC
TTGTTGCATTGAAAGTGTTCACTCTGCATTTGGAAGTGTTCACATTATGAGAAGATGGAAGAAAGGGAAGGATTATTCAT
GTGCAGTAAACTAGATACAATCGTGTAGAGTGGCATTATCTTGAAGCGATCTTGTTGCAGCAAGGCTTT
>SNPs
-------------S------------------------------------------------------------------
----------------S------------------S--------------------S-S---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------S--------------------S--
---------------------------S--S-------------------------------------------------
-----------S-----------------------------------------------------------------S--
--------------------------------------------------------------------------------
--------------------------------S----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S-------------------S-------------
------------------------------------------------------------------------S-------
-----SSSS-SS-SSS---S-------------------------------S--------------------S-------
--------------------------------------------------------------------------------
-------------------------------------------------S------------------------------
-----SSS-S---------------------------------SSS----------------------------------
-------------------------------------------------------------------S------------
-----S-----------------------------------S-S------------------------------------
-----------------------S----------------SS-SSSS---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------S----------------------------------------
----S--------------------------S------------------------------------------------
-----------S-----S--------------------------------------------------------------
---------------S--------------------------------S-------------------------------
-------------------------------S------------------------------------------------
-------------------------------------------S--------------------S---------------
--------------------------------------------------------------------------------
---------S-------------------------------------------------S--------------------
---S----------------------------------------------------------------------------
-------------------------------------------------------------S------S-----------
--------------------------------------------------------------------------------
S----------------------------------------------------------------------------S--
-----------S----------------S---------------------------------------------------
--------------------------------------------------------------------------------
--------S-------------------------------------------------------------------S---
-------------------S------SSS---------------------------------------------S-----
-------S------------------------------------------------S-----------------------
-------------SS--------------------------------------S--------------------------
--------------------------------------------------------------------------------
-------------------------------------S---S--------------------------------------
--------------------------------------------------------------------------------
-------------------------S----------------------------S-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------S-S-----------------------S--------------------------S-------------
---------------------------------------S-----------S----------------------------
------------S------------S-------------S----------------------------------------
S------------S------------------------------------------------------------------
-----------------S--------------------------------------------------------------
------------------------------------------------------S--------------
>forward_763
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------GTGGGATGTTGTTCCGCCTA-------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------
>reverse_2289
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------------CTCCGATTCCAAGCCGCTC-------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---------------------------------------------------------------------
>forward_1348
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------TCTTGCCGGATTGGGTTCAA------------
--------------------------------------------------------------------------------
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>reverse_3288
--------------------------------------------------------------------------------
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-------CGATTGTACAGTGGCAGATGG----------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------------------
>forward_1486
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------CACTACTCAGACATCGCCGT----------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------
>reverse_4280
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------TGCGATGCAGTTTGGTCACC---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------
