>input_sequence_43990
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------CTATAAATC
GGCACCCCACTCCCTGCATCTGAAAAATTTCAAGCCTCCCTCCCATC----AACACCACACCACACAGCATTTCATATGC
AGTAGTAGCCATCTTCTCCACCTCCTCCTCCCGCCTTCCAGCTAGCCACCTAGCTCACTATCACATCAT--------CCA
CACCAACTCATATTGATTCCGTTCCCACCTGCTCACCGTC----GCCATGCCAATGGGCAGCAGCAGCGCCGCCATGCCC
GCCCTCCCTCCCGGCTTCCGGTTCCACCCCACCGACGAGGAGCTCATCGTCCACTACCTCGGCAGGCAGGCCGCGTCCAT
GCCCAGCCCCGTGCCCATCATCGCCGAGGTCAACATCTACAAGTGCAACCCATGGGACCTCCCCGGTAC--ATACATGAC
TAACTAATCAACAG--CATCCATCGATTAATCAACTCCAGCTCTGCTCTAATTACTGGAGTATTAATTTTCTTGTTTGAA
CTTTGCAGGCAAGGCCTTGTTCGGGGAGAATGAGTGGTACTTCTTCAGCCCCCGGGATCGCAAGTACCCCAACGGCGCGC
GCCCCAACCGCGCCGCCGGGTCCGGCTACTGGAAGGCCACCGGCACCGACAAGGCCATCCTGTCCACGCCGGCCAACGAG
AGCATCGGCGTCAAGAAGGCGCTCGTCTTCTACCGGGGCAAGCCGCCCAAGGGCGTCAAGACCGACTGGATCATGCACGA
GTACCGCCTCACCGCCGCCGACAACCGGACCACCAAGCGCAGAGGATCCTCCATGAGGGTGAGCATTTTTTTTTCTTCTT
CGCTTATTTATTTATTTATTATCTACT--------GTATTTTCTTCACTTTGGTAAGAGCAGTTGCTTGTACCATAAGCT
ACTACAACTTACTCGACTTAATTGTTTGCATTTGAAATGTTTGTTTAATCAGCGAATTAATCCGGGATTTTTATTTA---
-TTTGTTCGAGCAGCTGGATGACTGGGTGCTGTGTAGGATCCACAAGAAGTGCAACAACTTGCACAACTTCTCCTCCTCT
GACCAGGAACAGGAGCACGAGCAGGAGAGCTCCACCACCGTGGAGGACTCGCACAACAACCACACCGTGTCGTCGCCCAA
GTCGGAGGCCTTCGACGGCGACGGCGACGACCAGCTGCAGCTGCAGCAGTTCCGCCCCATGGCGATCGCCAAGTCGTGCT
CCCTCACCGACCTGCTCAACACCGTCGACTACGCCGCGCTCTCGCACCTCCTCCTCGACGGCGCCGGCGCCGGCGCCTCG
TCGTCGGACGCCGGAGCAGACTACCAGCTGCCGCCGGAAAACCCGCTCATCTACTCGCAGCCTCCATGGCAACAAACGCT
ACACTATAATAACAATAACAATGGCTACGTGAACATCGACACCATCGACGTGCCTCAGATACCCGAGGCCCGTGTAGATG
ACTACGGCATGAATGGCGATAGGTACAACGGCATGAAGAGGAAGAGGTCCAGCGGCAGTTTGTACTGCAGCCAGCTGCAG
CTCCCGGCGGATCAGTACAGCGGCATGCTGATCCATCCGTTCCTCAGCCAGCAGCTGCACATGTGAAGAACCAGAGAGCT
TGGATCGAAGAGATCATCGTTGTTCCATTTGAACTTGCTGTAGATCGAGGAGATCGCCCGTTGTGGCAGATAGGCAGGGA
TCTAGCTTGCTTGCTGCGTCGTGAACTCCCAACCGATAAGAACGGACAAATTTCAGAATTCTTGGTGTAGCACAAAAGCT
GTAAATTACGGGG-TTTATTGTGAA-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------------------------------------
>chr5A_1_TraesCS5A01G143200
AGCGAACGAAGGAAGGAGGCAGCGGGCGGGCAGAGAGACAGAGGCAGGCACGAGCTGGCCACGAGCCCGCAAGACGCCAA
AGGGCGCATATCATTGGCGGCAACCACAAGGCGGACAGGTGTCGCAGCCGGTGTCGTCCTCACCATTCCTGCTTGCTACT
ACTGCTAACCAAAAGAAAAGAAGAGAAGAGA----GAAAAAAAAAAGTCTGTTCTTTTGCGTTGGTTATCCACGACTCGT
TCGTCCCCCCTCCACACACGACGTGGAGCCACGCCGATGATTAGCTCACCCGTACGCACACAGGGGCAGATTAGCCATTT
GCCCGTCTCACCTTCACCGCGGCGAGAAACTTGTGCACTTGATCGCGCTCGCACGTGTCCGCCTGTGTTT----------
--TGCGCTCCACGCATTAATTCTGGTGTGAATCTAGGCTTGTCTAGTAGTAGTCTTTGGGGTGTTTGTTTTCAGGGATAT
TTTTTGTAGGGCCTAAAAAAAGCCTTTTTTAGAGACTTTTTTATCAAACAGAGAGACTTTTTACGAAGTAAACTAGTTAT
TTAGGACTAAATGAAGAAGACCCTCAAAGAAAGTCTTTTGAGGACTTTTCCAACAATGCCCCTCCATGAACCTATTGGCC
CGCCATCCCATGGTGTTATTTAATTATTATTTTTCTGTATATTATGGGCAACATGGTCATTTAATAACCTCTAGAAAGGG
ACTATAAACTTTTTAGTCTATGAAAAAACAGGGAGACTTTTAGGGACTAGGGACTTTTTAGTTGAGACTAGGAAAAGTTT
TAGGACTAGAGAACCAAACACCACCTTAGTTTTGCCCTTGTAAGGCAGAATATAAC-----TACACTCCACTGATGCAAG
-------AAGTTCATTAGCCTTGGTATTTGAAAAGATATG---TACGTGTTGACGTAAATAAACTAAGTAATTAGTTGCC
GATTCTGCCCCTCGCGATCCTGATCCACCCACCACCCCGCTGCTGACTCGCAAGCGGACAAGGCATGGCAGCTATAAATC
GGCACCCCACTCCCTGCATCTGAAAAATTTCAAGCCTCCCTCCCATC----AACACCACACCACACAGCATTTCATATGC
AGTAGTAGCCATCTTCTCCACCTCCTCCTCCCGCCTTCCAGCTAGCCACCTAGCTCACTATCACATCAT--------CCA
CACCAACTCATATTGATTCCGTTCCCACCTGCTCACCGTC----GCCATGCCAATGGGCAGCAGCAGCGCCGCCATGCCC
GCCCTCCCTCCCGGCTTCCGGTTCCACCCCACCGACGAGGAGCTCATCGTCCACTACCTCGGCAGGCAGGCCGCGTCCAT
GCCCAGCCCCGTGCCCATCATCGCCGAGGTCAACATCTACAAGTGCAACCCATGGGACCTCCCCGGTAC--ATACATGAC
TAACTAATCAACAG--CATCCATCGATTAATCAACTCCAGCTCTGCTCTAATTACTGGAGTATTAATTTTCTTGTTTGAA
CTTTGCAGGCAAGGCCTTGTTCGGGGAGAATGAGTGGTACTTCTTCAGCCCCCGGGATCGCAAGTACCCCAACGGCGCGC
GCCCCAACCGCGCCGCCGGGTCCGGCTACTGGAAGGCCACCGGCACCGACAAGGCCATCCTGTCCACGCCGGCCAACGAG
AGCATCGGCGTCAAGAAGGCGCTCGTCTTCTACCGGGGCAAGCCGCCCAAGGGCGTCAAGACCGACTGGATCATGCACGA
GTACCGCCTCACCGCCGCCGACAACCGGACCACCAAGCGCAGAGGATCCTCCATGAGGGTGAGCATTTTTTTTTCTTCTT
CGCTTATTTATTTATTTATTATCTACT--------GTATTTTCTTCACTTTGGTAAGAGCAGTTGCTTGTACCATAAGCT
ACTACAACTTACTCGACTTAATTGTTTGCATTTGAAATGTTTGTTTAATCAGCGAATTAATCCGGGATTTTTATTTA---
-TTTGTTCGAGCAGCTGGATGACTGGGTGCTGTGTAGGATCCACAAGAAGTGCAACAACTTGCACAACTTCTCCTCCTCT
GACCAGGAACAGGAGCACGAGCAGGAGAGCTCCACCACCGTGGAGGACTCGCACAACAACCACACCGTGTCGTCGCCCAA
GTCGGAGGCCTTCGACGGCGACGGCGACGACCAGCTGCAGCTGCAGCAGTTCCGCCCCATGGCGATCGCCAAGTCGTGCT
CCCTCACCGACCTGCTCAACACCGTCGACTACGCCGCGCTCTCGCACCTCCTCCTCGACGGCGCCGGCGCCGGCGCCTCG
TCGTCGGACGCCGGAGCAGACTACCAGCTGCCGCCGGAAAACCCGCTCATCTACTCGCAGCCTCCATGGCAACAAACGCT
ACACTATAATAACAATAACAATGGCTACGTGAACATCGACACCATCGACGTGCCTCAGATACCCGAGGCCCGTGTAGATG
ACTACGGCATGAATGGCGATAGGTACAACGGCATGAAGAGGAAGAGGTCCAGCGGCAGTTTGTACTGCAGCCAGCTGCAG
CTCCCGGCGGATCAGTACAGCGGCATGCTGATCCATCCGTTCCTCAGCCAGCAGCTGCACATGTGAAGAACCAGAGAGCT
TGGATCGAAGAGATCATCGTTGTTCCATTTGAACTTGCTGTAGATCGAGGAGATCGCCCGTTGTGGCAGATAGGCAGGGA
TCTAGCTTGCTTGCTGCGTCGTGAACTCCCAACCGATAAGAACGGACAAATTTCAGAATTCTTGGTGTAGCACAAAAGCT
GTAAATTACGGGG-TTTATTGTGAAATAAATTAATCCAGTATTGTTACAAGATACTCCTACATGTGATGATCATCATATA
TCCT------AGGGTTCTTAGTTAATTCCAGAATGCAAAACCAACGACGCATCCATTCCATGGCCGACACACGCAGCCGG
ACTTGTTAATTAACTGCTGGCGTACCCAGCACTAGTTAATGATCGAGGCT-TGTTGCTAGCGTGTGCGGTCTGAACCCTT
CCCTTGTCCACCGTACAGCCAGGAGCAATTAACTAACGCTCGCTCGAATGATCCATA---GCATCTGTCACCGGAAACCA
AAGCCCGAATCAAATACACATCATTTAACTAAGGCTCCGGGGCCAATCGAACGGCAAAACGTCAGCTCGCAGGAACCGTC
CAGGCGTGGAATTAAAATTGTGGCAGGCCGGACAGATGAAGAAGGCGGCGGCACACGCCGCTCAACTGCTGCTGAACTTA
ATTTAGTTGCCGCGCATGCTGGTATATATCACACGTTGCGAATTA--GATAGGCTAGAAACTGGAATCTTCCGTCCTCCT
CCATTAGGTTAATCACAAG----------AGCGTCTCCCTATTGGAGACAGAGC------TTTGTTTATGCTTGCGGCCC
TTTCGAACCATCGTGTACCA-----AGCCAAAGAAGATAATGCAGAGTACTTAATTGGCTTA---GCCTTTCCGATCCGG
TCTACCTCTACGGCTCTACCACCCCATGGTTGGGACTTGGAGCGATCACACCAAAGAAACTTAATCTAGTAGCTACACGT
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------AGCGGAAGCATCAAGTCACACATGCTTACGGGGACTTGTTACAGTTAATTGG
TACTTATACGCTAGTTTAGTCGCCGGATAGCCTAACCGCACGCGCGATTAAAAGGTGATTGAGACATATGAGGGTGGTTA
AGATAAGAATGGTGCGTCCTAATCAGGCTTCAGCGTAGGCTTAGCTAAGTCATGACGATGATGCCCTAAGCATCGGTTAT
GATAGATTATCTCTAAGCAGGCATGCATGCATGCTTG----CGAAAAGCTAGT
>chr5D_1
AGCGAAGGAAGAAAGGAGCCAGCGGCCGGTCATAGAGACAGAGGCAGGCACGAGCTGGCCACGAGCCCGCAAGACGCCAA
ACGGTGCATATCATTGGCGGCAACCACAAGGCGGACAGGTGTCGCAGCCGGTGTCGTCCTCACCATTGCTGCTTGCTACT
ATTGCTAACCAAAAGAAAAGAAGAGAAGAGA----GG-GAAAAAAAGTCCGCTCTTTTGCGTTGGTTATCCACGACCCGT
TCGTCCCCCCTGCACACACGACGTGGAGCCACGCCGATGATTAGCTCACCCGTACGCACACAGGGGCTGATTAGCCATTT
GCCCGTTTCACTTTCACCGCGGTGAGAAACTTGTGCATTTGATCGCGCTCGCACGTGTCCGCCTGTGTTTGCACTTGTGT
TTTGCGCTCCAAGGATTAATTCCGGTGTGAATCTAGGCTTGAGTAGTTTTTCTACGCCCCGGCAGCAGTA----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------TTAGTTTTGCCCTCGTGAGGCAGAATATAACTTCAGTACACTCCACTGATGCAGA
GGCAGACAAGTTCATTAGTCTTGGTATCTGAAAAGAAAGGTAATACGTGATGACGTAAATAAACAAAGTAATTAGTTGCC
GATTCTGCCCCTCGCGATACTAATCCACCCACCACCTCGCTGCTGACTCGCAAAGAGACAAGCCATGGCACCTATAAATC
CACGCCCCACTCCCTGCATCTGAAAAATTTCAAGCCT----CCCATC----AACACCACACCACACAGCATTTCATATGC
AGTAG---CCATCTT---CTCCTCCTCCTCCCGCTTTCCAGCTAGCCACCTAGCTCACTATCACATCATCCAGCAGCCCA
CACCAACTCATACTGATTCCGTTCCCACCTGCTCGCCATCGCCAGCCATGCCAATGGGCAGCAGC---GCCGCCATGCCC
GCCCTCCCTCCCGGCTTCCGGTTCCACCCCACCGACGAGGAGCTCATCGTCCACTACCTCGGCAGGCAGGCCGCGTCCAT
GCCCAGCCCCGTGCCCATCATCGCCGAGGTCAACATCTACAAGTGCAACCCATGGGACCTCCCCGGTATATATACATAAC
TAAAACTAATCGACTCCATCCTTCGATCAATCAGCTCCAACTCTGCTCTGGTTAC--------TAATCTTCTTGTTTGAA
CTTTGCAGGCAAGGCCTTGTTCGGGGAGAATGAGTGGTACTTCTTCAGCCCCCGGGATCGCAAGTACCCCAACGGCGCGC
GCCCCAACCGCGCCGCCGGGTCCGGCTACTGGAAGGCCACCGGCACCGACAAGGCCATCCTGTCCACGCCGGCCAACGAG
AGCATCGGCGTCAAGAAGGCGCTAGTGTTCTACAGGGGCAAGCCGCCCAAGGGCGTCAAGACCGACTGGATCATGCACGA
GTACCGCCTCACAGCCGCCGACAACCGGACCACCAAGCGCAGAGGATCCTCCATGAGGGTGGGCATTTTTTTTTC--CTT
CACTTATTTATTTATTTACTATTTTTGAGGCATT----TTTTCTTCACTTTGGTAAGAGCAGTTGCTTGTACCATAAG--
-CTACATCTTACTCGACTTAATTGTTTGCATTTGAAAAGCTTGTTTAATCAGTGAATTAATCTGGGTTTTTTATTTA---
-TTTGTTCATGCAGCTGGATGACTGGGTGCTGTGTAGGATCCACAAGAAGTGCGGCAACTTGCCCAACTTCTCCTCCTCT
GACCAGGAACAAGAGCATGAGCAGGAGAGCT---CCACCGTGGAGGACTCGCAGAACAACCACACCGTATCGTCGCCCAA
GTCGGAGGCCTTCGACGGCGACGGCGACGACCAGCTCCAGCTGCAGCAGTTCCGCCCCATGGCGATCGCCAAGTCGTGCT
CCCTCACCGACCTGCTCAACACCGTCGACTACGCCGCGCTCTCGCACCTCCTCCTCGACGGCGCCGGCGCC------TCG
TCGTCGGACGCCGGAGCAGACTACCAGCTGCCGCCGGAAAACCCACTCATCTACTCGCAGCCTCCATGGCAACAAACGCT
ACACTATAACAATAA---CAACGGCTACGTGAACAACGACACCATCGACGTGCCTCAGCTACCCGAGGCGCATGTAGATG
ACTACGGCATGAATGGCGATAGGTATAACGGCATGAAGAGGAAGAGATCCAGCGGCAGCTTGTACTGCAGCCAGCTGCAG
CTCCCGGCGGATCAGTACAGCGGCATGCTGATCCATCCGTTCCTCAGCCAGCAGCTGCACATGTGAAGAACCAGAGAGCT
TGGATCGAAGAGATCATCATTGTTCCATTTGAACTTGCTGTAGATCGAGGGGATCCCCCGCTGTGGCAGATAGGCAGGGA
TCTAGCTTGCTTGCTGTGTCGTGACCGACCGACCGATAAGAACGGACAAATTTCAGAATTCTTGGTGTAGCACAAAAGCT
GTAAATTACGGGGGTTTATTGTGAAATAAATAAATCCAGTATTATTACAAGATACTCCTATATGCGATGATCATCATATA
TCCTAGACCTAGGCTTGTTAGTTAATTCGAGAATGCAAAACCAACGACGCATCCATTCCATGGTCGACACACGCAGCCGG
ACTTGTTAATTAACTGCTGGCGTACCCAGCACTAATTAATGAGCGAGGCC-TGTTGCTAGCGTGTGCGGTCTCAACCCTT
CCCTTGTCCACCGTACAGCCAGGAACAATTAACTAACGCTCGCTCGAATGATCCATA---GCATTTGTCACCGGAAACCA
AAGTCCGACTCAAAGACACATCATTTAACTAAGGCTCCAGGGCCAATAGAAGGGCAAAACGTCAGCTCGCAGGAACCATC
CAGGCGTGG-ATTAAAATTGTGGCAGGCCGGACAGATGAAGAAGGCGGCGCCACACGCCGCTCAACTGCTGCTGAACTTA
CTTTAGTCGCCGCGCATGCTGGTATATATCACACGTTGCGAATTA--GATAGGCTCGAAACT-GAATCTTCCGTCCTCCT
CCATTAGGTTAATCACAAGG----------GCGTCTCCCTATTGGAGACACAGATTTGTTTTTGTTTATGCTTGCGGCCC
TTTCGAACCATCGTGTACCATACCAAGCC-AAGAAGATAATGCAGAGTAATTAATTGGCTTA---GCCTTTCCGATCCGG
TCTACCTCTACGGCTCTACCACCCCATGGTTGGGACTCGGAGCGATCACACCAAAGAAACTTAATCTAGTAGCTACACGT
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------AGCGGAAGCATCAAGTCACACATGCTTACGGGGACTTGTTACAGTTAATTGG
TACTTATACACTAGTTTAGTCGCCGGATAGCCTAACCACACGCGCGATTAAAAGGTGATTGTGACTGCTGAGGGTGGTTA
AGATAAGAATGATGCGTCCTAATCAGGCTTCAGCTTAGGCTTAGCTAAGTCGGGACGATGATGCCCTAAGCATCGCTTAT
GATAGATTATCTCTAAGCAGGCATGCATGCATGCTTGC---------------
>chr5B_1
AGCGAACGAAGGAAGGAGCCAGCGGCCGGTCATAGAGACAGAGGCAGGCACGAGGTGGCCACGAGCCCGCAAGACGCCAA
AGGGTGCATATCATTGGCGGCAAGCACAAGGCGGACAGGTGTCGCAGCCGGTGTCGTCCTCACCCTTCCTGCTTG---CT
ATTGCTAACCAAAAGAAAAGAAGGGAAGAGAAGAAGAAGAAAAAAAGTCGGTTCTTTTGCGTTGGTTATCCACGACCCGT
TCGTCCCCCCTGCACACACGACGTGGAGCCACGCCGATGATTAGCTCACCCGTACGCCCAGAGGGGCAGATTAGCCATTT
GCCCGTTTCGCTTTCACCGCGGTCAGAAATTTGTGCATTTGATTGCACTCGCACGTGTCCACCTGTGTTTGCACTTGTGT
TTTGCGTTACAAGGATTAATCCTGGTGTGAATCTAGGCTTGAATGGTT--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------TTAGTTTTGCCCTCGTGAGGCAGAATATAAC-----TACAATCCACTGATGCAAG
-------AAGTTGATTGGTCTTGGTATTTGAAAAGATATG---TACGTGATGACGTAAATAAACGAAGTAATCAATTGCC
GATTCTGCCCCTCGCGATACTGATCCACCCACCACCTCGCTGCTGACTCGCAAGCGGACAAGCCATGGCACCTATAAATC
CACGCCCCGCTCCCTGCATCTGAAAAATTTCAAGCCT----CCCTCCCATAAACACCACACCACACAGCATTTCATATGC
AGTAG---CCATCTTCTCCTCCTCCTCCCCCCGCCTTCCAGCTAGCCACCTAGCTCACTATCACATCATCCAGCAGCCCA
CACCAACTCATATTGATTCCGTTCCCACCTGCTCGCCATCGCCAGCCATGCCAATGGGCAGCAGC---GCCGCCATGCCC
GCCCTCCCTCCCGGCTTCCGGTTCCACCCCACCGACGAGGAGCTCATCGTCCACTACCTCCGCAGGCAGGCCGCGTCCAT
GCCCAGCCCCGTGCCCATCATCGCCGAGGTCAACATCTACAAGTGCAACCCATGGGACCTCCCCGGTACATATATATAGC
TAAAACTAATCGACGTCATCCATCGATCAATCAGCTCCAACCCTGCTCTGATTAT--------TAATCTTCTTG-TTGAT
CTCTGCAGGCAAAGCTTTGTTCGGGGAGAATGAGTGGTACTTCTTCAGCCCCCGGGATCGCAAGTACCCCAACGGCGCGC
GCCCGAACCGCGCCGCCGGGTCCGGCTACTGGAAGGCCACCGGCACCGACAAGGCCATCCTGTCCACGCCGGCCAACGAG
AGCATCGGGGTCAAGAAGGCGCTCGTGTTCTACAGGGGCAAGCCGCCCAAGGGCGTCAAGACCGACTGGATCATGCACGA
GTACCGCCTCACCGCAGCCGACAACCGGACCACCAAGCGCAGAGGATCCTCCATGAGGGTGAGGACTTTTTTTTC--C-T
CGCTTATTTATCTATTTATTATCTACTCCTATACTGTATTGTCTTCACTTTGGTAAAAGCAGTTGCTTGTACCATAAG--
-CTACAACTTACTCAACTTAATTGTCTGCATTTGAAATGTTTGTTTTGTGAGTGAATTAATTTTGGGGTTCTCCTTTGTT
TTTTGTTGATGCAGCTGGATGACTGGGTGCTGTGTAGGATCCACAAGAAGTGCGGCAACTTGCCCAACTTCTCCTCCTCT
GACCAGGAACAGGAGCATGAGCAGGAGAGCT---CCACCGTGGAGGACTCGCAGAACAACCACACCGTGTCGTCGCCCAA
GTCCGAGGCCTTCGACGGCGACGGCGACGACCACCTCCAGTTGCAGCAGTTCCGCCCCATGGCGATCGCCAAGTCGTGCT
CCCTCACCGACCTGCTCAACACCGTCGACTACGCCGCGCTCTCGCACCTCCTCCTCGACGGCGCCGGCGCC------TCG
TCGTCGGACGCCGGAGCAGACTACCAGCTGCCTCCCGAAAACCCACTCATCTACTCGCAGCCTCCATGGCAACAAACGCT
ACACTATAATAACAA---CAACGGCTACGTGAACAACGAGACCATCGACGTGCCTCAGCTACCCGAGGCGCGCGTAGATG
ACTACGGCATGAATGGCGATAAGTATAACGGCATGAAGAGGAAGAGATCCAGCGGCAGCTTGTACTGCAGCCAGCTGCAG
CTCCCAGCGGATCAGTACAGCGGCATGCTGATCCATCCGTTCCTCAGCCAGCAGCTGCACATGTGAAGAACCAGAGAGCT
TGGATCGAAGAGATCATCATTGTTCCATTTGAACTTGCTGTAGATCGAGAGGATCCCCCGCTGTGGCAGATAGGCAGGGA
TCTAGCTAGCTTGCTGTGTCGTGAACGACCGACCGATAAGAACGGACAAATTTCAGAATTCTTGGTGTAGCAC-AAAGCT
GTAAATTACGGGGGTTTATTGTGAAATAAATTAATCCAGTATTATTACAAGATACTCCTATATGTGATGATCATCATATA
TATGCTAGGCTTCTTAATTAGTTAATTCGAGAACGTAAAACCAACGACGCATCCATTCCATGGTTGACACACGCAGCCAG
ACTTGTTAATTAACTGCTGGCGTACCCAGCACTAGTTAATTAGCGAGGCTTTGTTGCTAGCGTGTGCGGTCTGAACCCTT
CCCTTGTCCACCGTACAATCAGGAGCAATTAAGTAACGCTCGCTCGAATGATCTATACTAGCATTTGTCACCGGAAACCA
AAGCCCGAATCAAAGACACAGCATTTAACTAAGGCTCCAGGGCCAATAGAATGGCAAAACGTCAGCTCGCAGGAACCATC
CAGGCGTGG-ATTAAAATTGTCGCAGGCCGGACAGATGCAGAAGGCGGCGGCACACGCCGCTCAACTGCTGCCGAGCTTA
CTTTAGTTGCCGTGCATGCTGGTATATATCACACGTTGCGAATTATAGATAGGCTCGAAGCT-GAATCTTCCATCCTCCT
CCATTAGGTTAATTAATTAATTAATTAACAGCGTCTCCCTATTGGAGACAGAGA------TTTGTTTATGCTTCCGGCCC
TTTCGAACCATCGTGTACCC-----AGCC-AAGAAGATAATGCAGAGTAATTAATTGGCTTATTAGCCTTTCCGATCTGG
TCTACCT-TACGGCTCTACCACCCCATGGTTGGGACTTGGAGCGATCACACCAAAGAAACTTACTAAGGCTGGTCGTAAT
GGTAGTATCATAGCTAGTATCATGCATGCCAACTAGGCAATTTTGATGAGGTGTCATAGCATTAAATGAAGAAAGAAAGG
GTGTAGTATCATATCATGATACCGTATCATATTAAATGCTATGCTACTTTGTGTCATGCATGGCAATAAATATAGTACTA
CATGATACTAATATATGATACTATGCATTAAGGAGGTAGTATCATACACTAGTATCATATGCATGATACTAGTATATGAT
ACTCCCCATTACAACCAGCCTAATTCGCAGCGGAAGCATCAAGTCCCACATGCTTACGGGGACTTGTTACAGT-------
TACTTATACACTAGTTTAGTCGCCGGATAGCCTAACCGCACGCGCGATTAAAAGGTGACGGTGACTGCTGAGGGTGGTTA
AGATAAGAATGGTCCGTCCTAATCAGGCTTC------GGCTTAGCGAAGTCATGACGATGATGCCCTAAGCATCGGTTAT
GATAGATTATCTCTAAGCAGGCATGCATGCATGCTTGCTTGCGAAAAGCTAGT
>SNPs
------------------S------S---S--S-----------------------------------------------
----S---------------------------------------------------------------------------
-S------------------------------------S----------S--------------------------S---
-----------S--------------------------------------------------------------------
------S----S----------S--------------S------------------------------------------
-----------S-S---------------------------SS----SS-SS-SSSSSSS-SSSSSSS-SSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSS-------------S--S--------------------------------------
------------------S------------------------------S--------------S---------------
------------------S-----------------S-------------------------S-------S---------
SS-S---------------------------------SSSS---------------------------------------
-----SSS-----------S------------------------------------------------------------
----------------------------------S--S---------------------------SSS------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------S--
---SSSSSSSSS-S-------------S-----S-----S---------S-----SSSSSSSS----S------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------S------S----------------------------------------------
---------------------------------------------------------------------------SS---
------------------------------------------------------------------------------SS
S---------------------------------------------------S---------S---S-------------
--------SS-------------------------------------------SS--------S----------------
-----------------S-------------SSS-------------------S--------------------------
------------------------------------S-------------------------------------------
-----------------------------------------------------------------------SSSSSS---
--------------------------------------------S-----------------------------------
---------------SSS---S-------------S----------------------S----------S----------
-------------------------S--------------------S-----------S---------------------
--------------------------------------------------------------------------------
------------------S-------------------------------S----S----S-------------------
----------------S---------SS--S-------------------------------------------------
-------------------------------------------S----------------S-------------------
-------------S--S-----------S----------------------------------S----------------
------------------------------------------S-------------------------------------
----------------------------------------------------------------S---------------
--------------S-----------------------S--------S---S-------------------------S--
---------S----------------------------------------------------------------------
S------------------------------------------------------S------S-----------------
-----------------------------------------------------S--------------------------
-----------------------------S-------------------S------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------S---------------------------------------------------S---SSS------------
----------------------------------S---------------------------------------------
-----------------------------------------------------
>forward_633
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------CAATGCCCCTCCATGAACCT-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>reverse_2365
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------GCTCATCTACTCGCAGCCTC----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>forward_642
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------TCCATGAACCTATTGGCC
CG------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>reverse_2422
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------TGGCTACGTGAACATCGACA---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>forward_2098
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------CT
GACCAGGAACAGGAGCAC--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>reverse_3105
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------CTGTCACCGGAAACCA
AAGC----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
