>input_sequence_43946
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----------------------------------------------------------------------------ATGG
GGAGAGCGCCGTGCTGCGAGAAGGACGGTCTGAAGCGGGGCGCGTGGAGCCCCGGGGAGGACCAGCGGCTGGCCGACTAC
ATCGCGCGGCATGGCCACCCCAACTGGCGCGCCCTCCCCAAGCACGCAGGTGAGTTTCGCATCTTGCTGAGGCCGACGAT
GGACTCCCTCTCTCGGGGTCTGTGATTACCACCGATGAGCGACGGACCCCTGGTATCATTGCTGGTGTTGCTGCAGGGCT
TCTGCTGTGCGGGAAGAGTTGTCGCCTGCGGTGGGTCAACTACCTCAGCCCTGACATCAAGCGGGGCAACTTCACCGCCG
ACGAGGAGGACCTCATCATCCGCCTCCATCAGGCCCTCGGCAACAGGTAGAATAATCTCTCTTTTTTCTTCATTTTTATC
CTTTTTGCGAAAAAA-TCATTTTTATCTACATAATAAAACCGTGAAATATCATTACCTTTTTTTGAGAAAAATGAAATAT
TATTAATTGTACT-CCATATATTGCCTTCATGTTTATCCAAATTTATTACTAATTGTACTCCAT------------AAAT
TGC----TATGAACATTTAACTGTCTTGCCAGCCTACAAATTGTTGTGGGCCTAGTCAGTAAAAGATGCATCATCTTTCT
GAAATTTCAGGTACGGTCCTATCATTTGATTGGTGACGGCCATAGCCTCCTCGGGACAATACTCCAAAGAAGACAAAAGC
GTTCGCGATTACTTTAAAACTCAACTTAAGATCAATCTTTTTTTCTCAAAGCCCCCACATGCAAGTAAACCAATCCAAAG
CTCGAAAGCCGCCATAGATTCCATCTCGTTTGGCCTATAACGGCGGCCAGTGGAGTGGCTGATGCATATCAACACCGGTG
CATTTTCATATAGATGCAGCAGCGGCAGCGGCAGCAGCATCACCATCTCCCGGCCACCACTTCTGCTGGACCACACTGTG
TCCAAGAGTCCAGGCTACTCCTGAGCGCCTCCATTAATCCTTATTGAATCGCACATGATCGATCAGTACCCCAGTTGCCG
AATTCAAGAGCATTTGTAAATTACTAAGTATCACAAGTAGGAGGAGGAGGGGGAGAAGTCGTGCTTCAGATTAAACCATC
TCTACGCTTTTTCGCGCAAAAAAAAAACATCTCTACCCTGTGCATTCGGAATCAAATCTTTGAAGTATCTGAGGCCTGCA
TGCAGTTGATGATGATTTTTTTAAACAGTTGCAGCTCTGAATTTG---TTTTTTCAACAGGTGGTCCGTGATAGCTGCGC
AGCTGCCGGGGCGCACTGACAACGAGATCAAGAACGTCTGGCACGCGCACCTCAAGAAGAGGCTGGAGGACGGCCTGAAG
CCAGCCGCCGATCAAGACGCCGGCGGCAGTGGCCGGAAGAAGTCACGCAAGCAGGCCAAGGCTAGGAGCGCCACCGTCGA
CGCTGGTGAGCAGTACACGTCGCCGCCAGGGCAGTCGAGCAGCGGCTTGACGTGCTCCACGGTGACCGAGTCGGCGCCGG
CGGTGTCATCCTCGCCCAGCGATAACGCCACCATCACAAGCGCGAGCCACGGCCACCAGCTCGTCAAAGAGGACACCTCC
AGCTCGGAGGCGGTCACTGACAAC---------TCTTCAACAGACGTGACGGGAATGATAGACCTCGGTGCCATGGACGA
GGATGTGAGCCTGGTGATGAGCTCATCATCGAAGTGGAGCGATGACCAGGACTTCTGGATCAAGATGCTGCAGGAGGGCG
GAGACATAATAGACTTGCCAGAGTTGTAA---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------
>chr1B_1_TraesCS1B01G172500
GTTGCATTCTCCTCTCCTGTACAATTCTTGAACCATTGTAATTTTGTCGTCTTGTTCTATTGTTGTTGTGAACCCCTCTA
GCAATTAGCTAGTAATGTTCACTCTACAATCTCATAACTTACCATACTATTTGTTGACGTCAAGAATCGTCGTAGAGTAC
CCCTCTTTTTTCTCGACATCTACCAGTTCACCTTGTTCATCCATCTCCATACCTGAGAAGTCTTTATTCTTGTAGGCTTC
TTAACGATCGGCATTCACATTGATTTAATGGTTGTGCCCTACGTAGCGCAATCACATTCATGTAATCGTGCAGTAAACCA
CGCAATTTTCACCAACATAAATCCTTACATGACCTCCGTACCTAAAAAGTCTTGTATACATAGGCTTCTTGACGATCGGC
ATTCACATTGGTTTAACGGTTGTGCCCTAT----GCAGCGGCAATCACACCTATGCAATTGCGCGAGAAACTACACAGTT
TTCATCAACAAAAATCCTTACATGACCTCCATACCTAAGAAGTCGTGTATACATAGGCTTCTTGACGATCGGCATTCACA
TTGGTCTAACGGTTGTGCCCTGTGTAGAGCCAGCCACACCCACGCAATTGCGCGGGAAACCACACGG-TTTCGGCAACGA
AAAATCCTTACACCCTAAAAGGGCCCTCCAGGAGAACTCAATTATGGAAGGAAATAAATAGTGGGCTGAATTAATTTTCA
GCCA------------------------------AAAAAACCAACGCCTTTCCCCCTCAACAAAAAAATCAAAAAA-ATT
GGCTGCTCCGCCAATAGGCCAACGAAATCGGCAACAACGAGCACACGCAGCCGCGTCCCGACGCGCTGCATCTACAGCAT
GCATCACGTTTGGCACGTTCCCGTCGCCCTTAAATACCCCACCGCGAGTGAGACCAAGCTATAGCTAATCCCCGGCCGCC
CCATCTCCTCTCACACAGGTGGCGCGCCGGCCGCCGCAGGGAGGAGGATAGGAGAACGGTGAGTTTGGATCGGTTCATGG
GGAGAGCGCCGTGCTGCGAGAAGGACGGTCTGAAGCGGGGCGCGTGGAGCCCCGGGGAGGACCAGCGGCTGGCCGACTAC
ATCGCGCGGCATGGCCACCCCAACTGGCGCGCCCTCCCCAAGCACGCAGGTGAGTTTCGCATCTTGCTGAGGCCGACGAT
GGACTCCCTCTCTCGGGGTCTGTGATTACCACCGATGAGCGACGGACCCCTGGTATCATTGCTGGTGTTGCTGCAGGGCT
TCTGCTGTGCGGGAAGAGTTGTCGCCTGCGGTGGGTCAACTACCTCAGCCCTGACATCAAGCGGGGCAACTTCACCGCCG
ACGAGGAGGACCTCATCATCCGCCTCCATCAGGCCCTCGGCAACAGGTAGAATAATCTCTCTTTTTTCTTCATTTTTATC
CTTTTTGCGAAAAAA-TCATTTTTATCTACATAATAAAACCGTGAAATATCATTACCTTTTTTTGAGAAAAATGAAATAT
TATTAATTGTACT-CCATATATTGCCTTCATGTTTATCCAAATTTATTACTAATTGTACTCCAT------------AAAT
TGC----TATGAACATTTAACTGTCTTGCCAGCCTACAAATTGTTGTGGGCCTAGTCAGTAAAAGATGCATCATCTTTCT
GAAATTTCAGGTACGGTCCTATCATTTGATTGGTGACGGCCATAGCCTCCTCGGGACAATACTCCAAAGAAGACAAAAGC
GTTCGCGATTACTTTAAAACTCAACTTAAGATCAATCTTTTTTTCTCAAAGCCCCCACATGCAAGTAAACCAATCCAAAG
CTCGAAAGCCGCCATAGATTCCATCTCGTTTGGCCTATAACGGCGGCCAGTGGAGTGGCTGATGCATATCAACACCGGTG
CATTTTCATATAGATGCAGCAGCGGCAGCGGCAGCAGCATCACCATCTCCCGGCCACCACTTCTGCTGGACCACACTGTG
TCCAAGAGTCCAGGCTACTCCTGAGCGCCTCCATTAATCCTTATTGAATCGCACATGATCGATCAGTACCCCAGTTGCCG
AATTCAAGAGCATTTGTAAATTACTAAGTATCACAAGTAGGAGGAGGAGGGGGAGAAGTCGTGCTTCAGATTAAACCATC
TCTACGCTTTTTCGCGCAAAAAAAAAACATCTCTACCCTGTGCATTCGGAATCAAATCTTTGAAGTATCTGAGGCCTGCA
TGCAGTTGATGATGATTTTTTTAAACAGTTGCAGCTCTGAATTTG---TTTTTTCAACAGGTGGTCCGTGATAGCTGCGC
AGCTGCCGGGGCGCACTGACAACGAGATCAAGAACGTCTGGCACGCGCACCTCAAGAAGAGGCTGGAGGACGGCCTGAAG
CCAGCCGCCGATCAAGACGCCGGCGGCAGTGGCCGGAAGAAGTCACGCAAGCAGGCCAAGGCTAGGAGCGCCACCGTCGA
CGCTGGTGAGCAGTACACGTCGCCGCCAGGGCAGTCGAGCAGCGGCTTGACGTGCTCCACGGTGACCGAGTCGGCGCCGG
CGGTGTCATCCTCGCCCAGCGATAACGCCACCATCACAAGCGCGAGCCACGGCCACCAGCTCGTCAAAGAGGACACCTCC
AGCTCGGAGGCGGTCACTGACAAC---------TCTTCAACAGACGTGACGGGAATGATAGACCTCGGTGCCATGGACGA
GGATGTGAGCCTGGTGATGAGCTCATCATCGAAGTGGAGCGATGACCAGGACTTCTGGATCAAGATGCTGCAGGAGGGCG
GAGACATAATAGACTTGCCAGAGTTGTAACAGTTCGAAACTAAGCTTGATTAGCTACAGTCCT-----------------
------------------------------------------------------------------GTAGTTTTTTCTCC
TCTTTTTACTCCCCATCTTCGGGTGAGAAATTGAGGTGCCCTCACCTTCTTGACGAGGGAAACAGAATCAATACCAGTCG
GCAGTCGCAACATTTAT------TTTGGTTTTTTATCTAGCATTAGAATTAATCAAATGCAGCGGTATTAGCCACAACTA
TTTGCCTATTCTTGCCTTTCTGCACTAGTTAACTAGT-------------------------------------------
--------------------------------------------------------------------------------
--ACTCTACCTCAGTCCTCCTTTACTAGTCTCCTCGTATTTTAGTCAGATTTTTATCATGATTTTAAGTACTCCTCCGTT
A-ACTTTTGTACGGCGTTTTAGACATTAGAGGGAGTAATAAATATAAGTTATATGTAGCAAAAATAATATTA--------
----------------------------------------------------------------------TTGAATCCAA
CATTGGTAGTCAAAACATTGGGTCACCTCCTAATGGAATGTGTCTACACTCACGTCACCTCGCATGAAATCCTCTCGTGG
TGCCGGATTGCCACCCTCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--------------------------------------------GCAT
GCTACTAGGCAAGCGTGGGCGCTGCCGGCTTATCTACCTTTATCCATGTAACCAGGTGTTCTTGTACTGGGGCTGAGCAA
CCCCTCCTCTGCTTGTTGTGTTTCTCTGTTGCACCTCTCAGCGTACGTAGTGTGAGATTTGCCAAGTACTTGTATTTCTA
CCCCCA
>chr1D_1
GTTGCATTCTCCTCTCCTGTACAATTCTTGAACCACTGTAGTTTTGTTGCCTTGTTCTATTGTGGTTGTGAACCCCTCTA
GCAATTAGCTAGTAATGTTCACTCTACAATCTCATAACTTACCACACTATTTGTTGATGTCGAGAATTGTTGTAGAGTAC
CCTTCTTTTTTCTTGACATCTACCAGTTCACCTTGTTCATCCATCTCCATACCTGAGAAGTCTTTATTCTTGTAGGCTTT
TTGACGATCAGCATTCACATTGATTTTATGGTTGTGCCCTAAGTA--GCAATCACATTCATGTAATCGCGTAGTAAACCA
CATAATTTTCGTCAACATAAATCCTTGCATGACCTCTATACCTAAAAAGTCTCGTATACATAGGCTTCTTGACGATCGAC
ATTCACATTGGTTTAACGGTTGTGCCCTATATATGTAGCGGCAATCACACCCATGCAATTGCGCGGGAAACCACACAGTC
TTCATCAACGAAAATTCTTTCATGACCTCCATACCTAAGAAGTCTTGTATACATAGGCTTCTTGACGATCGGCATTCACA
TTGGTCTAATGGTTATACCTTACGTGGCGCCAGTCACACCCATGCAATTGCGCGGGAAACCTAATAGTTTTTAGCAACGA
AAAATCCTTACACCCTAAAAGGGCCCTCCAGGAGAACTCAATTCTGGAAGGAAATAAATAGTTGGCTGAATTAATTTTCA
GCCA------------------------------AAAAAACCAACGCCTTTCCCCCT----AAAAAAATATAAAAATATC
GGCTGCTCCGCCAATAGGCGAACGAAATCGGCAACAACGAGCACACGCAGCCGCGTCCCGACGCGCTGCATCTACAGCAG
GCATCACGTTTGGCACGTTCCCGTCGCCCTTAAATACCCGACCGCGAGTGAGACCCCGCTACAGCTAATCCCCGGCCGCC
CCATCTCCTCTCACACAGGCGGCGCGCCGGCCGCCGCAGGTAGGAGGG-AGGAGAACGGTGAGTTTGGATCGGTTCATGG
GGAGAGCGCCGTGCTGCGAGAAGGACGGTCTGAAGCGGGGCGCGTGGAGCCCCGAGGAGGACCAGCGGCTGGCAGACTAC
ATCGCGCAGCATGGCCACTCCAACTGGCGCGCCCTCCCCAAGCACGCAGGTGAGTTCCGCATCTTGCTGACGCCGACGAT
GGACTCTCTCTCTCGGGGTCTGTGATTGCCACCGATGAGCGACGGACCCCTGGTATCATTGCTGATGTTGCTGCAGGGCT
TCTGCGGTGCGGGAAGAGCTGTCGCCTGCGGTGGGTCAACTACCTCAGCCCGGACATCAAGCGGGGCAACTTCACCGCCG
ACGAGGAGGACCGCATCATCCGCCTCCATCAGGCCCTCGGCAACAGGTAGAATAA--TCTTTTTTTTCTTCATTTTTATC
CTTTTTGCGAAAAAAATCATTTTTATCTACATAATAAAACCGTGAAATATCATTACC-TTTTTTGAGAAAAATGAAATAT
TATTAATGGTAACCCCATATATTGCCCTCATGGTTATCCAATTTGGGTCATTCCTAGTAGACATGAGCCAGCCTAGAAAT
TGCTACGTATGAACATTTAACTGTCTTGCCAGCCTACAATTTGTTGTGGGCCTAGTCAGTAAAAGATGCATCATCTTTCT
GAAATTTCAGGTACGGTCCTATCATTTGATTGGTGACGGCCAAAGCCTCCTTGGAACAATACTCCAAAGAAGACAAAAGT
GTTCGCGATTACTTTAAAACTCAACTTAAGATCAATCTTTTTTTCTCAAAGCCCCCACATGCAAGTAAACCAATCCAAAG
CTCGAAAGCCGCCATAGATTCCATCTCGTTTGGCCTTTAACGGCGGCCAGTGGAGTGGCTGATGCATATCAACACCGGTG
CATTTTCATATAGATGCAGCAGCGGCAGCGGCAGCAGCATCACCATCTCCCGGCCACCACTTCTGCTGGACCACACTCTG
TCCAAGAGTCCAGGCTACTCCTGAGCCCCTCCATTAATCCTTATTCAATCGCACATGATCGATCAGTACCCCAGTTGCTG
AGTTCAAGAGCATTTG-------------------------------------------------------TAAACCATC
TCTACGCTTTTCGAAAAAAAAAAACG------CCGCGCTGTGCATTGGGAATCAAATCTTTGAAGCATCTGAGGCTTGCA
TGCAGTTG----------TTTTAAACAGTTGCAGCTCTGACT-----TTTTTTTCAACAGGTGGTCCGTGATAGCTGCGC
AGCTGCCCGGGCGCACTGACAACGAGATCAAGAACGTCTGGCACTCGCACCTCAAGAAGAGGCTGGAGGACGGCCTGAAG
CCAGCCGCCGATCACGACGCCGGCGGCAGTGGCCGGCAGAAGTCACGCAAGCAGGCCAAGGCTAGGAGCGCCACGGTCGA
CGCTCGTGAGCGGCACACGTCGCTGCAGGGGCAGTCGAGCAGCGGCTTGACGTGCTCAACGGTGACCGAGTCGGCGGCGG
CGGTGACATCCTCGCCGAGCGATAACGCCACCATCACAAGCGCGAGCCACGGCCACCAGCTCGTCAAAGAGGACACCTTC
AGCTCGGAGGCGGTCACTGACAACAGCTTCTTGTCTTCAACAGACGTGACGGGAATGATAGACCTCGGTGCCATGGGCGA
GGACCTGAGCCTGGTGATGAGCTCATCATCGACGTGGAGCGATGACCAGGACTTCTGGATCAACATGCTGCAGGAGGGCG
GAGACATAATAGACTTGCCAAAGTTGTAACAGTTGGAAATTAAGTTTGATTAGCTACAGTACT-----------------
------------------------------------------------------------------GTAGTTTTTTCTCC
TCTTTTTACTCTCCATCTTCGGGTGAGAAATTGAGGTGCCTTCACCTTCTTGACGAGGGAAAAAGAATCAATACCAGTCG
GCAGTCGCAACACAACATTTTTGTTTTGTTTTTTATCTAGCATAAGAATTAATCGGATGCAGCGGTATTAGCCACAACTA
TTTGCCAATTTTTGCCTTTCTGCACTAGTTAACTAGC-------------------------------------------
--------------------------------------------------------------------------------
--ACT--ACCTCAGTCCTCCTTTACTAGTCTCCTCGTATTTTAGTCAGC-TTTGATCATGATTTTAA-------------
----------------------------------GTAATAAATATAAGTTATACTCACTCGGTTCCGAATTACTTGTCGC
ACGTATGGATATATCTAGATGTATTTTAGTTCTAAATACATCCATTTCAGTGACGAGTAATTCGGGACGGTTGAATCCAA
CATTGGTAGTCAAAACATTGGGTCACCTC---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------
>chr1A_1
GTTGCATTCTCCTCTCCTGTACAATTCATGAACCATTGTAGTTTTGTTGTCTTGTTCTATTGTTGTTGTGAACCCCTCTA
GCAATTAGCTAGTAATGTTCACTCTACAATCTCATAACTTACCACACTATTTGTTGACGTTGAGAATCGTCGTAGAGTAT
CCCTCTTTTTTCTCGACATCTACCACTTCACCTTGTTCATCCATCTCCATACCTGAGAAGTCTTTATTCTTGTAGGCTTC
TTGACGATCGGCATTCACATTGATTTAATGGTTGTGCTCTATATAGCGCAATCACATTCATGTAATCGCGCAACAAACCA
CACAATTTTCATCAACATAGATCCTTACATGACCTCTATATCTAAAAAGTCTTGTATACATAGGCTTCTTGACGATCGGC
TTTCACATTGGTTTAACGGTTGTGTCCTAT----GTAGCGGCAATCACACCCATGCAATTGCGCGGGAAACCACACAGTT
TTCATCAACAAAAAGCATTGCATGACCTCCATGCCGAAGAAGTCTTGTATACATAGGCTTCTTGACGATCG-CATTCACA
TTGGTCTAACGGTTGTGCCCTACATAACGCCAGTCACACCCATGCAATTGCGCGGGAAACCACACAGTTTTCAGCAACGG
AAAATCCTTAAATCCTAAAAGGGCCCTCCAGGAGAACTCAATTATGGAAAGAAATAAATACTTGGCTGAATTAATTTTCA
GCCATCCCACAAAAAAAGAATTAATTTTCAGCCAAAGAAAACAACGCCTTCCCCCCT----AAAAAAAATTAAAAA-ATC
GGCTGCTCCGCTAATAGGCGAACGAAATCGGCAACAACGAGCACACGCAGCCGCGTCCCGACGCGCTGCATCTCCAGCAG
GCATCACGTTTGACACGTTCCCGTCGCTCTTAAATACCCCGCCGCGAGTGACATCCCGCTATAGCTAATCCCCGGCCGTC
CCATCTCCTCTCACACAGGCGGCGCGCCGGCCGCCGCAGGGAGGAGGATAGGAGGACGGTGAGTTTGGATCGGTTCATGG
GGAGAGCGCCGTGCTGCGAGAAGGACGGTCTGAAGCGGGGCGCGTGGAGCCCCGAGGAGGACCAGCGGCTGGCCGACTAC
ATCGCTCGGCATGGCCACCCCAACTGGCGCGCCCTCCCCAAGCACGCAGGTGAGTTCCGCATCTTGCTGACGGCGACGAC
GGATTCCCTCTT--GGGGTCGGTGATTACCGCCGATTAC--------------TATCATTGTTGGTGTTGCTGCAGGGCT
TCTGCGGTGCGGGAAGAGCTGTCGCCTGCGGTGGGTCAACTACCTCAGCCCGGACATCAAGCGGGGCAACTTCACCGCCG
ACGAGGAGGACCTCATCATCCGCCTCCATCAGACCCTCGGCAACCGGTTGAATAA--TCTCTTTTTTTTTCATTTTTATC
CTTTTTGCG-AAAAAATCATTTTTATCTACATAATAAAACCGTGAAATATCATTACC-TTTTTTGAGAAAAATGAAATAT
TATTAATTGTACT-CCATACATTGCCTTCATGGTTATCCAATTTGGGTCATTCCTAGTAGACCTGAGCCAGCCTAGAAAT
TGC----TATAAACATTTAACTGTCTTGCCAGCGTACAACTTGTTGTGGGCCTAGTCAGTAAAAGATGCATCATCTTTCT
GAAATTTCAGGTACGGTCCTATCATTTGATTGGTGACGGCCATAGCCTCATCGGAGCAATACTCCAAAGAAGACAAAAGC
GTTCACGATTACTTTAAAACTCAACTTAAGATCAATCTTTTTTTCTCAAAGCCCCCACATGCAAGTAAACCAATCCAAAG
CTCGAAAGCCGCCATAGATTCCATCTCGTTTGGCCTTTAACGGTGGCCAGTGGAGTGGCTGATGCATATCAACACCGGTG
TATTTTCATATAGATGCAGCAGCGGCAGCGGCAGCGGCAGCACCATCTCCCGGCCACCACTTCTGCTGGACCACACTCTG
TCCAAGAGTCCAGGCTACTCCTGAGCCCCTCCATTAATCCTTATTCAATCGCACATGATCGATCAGTACCCCAGTTGCTG
AATTCAAGAGCATTTGTAAATTACATGTAGGAGGA----------------GGAGAAGTTGTGCTTCAGATTAAACCATC
TCTACGCTTTTCGAAAGGAAAAAAAAACATCTCCGCGCTGTGCATTGGGAATCAAATCTTTGAAGTATCTGAGGCTTGCA
TGCAGTTGATGAAGA-TTTTTTAAACAGTTGCAGCTCTGAATTTTAATTTTTTTCAACAGGTGGTCCGTGATAGCTGCGC
AGCTGCCCGGGCGCACTGACAACGAGATCAAGAACGTCTGGCACTCGCACCTCAAGAAGAGGCTGGAGGACGGCCTGAAG
CCAGCCGCCGATCACGACGCCGGCGGCAGTGGCCGGCAGAAGTCACGCAAGCAGGCCAAGGCTAGGAGCGCCACCGTCGA
CGCTCGTAAGCGGCAGACGTCGCCGCAGGGGCAGTCGAGCAGCAGCTTGACGTGCTCCACGGTGACCGAGTCGGCGGCGG
CGGTGTCATCCTCGCCGAGCGATAACGCCACCATCACAGGAGCGAGCCACGGCCACCAGCTCGTGAAAGAGGACACCTCC
AGCTCGGAGGCGGTCACTGACAACAGCTTCTTGTCTTCAACAGACGTGACGGGAATGATAGACCTCGGTGCCACGGACGA
GGATCTGAGCCTGGCGATGAGCTCATCATTGAACTGGAGCGATGACCAGGACTTCTGGATCAAGATGCTGCAGGAGGGCG
GAGACATAATAGACTTGCCAGAGTTGTAACAGTTGGAAATTAAGCTTGATTAGCTACAGTACTGTACTCCCTCCGTAAAC
TAATATAAGAGCGTTTAGCTTACTAAAGTAGTGTTCTAAACGCTCTTATATTAGTTTACAGAGGGAGTAGTTTTTTCTCC
TCTTTTTACCTCCCTTCTTCGGGTGAGAAATCGAGGCGCCTTCACCTTCTTGACGAGGGAAACAGAATCAATACCAGTCG
GCAGTCGCAACCATT-------------TTTTTTATCTACCATAAGAATAAATCAGATGCAGCGGTATTACCCACAACTA
TTTGCCAATTCTTGCCTTTCTGCACTAGTTAACTAGTACTCCCTCCATCCGAAAATACTTGTCATCAAAATGAATAAAAA
GATATGTATGTAGAACTAAAATACATCTAGATACATCCCCTTTTATTCATTTTAATGACAAGTATTTTCGGACGGAGAAA
GTACT--ACCTCAGTCCTCCTTTATTAGTCTCCTCATATTTTAGTCAGATTTTGATCATGATTTTAAGTACTTCCTCCGT
TCACTTTTGTACGATGTTTTAGACATTAGAGGGAGTAATAAACATAAGTTATATGTAACAAAAATAATATTA--------
----------------------------------------------------------------------TTGAATCCAA
CATTGGTAGTCAAAGCATTGGGTAACCTCCTAGTGGAATGCGTCTACACTCGCATCACTTGGCATGAAATCGTCTCGTGN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCTTCTTCGACTGGCTC
GCGGCTACAATGGAGGCACTACCCCCTTCTGCGAGCAAGGGCATAGATTATTTCGCCATCCTCACCGCCTGGTGCCTTTG
AAGGCATCGCAACGCGATCATCTTTGAAAACTTAAACCCCTCCATCCCCCTGCTTGTGAGGACGATCAAAGATGAGGCAT
GCTACTGGGCGAACGTGGGCATCGCCGGCTTATCTACCTTTATCCATGTAACCTAGTGTTCATGTACTGGGGCTGAGCAA
CACTTCCTCTGCTCGTTGCGTTTCTCTGTTGCATCTCTCAGTGTACGTAGTGTGAGATTTGCCAAGTACTTGTATTTCTA
CCCCCA
>SNPs
----------------------------------------S------S--------------------------------
--------------------------------------------S----------------S------------------
--------------------------------------------------------------------------------
--S--------------------------------------S--------------------------S-----------
-S---------S------------------------SS------------------------------------------
-----------------------------------S---------------S-------------S-----S--------
-------------------S------------------------S-----------------------------------
---------------------SS----S-----S--------S----------------------S------S-------
--------------------------------------------------------------S-----------------
---------------------------------------------------------SSSS--------SS--------S
-------------------S-----------------------------------------------------------S
-------------------------------------------------------SS-----------------------
-------------------S------------------------------------------------------------
------------------------------------------------------S-------------------------
--------------------------------------------------------S-------------S---------
--------------------------------------------------------------------------------
-----S------------S--------------------------------S----------------------------
-------------------------------------------------------SS-----------------------
---------------------------------------------------------S----------------------
--------------------------------S--------S--SSS-SS-SSS-SSSSSS-------------------
---------------------------------------S----------------------------------------
------------------------------------------------------S-------------------------
--------------------------------------------------------------------------------
------------------------------------S-------------------------------------------
-----------------------------------------------------------------------------S--
--------------------------S------------------S--------------------------------S-
------------------------SSSSSSSSSS-SSSSSSSSSSSSSSSS--------S--------------------
-----------SSSSSS----------------SS-S---------S----------------------------S----
------------S--S----------------------------S-----------------------------------
-------S------------------------------------S-----------------------------------
--------------S---------------------S-------------------------------------------
----S------S-S------------SS------------------------------------------------S---
----------------S---------------------------------------------------------------
--------------------------------------------------------------------------------
----S---------------------------------------------------------------------------
----------------------------------S----S--------------------S-------------------
--------------------------------------------------------------------------------
----------------------------------------S---------------------------------------
------------S--SS---------S----------------S-----------S------------------------
------S-------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----SS----------------------------------------------S------------------S-SS-SS-
S------------SS------------------------------------------S----------------------
--------------------------------------------------------------------------------
--------------------------------S-------S----------S-S----S-S----------S-------S
SSSSSSSSSSSSSSSSSSSSS-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------SSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------------------------------
------S---S-S-------SSS------------------------------SS------S------------------
-S-S---------S----S--------------S-------S--------------------------------------
------
>forward_583
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---GTCTAACGGTTGTGCCCTGT---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------
>reverse_2118
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------TAGGAGGAGGAGGGGGAGAA-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
>forward_1998
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------ACTTCTGCTGGACCACACTG--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
>reverse_4021
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------GCTGCCGGCTTATCTACCTT----------------------------------------
--------------------------------------------------------------------------------
------
