>input_sequence_43924
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---------------------ATGGCTCAAGCTTGCCTGCCACCTGGCTTTCGTTTCCATCCAACTGATGTTGAGCTTGT
TTCTTACTACTTGAAAAGGAAGATTATGGGGAAGAAACTTTTTGTTGAAGCTATTTCAGAGGTTGAGCTGTACAAATTTG
CTCCTTGGGACCTTCCTGGTAATTTTCCTCTATTGTTTTGATTTTTCTTGATGTAAGAATTGCACGCAAACGAGTTGGAA
ACTAATCTAGAATTTTTCAAATGCTTCCACTTTAGTTGAGTTTAGCTCTTACTTTTGTTGCAACCTTGTATATTTCCGTG
CAGATAAATCC-------TGTCTCCAGAGCAAAGATCTTGAGTGGTTCTTCTTTTGTCCCCGTGACAAAAAATATCCTAA
AGGGTCTAGGACGAACCGTGCCACACCAAATGGTTATTGGAAAACAAGTGGAAAAGACAGAACAATTGAGCTGAACTCTC
GCATTGTTGGGTTGAAGAAAACATTGATTTTTCATGAAGGCAAGGCACCCAAAGGCAATAGGACTGACTGGGTGATGTAT
GAATACAAAATGGAAGATGAAACTTTGGTGTCTGCTGGTTTCTCTAAGGTACCAATAACTCTTATCTAATGTTTTTGTTT
GTTTCACTTTATGTTAAATATGTTCAGTACAGTATATGAAAGATTCTACCATACTGGAATATGTTTTGAGGCATGCTCTT
TTGCTTGTGCCTGAAATTGTGCGTGGTAAGTTAGCCTTTATATTTAGTTAGAAAGTTGTGATCCTAGTATTTCTTTTAAA
TTCTCTGCAAGTTTATTTAAATGTATTTGTTGTTTGTTTGTTTCAGGATGCTTATGTACTCTGCAAGATATTTAAAAAGA
GTGGGCTTGGCCCAAGGATCGGCGAGCAATATGGGGCTCCTTTTGATGAAAATGAATGGGAGAATTTAGATGTTGGATCT
TCTATCTTCTCTTTTGCACCGTCGTCAGGTGTAGAGGATCCACAGGTTGAAAGTTCTGCCTTGGCTACTGCCATAGTTAT
GCAGGAACCATCCGCTCCTCAGCAGTCTGTTCAATTTTCTGAACATGTTAATATCTGTTCTGATGAGGTCAATGACGCGC
CTCCTGAAATTGATGGAATATTGTTGGACGAACTGGCAAAGTTTTTGGATGATTCTCCGAACGATGATGTAGTTTTGCCA
GAGGTATTGGCTTGCTGACTTCTTGCTTAACATGGTCTGTTTGCTTGTACCCAAGGAATTACAAATTATATACTAACCTT
TATACATCTTAC-----AGAATTCTGGTCTCCCTCCAATGTCTGAGCTTGAGGCTCAAGCTTTTGAGATAAATACTGCTG
AGCTCTATGACCAATTGGCAGGACTTTCCCAGTCAGGAGATATGTCTACTGTAAATTTCCCTGCTAGCAACGGGGATGTT
ATTGAAAACAATTTGCAGCAAGCAAACTCTGGACTTGCTATGGATGATGATTATATAGGGCTGGATGATCTGCTTGCTCC
TGGGGAAACCTTCTCCTATGATTTTTCTGGTGAAACCTTTTCCTATGATCTGCCTGGTGGAAGCTTCTCCTATGATTTGT
CTGTGCCAAACAATCAGTTTTTGCTGTACCCACTTGATCAATCAACTAGTGGCAGTCACTACGGTGTTGGTGCTACTCAA
TCAACTTTCGAAGCAAGTGGAACTCTTCCACCAATGCAACCAATGCCAAGCACTTTTAATGACATGCCTTCTGTTTCCAA
T------------------TGCTTGAACCCAGCCATGAAAGACCCATTCTCTTAG-------------------------
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------------------------
>chr1D_1_TraesCS1D01G266500
CAAGTCCTGTATGATCCTTTTTGCAGTTTTCTTTTTGTTGAAAGATCCTGTAGTTTTTTCTT-----ACATCAGAGCCTA
TGAAATATATACTAAAATTCTCTCTGTTTCCAACCCAAAGCCACGTTGTAGGTTAG----ATTCACCTTGTTAATGTGC-
--TATTTCACTGTGAGATGTGTACAATGTAAAATTCACTT--TATATATGCAATCTTTTCTTTGCTTCCTAGTACTTCTG
TTATTTGGATGGGAAGATTCACCTTGTTGATCTGGATAAAACATAGAACAATATGTATTCTGTATATTCTTCTACTGTT-
-TATGTTTTTCCCTGCTGATGATGATTTCTAATCTCATGCAGGTTTTTGATCTCAGTCACTCATGTCTTTTGAAGTCAGC
GAGGG---ATCCCCTTATTTCCTCTCGTGCTACTTCTGGTTCATATATTGCATAAAATTCCGGGACTTCACTTGATACAA
GTGGATCATCTGGAG-------------------------------TTTTGTGCGAATACTTCCTATCATGTGAATCAGT
GGTAGTTGGTTTAATTGGCAAGACTCAAACTTCTCTC--ATCTGAGTTCAGAAACATTTGTTGCTTGAGTCTTTGGTGTA
CTGCTTTCCTTGAGTCTTGCCAAGCCTGGTTTCCCATCAGTTGTTTCTCCTCCAGCTTTCGGTTGGACCATTCTCTCTTC
TGGTCTAATCTCATCAATCTTTTGATCCTCCCTTCAGAATAGTTGTT-TAACGTGAGC-TGTCCTACTCTGCTCACACTG
CAATCTTCTGAAGCTCTCTTCTCTGGTTCTTGTCTGTTCTCCAAGCATTTGAGAGCTCCTCTCTCCTTAAGTTTGGTTGA
TCTGTGGCCCTGAATTCTGTCCTTTCAGGGCTAAAGCATATCCCTTTCT------GGCCAGACTTGATATTTCCCTGATT
-ACTGGTATTGTTAATTGCCTAATCTGGTGAACCATTTCTGGTTGTGTTTCACCTCTTGTGTTCTTCTCTTGATACTGAG
CACAAGAGACCCACTGCAGTGATGGCTCAAGCTTGCCTGCCACCTGGCTTTCGTTTCCATCCAACTGATGTTGAGCTTGT
TTCTTACTACTTGAAAAGGAAGATTATGGGGAAGAAACTTTTTGTTGAAGCTATTTCAGAGGTTGAGCTGTACAAATTTG
CTCCTTGGGACCTTCCTGGTAATTTTCCTCTATTGTTTTGATTTTTCTTGATGTAAGAATTGCACGCAAACGAGTTGGAA
ACTAATCTAGAATTTTTCAAATGCTTCCACTTTAGTTGAGTTTAGCTCTTACTTTTGTTGCAACCTTGTATATTTCCGTG
CAGATAAATCC-------TGTCTCCAGAGCAAAGATCTTGAGTGGTTCTTCTTTTGTCCCCGTGACAAAAAATATCCTAA
AGGGTCTAGGACGAACCGTGCCACACCAAATGGTTATTGGAAAACAAGTGGAAAAGACAGAACAATTGAGCTGAACTCTC
GCATTGTTGGGTTGAAGAAAACATTGATTTTTCATGAAGGCAAGGCACCCAAAGGCAATAGGACTGACTGGGTGATGTAT
GAATACAAAATGGAAGATGAAACTTTGGTGTCTGCTGGTTTCTCTAAGGTACCAATAACTCTTATCTAATGTTTTTGTTT
GTTTCACTTTATGTTAAATATGTTCAGTACAGTATATGAAAGATTCTACCATACTGGAATATGTTTTGAGGCATGCTCTT
TTGCTTGTGCCTGAAATTGTGCGTGGTAAGTTAGCCTTTATATTTAGTTAGAAAGTTGTGATCCTAGTATTTCTTTTAAA
TTCTCTGCAAGTTTATTTAAATGTATTTGTTGTTTGTTTGTTTCAGGATGCTTATGTACTCTGCAAGATATTTAAAAAGA
GTGGGCTTGGCCCAAGGATCGGCGAGCAATATGGGGCTCCTTTTGATGAAAATGAATGGGAGAATTTAGATGTTGGATCT
TCTATCTTCTCTTTTGCACCGTCGTCAGGTGTAGAGGATCCACAGGTTGAAAGTTCTGCCTTGGCTACTGCCATAGTTAT
GCAGGAACCATCCGCTCCTCAGCAGTCTGTTCAATTTTCTGAACATGTTAATATCTGTTCTGATGAGGTCAATGACGCGC
CTCCTGAAATTGATGGAATATTGTTGGACGAACTGGCAAAGTTTTTGGATGATTCTCCGAACGATGATGTAGTTTTGCCA
GAGGTATTGGCTTGCTGACTTCTTGCTTAACATGGTCTGTTTGCTTGTACCCAAGGAATTACAAATTATATACTAACCTT
TATACATCTTAC-----AGAATTCTGGTCTCCCTCCAATGTCTGAGCTTGAGGCTCAAGCTTTTGAGATAAATACTGCTG
AGCTCTATGACCAATTGGCAGGACTTTCCCAGTCAGGAGATATGTCTACTGTAAATTTCCCTGCTAGCAACGGGGATGTT
ATTGAAAACAATTTGCAGCAAGCAAACTCTGGACTTGCTATGGATGATGATTATATAGGGCTGGATGATCTGCTTGCTCC
TGGGGAAACCTTCTCCTATGATTTTTCTGGTGAAACCTTTTCCTATGATCTGCCTGGTGGAAGCTTCTCCTATGATTTGT
CTGTGCCAAACAATCAGTTTTTGCTGTACCCACTTGATCAATCAACTAGTGGCAGTCACTACGGTGTTGGTGCTACTCAA
TCAACTTTCGAAGCAAGTGGAACTCTTCCACCAATGCAACCAATGCCAAGCACTTTTAATGACATGCCTTCTGTTTCCAA
T------------------TGCTTGAACCCAGCCATGAAAGACCCATTCTCTTAGACAGCAACTTTTGAGGTAT-AAGTC
TGTTATCTTTGTGGTCATTGGTGCTGGAAGATGCTGCCGTTTCTGG-TTTGGTTGCCCATCATTGTCTGATGAGGCTCTT
GGTGGATCTTGGATGTTGGTCCCTGCTGTAGATGGTCCAACAATGGTGTTTGTATCATGGCATGGCTGCTGCTCAATTGA
AGAAGCCGGAACTTGGTTGTGTCTTTGATCACGAGCACAATACTGGACAAGTGACCGAGCTTAGCTTACTGCTTTACCGC
GGAGGAACTG-TTTCTGCTGGTTTGGAAGATGTCTTATCTGGGTGGGGATGCTGCAGTCCACCGTAGTTCTTTCTGTAAT
AACTGCCATGTTAGATGCCGAGTTGTCCATAAACCTAATGACAACTTCGTAGCTTAAGTCGCATCTTCTATCTATTTTCT
GCCAATT------TACTGTATTTGAACCATCGTCATTATTATTATTATTGTAATCGTGCCCAATACCGTGTTTATGTTCT
TGTCGACGCAATGTTTCTTCCTTTTTTTTCGATATATATGCCTTTTTTTGTTCTTGCGCGTGATGTCTTAAAGGTGCTTG
GTGATATATGCTTTTTCCATTGCCCCTACAGTGGCATATGAAATGGACGAAGAAATTTTAAACACTTCCTATCAGAAACT
GGCAAAGAGGCACTCCTCAGCCCATGTGAGAGACCGCGTTTGCTCCCCATGGATTCTTTCTCCCGATTTGGATTTGAACT
GATAATTTATTTCCTATGTGGATTTGTACTGTTCGTGCGTGTTATTTCCTTCTCTTTACCAATGGATATGTTTTACCCGC
CGCCCTCCTTGTATTGACCATTCTATTGGAAATTTTGATTTATCGCAGAACCACTAATTCTGTGACTTGATTTTAGCGGT
CTTCCTATCTAAGAACATTTAGAATAATTCATAATGTTGGGTTTGCTTTACGAGGGTTCATAAATGTTTGATCTCTAAAC
TCTATGTGAGAGTGAGATAAATTA
>chr1B_2
-AAGTCATGTATGATCCTTTTTGCAGTTTTCCTTTTGTTGAAAGATCCTGTAGTTTTTTCTTGAGTTACATCAGAGCTTA
TGAAATATA--CTAAAATTCTCTCTATTTCCTCCTCAAAGCCACGTTGTAGGTTAGATTCATTCACCTTGTTAATGTG--
-GTATTTCACTGTGAGCTGTGAACAACGTAAAATTCACTTCCTATATATGCAATCTTTTCTTTGCTTCCTAGGACTTTAG
TTATTTGGATGGGAAGATTCACCTTGTTTATCTGGATAAAACATAGAACAATACGTATTCTGTATATTCTTCTGCTGTT-
-TAAGTTTTTCCCTTCTGATGATGATTACTAATGTCTTGCAGGTTTTTGATCTTAGTCACTCATGTCTTTTGAAGTCAGC
GAGGG---ATCCCCTTATTTCCTCTCGTGCTACTTCTGGTTCATATATTGCATAAAATTCCGGGACTTCACTTGATACAA
GTGGATCATCTGGAG-------------------------------TTTTGTGTGAATACTTCCTATCATGTGAATCAGT
GGTAGTTGGTTTAATTGGCAAGACTCAAACT--TCTC--ATCTGAGTTCAGAAACATTTGTTGCTTGAGTCTTTGGTGGA
CTGCTTTCCTTGAGTCTTGCCAAGCCTGGTTTCCCATCAGTTGTTTCTCCTCCAGCTTTCGGTTGGACCATTCTCTCTTC
TGGTCTAATCTCATCAATCTTTTGATCCTCCCTTCAGAATAGTTGTT-TAACGTGAGCTTGTCCTACTCTGCTCACACTG
CAATCTTCTGAAGCTCTCTTCTCTGGTTCTTGTCTGTTCTCCAAGCATTTGAGAGCTCCTCTCTCCTTAAGTTTGGTTGA
TCTGTGGCCCTGAATTCTGTCCTTTGAGGGCTAAAGCATATCCCTTTCT------GGCCAAACTTGATATTTCCCTGATT
-ACTGGTATTGTTAGTTGCATAATCTGCTGAAGCATTTCTTGTTGTGT-----CTCTTGTGTTCTTCTCTTGATACTGAG
CACAAGAGACCCACTGCAGTGATGGCTCAAGCTTGCCTGCCACCTGGCTTTCGTTTCCATCCAACTGATGTTGAGCTTGT
TTCTTACTACTTGAAAAGGAAGATTATGGGGAAGAAACTTTTTGTTGAAGCTATTTCAGAGGTTGAGCTGTACAAATTTG
CTCCTTGGGACCTTCCTGGTAATTTTCCTCTATTGTTTTGATTTATCTTGATGTAAGAATTGCACCCGAATGAGTTGGAA
ACTAATCTAGAATTTTTCAAATGCTTCCACTTTAGTTGAGTTTAGCTATTACTTTTGTTACAACCTTGTATGTTTCCGTG
CAGATAAATCC-------TGTCTCCAGAGCAAAGATCTTGAGTGGTTCTTCTTTTGTCCCCGTGACAAAAAATATCCTAA
AGGGTCTAGGACGAACCGTGCCACACCAAATGGTTATTGGAAAACAAGTGGAAAAGACAGAACAATTGAGCTGAACTCTC
GCATTGTTGGGTTGAAGAAAACATTGATTTTTCATGAAGGCAAGGCACCCAAAGGCAATAGGACTGATTGGGTGATGTAT
GAATACAAAATGGAAGATGAAACTTTGGTGTCTGCTGGTTTCTCCAAGGTACTTCTAACTCTTATCTAATGTTTTTGTTT
GTTTCACTTTATGTTGAATATGTTCAGTACAGTATATGAAAGATTCTACCATACTGGAATATGTTTTGAGGCATGCTCTT
TTGCTTGTGCCTGAAATTGTGCGTGATAAGTT-GCCTTTATATTTAGTTAGAAAGTTGTGATCCTAGTATTTCTTTCAAA
TTCTCTGCAAGTTTATTTAAATATATTTGTTGTTTGTTTGTTTCAGGATGCTTATGTACTCTGCAAGATATTTAAAAAGA
GTGGGCTTGGCCCAAGGATCGGCGAGCAATATGGGGCTCCTTTTGATGAAAATGAATGGGAGAATTTAGATGTTGGATCT
TCTATCTTCTCTTTTGCACCGTCCTCAGGTGTAGATGATCCACAGGTTGAAAGTTCTGCTTTGGCTACTGCCATAGTTAT
GCAGGAACCATCCGCTCCTCAGCAGTCTGTTCAATTTTCTGAACATGTTAATATCTGTTCTGATGAGGTCAATGACGTGC
CTCCTGAAATTGATGGAATATTGTTGGACGAACTGACAAAGTTTTTGGATGATTCTCCGAACCACGACGTAGTTTTTCCA
GAGGTATTGGCTTGCTGACTTCTTGCTTAACATGGTCTGTTTGCTTGTACCCAAGGAATTACAAATTATTTACTAACCTT
TATACATCTTAC-----AGAATTCTGGTCTCCCTCCAATGTCTGAGCTTGAGGCTCAAGCTTTTGAGATAAATAGTGCTG
AGCTCTATGACCAATTGGCAGGACTTACCCAGTCAGGAGATATGTCTGCTGTAAATTTCCCTGCTAGCAATGGCGATGTT
ATTGAAAACAATTTGCAGCAAACAAACTCTGCACTTGCTATGGATGATGATTATATAGGGCTGGATGATCTGCTTGCTCC
TGGGGAAACCTTCTCCTATGATTTTTCTGGTGAAACCTTTTCCTATGATCTGCCTGGTGGAAGCTTCTCCTATGATTTGT
CTGTGCCAAACAATCAGTTTTTGCAGTACCCACTTGATCAATCAACTAATGGCAGTCACTACGGTGTTGGTGCTACTCAA
TCAACTTTCGAAGCAAGTGGATCTCTTCCACCAATGCAGCCAATGCCAAGCACTTTTGATGACATGCCTTCTGTTTCCAG
ACTGCTGAATGATG-----------------------------------------------------------------C
TGTTATCTTTGTGGTCATTGGTGCTGAATGATGCTGCCGTTTCTGG-TTTGGTTGCCCATCATTGTCTGATGCGGCTCTT
GATGGATCTTGGGTGTTGGTCCCTGCTGTAGATGGTCCAACGATGGTGTTTGTATCATGGCATGGCTGCTGCTCAATTGA
AGAAGCCGGAACTT-GTTGTGTCTCTGATCACGAGCACAATACTGGACAAGTGACCGAGCTTAGCTTACTGCTTTATCGC
AGAGAAACTGTTTTCTGCTGGTTTGGAAGATGTCTTATCTGGGTGGAGATGCTGCAGTCCACCGTAGTTCAT--TGTAAT
AGCTACCATGTTAGATGCCGAGTTGTCTATAAACCTAATGACAACC---TAGCTTAAGTCGCATCTTCTATCTATTTTCT
GTTAAAAA--TAGTAATGTATTTGAACCATCGTCATTATTATAATTATTGTAATCGTG-CCAATACCGTTTATGTTTTTT
TTTTGATGCAATGTTTCCCCAATTTAGTTC--TATATATGCCTTTTTTTTTGTTCTTG----------------------
--------------------------------------------------------------------------------
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------------------------
>chr5A_111
--------------------------------------------------------------------------------
-----------------------------------CAAAGCCATGGTGTAGGTTAG----ATACACCTTGTTAATGTGCT
AGTATTTCATTGCGAGTTGTGTACACTGTAAAATCCACTTTCTTTATAGGCAATCTTTTCTTTGCTTCCTGG-ACTTTAG
TTAGTTGGATGGGAAGAT--ACCTCATTGATCTGGATAAAACATGGAACA-TATGTATTCTG--TATTTTCATTTCTTGC
ATATGTTTTTCCTTTCTGTC-ATGATTTCTAATCTCATGCAGGTTTTTGATCTGAATAACTCATGTCTTTTGAAGTCAGC
GAGGCATCATCCCCTTATTTCCTCTCATGCTACTTCTGGTTCATATATTGCATAAAATTCCG------------------
-------------AG-------------------------------TTTTGTGTGAATACTTCCTATCATGTGGATCAGT
GGTAGTTGGTTTAATTGGCAAGACTC---------TCTCATTTGAGTTCAGAAATATTTGTCGCTCGAGTCCTTGGTGTA
CTGCTTTCCTTGAGTCTTGCCAAGCTTGGTTTCCCATCAGTTGTGTCTCCTCCAGCTTTCGGTTGG--------------
------------ATCAATTTTTCGATCCTCCCTTCAGAACAGTTGTTATAACATGAGC-TGTCCTACTCTGCTCACACTG
CAATCTTCTGATGCTCTCTTCTCTGGTTCTTGCTTGTTCTC-------TTTTGAGCTCCTCTCTCCTTAAGTTTGGTTGA
TCTGTAGCCTTGA-TTCTGTCTTTTGAGGACAGAAG-------CATTCAACTTTCTGGCAAACTTAATATTTCCCTGATT
TACTGGTATTGTTAGTTGCATTATCTGGTGAAGCAATTCTGGTTGTGTTTCACCTCTTGTGTTCTTCTGTTGATACTGAG
CAAAAGAAACCCACTCCGGTGATGTCTCAAACCTGCCTGCCGCCTGGCTTTCGTTTCCATCCAACTGATGTTGAGTTTGT
TTCTTACTACTTGAAAAGGAAGATTATGGGGAAGAAACTTTTTGTCGAAGCTATCTCAGAGGTTGAGCTGTACAAATTTG
CTCCTTGGGACCTCCTGGT--AATTTCATCTATTGTTTTATTTTTTTT--ATTTAATGATTGCACCCAAATGAGTTGCAA
ATTAATCTAGAATTCTTGTAATGCTCTCTCTTTGGTTGAATTTGGTTCCTGCCTTTGTCGCGACCTTCTATGTTTCTGTG
CAGATAAATCATAAATCATGTCTCCAGAGCAAAGATCTTGAGTGGTTCTTCTTTTGCCCCCATGACAAAAAAAATCCTAA
AGGGTCTTGGACGAACCGTACCACACCGAATGGTTATTGGAAAACAAGTGGAAAAGACGGAACTATTGACCTGAACTCTC
GCATTGTTGGGTTGAAGAAAACATTGATTTTTCATGAAGGCAAGGCACCCAAAGGCAATAGGACTGATTGGGTAATGTAT
GAATACAAAATGGAAGATGAAACCTTGGTGTCTACTGGTTTCTCAAAGGTACTGCTAACTCTTATCTGATGTTTTTGTTT
GCTTCACTTTTTTGAAGTT-TGTTCACTACAGTATATGAAAGATTCTACCATACTGGAATCTGTTTTGAGGCATGCTCTT
TTGCTTGTGGCTGAAATTGTATGTGATAAGTT-GCCTTTATATTTAGTTAGAAAGTTGTGATCCTAGTATTTCTTTCAAA
TTCTCTGCCAGTTTATTCAAATATATTTGTCGTTTGTTTGTTTCAGGATGCTTATGTACTC------------------A
GTGGGCTTGGCCCAAGGATTGGTGAGCAATATAGGGCTCCTTTTGATGGAAATGAATGGGAGAATTTAGATGTTGGAACT
TATATCTTGTCTTTTGCACCATCGTCAGGTGTAGAGGATTCACAGGTCGAAAGTTCTGCCTGGGTTACTGCCATAGTTAT
TCGGGAACCATCCGCTCCTCAGCAGTCTGTTCAATTTTCTGAACATGTTAATATCTGTTCTGATGAGGT-----------
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>chr1A_122
--------------------------------------------------------------------------------
----------------------------------------------TGTAGGTTAG----ATTCATGTTGTTAATGCGCT
A---TTTCACTTTGAATTGCGTACAATGTAAAATTCACTT--GCTATATGCAGTCTTTTCTTTGCTTCCTGGGACTTTAG
TTATTTGGATCGAA-------------------GGATAAAACATAGAACA-CATGTATTCTG--TATTTTTCTGCTGTT-
-TATGTTTTTCCTTTCTGACGATGTTTTCTAATCTCATGCAGGTTTTTGATCTCAGTCACTCATGTCTTTTGAAGTCAGC
GAGGG---ATCCCCTTATTTCCACTCGTGCTACTTCTGGTTCATATATTGCATAAAATTCCG------------------
-------------AGAATTCACTTGATACAAGTGGATCATCTGGAGTTTTGTGCGAGTACTTCCTATCATGTGAATCAGT
GGTAGTTGGTTTAATTGGCAAGACTCAAACT--TCTCTCATCTGAGTTCAGAAACATTTGTCGCTTGAGTCCTTGGTGTA
CTGCTTTCCTTGAGTCTTGCCAAGCCTGGTTTTCCATAAGTTGTTTCTCCTCCAGCTTTTGGTTGGACCATTCTCTCCTC
TGGTCTAATCTCATCCATCCTTTGATCCTCCCTTCAGAATAGTTGTCATAACGTGAGC-TGTC---CTCTGCTCACACGG
CAATCTTCTGAAGCTCTCTTCTCTGGTTCTTGTTTGTTCTC-------TTGAGAGCTC--CTCTCCTTAAGTTTGGTTGA
TCTGCGGCCTTGAATTCTGTCTTTCGAGGACTGAAG-------CTTTCT------TGCCAAACTTGATATTTCCCTGATT
TACTGGTATTGTTAATTGCATAATCTGGTGAAGCAATTCTGGTTGTGTTTCACCTCTTGTGTTCTTCTGCTGATACTGAG
CGCAAGACACCCACTGCAGTGATGGCTCAAACTTGCCTGCCACCTGGCTTTCGTTTCCATCCAACTGATGTTGAGCTTGT
TTCTTACTACTTGAAAAGGAAGATTATGGGGAAGAAACTTTTTGTTGAAGCTATCTCAGAGGTTGAGCTGTACAAATTTG
CTCCTTGGGACCTTCCTGGTAATTTTCATCTATTGTTTTATTTTTTAT--ATGTAATAATTTCACCCAAATTGGTTGGAA
ATTAATCTATATTTCTCATAATGCTCTCACTTTGGTTGAATTTAGTTCTCAACTTTGTTGTGACCTTCTGTTTTTCTGTG
CAGATAAATCATGTCTT-------CAGAGCAAAGATCTTGAGTGGTTCTTCTTTTGCCCCCGTGACAAGAAGTATCCTAA
AGGGTCTAGGACGAACCGTGCCACACCAAATGGTTATTGGAAAACAAGTGGAAAAGACAGAACAATTGAGCTGAACTCTC
GCATTGTTGGGTTGAAGAAAACATTGATTTTTCATGAAGGCAAGGCACCGAAAGGCAACAGGACTGATTGGGTGATGTAT
GAATACAAAATGGAAGATGAAACTTTGGTGTCTGCTGGTTTCTCGAAGGTACTTTAAACTCTTATCTAATGTTTTTGTTT
GTTTCACTTTTTTGAAGTA-TGTTCACT---GTATATGAAAGATTCTACCATGCTGGAATATGTTTTGAGGCATGCTCTT
TTGCTTATGGCTGAAACTGAGCGTGATTAGTT-GCCTTTATATTTAGTTAGAAAGCTGTGATCCTAGTATTTCTTTCAAA
TTCTCTGCAAGCTTAATTAAATATATTTGCTGTCTGTTTGTTTCAGGATGCTTATGTACTCTGCAAGATATTTAAAAAGA
GTGGGCTTGGCCCAAGGATTGGTGAGCAATATGGGGCTCCTTTTGATGAAAACGAATGGGAGAATTTAGATGTTGGATCT
TCTATCTTCTCTTTTGCACCGTCCTCAGGTGTAGAGGATCCACAGGTCGAAAGTTCTGCCTTGGCTACTGCAATAGTTAT
TCACGAACCATCCGCTCCTCAGCAATCTGTTCAATTTTCCGAACATGTTAATATCTGTTCTGATCAGGTCAATGATGCGC
CTCCTGAAATTGATGGGATATTGTTGGACGAACTGACAAAGTTTTTGAATGATTCTCCCAACCATGACGTACGTTCGCCG
GAGGTATTAGCTTGCTGACTTCTTGCTTATCATATTCTGTATGTTTGTACCGAAGGAATTATAT-TTTTTTAATAACCTT
TTTACATCTTTTGTTGTAGAATTCTGGTCTGCCTCCAATGTCTGAGCGTGAGGCTCAAGCTTTTGAGATAAATACTGCTG
AGCTCTATGACCAATTGGCAGTACTTGCCCAGTCAGGAGATATGCCTGCTGCAAATTTCCCTGCTAGCAACGGGGATGTT
ATTGAAAACAATTTGCAGCAAACAAACTCTGGGCTTGCTATGGATGATGATTATATAGGGTTGGATGATCTGTTTGCTCC
TGGGGAAACTTTCTCCTATGATTTTTCTGGTGAAACATTCTCCTATGATTTGCCTGGTGGAACCTTCTCCT---ATTTGT
CTGTGCCAAACAATCAGTTTTCGCAGTACCCACTGGATCAATCATCTAATGGCCTTCACTACGGTGATGGTGCCACTCAA
TCAACTTTCTTAGCAAGTGGACCGCTTCCACCATTGGAACCAATGCCTAGCACTTTTGATGACATGCCTTCTGTTTCCAA
TAAGCCTGCAAGCTCCTACTGCTTGAACCCAGCCATGAAAGACCCATTCTCATAGATAGCAACTTTTGAGGTACCAAGTC
TGTTACCTTTGTGGTCATTGATGTTGGAAGTTGCTGCTGATTCTGGTTTTGGTTGTCCATCATTGTCTGATGTGACTCTT
GATGGATCTTGGATGTTGGTCCCTGCTCGAGATGACCCAACAATGGTGTTTGTATCATGGCATGGCTGCTGCTCTATTGA
AGAAGCCGGAACTTGGTTGTGTCTCA-ATCACGAGCACA-------------GACCGAGCTTAGCTTACTGCTATACCGC
GGAGAAACTGTTTTCTGCTGGTTTGGAAGATGTCTTGTCTGGGTGGAGATGCTGCAGTCCATCTT-GTTCTTTCTGTAAT
AACTGCCATGTTTGATGC---GTTGTCCATAAACCTAGTGACAACTTAATAGCTTAAGTCGCATCTTCTATCTATTTTCT
GTCAAAGTAGTACTACTGTATTTGAACCATCGTCATTAATATTATTATT-------------------------------
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>SNPs
S-----S------------------------S---------------------------------------------S--
---------SS--------------S-----SS-S---------------------------------------------
----------------S-------------------------------------------------------S----SS-
-------------------------------------------------------------------------S------
--------------S-----------------------------------------------------------------
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-------------------------------SS-----------------------------------------------
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-------------------------S----------------------------------S-------------------
-------------------S------------S-----------------------------------------------
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-----------------------------------------------------------------S----S---------
-----------------------------------------------------------------------S--------
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-------------------------------------------------------------------S------------
--------------------------------------------S-------SSS-------------------------
--------------------------------------------------------------------------------
-------------------------S------S-------------------------------------------S---
----------------------S---------------------------------------------------------
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-----------------------------------S--------------------------S----S------------
---------------------------------------------------------------------S----------
--------------------------------------------------------------------------------
--------------------------S--------------------S--------------------------------
---------------------S----------------------------------------------------------
--------------------------------------------------------------------------------
------------------------S-----------------------S-------------------------------
---------------------S-----------------------------------S----------------------
---------------------------------------------------S----S----------------S------
------------------------------------------------------------------------S-------
-S------------------------------------------------------------------------------
------------------------S-------------------------------------------------------
----S-----------------------------------------S---------------------------------
-----------------------------------------------SS-------------------------------
-S---SS---------------------------------------------------S----------S-S-S-S--S-
-S-S--S----------SS-SS---SS---SS-----------------S-SS-SSS-SSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSS
>forward_941
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----------------------------------------AGCATATCCCTTTCTGGCCAG-------------------
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>reverse_2953
--------------------------------------------------------------------------------
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------------------------------------------------------------------------AGGCTCTT
GGTGGATCTTGG--------------------------------------------------------------------
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