>input_sequence_43865
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--------------------------------------------------------------ATGGCCGGTGGTAGTTCT
GCTGCAGAAGGTGACAAGGCG---AAGGTGGTGACCATCCTGAGCATCGACGGCGGCGGCGTGAGAGGGATCATCCCGGC
CACCGTCCTCGCCTTCCTCGAAAAGGAGCTCCAGGTAAGAGACTTTGATA---TATACGTTCATCATCTATCTTGTC---
-ATCAAGTATATGTATACGCAATACACATGCTTGTGAATGGAGTATAGGAGTATATCACCGC-------ATGAGTTGTGT
GTAGAAACTGGACGGGCCGGATGCTAGGATCGCGGACTACTTCGATGTCGTCGCCGGCACGAGCACGGGCGGCCTCTTGA
CGGTGATGCTCGCGGCGCCGGACAAGGATGGGCGGCCGCTGTTCGACGCCAAGGATCTGGCCAAGTTCTACATCGACGAG
TCGCCCAAGATCTTCCCTCAGAAGTA--------ACTCACCAACTGAG-ATGCATGCATACTTTGTATATGTCGTCCATT
TCTTTGCTACACGCAAGTTCAACGTCGATTGTCATCTGGATTATTGCGTGGGAAGC---------------------TGC
AGGGGCTCCATCTTCTCCAAGATCGGCTCGGCTCTGGCTCTGGCGACGGGGCCCAAGTACGACGGCAAGTACCTCCATTC
GCTGCTCCGTCAGCACCTCGGCGACACCAAGCTGGACGGGGCTCTGACCCATGTGGTCATCCCGGCATTCGATATCGCGT
ACCTGCAACCCACCATCTTCTCCAGCTTCCAGGTATCCATCCATGTGGTGCATGCACATG------GTGAA-----C---
-TA-----------------------------------------------------------------------------
----------CCTAGTAGTAGTAGTTAAGTAATTGACTAAGCTGCTTGTG----TGCATGATTGATCAGTTGGAGAACCA
GCCCGCCAAGAACGCGCTCCTGTCGGACATCGCCATCGGCACCTCCGCCGCACCCACCTTCTTCCCGGCGCACTACTTCG
AGACCAACGACGGCAAGGGCGGCACGAGGGCCTTCAACCTCATCGACGGCGCCGTGGCCGCCAACAACCCTGTATGTTAC
CAACTAACTAATTGACCTCGCTGCCGCATTCACAAATCACAATACGTATACACAATAATCTCACTCATGGACTGCATATG
TATGTATGC---TGCAGACTCTATTGGCGATGAACCAGGTGGCGGAGCACATGGTCCTCGCCGGGCAGCAGCCGGCG---
GGCAAGTCATACATAGTCATCTCCATCGGCTGTGGGACATCATCGCTCCCAAAACTCAAGTACAGCGCCAAGGATGCCGC
CAAGTGGGGCATCTTGAGCTGGCTCATCAAGGACGGCTCCGTCCCCATCCTCGACATGTTCAACGCCGGTAGCGCCGACA
TGGTCGACTTCCACCTCTCCGTCCTCTCCGCCGTCCTCGGCTCCTCCCACCAGTACCTGCGCATCCAGGTGCTTGCACAC
CTACCCTATTACTATTGGTAGTATTATATATACTACTATTACACCAAAAACAT-AAAAAGAGGATAGTCCTTATTTTCGG
CATCGATTGATACATGTAGCCATCCATCATCTGTTGTAGTA---------------ATGACTCAACCGATGACTCAATGA
TCCATTGTA--TGCAAGTGCAGTATGATAAACTGAGCGGGAGCGCCGGCTCGATCGACGACTGCTCCAAGGCCAACTTGG
ATAAGTTGGTGAAGATTGGTGAAGAGCTGCTCAGCGAGAAGGTGTCCGGGGTGGACCTGGAGACCGGCCGGAATGTGGAG
GTGCCCGGCGGGGGCACCAACGCGGAGGAGCTAGCCAAGTATGCAAGGCAGCTCTCCGACGAGCGGCGCAGACGCCGCAA
CAATTAA-------------------------------------------------------------------------
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>chr5B_1_TraesCS5B01G529100
AGCATTTTATGGATTCCTCATAATGTATCTATCTAGTTCATACAGAGACAATACAGTTCGAATTCCTATGAGTGTGCATT
TTGACTCCCGGGTTCCCTAGAGCTTGAAA-TTTCAAAAATTATATTGTAGTTTGCAAAAAATGATAAGAATATACGTTTT
GAACTGTATTGTCTCTGTATCATATAAAGTGCGTGTTTGAAAATTTGCATGTTAAAATACGTTTTGATGTGAACCACGCA
AAAAGAACCCTTTTATA--GTGAGCAGTGCAAGTCCTAGACCATGATTTTCCTTAAACGTATTCCATCATGAAACTTTAT
GAACATGCAATATACTCCCTCCGTTCCTAAATATAAGTCTTTTAAGAGATTTCACTATTAACTACATAGGGAGCAAAATG
AGTGAATCTACACTCTAAAATATGTCTATATACATCCATATGTAGTTTGTAGTGGAATCTTTCAAAAGACTTATATTTAG
GAACGGAGGGACTACATCACTATATACATGCATGTGTGCCTTTTCAGAATTTTCTGAAATATCGAAATCTGATTTTTGAG
TTTTTCTGAATTCGGGCT-CCATGGAGCTGGGATCCAAAAGCAATTTCCAAACACCCAGCCTCTAACTACATCCATGTTC
ACGACAATAAGGATTGCCGACATGTCTTCAACTCAATTGTATTAAAAAGGATCG----GAGAGAGAAAGGATCTGAGTTT
GTAATATTCTTTTGTGCACAAGGAAC----TAGTGGGGTCATATACTACA----CTATTATGAATTCTGGATTAGCTGGT
TTTGTCCCTTTTGACGTCTGACTTTGTAGTTAACCCCTGCAGTTGAGGGAGCCAACTAGTGG-TGTTGCTTCTTAATTAG
TAATTTATGCGAACTCGTTGTTTCAGACGTTGTCTACATAACAAGTTCATCCTTTCTAAG-AAATCCATATTCTCTGCCA
CCTTCTGTTCTTGAGCTTTCGTAGCA-AGCTTGGGCT---CGTGTTAGCAAACTCCAAACTGATGGCCGGTGGTAGTTCT
GCTGCAGAAGGTGACAAGGCG---AAGGTGGTGACCATCCTGAGCATCGACGGCGGCGGCGTGAGAGGGATCATCCCGGC
CACCGTCCTCGCCTTCCTCGAAAAGGAGCTCCAGGTAAGAGACTTTGATA---TATACGTTCATCATCTATCTTGTC---
-ATCAAGTATATGTATACGCAATACACATGCTTGTGAATGGAGTATAGGAGTATATCACCGC-------ATGAGTTGTGT
GTAGAAACTGGACGGGCCGGATGCTAGGATCGCGGACTACTTCGATGTCGTCGCCGGCACGAGCACGGGCGGCCTCTTGA
CGGTGATGCTCGCGGCGCCGGACAAGGATGGGCGGCCGCTGTTCGACGCCAAGGATCTGGCCAAGTTCTACATCGACGAG
TCGCCCAAGATCTTCCCTCAGAAGTA--------ACTCACCAACTGAG-ATGCATGCATACTTTGTATATGTCGTCCATT
TCTTTGCTACACGCAAGTTCAACGTCGATTGTCATCTGGATTATTGCGTGGGAAGC---------------------TGC
AGGGGCTCCATCTTCTCCAAGATCGGCTCGGCTCTGGCTCTGGCGACGGGGCCCAAGTACGACGGCAAGTACCTCCATTC
GCTGCTCCGTCAGCACCTCGGCGACACCAAGCTGGACGGGGCTCTGACCCATGTGGTCATCCCGGCATTCGATATCGCGT
ACCTGCAACCCACCATCTTCTCCAGCTTCCAGGTATCCATCCATGTGGTGCATGCACATG------GTGAA-----C---
-TA-----------------------------------------------------------------------------
----------CCTAGTAGTAGTAGTTAAGTAATTGACTAAGCTGCTTGTG----TGCATGATTGATCAGTTGGAGAACCA
GCCCGCCAAGAACGCGCTCCTGTCGGACATCGCCATCGGCACCTCCGCCGCACCCACCTTCTTCCCGGCGCACTACTTCG
AGACCAACGACGGCAAGGGCGGCACGAGGGCCTTCAACCTCATCGACGGCGCCGTGGCCGCCAACAACCCTGTATGTTAC
CAACTAACTAATTGACCTCGCTGCCGCATTCACAAATCACAATACGTATACACAATAATCTCACTCATGGACTGCATATG
TATGTATGC---TGCAGACTCTATTGGCGATGAACCAGGTGGCGGAGCACATGGTCCTCGCCGGGCAGCAGCCGGCG---
GGCAAGTCATACATAGTCATCTCCATCGGCTGTGGGACATCATCGCTCCCAAAACTCAAGTACAGCGCCAAGGATGCCGC
CAAGTGGGGCATCTTGAGCTGGCTCATCAAGGACGGCTCCGTCCCCATCCTCGACATGTTCAACGCCGGTAGCGCCGACA
TGGTCGACTTCCACCTCTCCGTCCTCTCCGCCGTCCTCGGCTCCTCCCACCAGTACCTGCGCATCCAGGTGCTTGCACAC
CTACCCTATTACTATTGGTAGTATTATATATACTACTATTACACCAAAAACAT-AAAAAGAGGATAGTCCTTATTTTCGG
CATCGATTGATACATGTAGCCATCCATCATCTGTTGTAGTA---------------ATGACTCAACCGATGACTCAATGA
TCCATTGTA--TGCAAGTGCAGTATGATAAACTGAGCGGGAGCGCCGGCTCGATCGACGACTGCTCCAAGGCCAACTTGG
ATAAGTTGGTGAAGATTGGTGAAGAGCTGCTCAGCGAGAAGGTGTCCGGGGTGGACCTGGAGACCGGCCGGAATGTGGAG
GTGCCCGGCGGGGGCACCAACGCGGAGGAGCTAGCCAAGTATGCAAGGCAGCTCTCCGACGAGCGGCGCAGACGCCGCAA
CAATTAATATCTGCCTGCTCGAACCAAACTAGCAATTGCATGCTAGTTAATGTGTGTGTTTAAGTTCACTTTTACGTTCA
GTTTGGGAGTTCAATCTATTTGATTTATGTCGTCGTTTGTAAATTCTATGGTGCTGTTGTAATAGTCTTGTGCAAAAATC
ATTGGCACAAATAATATCTATTATGATATTAATATGTGGTTTATGTGACGTGGAAATGATATCATGTTAACTATGGTGCT
GTTGTAATAGATTTGTTTTCAAAAGTCACCTAATGATAATTGTGATTTTGCGTTACATATATAAACCATGTTAACTGAAG
TTTCATGGCCATTGTTAGAG------------------TCGTATATCACGAACCAGAAATGCTATTTCTACCTAATATTT
TTACGAAATTTCTACGCACAAATAAGGTGGAGCTCTGGGCTGCAACCACCTCAGCACAGAGTGAGTCTGATGCTGCTCTA
ATACACTGCATGGTTTTTCCTACCTTGGACACGGTATGAGGTGTCAACCCTCAACACCGATGCTACCCGTGCACATAATT
CACGCTCTATACAGGTTCTAAACCTCTTAATATACTTGCCTTTTATGCACTAGTTCGCTCAAGAATCCTTGATCATTCAC
TTTTGAGTCGTACGTATCGGTGTATGTAACGTCTCCGTTCTGGTTTGTATGGTTGCGACTCGCGAGTATCCATAAATTGT
CAATTTAATCAACGTGTTACAAGTTATA----------------------------------------------------
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-------------------------------------------------TGTTATAACAGCATACCATGAGAATTTTTTT
TGTATATGAATTCAATGGTATGATTTTTAGGACATATATTTCATATTGCGTTAGCAAAATTGACAGTCCACGGATGTATT
ATAAACAGGT---GAAAGAGCAACTTGTAAGCCGAAGAGGCTT-------------------------------------
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------------------------------CCCAATGACATAAGCAAGGATAA---------------------------
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-------TGTTTGCATGC----CAGAGGGACACATGCTATCCTTATCCACATCGATCTTCATACTATTCCAGCTGTACAT
GTCCTGGAGAGGAATCAATACGTGCACCCATATG
>chr5D_1
AGCATTTTATGGATTCCTCATAATGTATCTATGTAGTTCATACAGAGACAAAACAGTTCGAACTCCTATGAGTGTGCATT
TGGGCTCCCGGGTTCCCTAGAGCTTGCATTTTTCAAAAATCATATTTGTAATTTCAAAAAAATTCTTAAAAATATGCACG
TAAGTAGGGATGTGCAGTTCATGTTTGTAA---------------------TTGAAGTGTGTTTTGATGCAAACCACACG
AAACGAACATGAACTTTATGTGAGCAGTGCAAGTGCTAGACCGTGATTTTCCTTAAACATATTCCATCATGGAACTTTAC
AAACATGCAATATACATCCCTATTTACAC---------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------GTGTGCCTTTTCAGAATTTTCTGAAATATCAAAATCTGATTTTTGAG
TTTTTCCGAATTCGGGCTTCCATGGAGCCGGGATCCAAAAGCAATTTCCAAACACCCAGCCTCTAACTACATCCATGTTC
ACAACAATAAGAATTGCCGACAAGTCTTCAACTCCATTGTATTAAAAAGGATCGGAGAGAGAGAGAAAGGATCTGAATTT
GTAATGTTCTTTTGTGCACAAGGAAC----TAGTGGGGTCATATACTATA----CTATTATGAATTCTGGATTAGCTGGT
TTTGTCCCTTTTGACGTCTGACTTTGTAATTAGCCCCTGCAGTTGAGGGAGCCAACTAGTGG-TGTTGCTTCTTAATTAG
GAATTTATGCGAAC--GTTGTTTCAGACGTTGTCTACATAACAAGTTCATCCTTTCTAAT-AAATCCATATTCTCTGCCA
CCTTCTGTTCTTGAGCTTTCGTAGCA-AGCTTGGGCT---CGTGCTAGCAAACTCCAAACTGATGGCAGGTGGTGGTTCT
GCTGCAGAAGGTGACAAGTCG---AAGGTGGTGACCATCCTTAGCATCGATGGCGGCGGCGTGAGAGGGATCATCCCGGC
CACCGTCCTCGCCTTCCTCGAAAAGGAGCTCCAGGTAACACACTTCG--A---TATACGTTCATCATCGATCTTGTC---
-ATCAAGTATATGTAGACACAATACACATGCTTGTGAATGGAGTATAAGAGTATATCACTGC-------ATGAGTTGTGT
GTAGAAACTGGACGGGCCGGATGCTAGGATCGCGGACTACTTCGATGTCGTCGCCGGCACGAGCACCGGGGGCCTCTTGA
CGGTGATGCTCGCGGCGCCGGACAAGGATGGGCGGCCGCTGTTCGACGCCAAGGATCTAGCGAAGTTCTACATTGACGAG
TCGCCCAAGATCTTCCCACAGAAGTA--------ACTCACCAACTGAG-ATGCATGCATACTTTGTATATGTCGTCCATT
TCTTTACTACGCGCAAGTTCAACGTCGATCGTCATCTGGATTATTGCGTGGGAAGC---------------------TGC
AGGGGCTCCATCTTTTCCAAGATCGGCTCGGCTCTGGCTCTGGCGACGGGGCCCAAGTACGACGGCAAGTACCTCCATTC
GCTGCTCCGTCGGCACCTCGGCGACACGAAGCTGGACGGGGCTCTGACCCATGTGGTCATCCCGGCATTCGATATCGCGT
ACCTGCAACCCACCATCTTCTCCAGCTTCCAGGTATCCATGTGGTGC----------AAGCACATGGTGAA-----C---
-TA-----------------------------------------------------------------------------
----------CCTAGTAGTAGTAGTTAAGTAATTGACTAAGCT---TATG----TGCATGATTGATCAGTTGGAGAACCA
GCCCGCCAAGAACGCGCTCCTGTCGGACATCGCCATCGGCACCTCCGCCGCACCTACCTTCTTCCCGGCGCACTACTTCG
AGACCAACGATGGCAAGGGCGGCACGAGGGCCTTCAACCTCATCGACGGCGCCGTGGCCGCCAACAACCCTGTATGTTAC
CAACTAA----TTGACCTCGCCGCCGCATTCAA-------AATACGTGTACACAATAATCTCACTCATGGGCTGCACATG
----TATGC---TGCAGACTCTATTGGCGATGAACCAGGTGGCGGAGCACATGGTCCTCGCCGGGCAGCAGCCGGCG---
GGCAAGTCATACATAGTCATCTCCATCGGCTGTGGGACATCATCGCTCCCAAAACTCAAGTACAGCGCCAAGGATGCCGC
CAAGTGGGGCGTCTTGAGCTGGCTCATCAAGGACGGCTCCGTCCCCATCCTAGACATGTTCAACGCCGGCAGCGCCGACA
TGGTCGACTTCCACCTCTCCGTCCTCTCCGCCGTCCTCGGCTCCTCCCACCAGTACCTGCGCATCCAGGTGCTTGCACAC
CTACCCTATTAC----------------TATACTACTATTACACCAAAAACAT-AAAAAGAGGATAGTCCTTATTTTCGG
CATCGATTGATACATGTAGCCATCCATCATCTGTTGTACTAGTAATGACTCAACCGATGACTCAA------------TGA
TCCATTGTACATGCAAGTGCAGTATGATAAACTGAGCGGGAGCGCTGGCTCGATCGACGACTGCTCCAAGGCCAACTTGG
ATAAGTTGGTGAAGATTGGTGAAGAGCTGCTCAGCGAGAAGGTGTCCGGGGTGGACCTGGAGACCGGCCGGAATGTGGAG
GTGCCCGGCGGGGGCACCAACGCGGAGGAGCTAGCCAAGTATGCAAGGCAGCTCTCCGACGAGCGGCGCAGACGCCGCAA
CAATTAATATGTGCCTGCTCGAACCAAACTAGCAATTGCATGCTGGTTAATGTGTGTGTTTAAGTTCACTTTTACGTTTA
GTTTGGGAGTTCAATCTGTTTGATTCATGTCGTTC---ATAAATTCTATGGTGCTGTTGTAATAGTCTTGTGCAAAAATC
CTTGGCACAAATAATAT----TATGATATTAATATGTGGTTTATGTGATGTGGAAATGATATCAC---------------
-------TAGATTTGTCTTGAAAAGTCACCTAATGATAATTGTGATTTTGCGTTACATATATAAACCATGTTAACTGAAG
TTTCATGGCCATTGTTAGAGTTAACAAAATCTGATGAGTCGTATATCATGAACCAGAAATGCTATTTCTACCTAATGTTT
TTACGAAATTTCTACGCACAAATAAGGTGGAGCTCTGGGCTGCAACCACCTCAGCACAGAGTGAGTCTGGTGCTGCTCTA
ATACACTGCATGGTTTTTTCTATCTTGGACACGGTGTGAGGTGTCAACCCTGAACACCGATGCGCCCTGTGCACATAATT
CACGCTCTATATAGGTTCTAAACCTCTTAATATACTTGCCTTTTATGCACTAGTTTGCTCAAGAATCCTTGATCATTCGC
TTTTGAGTCGTATGTATCGGTGTATGTAACCTCTCCGTTCTGGTTTGTATGGTTGCGACTTGCAAGTATCCATAAATTGT
CAACTTAATCAACGTGTTACAAGTTATA----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------TGTTATAACAACATACCATTAGAAACTTTTT
TGTATATGAATTCAATGGTGTGATTTTTAGGACATATATTTCATATTGGGTTAGCAAAACAATCCCTT--CGGATGTATT
ATAAAAAGGTAGAGAAAGAGCAACTTGTAAGCCGAGGAGGCTT-------------------------------------
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------------------------------CCCAATGACATAAGCAAGGATAA---------------------------
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-------TGTTTGACTTGCATGCAGAGGGACACATGCTATCCTTATCCACATCGATCTTCATACTATTCCAACTATACAT
GTCCTGGAGAGGAATCAATACGTGCATCCATATG
>chr1A_654
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-----------------CGACACATCTTCAATTACATTATATTAAAAATGATAG--GAGAGAGAGAAAGGATCTGAATTT
GTAATATTCTTTCGTGCACAAGGAACTAGCTAGTGGGGTCATA--CTATA----CTATTAGGAATTTGGGATTAGCTGGT
TTTGTCCTTTTTGACCTCTGACTTTGTGATTAAGACCTGCAGTTGAGGGAGCCAACTAATGG-TGTTGCTTCTTGATAAT
TAGTTTATGTGAAC--GTTGTC--------TATATACATAACAAGTTTGTCCTTTGTAAT-AAATCCTTGA--TCTCCCA
CCTTCTGTTCAAAACGTTTGTCATTTGAGCCTAGCCT---CGTGTTAGCAAACTCCAAATTGATGGCAGGAGGTAGTTCT
GCTACAGCAGGTGACGAAGCG---AAGGTGATAACCATCTTGAGCATCGACGGCGGCGGCGTGAGAGGGATCATCCCGGC
CATCGTCCTCGCCTTCCTTGAAAAAGAGCTCCAGGTAAGTTACTCCACTTTGATATGTTCATCG-ATGATGCTCTTCGTG
TGTAGTATAT----------------CATGCTTGTTAAC--------GGAGTATATCACTGC-------ATGTGTTGTGT
GTAGAAACTGGACGGGCCGGATGCTAGGATCGCGGACTACTTCGATATCGTCGCCGGCACGAGCACGGGTGGCCTCTTGA
CGGTGATGCTTGCGGCGCCGGACAAGGATGGGCGGCCGCTGTTCGACGCCAAGGATCTAGCGAAGTTCTACATCGACGAG
TCGCCCAAGATCTTCCCACAGAAGTA--------AGTCACCAACTGAG-ATGCATGCATACTTTGTATATGTCGTCCATT
TCTGTACTACACGCAAGTTCAACGTCGATCGTCATCTGGATTATTGCGTGGGAAGC---------------------TAC
AGGGGCTCCATCTTCTCCAACATCGGCTCGGCTCTGGCTCTGGCGACAGGGCCCAAGTACGACGGCAAGTACCTCCATTC
GCTGCTCCATCGGCACCTCGGTGACACCAAGCTGGACGGGGCTCTGACCCATGTGGTCATCCCGGCATTCGATATCGCGT
ACCTGCAACCCACCATCTTCTCCAGCTTCCAGGTATCCATGCATGTGGTGCATGCACATG------GTGAA-----C---
-TA-----------------------------------------------------------------------------
----------CCTAGTAGTAGTTGTTAAGTAATTGACTAAGCT---TGTG----TGCATGATTGATCAGTTGGAGAACCA
GCCCGCCAAGAACGCGCTCCTGTCGGACATCGCCATCGGCACCTCCGCCGCACCTACCTTCTTCCCGGCGCACTACTTCG
AGACCAACGATGGCAAGGGCGGCACGAGGGCCTTCAACCTCATCGACGGCGCCGTGGCCGCCAACAACCCTGTATGTTAC
CAACTAA----TTGACCTCGCCGCCGCATTCC-------CAATACGTATAAACAATAATCTCACTCATGGACTGCGTACG
----TATGC---TGCAGACTCTATTAGCGATGAACCAGGTGGCGGAGCACATGGTCCTCGCCGGGCAGCAGCCGGCG---
GGAAAGTCATATATAGTCATCTCCATCGGCTGTGGGACATCATCGCTCCCAAAACTCAAGTACAGCGCCAAGGATGCCGC
CAAGTGGGGCATCTTGAGCTGGCTCATCAAGGACGGCTCCGTACCCATCCTCGACATGTTCAACGCCGGCAGCGCCGACA
TGGTCGACTTCCACCTCTCCGTCCTCTCCGCCGTCCTCGGCACCTCCCACCAATACCTGCGCATCCAGGTTCGTACCCGC
CTACC-TATTACAATTAGTAATTTA--------------TACTCCAAAAACATAAAAAAGAGGATAGTCTTTATTTTTGG
CATCGATTGATACATGTAGCCATCCATCATCTGTTGTAGTA---------------ATGACTCAA------------TGA
TCCGTTGTAAACGCAAGTGCAGTATGATAAACTGAGCGGGAGTGCGGGTTCGATCGACGACTCCTCCAAAGCCAACTTGG
ATAGGTTGGTGAAGATTGGTGAAGAGCTGCTCAGCGAGAAGGTGTCCGGGGTGGACCTGGAGACCGGCCGGAATGTGGAG
GTGCCCGGCGGGGGCACCAACGCGGAGGAGCTAGCTAAGTATGCAAAGCAGCTCTCCGACGAGCGGCGCAGACGCCGCAA
CAATTAATATGTGCCTGCTCGAACCAAACTAGCAATTGCATGCTAGTTAATGTGTGTGTTTAAGTTCACTTTTACGTTTA
GTTTGGGAGTTCAATCTGTTTGATTTATGTCGTTC---ATAAATTCTATGGTGCTGTTGTAATAGTCCTGTGCAAAAATC
ATTGGCACAAATAATAT----TATGATATTAATATGTGGTTTATGTGACGTGGAAATGATATCAC---------------
-------TAGATTTGTTTTCAAAAGTCACCTAATGATAATTGTGATTTTGCGTTACATATATAAACCATGAGAGCCTCCT
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------GGAGGGATT
GTTTCATGATCGAGAAAGAGCAGCTGGAAAAAAATCCTATACGACCTGGGTCGTACGCCCTCGTCGTGAGACCACCTCCA
GTGACCGGCACGTGGCAATTCGAATCTCAAAGCAAACCTATTCTCGATTCCCCTTTCTTTCTCCAGCGCCGCCGCGATTC
TCATCGTTGTTGTTTTGTAGAACCACCGATGCTTCATGATCCCTTCAATTCCCTCTCCTTCTCGTCTCTGAAGACGGCAA
GAGAGCCTCCTGGCTACTACGGCAGCAGCTCCTTCCCAAACTTGCAGATTCATGCGACCAATCCCCATGGTGCCGATGGA
TGGTCTGAACAAGGCGAGGAGCAGCAGGGACGATGATATATCCATTGCGCAACCACGGCCCCTCTTGCCAATTTACGGCA
GCAACGAGTTTAGGGAGCTGCAGCCTGCGCCCTCTTGCTCATTTACGGCAGCCGCGGCCTGCGCCCTCTCACTAATTTAC
CTCCAGCCAGAGCTCAGCGCAATGGTGCGTCCTATCTAGGACCAGCACCAACATGGGCATAGCAGGTTGAATCAGTGGCG
CCCTGTGTCGAGGCTCTAGCTGCAAAACATTCTGAAGCCATGTCGCAGGGAGCACTAAGACTGCTGGAGAAGAAAGGGGA
ATCAGAGAATATCGCTCTTGTTGCTTTGAGATTCGAATTGCCAGCTGTCAGCCCCTGGAGGTGGTCTCACGACGTGAGGC
GTACGACCCAGGTCGTATAAGATTTTTTTCCCCAATGACATAAGCAAGGATAAGGCTGGTCACAATGGGCAGGAACATAA
GCTAGTAACCTACACACTTCCCTAGAATATGTTACTACCTCCATAGTGGGTAGGAACATGTATGTAGTGTCATGCAACGA
TGTATTTATTAGGTCATAGACTCATTGTTTCTTGGAGTGTGATGTTCCGGTAACTTAGCTAGTTACCACAAGCAGCTCTC
TCTTCATTAAATATGTGCCACATAAGCAAAGTTGCATTGGAGTGTGTGATGTTACTCCTAAGTTCCTGCCCATTGTGACC
AGCCTAATGTTTGACTTGCATGCAGAGGGACACCTGCTATCCTTATCCACATCGATCTTCATACTATTCCAACTATACAT
GTCCTGGAGAGAAATCAATACGTGCATCCATATG
>chr4A_654
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------CGACACATCTTCAATTACATTATATTAAAAATGATAG--GAGAGAGAGAAAGGATCTGAATTT
GTAATATTCTTTCGTGCACAAGGAAC----TAGTGGGGTCATA--CTATA----CTATTAGGAATTTGGGATTAGCTGGT
TTTGTCCTTTTTGACCTCTGACTTTGTGATTAAGACCTGCAGTTGAGGGAGCCAACTAATGG-TGTTGCTTCTTGATAAT
TAGTTTATGTGAAC--GTTGTC--------TATATACATAACAAGTTTGTCCTTTGTAAT-AAATCCTTGA--TCTCCCA
CCTTCTGTTCAAAACGTTTGCCATTTGAGCCTGGCCT---CGTGTTAGCAAACTCCAAATTGATGGCAGGAGGTAGTTCT
GCTACAGCAGGTGACGAAGCG---AAGGTGATAACCATCTTGAGCATCGACGGCGGCGGCGTGAGAGGGATCATCCCGGC
CATCGTCCTCGCCTTCCTTGAAAAAGAGCTCCAGGTAAGTTACTCCACTTTGATATGTTCATCG-ATGATGCTCTTCGTG
TGTAGTATAT----------------CATGCTTGTTAAC--------GGAGTATATCACTGC-------ATGTGTTGTGT
GTAGAAACTGGACGGGCCGGATGCTAGGATCGCGGACTACTTCGATGTCGTCGCCGGCACGAGCACGGGTGGCCTCTTGA
CGGTGATGCTTGCGGCGCCGGACAAGGATGG-------------------------------------------------
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--------------------------------------------GCTCCCAAAACTCAAGTACAGCGCCAAGGATGCCGC
CAAGTGGGGCATCTTGAGCTGGCTCATCAAGGACGGCTCCGTACCCATCCTCGACATGTTCAATGCCGGCAGCGCCGACA
TGGTCGACTTCCACCTCTCCGTCCTCTCCGCCGTCCTCGGCACCTCCCACCAATACCTGCGCATCCAGGTTCGTACCCGC
CTACC-TATTACAATTAGTAATTTA--------------TACTCCAAAAACATAAAAAAGAGGATAGTCTTTATTTTTGG
CATCGATTGATACATGTAGCCATCCATCATCTGTTGTAGTA---------------ATGACTCAA------------TGA
TCCGTTGTAAACGCAAGTGCAGTATGATAAACTGAGCGGGAGTGCGGGTTCGATCGACGACTCCTCCAAAGCCAACTTGG
ATAGGTTGGTGAAGATTGGTGAAGAGCTGCTCAGCGAGAAGGTGTCCGGGGTGGACCTGGAGACCGGCCGGAATGTGGAG
GTGCCCGGCGGGGGCACCAACGCGGAGGAGCTAGCTAAGTATGCAAAGCAGCTCTCCGACAAGCGGCGCAAACGCCGCAA
CAATTAATATGTGCCTGCTCGAACCAAACTAGCAATTGCATGCTAGTTAATGTGTGTGTTTAAGTTCACTTTTACGTTTA
GTTTGGGAGTTCAATCTGTTTGATTTATGTCGTTC---GTAAATTCTATGGTGCTGTTGTAATAGTCCTGTGCAAAAATC
ATTGGCACAAATAATAT----TATGATATTAATATGTGGTTTATGTGACGTGGAAATGATATCAC---------------
-------TAGATTTGTTTTCAAAAGTCACATAATGATAATTGTGATTTTGCGTTACATATATAAACCATGTTAACTGAAG
TTTCATGGCCATTGTTAGAGTTAACAAAATCTGATGAGTCATATATCATGAACCAGAAATGCTATTTCTACCTAATATTT
TTACGAAATTTCTACGCACAAATAAGGTGGAGCTCTGGGCTGCAACCACCTCAGCACAGAGTGAGTCTGGTGCTGCTCTA
ATACACTGCATGGTTTTTCCTATCTTGGACACGGTGTGAGGTGTCAACCCTCAACACCGATGCGCCCTGTGCACATAATT
CACGCTCTATATAGGTTCTAAACCTCTTAATATAGTTGCCTTTTATGCACTAGTTTGCTCAAGAATCCTTGATCATTCAC
TTTTGAGTCGTATGTATCAGTGTATGTAACCTCTCCGTTCTGGTTTGTATGGTTGCGACTTGCAAGTATCCATAAATTGT
CAATTTAATCAACGTGTTACAAGTTATACTCCCCCTGTTCCGTTATATAAGGTGTATTTGTTTTTTCAAAAGACAAACGA
GTGCATGTTTGACCAAGTTTTTTTACAAAAATACATCAATACCCACAATACAAAATTTATATAATTTGATTCATCATGAA
AACTAGTTTCATATTTTATCTATTAGATATTGCAGATGTTGTTAGTTTATTCTATAATCTTGGTCAAACATTCAAATGGT
TGACTTGTACGGAAATCAATACACCTTTTATTCTGGAACGAAGGGAGTATGTTATAACAACATACCATTAGAAACTTTTC
TGTATATGAATTCAATGGTGTGATTTTTAGGACATATATTTCATATTGGGTTAGCAAAACAATCCCTT--CGGATGTATT
ATAAAAAGGTAAAGAAAGAGCAACTTGTAAGCCGAGGAGGCTT-------------------------------------
--------------------------------------------------------------------------------
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------------------------------CCCAATGACATAAGCAAGGATAA---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------TGTTTGACTTGCATGCAGAGGGACACCTGCTATCCTTATCCACATCGATCTTCATACTATTCCAACTATACAT
GTCCTGGAGAGAAATCAATACGTGCATCCATATG
>chr5B_701
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------GGATCTGACTTT
GTGATATGTTTTTTAGCACAAGGAAC----GGGTGGGGTCATA--CTATA----ATATTAGGATTAGTTGT-------GT
TCTGTCCCTTTTTATGTCAGAATTTGCAATTACACCCTGCACTTGAGGGAGCTACTTTATATTTGTTGCTTCTTAGTTAA
TTTATGAGTTGTCCCAGAC--C--------TGTCTATATAACAAGTTTGTTCTTTGTAGCCAAATCCTTAG--TTTGCCA
CATTCTGTTCTTGAGTTTTCGTAGCT-AGCTTGGGCCGTACGTGTTACCAAACTCCAAATCAATGGCAAGTAGTAGTTCT
---GCAGGAGGTGACACGGTGAGTAAGCTGGTGACCATCCTGAGCATCGATGGCGGCGGCGTGAGAGGGATCATCCCGGC
CACCGTCCTCGCCTTCCTTGAGAAGGAGCTTCAGGTAAGATACTTTTACG---TATGTTCATCA-ATCGATCTTGTCATA
TATCA-----------------------------------------------------CTGCATGTGTAATGTGTTGCCT
GTAGAAACTGGATGGGCCGGATGTTAGGATTGCGGATTACTTCGACGTGGTCGCCGGCACCAGCACCGGTGGCCTCTTGA
CGGTGATGCTCACGGCGCCGGACAAGGATGGACGGCCGCTGTTCGATGCCAAGGATCTGGCAAAGTTCTACATCGACGAG
TCGCCCAAAATCTTCCCACAGAAGTACGCATGAAACAATCTAACTAAGCATGCATTCATATGTATAT--CACTATACACA
TACCAGCATATGGATCATCATTTCCTTAGTTTACGACATCGTAATTTCATCGATTCTTGGAGAGTTAATTGCCAAGGTGC
AGGGACTCAATCTTCTCCAAGATCGGCACAGCTCTGGGGATGGTGACCGGGCCCAAGTACAACGACAAGTACCTTCAGTC
GCTCCTCCGTCGGCACCTCGGCGAAACGAAGCTGGACGGAGCTCTCACCAGCGTGGTGATCCCGGCCTTCGATATCGCCC
ACTTGCAACCCACCATCTTCTCCAGCTTCCAGGTACCCATGTGATGC----------ATACATGGTATGGTACTGCCTAT
GTA-----------------------------------------------------------------------------
----------CCTAGTAAC-------AAGCAATCAAATAATCA---TATGTGCATGCATGATTGATCAGTTGAAGAACCA
GCCAGCAAAGAACGCGCTCCTGTCAGACATCGCCATCGGGACCTCCGCCGCACCCACCTTCTTCCCGGCGCATTACTTTG
AGACCGAAGACGGCAAGGGCGGCACAAGGGCCTTCAACCTCATCGACGGTGGCGTGGCCGCCAACAACCCTGTAACTACT
TAAGTTCACCAGTACACG--------------CAACTCACAATTGGTCGTCTGGCAGGCCCAACTGACTCGATATCTCAC
GTGCATGACTAATGTAGACACTATGCGCGATGAGCCATGTGGCGGAGGACATCATCGTGGCTGGGAACGGTGACTTGCTC
GGGAAGTCATACATGGTCATCTCCATCGGCTGCGGGACGTCTTCGAATCCAAAAGGCAAGTATAGTGCTAAGGACACCGC
CAAGTGGGGCATCCTGAACTGGATCCTCAAGGGCGGCACCGTCCCGATCCTCGACATGTTCAATGCAGCTAGCGGCGACA
TGGTCGACATCCACCTCTCTGTCCTCTCCGCCGCCCTCGGCTCCTCCCATCAATACCTGCGTATCCAGGTACCTACCGAC
CTACC-TATTA---------------------------------------------------------------------
--------------------------------------------------------------------------------
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>chr5D_701
--------------------------------------------------------------------------------
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--------------------------------------------------------------------GGATCTGACTTT
GTGATATGTTCTTGAGCACAAGGAAC----CTGTGGGGTCATA--CTATATATAATATTAGGATTAGTTGT-------GT
TCTGTCCTTTTTTATGTCTGACTTTGCAATTACACCCTGCACTTGAGGGAGCCAGTTAATATTTGTTGCTTCTTAGTGAA
TTTATGAGTTGTCCCAGAC--C--------TGTCTATATAACAAGTTTGTTCTTTCTAGCCAAATCCTTAG--TTTGCCA
CATTCCGTTCTTGAGTTTTCGTAGCT-AGCTTGGGTCGTACGTGTTACCAAACTCCAAATCAATGGCAAGTAGTAGTTCT
TCTGTAGGAGGTGACACGGTGAATAAGCTGGTGACCATCCTGAGCATCGATGGCGGCGGCGTCAGAGGGATCATCCCGGC
CACCGTCCTCGCCTTCCTTGAAAAGGAGCTCCAGGTAAGATACTCCACTTTGATATGTTCATCG-ATCGATCCTGTCATA
TATCAAGTATATATATGTGTACATGCTAGCTTCTCATTC-------------ATATCACTGCATGTGTAATGTGTTGCGT
GTAGAAACTGGACGGGCCGGATGCTCGGATCGCGGATTACTTCGACGTGGTCGCCGGCACCAGCACCGGTGGCCTCTTGA
CGGTGATGCTCACGGCGCGGGACAAGGATGGACGGCCGCTGTTCGACGCCAAGGATCTGGCAAAGTTCTACATCGACGAG
TCGCCCAAAATCTTCCCACAGAAGTACGGATGCAACTAAGTAAACATACATGCATTTATATGTATATATCACTATACGCA
TAAAAGCACGTGAATAATCATTTCCTTAGCCTCCGACATCGTAAC---------------------AATTGCCAAGGTGC
AGGGACTCCATCTTCTCCAAGATCGGCACAGCTCTGGGGATGGTGACCGGGCCCAAGTACAACGACAAGTACCTTCAGTC
GCTCCTCCGTCGCCACCTCGGCCAAACGAAGCTGGACGGAGCTCTCACCAGCGTGGTCATCCCAGCCTTCGATATCGCCC
ACCTGCAACCAACCATCTTCTCCAGCTTCCAGGTGCCCATGTGATGC----------ATGCATGATATGGTACTACC---
-TA-----------------------------------------------------------------------------
----------CCTAGTAAC-------AAATAATCAACTAATCA---TATGTACATGCATGATTGATCAGCTGAAGAACCA
GCCAGCGAAGAACGCGCTCCTGTCAGACATCGCCATCGGCACCTCCGCCGCACCCACCTTCTTCCCGGCGCATTACTTTG
AGACCGTAGACGGCAAGGGCGGCACAAGGGCCTTCAACCTCATTGACGGCGGCGTCGCCGCCAACAACCCTGTA------
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----------------------------------
>chr4A_1231
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---------------------------------------------------------------------ATGTGTTGCCT
GTAGAAACTGGACGGGCCGGATGCTCGGATCGCGGATTACTTCGACGTGGTCGCCGGCACCAGCACCGGTGGCCTTTTGA
CGGTGATGCTCACGGCGCCGGACAAGGATGGACGGCCGCTGTTCGATGCCAAGGATCTGGCAAAGTTCTAAATCGACGAG
TCGCCCAAAATCTTCCCACAGAAGTACGCATGCAACTAACTAACTAAGCATGCATTCATATGTATAT--CACTATACACA
TACCAGTATATGGATCATCAGTTCCTTAGTTTACGACATCGTAATTTCATCGATTCTTGGAGAGTTAATTGCCAAGGTGC
AGGGACTCAATCTTCTCCAAGATCGGCACAGCTCTGGGGATGGTGACCGGGCCCAAGTACAATGGCAAGTACCTCCAATC
GTTGCTCCGTCGGCACCTCGGCGACACCAAGCTGGACGGGGCTCTCACCAGCGTGGTGATCCCGGCCTTCGATATCACCC
ACCTGCAACCCACCATCTTCTCCAGCTACCACCAGGT-ATCCATGTGATGCACGCATATGCATGGTATGGTGCTACC---
-TATGTACTCCCTCTGTCCTAGAATATAAAAACGTTTTTGGCACTATGCTAGTGTTAAAAACGTTTTTATATTTTAGGAC
CAAGGGAGTACCTAGTAAC-------GAACATTCAACTAATCA---TATGTGCATGCATGATTGACCAGCTGAAGAACCA
GCCAGCGAAGAACGCGCTCCTGTCAGACATCGCCATTGGCACCTCCGCCGCACCCACCTTCTTCCCGGCGCATTACTTTG
AGACCGAAGACGGCAAGGGCGGCACAAGGGCCTTCAACCTCATTGACGGCGGCGTCGCCGCCAACAACCCTGTA------
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----------------------------------
>SNPs
--------------------------------S------------------S----------S-----------------
-S-S----------------------S-S-----------S-----SSSSS--S-------SSSSSSS--S---S-SSSS
S--S-SSSSSSSSS-S--SSSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSS--S--S-SS---------SS------S-S
---S----SSSSSSS-S-----------------S-------S---------------S------------S-------S
S--------------SS--SSSS--S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------------S----------------
------S---------------------S---------------------------------------------------
--S--------S----------S-----------S-----------------------------------------S---
------------------------------------------------S-------------------------------
----------------------------S---------------------------------------------------
--------------SS-------------------------------------------S--------------------
-------------------------------------------------------------------S------------
--------------------------------------------------------------------------------
----------------------------------------S---------------------------S-----------
-----------------------------------------------------------S--------------------
---------------------------------------------------------------------S----------
-------------------------------------------------------------S------------------
-----------------S--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------S--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------SSS----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------SSS-----------S-------------S--------------------------------------------
SSSS----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------S---S---S-S-SSSS----------------------------------------------------
-----------------------------------------------------------------SSSSSSSSSSSS---
---------------------------------------------S----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------S-------------------------------------------------------------------S-
-----------------S---------------SSSSS------------------------------------------
-----------------SSSS-------------------------------------------SSSSSSSSSSSSSSSS
SSSSSSS-------------------------------------------------------------------------
------------------------------------------------S-------------------------------
---------------------------------------------------------------------S----------
----------------------S------------S---------------------------SS--S------------
-----------S-------------------------------------------S------------------------
------------S-----------------S-----------------------------S--S----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------S--------S----SS-----
-------------------S----------------------------S----------SSSS-SS-SSS----------
-----S-----------------------------S--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------SS-SS-----------------------------------------------------S--S-----
--------------------------S-------
>forward_283
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------GCAGTGCAAGTCCTAGACCA-------------------------------------
--------------------------------------------------------------------------------
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----------------------------------
>reverse_2182
--------------------------------------------------------------------------------
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---------------------TGCCGCATTCACAAATCACA---------------------------------------
--------------------------------------------------------------------------------
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----------------------------------
>forward_1458
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------AG
TCGCCCAAGATCTTCCCT--------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------
>reverse_2971
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------CTGCCTGCTCGAACCAAACT--------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------
