>input_sequence_43860
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------ATGCAAGATGCTAACCTTTG
CTATCCAGAGGTTAGAATATCTGCACTTCACTTATGTTTGGTGGGCAAATAGTAACAGCCTCCACGGCTATATATATGCA
TCCAAGGTTCAACTTTTCTATATCCGTCGCTCCTACAAGTTATATGTGCATTGTGAAGCTTGCTCTAACTTGTACAAACT
TCACTTTGCCACTTATTCACTCGTTCATTCATATAAATGGATTATTCTAATTTGAGGCGACAAGCTGCATCTTTGAAAAA
GGGCCTCTTTGATCAGGCATGCAGTCAAT-------TCTCTGCTATTTTCTCTCTCGATAATATATCTTACGTTTGTTCA
GGGAGCTTTCAACCATTTATGGCTTATGTTTATCCAGGAAGCACCCCCATTTGTTATCCCATTGCCAGTCGTCTACTTCT
TTTTCATGT-TTTCTTTGACAAATCGCATGCTGATTTGGAAACAAACATTTTTATGACAGGGTCACCTTGATGAGCAATT
TCGTCAGGTGGAGGACTTGCAGGATGAAGCTAGTCCTAATTTTGTGGAAGAAGTTGTCGTGGTGTTCTTTAAAGATTCTG
GCAGGCTAATATCAAACCTTGAGCAAGCTCTGTAAGTACCAATTATATGAATAAGAGGTCCCTTTAGTGAATGA------
--------TAGAACATGCAAGTGGTAATGTTAGACATGAAATCACTGCAGGGAGAAGTACCCCAGAGATTTCAACAGGTG
GGATGCATACATGCAGCAACTGAAAGGCAGCTGTTCCAGGTAGTTCCACAATTTCTACTAGATATCTTTGTCCACTTGCT
TATGATGC---TAGTGTGGAAGATTCAGCTCATAGGCCTTTAGCTTCATTGTTCCACATACCACAAGAACCAGCATGACT
ATTAGTTTAGTTAAGCACGTAAGGAAGCGAACGCACCC------GAAGCATTTTTTCTTCAAATGAAGATGGAGGCTAAC
TGTAGTTGTCTTTAATTCTCCAGCTTAAGCATTCTTGGTTTGTGTGAAATACCTCTGTCGAATGTCTTTGTACTGAGATC
CCATATAGCCATACCGCTATATTATTAGCGGAGAAACTCATATTGCCATATTCAGATAATTGACTGCTAAATGTGCATGT
CGTTGCCAAGCAAAAGCTCA----CAGTGTGCAGCTATCAACATTTTGCAAAATCTCAAGTTTCTGAGTTCATTTTGCAT
GCTACAAGAAAGCATGTGTCTAAACAGTTATTTTAATAAATATACATTTGATCTATCATTGACATTTGACAACTTGGTGC
AGCATCGGTGCTTCTAGGATGAAGAATGAATGCATGTCATTCAGGGATAATTGTGGGCAACGAAGTGTTGAAGGGTCCGT
CTCTCATCCCACGCCATGTCGATGCATTATTTCTTCGTAGGCTTTATCTCTATTGTTTTTCATA--ATATCTTGACTTGG
AAAAAAAAAGAACTCCATGCCGCTTTGTCATTGTTATAAA-CCAAAATGAGTCATGAGTCCGCTGCATAGCTGTTGTATG
GCGAAAACAGCCGTTTCTTACACATGTGCTTTATTTTGGTATGCAGTTGCATGGGGTCTCTCCAGAAACTGAAGAGGGAG
CATGCCATCCTGAGGCAGAAACTAGAATCCTATTTCCAGGTAACCCTTGAGGCACCGCCGTGTCAGTCTTGGTGTCATGA
CCGTTGGATCATTTCCATCAATTTGCTTACCGATGTATGTATGTTTACCATGCAGCTGCTGCGACAAGTTGGTCCTGCTG
GAGCGGCCACTAGACCTGCCATGTAA------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>chr3D_1_TraesCS3D01G275300
TGACAATTTGTCGCATACAGATTTTTT--CCTGAAATCTCAGGACACCTTTACACATAAAGGTCACAGTATCCTACTGTT
ATTTACCA-CAAAGCAGTTAACCATTAGCTGAACAAGATACCGATGTAAGTTAATCATATTTTCATCTTTTTTAGGTGAA
TGAATCATTTTTTTTGAGTTAGGTTGCTTGCCCAACAGGTATTAGTTGAACACCAGTTTGATGTTAGTAGACACAGAATG
AGAACACTGCTTAGTTTACCCTTGATTTAGTCTTCGACTGTGCTTTTCATATATGAG-TTGGTACCTATAGAGAGTTAGG
AAAAGTTGCCATCTACAGGCTTATCTCAGGTCGTGTAGTAGGCTACTA------CAGGTGTTAGCAAATGAAAGCTCAAA
GTGTCGTTTCTGTTGTAACTTGTGTGGTTTAACAAATTATGGGAACAATAGCTTAACTGAATTGTAATCTGAGGCTTGAT
TAATTTCCTTTTGAACTGGTTCTTTTTTCATCTGATAGTGGAACAAAATATATTGCACGTGGGACTTCTCCACTTGTTGA
AATGTGTGCATGTATTCTCTGACTTCTTGGCAATCAATCATGAGAAATTTTTGCATGTGAGGCTGCAAATTCGTTTGAAG
TTCACCCTAATCAAA-TGTATTTACTGCATGTAGAGGGACACTAAAGCAATAT--GATATCTTGCTTTAGGTGTGGCTAT
GCCATGTTATTCTACAAACAAATGGTGCTTCCAGCTAACATTCTGTTTGGGTGGTGTTTGCTGGG-GATAGCCCATGTCC
CTTGAAACTGGGTATTGCTCTCAATTGCTTTGAACTGCCATAGTGATT-----AACCAATCTGGAGTGGTTCAAACCTCC
AAGGGTTTCCTCACACTTGTTTTACTTGAACCACTGTATATCTTA-GAAGAGCTACAGCCTACGGGAATCCGCATATATT
CAAGTCGCTCTCCAAAATGTGGATAGCTTCTGCACACGGTGGCAATCAAATCACATACGCATGCAAGATGCTAACCTTTG
CTATCCAGAGGTTAGAATATCTGCACTTCACTTATGTTTGGTGGGCAAATAGTAACAGCCTCCACGGCTATATATATGCA
TCCAAGGTTCAACTTTTCTATATCCGTCGCTCCTACAAGTTATATGTGCATTGTGAAGCTTGCTCTAACTTGTACAAACT
TCACTTTGCCACTTATTCACTCGTTCATTCATATAAATGGATTATTCTAATTTGAGGCGACAAGCTGCATCTTTGAAAAA
GGGCCTCTTTGATCAGGCATGCAGTCAAT-------TCTCTGCTATTTTCTCTCTCGATAATATATCTTACGTTTGTTCA
GGGAGCTTTCAACCATTTATGGCTTATGTTTATCCAGGAAGCACCCCCATTTGTTATCCCATTGCCAGTCGTCTACTTCT
TTTTCATGT-TTTCTTTGACAAATCGCATGCTGATTTGGAAACAAACATTTTTATGACAGGGTCACCTTGATGAGCAATT
TCGTCAGGTGGAGGACTTGCAGGATGAAGCTAGTCCTAATTTTGTGGAAGAAGTTGTCGTGGTGTTCTTTAAAGATTCTG
GCAGGCTAATATCAAACCTTGAGCAAGCTCTGTAAGTACCAATTATATGAATAAGAGGTCCCTTTAGTGAATGA------
--------TAGAACATGCAAGTGGTAATGTTAGACATGAAATCACTGCAGGGAGAAGTACCCCAGAGATTTCAACAGGTG
GGATGCATACATGCAGCAACTGAAAGGCAGCTGTTCCAGGTAGTTCCACAATTTCTACTAGATATCTTTGTCCACTTGCT
TATGATGC---TAGTGTGGAAGATTCAGCTCATAGGCCTTTAGCTTCATTGTTCCACATACCACAAGAACCAGCATGACT
ATTAGTTTAGTTAAGCACGTAAGGAAGCGAACGCACCC------GAAGCATTTTTTCTTCAAATGAAGATGGAGGCTAAC
TGTAGTTGTCTTTAATTCTCCAGCTTAAGCATTCTTGGTTTGTGTGAAATACCTCTGTCGAATGTCTTTGTACTGAGATC
CCATATAGCCATACCGCTATATTATTAGCGGAGAAACTCATATTGCCATATTCAGATAATTGACTGCTAAATGTGCATGT
CGTTGCCAAGCAAAAGCTCA----CAGTGTGCAGCTATCAACATTTTGCAAAATCTCAAGTTTCTGAGTTCATTTTGCAT
GCTACAAGAAAGCATGTGTCTAAACAGTTATTTTAATAAATATACATTTGATCTATCATTGACATTTGACAACTTGGTGC
AGCATCGGTGCTTCTAGGATGAAGAATGAATGCATGTCATTCAGGGATAATTGTGGGCAACGAAGTGTTGAAGGGTCCGT
CTCTCATCCCACGCCATGTCGATGCATTATTTCTTCGTAGGCTTTATCTCTATTGTTTTTCATA--ATATCTTGACTTGG
AAAAAAAAAGAACTCCATGCCGCTTTGTCATTGTTATAAA-CCAAAATGAGTCATGAGTCCGCTGCATAGCTGTTGTATG
GCGAAAACAGCCGTTTCTTACACATGTGCTTTATTTTGGTATGCAGTTGCATGGGGTCTCTCCAGAAACTGAAGAGGGAG
CATGCCATCCTGAGGCAGAAACTAGAATCCTATTTCCAGGTAACCCTTGAGGCACCGCCGTGTCAGTCTTGGTGTCATGA
CCGTTGGATCATTTCCATCAATTTGCTTACCGATGTATGTATGTTTACCATGCAGCTGCTGCGACAAGTTGGTCCTGCTG
GAGCGGCCACTAGACCTGCCATGTAAATACTGGAGAGCTTTTGGCGTTCGCAGGGCGCACTAATCATGGAGCAAGTACTC
TGGAAATACTATGATCCCAGCCTCTGCATCATATCTTGCTGGTC------------------------------------
----------------------------CCACTTAGATATGATGATACTCGTTTATAAAAGGAAATAAGGAGAGATGAGA
GGCCTG-CAAGTAAATACGAGAGTGAAAGATGGAATCGGATTTGCTTGTTTCTAATAAAGATGCTGTTTATCGAGCTATT
TGCTCTCCGCAAACTTTCTTCCTGGTTATTTGTTGCGGATATTGCCGTGTTTATTTGTTATTATCAGAAATAATGTGTCG
CGGCTCAAAGGTACAGCAGAGGTAGTAGTGCCTGAGAACCCAACAAACCGCACAGCGCTTGACTTGTATCGGATCAATTA
TATATGCTCATCACGATGTGGATGCTGAGGTCAGTATTGGTGACTGGCGGTGAATGATGCGTATTGGGCCTCG-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------CACAGTACGTTTCAACCTGTCAACC--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------TGGTTTCTGAGTACGCCGG---AAAAAAAGTTGGTTTCTGAGTATGAAC---TATGTCGATGTAGATACAGTA
CGTTTCAGCCAAGATAAACATCTATGAAATTGAATGTAGTGTATCCGGACATATAAGGGCCACCGTTGGATACCACTTTG
CGCATAGACGAGTACTAGTAGCC---TTGGTACTCCCTCCATTTCTAAATATAAGTCTTTTTAGAGATTCTAGTACGGAC
TAGATACGAAGCAAAATGAGTTAATTTACACTTC-AAATATATCTATATACATCCATATGTGACATGTATTGAAATCTCT
TTACAAATCTTATATT-AGTAACAGAGGGAGTAGTTGAAGGGAAAGGGAATGGGAGTTTAGAAGGGGAAGTTTGTTGGGG
GATTAGGCTTGGGAAGTGGACTATTAGTCCTAGTCTT-CGTTTGGTGCATGTTGGAAATTACTTGTAGAAACTTAACAAG
AA-AATAATTTCCTCCCTTTGGTTCGTGAGTCAAAGTAACAGAAGATGCTGAT
>chr3B_1
TGACAATTTGTCGCATACAGATTTTTT--CCTGAAATCTCAGGACAACTTTACACATAAAGGTCACAGTATCCTACTGTT
AT-TACCA-CAAATCAGTTAACCATTAGCTGAACAAGATACCGATGTAAGTTAATCATATTTTCTT-TTTTTTAGGTGAA
TGAATCGTTTT-TTTGAGTTAGGTTGCTTGCCCCACAGGTATTAGTTGAACACCAGTTCGATGTTAATAGACACAGAATG
AGAACACTGCTTGGTTTACCCTTGATTTCTTCTTCGACTGTGCTTTTTATATATGAG-TTGGTACCTATAGGG-------
-AAAGTTGCCATCTACAGGCTTATCTCAGGTTGTGTGGTAGGCTACTA------TAGGTGTTAGCAAATGAAAGCTTAAA
GTGTTGTTTATGTTGTAACTCCTGTGGTTTAACAAATTATAGGAACAGTAGCTTAACTGAATTGTAATCTCAGGCCTGAT
TAATTTCCTTTTGAACTAGTTCTTTTTTCATCTGATAATGGAACAAAACATATTGCACTTGGGACTTCTCCACTTGTTGA
AATGTGTGTATGTATTCTCTGACTTCTGGGCAATCAATCATGAGAAATTTTTGCATTTGAGGCTGTAAATTCGTTTGAAG
TTCACCCTAATCAAACTGTATTTACTGCATGTAGAGGGGCACTAAAACAATATACGATATCTCGCTTTAGGTGTGGCCAT
GCCATGTTACTCTACAAACAAACGGTGCTTCCAGCTAACATTCTGTTTGGGTGGTGTTTGCTGGTAGATAGCCCATGTTC
CTTGAAATTGGATATTGCTCTCCATTGCTTTGAACTGTCGTAGTGATT-----AACCAATCTGGAGTGGTTCAAACCTCC
AATGGTTTCCTCACACTTGTTTTACTTGAACCACTGTATATCTTA-GAAGAGCTAGAGCATACGGGAATCCGCATATATT
CAAGTCGCTCTCCAAAATGTGGATAGCTTTTGTACACCGTGGCAATCAAATCACCTATGCATGCAAGATGCTAACCTTTG
CTATCCAGAGGTTAGAATATCTGCACTTCACTTATGTTTGGTGGGCAAATAGTAACAGCCTCCACGGCTATATATATGCA
TCCAAGGTTCAACTTTTCTATATCCGTCGCTCCTACAAGTTATATGTGCATTGTGAAGCTTGCTCTAACCTGTACGAACT
TCACTTTGCCACTTATTCACTCGTTCATTCATATAAATGGATTATTCTAATTTGAGGCGACAAGCTGCTTCTTTGAAGAA
GGGCCTCTTTGATCAGGTATGTAGTCAACTCTCAACTCTTTGCTATTTTCTC--------ATATATCTTAAGTTTGCTCA
GGGCACTTTCAACCATGCATGGCTTATGTTTATTCAGGAGACCT-CCCATTTGTTACCCCATTGTCAGTAGTCTACTTGT
TTTTCATGTTTTTCTTTGATAAATCACATGCTGATTTAGAAACAAACATTTTTATGACAGGGTCACCTTGATGAGCAGTT
TCGTCAGGTGGAAGACTTGCAGGATGAAGCTAGTCCTAATTTTGTGGAAGAAGTTGTGGTGGTGTTCTTCAAAGATTCTG
GCAGGCTAATATCAAACCTTGAGCAAGCTCTGTAAGTACCAAGTATAGGAATAAGAGCTCCCTTTAGTGAATGAAAAAGA
AATATAGTTAGACCATGCAAGTGGTAATGTTAGACATGAAATCACTGCAGGGAGAAGTACCCCAGAGATTTCAGCAGGTG
GGATGCATACATGCAGCAACTGAAAGGCAGCTGTTCCAGGTAGTTCCACAATTTCTACTAGATATCTTTGTTCACTTGCT
TATGATGCATGTAGTGCGGAAGATTCAACTCATAGGCCTTTAGCTTCATTGCTCCGCATACTAAGAGAACCAGCGC-ACT
TTTAGTTTAACTAAGCACGTAGGGAAGCTGATGCACCCTTTTTGGAACCATTTTTTATTCCTTCAAATGACACA--TAAC
AGTAATTGTCTCTGATTCTCCAGCTTAAGCATTCTTGGTTTGTGTAAAATACATCCGTCGAATGCCTTTCTACTGAAACC
--------CCATACCGCTATATTATAAG-GGAGAAACTCATATTGCTATGTTTGGATAATTGACTGCTAAATGTGCATGT
GGTTGGCGTTGCCAACTAAAAGCTCAGTGTGCAGCTACCAACATTTCTCAAAATCTCAAGTTTCCGAGTTCATTTTGCAT
GATACAAGAAATCATGTGCCTAAACAGTTTTTTTAGTAAGAAAATATTTGATCTATCATTGACATTTGACAACTTGGTGC
AGCATCGGTGCTTCTAGGATGAAGAATGAATGCATGTCATTCAGGGATAACTGTGGGCAACGAAATGTTGAAGGGTCTGT
CTCTCACCCCACTCCATGTCGATGCATCAGTTCTTCGTGGACTTTATCACTAAAGTCTTTCAGAATATATCTTCACTTGA
AAAAAAGAAGAACTCCACACCGCTTTGTCGTCATTATAAAACCAAAACGCGCCATGAGTTCGCTGTAAAGCCGTCATATG
GTGAAAACAGCCGTTACTCACACGTGTGCTTTATTTTGGTATGCAGTTGCATGGGGTCTCTCCAGAAACTGAAGAGGGAG
CATGCCATCCTGAGGCAGAAACTAGAATCCTATTTCCAGGTAACCCTTGAGGCACCGCCGTGTCAGTCTTGGTGTCATGA
CAGTTGGATCATTTCCATCAATTTGCTTACTGATGTATGTATGGTTACCATGCAGCTGCTGCGACAAGCTGGTCCTGCTG
GAGCGGCCACTAGACCTGCCATGTAAATACTGGAGAGCTTTTGGCGTTGGCAAGGCGCACTAATTATGGAGCAAGTACTC
CGGAAATACTA--ATCCCAGCCTCTGCATCATATCTTGCTGGTCTTGCTGGGAGTAGGCGCAACTCTGCCGCCGGTACAG
CAAATCAATAATACTGGATATGATATTCCTACTTAGATATGACGATACTCGTTTATAAAAGGAAATAAGGAGAGATGAGA
GGCATG-CAAGTAAATACGAGAGTGAAAGATGGAATCGGATTTGCTTGTTTCTAATAAAGATGCTGTTTATCGAGCTATT
TGCTCTCAGCAAACTTTCTTCCTGGTTATTTGTGGCGGATA-TGCCGTGTTTATTTGTTATTATCAGAAATAATG-----
------------------------------CCTGAGCACCCAACAAACCGCACAGCGGTTGACTTGTGTTGGATCAATTA
TATATGCTCATCACGATGTGGATGCTGAGGTCAGTATTGGTGACTGGTGGTGAATGATGCGTATAGGGCCTCACA-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------CACACAGTACGTTTCAGCCTGTCAACCATAGTTTAAAAAATCGAACCGTAGTTGTCGGTTCAGGT
TTTTACCCGTCGGACCGTGGTTCATTGATTCGATTGTTGGTTTTTTAAGCAATAAAATAATATATATTGAGTAATATATG
TGCTAATGTAGTGAAACAATGATCAAATAAATTATTTTCATGTAGTGGACAACAAAGTAGCACAACCGACTCGGCTATTG
GGCCGTGGGCAGACCCCGCGTACTGCTCACACGTCTTGAGATTGAATTCCACTTCTCCTAATTTCTATTAAAAAATTCCT
GGTTTTTCCCGGTTCGATGGCCCCGTTTTTCTTTGGTTTTTCAAAAAACCGGGCAGTCTGATTGCAGGACGGTCTTATTA
GCTTAAAAAACCGTTGAGACCACCGGTTTTGGGTTTTTTCGGTTCGACCGCCGGTCCGGTCCGGTTTTTAAAACTATACT
GTCAACCTGGTTTCTTAGTACGGCGGGAAAAAAAAAGTTGGTTTCTGAGTATGAACTAGTATGTCGATGTAGATACAGTA
CGTTTCAGC-AAGATAAATATCTAAGAAATTGAATGTAGTGTATCCGGAC--ATAGGGGGCACCATTGAATACCACTTTG
CGTATAGACGAGTACTAGCAGCGTGTTTGGTACCC---------CTAAATATAAGCCTTTTTAAAGATTTCAATACGGAC
TATATACAAAGCAAAATAAGTGAATCTACACTCTAAAATATGTCTATATACATCCGTAAGTGGTTTGTATTGAAATCTCT
AAAAAAAACTTATATTTAGAAACGGAATGAGTAGTTTAAGGGAAAGGGAATGTGAGTTTATAAGGGCAGCTTG--TGGGG
GATTAGGCTTGAGAAGTGGACTATTAGTCCTAGTCTCATGTTTGGTGCTTGTTGGGAATTACTTGTAGGAATTTAACAAA
AAGAACAATTTCCTCTCTTTG------GAGTCAAAGTAACAGAAGATGCTGAT
>chr3A_1
TGACAGTTTGTCGCATACAGATTTTTTTCCCTGAAATCTAAGGACAACTTTACACATAAAGGTCACAGTATCCTATTGTT
ATTTACACGCAAAGCAGTTAGCCATTAGCTGAACAAGATACCGATGTAAGCTAATCATATTTTCATCTTTTTTAGGTGAG
TGAATCAGTTT-TTTGTGTTAGGTTGCTTGCCCAAGAGGTATTAGTTGAACACCAATTCGATATTGATAGACGCAGAATG
AGAACACTGCTTGATTTACCCTTGATTTAGTCATTGACTGTGCTTTGCATATACGAGTTTGGTACCTTTAGGGAGTTAGG
AAAAGCTGCCATCT--AGGCTTATCTCAGGTCGTGTGGTAGGCTATTAGATAAGTAGGTGTTAGCAAATGAAAGCTCAAA
CTGTTGTTTCTATTGTAACTTGTGTGATTTAACAAATTGTAGGAACACTATCTTAACTGAATTGTAATCTCAGGCTTGAT
TAATTTCCTTTTGAACTGGTTCTTTTTTCATCTGATAATGAAACAAAACAAATTGAAGTTGGGACTTCTCCACTTATTTA
AATGTG-----GTATTCTCTGACTTCTTGGCAATCAATCATGAGAAAGTTTAGCATGTGAGGCTGCAAATTCGTTTGAAC
TTCACTCTAATCAAAATGTATTTACTGCATGTAGAGGGGCACTAAAACAATAT--GATATCTGGCTTTAGGTGTGGATAT
GCCATGTTACTTTACAAGCAAACAGTGCTTTCA------------------------------------------TGTGC
CTTGAAACTGGATATTACTCTCCATCGCTTTGAGCTGTCGTAGTGATAAACCAAACCAATCTGGAGTGGTTCAAACCTCT
AATGGTTTCCTCACACTTGTTCTACTTGAACCGCTGTATATCTTATGAAGAGCTACAGCCTACGGGAATCCGCATATATT
CAAGTCGCTCTCCAAAATGTGGATAGCTTTTGCACACCGTGGCATTCAAATCACCTACGCATGCAAGATGCTAACCTTTG
CTATCCAGAGGTTAGAATATCTGCACTTCACTTATGTTTGGTGGGCAAATAGTAACAGCCTCCACAGCTATATATATGCA
TCCAAGGTTCAACTTCTCTATATCCGT--CTCCTACAAGTTATATGTGCATTGTGAAGCTTGCTCTTACCTGTACGAACT
TCACTTTGCCACTTTTTCACTCGTTCTTTCATATAAATGGATTATTCTAATTTGAGGCGACAAGCTGCATCTTTGAAAAA
GGGCCTCTTTGATCAGGCATGCAGTCAAT-------TCTCTGCTATTTTCTCTCTCAATAATATATCTTACGTT------
------------------------------TATTCAGGAAGCTCCCCCGTTTGTTATCCCATTGCCAGTCATCTACTTCT
TTTTCATGT-TTTCTTTGACAAATCACATGCTGATTTGGAAACAAACATTTT--TGACAGGGCCACCTTGATGAGCAATT
TCGTCAGGTGGAGGACTTGCAGGATGAAGCTAGCCCTAATTTTGTGGAAGAAGTTGTGGTGGTGTTCTTTAAAGATTCTG
GCAGGCTAATATCAAACCTTGAGCAAGCTCTGTAAGTACCAAGTATATGAATAAGAGCTCCCTTTAGTGAATGA------
--------TAGACCATGCAAGTGGTAATGGTAGACATGAAATCACTGCAGGGAGAAGTACCCCAGAGATTTCAACAGGTG
GGATGCATACATGCAGCAACTGAAAGGCAGCTGTTCCAGGTAGTTCCACAATTTCTACTAGATATCTTTGTCCACTTCCT
TATGATGCG------------GATTCAGCTCATAGGCCTTTAGCTTCATTGTTCCGCATACCACAAGAACCAGCATGACT
G-TAGTTTAGTTAAGCACGTGGGGAAGCTGATGCACCC------GAAGCATTTTTTCTCCAAATGAAGATGGAGGCTAAC
TGTAGTTGTCTTTAATTCTCCAGCTTAAGCATTCTTGGTTTGTGTGAAATACCTCCGTCGAATGTCTTTGTACTGAGATC
CCATATGGCCACACCGCTATATTATTAGCGGAGAAACTCGTATTGCCATATTCAGATAATTGACTGCTAAATGTGCATGT
CGTTGCCAAGCAAAAGCTCA----CAGTGTGCAGCTATCAACATTTTGCAAATTCTCAAGTTTCTGAGTTCATTTTGCAT
GCTGCAAGAAAGCATGCGTCTAAACAGTTATTTTAATAACTATACATTTGATCTATCATTGACATTTGACAATTTGGTGC
AGCATCGGTGCTTCTAGGATGAAGAATGAATGCATGTCATTCAGGGATAATTGTGGGCAACGAAATGTTGAAGGGTCCGT
CTCTCACCCTAAACCATGTCGATGCATTACTTCTTTGTGGGCTTTATCTCTATTGTTTTTCAGA--ATATCTTGACTTGG
AAAAGAAAAGAACTCCATGCCACTTTGTCGTTGTTATAAAACCAAAATGCGCCATGAGTTCGCTGCATAGCTGTCCTATG
ATGAAAACAGCCGTTACTTACGCATGTGCTTTATTCTGGTATGCAGTTGCATGGGGTCTCTCCAGAAACTGAAGAGGGAG
CATGCCATCCTGAGGCAGAAACTAGAATCCTATTTCCAGGTAACCCTTGAGGCACCGCCGTGTCTGTCTTGGTGTCATAA
CAGTT-GATCATTTCCATCAATTTGCTTATTGATGTATGTATGGTTACCATGCAGCTGCTGCGACAAGCTGGTCCTGCTG
GAGCAGCCACTAGACCTGCCATGTAAATACTGAAGAGCTTTTGGCGTTCGCAAAGCGCACTAATTATGGAGCAAGTACTC
CGGAAATAC--TGATCCCAGCCTCTGCATCATATCTTGCTGGTCCTGTTGGGAGTAGGCGCAACTCTGCGGCTGCTACAG
CGAATCAATAATACTGGATATGATATTTCCACTTAGATATGATGATACTCGTTTATAAAAAGAAATAAGGAGAGATGAGA
GGCCTTCCAAGTAAATACGAGAGTGAAAGATGGAATCGGATTTGCTTGTTTCTAATAAAGATGCTGTTTATTGAGCTATT
TGCTCTCCGCAAACTTTCTTCCTGGTTATTTGTTGCGGATA-TGCCGTGTTTATTTGTTATTATCAGAAATAATGTGTCG
CGGCTCAAAGGTACAGCAGAGGTAGTAGTGCCTGAGCACCCAACAAACTGCACAGCGCTTGATTTGTATCGGATCAATTA
TATATGCTCATCACGATGTGGATGCTGAGGTCAGTATTGGTGACTGGCGGTGAATGATGCGCATAGAGGCCAAAATCACT
ATTCTGGATGAAACAATATCACAAAATGAACTGTTGATGTAATTTTTTTACCCGGCTGACTCTTTTGTGTAGTGCCCACA
GTTAGGCGCCACACTGTAATGTGCAGTGCCTGACTGACAAGCGCTACACGCCTAGCCAGCGTCGCATCCTGGACTGCATG
AAAATTGCTAAATCAGCGTCTAGTGTTTAGGTGTTGCATTAGTGGCTGCACTATTTGCCACTACATCTTGAAGCGGCCAC
TAGTGCAGCGTCTAACGCTAGGCACTACATTGTTTCGTGTAGAGCCTAGCTCTCGGGTGTTATGCACTGACTTAGCATTT
TTCAGACAACCTGCGACGCTGCCAGGTGTGTAATGCCTGTACAGTGTAATGTGACGCCTAACTGTCAGGCACTACATAAA
AGGATCAGGTGGATGAATTTTTTCGTCAATGGTTCATTTTGTGATATTGTTTCGTTTACATATCAAATTTGTCGTTTTTG
CCGTGTATAGGGCCTCACACAGTACGCTTCAGCCTGTCAACC--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------TGGTTTCTGAGTACA-CGG---AAAATTTTTTGGTTTCTGGGTATGAAC---TATGTCAATGTAGATACAGTA
CGTTTCAGCCAAGATAAATATCTACGAAATTGAATGTAGTGTATCCGGACATATAGGGGCCACCGTTGGATATCACTTTG
TGCATAGACAAGTACTAGCAGCATGTTTGGTCCTTCCTTTATTTTTAAATATAAGTTTTTTTAGAGATTTCAATATGGTC
TACATACATAGAAAAATGAGTGAATTTATAATCTAAAATATGTCTATATACATCTGCATATGGTCTGTATTAAAATCT-T
TAAAAAAACTTATATTTAGAAACAGAAGAATTAGTTTAAGGGAAATGAAATATGAGTTCATAAGGGGGAGTTTGTTGAAG
AATTAGGCTTCGGAAGTGGACTCTTAGTGCTAGTCTCACGTTTGGTGCCTGCTGGGAATTACTTGTAGGAATTTAACAAG
AA-AATAATTTCCTCTCTTTGGTTCGTGAGCCAAAGTAACAGAAGATGTTGA-
>SNPs
----------------------------------------------S---------------------------------
--------------------------------------------------------------------------------
-----------S----------------------------------------------S-------S-------------
------------S----------------------------------------------------------S--------
------------------------------------S-----------------S-------------------------
----S-----------------------------------S------S----------------------S---------
-------------------------------------S----------S---------S---------------------
--------S-----------------------------------------------------------------------
--------------------------------------S-------S---------------S-----------------
---------S------------S-----------------------------------------S-------------S-
-----------S----------S--------------S-S----------------------------------------
--S-----------------------------------------------------------------------------
-----------------------------S-------S----------------S-------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S-----S----
--------------------------------------------------------------------------------
--------------------------------------------------------S-------------------S---
---SS-----------SS---------------S--------S-------------------------------------
-------------------------S------------------------------------------------------
---------------------------------------------------------S----------------------
------------------------------------------S--------------S----------------------
------------S-------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------S--------------------------------------S------------------------
S--------------------S------SS-S------------------------------------------------
-------------------------------------------------------S------------------------
------S-------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------S----------------------------------------
----------------------------------------------------------------S---------------
------S-----S----------------S--------S-----------------------S-----------------
-----------------------------S-------------------S-S-------S--------------SS----
-S-------------S----------------------------------------------------------------
--------------------------------------------------------------------------------
-S----------------------------S------------S------------------------S-----------
----------------------------------------------------S-----------S---------------
S-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------S--------------------------------------
------------------------------------S-------------------------------------------
----------------------------------------------------------------S-------S-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------S------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------S---------------------------------------------------------
------------------S-----S------------------------------S------------------------
------------------S---S---------------SS-----------------------------SS-S-------
--S----S-------------S----------SS-------S-------------S------SSS---------------
-S-S---S-----------S------S---------S---------------S-------S-------------------
------------------------------------S-----------S------S------------S--S--------
---------------S-------------------------------------
>forward_998
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------GTGGATAGCTTCTGCACACG------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>reverse_1949
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------GAACGCACCCGAAGCATTTT--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>forward_1015
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------CACGGTGGCAATCAAATCACA-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>reverse_2532
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------TCATGAGTCCGCTGCATAGC---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>forward_2510
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------AACTCCATGCCGCTTTGTCA--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>reverse_4499
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------TAGCCTTGGTACTCCCTCCA------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
