>input_sequence_43828
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--------------------------------------------------------------------------ATGGCG
ACGACGATGACAATGCGCGGGACGGCGGCGGGGGCCGTCCTCCTGCTGGCGCTGCTGCTGCTGTCCACGACGGTGGCCCG
GGCCGAGGACCCGTACGTGTTCATGGAGTGGCACGTGACGTACGGGACCAAGAACATCGTGGGCACGCCGCAGAAGGTGA
TCCTCATCAACGGCGAGTTCCCGGGCCCCCGGATCAACTGCTCCTCCAACAACAACATCGTCGTCAACGTCTTCAACGAG
CTGGACCAGCCGCTCCTCTTCACCTGGAACGGCATCCAGCACCGCAAGAACTCGTGGCAGGACGGCCTCCCGGGCACCAA
CTGCCCCGTCGCCCCCGGCACCAATTACACCTACCACTGGCAGCCCAAGGACCAGATCGGCACCTTCTTCTACTTCCCCT
CCATCGGCATGCAGCGCGTCGTCGGCGGCTTCGGCCTCATCAGCGTCGTCAGCCGCCTCCTCATCCCGGTCCCCTACGAC
CCGCCCGCCGACGACCTGCAGGTCCTCATCGGCGACTGGTTCACCAAGGACCACGCCGTCATGGCCAGCCTCCTCGACGC
CGGCCGCAACTTCGGCCGCCCCGCGGGCGTGCTCATCAACGGCAGGGGCGGCAAGGAGGCGGCCGACCCGCCCATGTTCA
CCTGGGAGGCCGCCAAGACGTACCAACTCCGCATCTGCAACGTCGGCATCAAGTCGTCGCTCAACTTCCGCATCCAGGGC
CACGACATGAAGCTCGTGGAGATGGACGGCTCCCACACGATACAGGGCATGTACGAGTCGCTCGACGTGCACGTGGGCCA
GTGCATGGCCGTCCTCGTCGACGCCGACCAGAAGCCCGCGGACTACCTCATGGTGGCCTCCACCAGGTTCATGGCTGGCC
CCAGCTCCGTCTCCGCCGTCATCCGCTACGCCGGCTCCAACACCCCGCCGGCGGCTAACGTCCCGGAGCCGCCGGCCGGC
TGGGCCTGGTCGATCAACCAGTGGAGGTCCTTCCGGTGGAACCTGACGGCCAGCGCGGCGCGTCCCAACCCGCAGGGGTC
CTACCACTACGGCCAGATCAACATCACCCGCACCATCAAGCTCATGGTCACCCGCGGCCACATCGACGGCAAGCTCAGGT
ACGGCTTCAACGGCGTGTCCCACGTGGACGCCGACACACCCCTGAAGCTCGCCGAGTACTTCAACGTCAGCGACCAGGTG
TTCAAGTACAACCAGATGGGCGACGAACCCCCTGCCGTGAACGGCCCCATGCACGTCGTGCCCAACGTCATCAGCGCCGA
GTTCCGCACCTTCATCGAGGTCGTCTTCGAGAACCCCGAGAAGAGCATGGAGTCCGTCCACATCGACGGCTACGCCTTCT
TCGCCGTCGGGTAAC-----------CCT----------TCTTGTACTCA----------T--------GCATGCATTGC
ATGTACGGGCGGCGGCGCCGATGGAAT----GGAAATGGAG-TTGATGCATGTGATTATTGCAGGATGGGGCCGGGGAAG
TGGACGCCGGCGGAGAGGAAGACGTACAACCTGCTGGACGCGGTGAGCAGGCACACGATCCAGGTGTACCCGCGGTCGTG
GTCGGCGGTGATGCTGACGTTCGACAACGCGGGGATGTGGAACGTGAGGACCAACCTGTGGGAGAGGCACTACCTCGGGG
AGCAGCTCTACATGAGCGTCGTCTCGCCGGCGAGGTCGCTGCGCGACGAGTACAACATGCCAGAGAACGCCCTCCGCTGC
GGCAAGGTCGTCGGCCTGCCGATGCCGCCGTCCTACCTCCCCGCCTGA--------------------------------
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>chr1B_1_TraesCS1B01G314600
TGGTTTGGTGTTCGGGCTACATGGAGCACCTTTTATGAAACATTCAAAAAATCACATTTTAAAATTTAAAAAATTCTGAA
AAAATTACATTGACATATGGATGCGTACTACACATGTGCAAAATTTCATGAGAAAATACATTAATTTGTGAGATACACAC
AAAAAAGAGAGTGAAAATTCGTTGCTTTTATA-TAGTGAACAGAGCACACACTATTCACTGTGTGTTCAAAATCATTAGT
TTGTCTTTTTTGTGG----AGCTCGCGTGTCAATGTATTTTGTCATAAAAATTTGCACAC------ATGGAGTATGCATC
TGTATGATATTCTGGATTCCTTTTTCGTCAAATTTTTTTGAATCATTCAAACATTTTTTTAATTTTTCAAAAAAAGGACC
TC--CATGTAGCTCGAGCACAAAAAGGCATTTCTGCGCCAAAACATGTCAACATGGCATGATCTAA-GGCTGGCTGCAGC
TATGTGC-----GTGCTGGGCTGCCCTGGCCCGAACTGGCTGGGGAGACGCTGGAACGGATCTAAACAGGGACAGAGCGG
CAACGGCGGCAAGACAGACACA--CTGCATGCCTGCGTCCGGCCATTCCTCGGCACCGCTCCTTTGCCCCGCCATGCGCG
GCGGCAGCTATAAGTCCCTGCCCCGGCGTCCCCTCGTCACCCCGAAGCTCCCCGGTTGACCTCCCCGGTCTCCTTCCTGC
CCATCCTTCACCGTCCTACCCCTAC-----GACAACCAGGGGACGTCTTCCATGGCCTCCTCATAGT---CCCACCTATC
CCGCCGCCCGCAACTCCTACATTACAA-TCCTTCAAGGTACGCACGCACCCAGCATACATGCATCATTCATCAAA----G
GCATGCCTACAAATCGTCGTCGGATGCATGCGGTTTCCGATCAATTCATTCGAATGTGTTCGTATTTTGTGATGTAGAGA
GCAGAACTTGATATATAGCGCTCGCCAGGCCGTCCAGCTAGCCCGCCCGCCTGCTGCCACCGATCCTGATCTTGATGGCG
ACGACGATGACAATGCGCGGGACGGCGGCGGGGGCCGTCCTCCTGCTGGCGCTGCTGCTGCTGTCCACGACGGTGGCCCG
GGCCGAGGACCCGTACGTGTTCATGGAGTGGCACGTGACGTACGGGACCAAGAACATCGTGGGCACGCCGCAGAAGGTGA
TCCTCATCAACGGCGAGTTCCCGGGCCCCCGGATCAACTGCTCCTCCAACAACAACATCGTCGTCAACGTCTTCAACGAG
CTGGACCAGCCGCTCCTCTTCACCTGGAACGGCATCCAGCACCGCAAGAACTCGTGGCAGGACGGCCTCCCGGGCACCAA
CTGCCCCGTCGCCCCCGGCACCAATTACACCTACCACTGGCAGCCCAAGGACCAGATCGGCACCTTCTTCTACTTCCCCT
CCATCGGCATGCAGCGCGTCGTCGGCGGCTTCGGCCTCATCAGCGTCGTCAGCCGCCTCCTCATCCCGGTCCCCTACGAC
CCGCCCGCCGACGACCTGCAGGTCCTCATCGGCGACTGGTTCACCAAGGACCACGCCGTCATGGCCAGCCTCCTCGACGC
CGGCCGCAACTTCGGCCGCCCCGCGGGCGTGCTCATCAACGGCAGGGGCGGCAAGGAGGCGGCCGACCCGCCCATGTTCA
CCTGGGAGGCCGCCAAGACGTACCAACTCCGCATCTGCAACGTCGGCATCAAGTCGTCGCTCAACTTCCGCATCCAGGGC
CACGACATGAAGCTCGTGGAGATGGACGGCTCCCACACGATACAGGGCATGTACGAGTCGCTCGACGTGCACGTGGGCCA
GTGCATGGCCGTCCTCGTCGACGCCGACCAGAAGCCCGCGGACTACCTCATGGTGGCCTCCACCAGGTTCATGGCTGGCC
CCAGCTCCGTCTCCGCCGTCATCCGCTACGCCGGCTCCAACACCCCGCCGGCGGCTAACGTCCCGGAGCCGCCGGCCGGC
TGGGCCTGGTCGATCAACCAGTGGAGGTCCTTCCGGTGGAACCTGACGGCCAGCGCGGCGCGTCCCAACCCGCAGGGGTC
CTACCACTACGGCCAGATCAACATCACCCGCACCATCAAGCTCATGGTCACCCGCGGCCACATCGACGGCAAGCTCAGGT
ACGGCTTCAACGGCGTGTCCCACGTGGACGCCGACACACCCCTGAAGCTCGCCGAGTACTTCAACGTCAGCGACCAGGTG
TTCAAGTACAACCAGATGGGCGACGAACCCCCTGCCGTGAACGGCCCCATGCACGTCGTGCCCAACGTCATCAGCGCCGA
GTTCCGCACCTTCATCGAGGTCGTCTTCGAGAACCCCGAGAAGAGCATGGAGTCCGTCCACATCGACGGCTACGCCTTCT
TCGCCGTCGGGTAAC-----------CCT----------TCTTGTACTCA----------T--------GCATGCATTGC
ATGTACGGGCGGCGGCGCCGATGGAAT----GGAAATGGAG-TTGATGCATGTGATTATTGCAGGATGGGGCCGGGGAAG
TGGACGCCGGCGGAGAGGAAGACGTACAACCTGCTGGACGCGGTGAGCAGGCACACGATCCAGGTGTACCCGCGGTCGTG
GTCGGCGGTGATGCTGACGTTCGACAACGCGGGGATGTGGAACGTGAGGACCAACCTGTGGGAGAGGCACTACCTCGGGG
AGCAGCTCTACATGAGCGTCGTCTCGCCGGCGAGGTCGCTGCGCGACGAGTACAACATGCCAGAGAACGCCCTCCGCTGC
GGCAAGGTCGTCGGCCTGCCGATGCCGCCGTCCTACCTCCCCGCCTGAAGTCCTGATCCAACTAATTAATCCATTGACAG
ATATGAAAT-----GAGTGATGTACACGAGGAGGTCTAGGCC-------------ATGAGTTTGTTTCCATTATTGTATG
TATA--------------TGTACGTACTCCATTCTTGTGTGTTGTGTAATTGTGTTACTGTTGTTGTAATTCTTGGCGAT
CGATTTTC---TTTTTTGCTCTGGTGGAATATAACTAAGCATGCATATGGGGGCTAGTTAACCCCTCTCAAAAGAACAAC
GACGGAAGAAACGTA---TACATGTTGGAAAGAAAATTAAGGATCGGCTGGACCGGCCGGCTGGGAACGAA---------
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------------------------------------------TAATCTC-------------------------------
-------------------------CACATATATGCCCTCTCAAATCATTGTAATGGGAGCTACT---------------
-------------------------------------------------------------------------ATAAAGG
TTACCACATCATTTAACTACCTGTTATTGTTAAATTTTACAGTTTTGCTAAGTCTCAGTCGACTGACACTTCGTTATGTC
ACGGTCGATACTATATTCTTTTGATCTAGCATGGAGATTCATGCAGAAAAATTCATTATCACTTTTCCTTTTTTCTTCTT
ATGTAGACTTGAT--------------------------------TAAATAAATTAGGGTATGGCTAGGTCTCAGTTGAC
TGAGACTTAACCAAGTCTCAATCAAGTAATATAATGCTAGATAAAAAAGAAATACTCCCTCCGCCTCATAATGTAAGACT
TTTTTTACACTAGTTGCACGAATCTTCATACATGATCTCACGAATATATAATCGATTGAGACCGGACCAAGTCTCAGTCG
ACTAATATTTAGCAACACCAAATTTTTATATAAAATCAGGTCGCCTGATATTTTAAATTTAGGTAAGTCATTTTTTGGAC
AGTTGA---TTTTTTTGTCAAGATTTGTGATGTTTTCTTTCCTATGTTGTTTCGTTATT-CTTACACTATTTTCTTAGAA
ACTATTATACATTAATTTTTGACTTGCCCCTGTTTGGGATAAGTCAATTTTTTTGCTTAGGCTGAATTTTTGACTTGCCC
CTGTTTGGGTAAGTCGATTTTCCTATTGGGGTTGAAG
>chr1A_1
TGGTTTGGTGCTCGGGCTACATGGAACACCTTTTCCGAAACATTCAAAAAATCACATTTTAAACTT----------TGAA
AAAATTACATTGACATATGCATGTATACTACACGT----------------GAAAATACATCGGTTTGCGAGATACACGG
AAAGAAGTGAAAAATCGTCGGTTCTATATAGAGTAGTTAAGAGAGCACATACTGTTCAC--TGTGTTCAAAATCTCCAAT
TTGTCTTTTTTGTGTAGCTAGCTCGCGTGTCAATGTATTTCGTCATAAAAATTTACGTACATGGAGATGGGGTATACATC
CGTATGATATTCTGGAAATGTTTTAGAA------TTTTTTAATCATTGAAACATTTTTTTCTTGGATTTTTTTAAGAAGA
ACTTCATGTAGCCCGAGCACAAAAAGGCATTTCTGCGCCAAAACCTGTCAACATGGCAGGATCTAAGGGCTGGCTGCAGC
TATGTGCGTGCTGTGCTGGGCTGTCCTGGCCCGAACTGGCCGGGGAGACGCTGGAACAGGTCTAAACAGGGACAGAGCGG
CAACGGCGGCGAGACAGACACACGCTGCATACCTGCTTCCGGCCATTTCTCGGCACCGCTCCTTCGCCCCGCCATGCGCG
GCGCTACCTATAAATCCCTGCCACGGCGCCCCCTCCTCACCCCGAAGCTCCCCGGTTGACCTCCCCGGTCTCCACATCCT
TCTCCACACCGTCCTCCACCCCTCCC-----ACAACCAGGGGACGTCTTCCATGGCATCCTCATAGACCACCCACCTATC
CCGCCGCCCGCAACTCCTACATTACAAATCCTTCAAGGTACGCACGCACGCAGC--------------------------
------CTGCAAATCGTCGTCGGATGCATGCAGTTTCCGATCAATTCATTCGAATGTGTTGGTATTTTGTGATGCAGAGA
GCAGAACTTGATATATAGCGCTCGCCAGTCCGCCCAGCTAGCCCGCCCGC---CTGCCACCGATCTTGGTTTTCATGACG
ACGACGATGACAATGCGCCGGACGGCGGCGGGGGGCGTCCTCCTGCTGGCGCTGCTGCTGCTGTCCACGACGGTGGCCCG
GGCCGAGGACCCGTACGTGTTCATGGAGTGGCACGTGACGTACGGCACCAAGAACATCGTGGGCACGCCGCAGAAGGTGA
TCCTCATCAACGACGAGTTCCCGGGCCCCCGGATCAACTGCTCCTCCAACAACAACATCGTCATCAACGTCTTCAACCAG
CTGGACCAGCCGCTGCTCTTCACCTGGAACGGCATCCAGCACCGCAAGAACTCGTGGCAGGACGGCCTCCCGGGCACCAA
CTGCCCCGTCGCCCCCGGCACCAACTACACCTACCACTGGCAGCCCAAGGACCAGATCGGCACCTTCTTCTACTTCCCCT
CCATCGGCATGCAGCGCGTCGTCGGCGGCTTCGGCCTCATCAGCGTCGTCAGCCGCCTGCTCATCCCGGTCCCCTACGAC
CCGCCCGCCGACGACCTGCAGGTCCTCATCGGCGACTGGTTCACCAAGGACCACGCCGTCATGGCCGGCCTCCTCGACGC
CGGCCGCAGCATCGGCCGCCCCGCGGGCGTGCTCATCAACGGCAGGGGCGGCAAGGAGGCGGCCAACCCGCCCATGTTCA
CCTGGGAGGCCGCCAAGACGTACCAGCTCCGCATCTGCAACGTCGGCATCAAGTCGTCGCTCAACTTCCGCATCCAGGGC
CACGACATGAAGCTCGTCGAGATGGACGGCTCCCACACGATACAGGGCCTGTACGAGTCGCTCGACGTGCACGTGGGCCA
GTGCATGTCCGTCCTCGTCGACGCCGACCAGAAGCCCGCGGACTACCTCATGGTGGCCTCCACCAGGTTCATGGCCGGCC
CCAGCTCCGTCTCCGCCGTCATCCGCTACGCCGGCTCCAACACCCCGCCGGCGGCTAACGTCCCGGAGCCGCCGGCCGGC
TGGGCCTGGTCGATCAACCAGTGGAGGTCCTTCCGGTGGAACCTGACGGCCAGCGCGGCGCGTCCCAACCCGCAGGGGTC
CTACCACTACGGGCAGATCAACATCACCCGCACCATCAAGCTCATGGTCACCCGCGGCCATGTCGAGGGCAAGCTCAGGT
ACGGCTTCAACGGCGTGTCCCACGTGGACGGCGACACACCCCTGAAGCTCGCCGAGTACTTCAACGTCAGCGACCAGGTG
TTCCATTACAACCAAATGGGCGACGAACCCCCTGCCGTGAACGGCCCCATGCACGTCGTGCCCAACGTCATCACCGCCGA
GTTCCGCACCTTCATCGAGGTCGTCTTCGAGAACCCCGAGAAGAGCATGGACTCCGTCCACATCGACGGCTACGCCTTCT
TCGCCGTCGGGTAAC-----------CCTAAG------TTCTTGTGCTCA----------G--------GCATGCATTGC
ATGTACGGGCGGCGGCGCTGATGGAATTAATGGAAATGGAG-TTGATGCATGTGGGTATTGCAGGATGGGGCCGGGGAAG
TGGACGGCGGCGGAGAGGAAGACGTACAACCTGCTGGACGCGGTGAGCAGGCACACGATCCAGGTGTACCCGCGGTCGTG
GTCGGCGGTGATGCTGACGTTCGACAACGCGGGGATGTGGAACGTGAGGACCAACCTGTGGGAGAGGCACTACCTCGGGG
AGCAGCTCTACATGAGCGTCGTCTCGCCGGCGAGGTCGCTGCGCGACGAGTACAACATGCCAGAGAACGCCCTCCGCTGC
GGCAAGGTCGTCGGCCTGCCGCTGCCGCCGTCCTACCTCCCCGCCTGAAGCCCTGACCCAGTTAATTAATCCATTGACAG
ATATGAAATTAAATGATTGATGTACACGAGGAGGTCTAGCTAGGCCGCCAG---GATGAGTTTGTTTCCGTTATTGTATG
TATGTATGTATGTATGTGTGTACGTACTCCATTCTTGTGTGTTGTGTAATTGTGTTACTGTTGTTGTCGTTCTTGGCGAT
CGATTTTTTTTTTTTTTGCTTTGGTGGAATATATGATTAAGC----ATGGGGGCTAGTTTGCCCCTCTCAAAAGAACAAA
GACAGAAGAAACATAGACTACC--TTGGAAAGAAAATTAGGGCGTGTTTGTTTTCACTTTAGAACAGTAGTCGCATTGCA
TACCCTTCTCAACCCAGACTGATTGAGGAAAAACAGGCCCTAATACGCGATATGCAACTTATTTGGTTGCCTGCATCTCT
AGTCCCTGCATTAGGTAATACGTAAGTGCACTTTGTTTGGTTGGCTGCATTGGCCCTAGCGGCACATGAACACGGTGTTT
GGTTGCATACGGCGTACATGTTGTGCTTACCTTATATCCTAGTTGATGAGCTTACCCACAATGATCACACCTAGCACACC
AACGCCACAACACAGCAATGGTGATGAACTGGGCGAAGATGATGAAGTTCTTCAGCTTCAGGCCGAACTGACGATCCACC
TTAGCAATTTCCACTTTGACAACTCCAACCTTGGCACTGTCGACACTGCTGCCTCCGTGCTTTCGCACCCAGGCGGAGTA
AGCTTGTTCTGTTTCCTGCCTAGTCTTGAACCCTCTATAGTTGTTGTTGCTATACGATGCCACTTATGCATTGGCTTCTT
CCCATGAACTATAAACCCCTGAAACCTCATCGATGAACACGGCATACCACTTGCCCTAGCAATGCACAAGAGCAAGAGTT
GAAGCAGCAAATCAATGGAGCACAAGTAGCAAGCAAAGTAGCACACAAATAACAATGGAGCAGAAGAGAAGTAAAGCATG
CATGATCATACGACATAGCAAGTTCAACCTAGCACTACCTTGGTGTTAACCTACCACCACATCCAAAAGAGGGCATCGTC
CTACCACCGCAAGTTCACCATCAGCGTGAGGGGTTAGTATATACCACCTCACCAAAATATACAGACCATCAAATAGTTTT
TGAGCCCTTGCTACACAAAATGTACGTCGCCATCGTCATCATCGTCGTCGTCGCCACCGCCTTCACCGTCGGGGATCATG
CACACTCGCAGGCAGCACTACTCTAGTAGTAGTGCTTGCCGAGCCAGCTCCTGACCCACAGCACCTTGTGAGCGTCGGCC
ATGGCAACGAACCCAACACCCTGGGCCTTGTTGTCAAGCAGGTGGCTGAGAGCTGCCATGAGAGCCTCGTCACTGAATCC
ACCCTGGGTCATGACAGCGCCATACAGGTCAGGGTGGACGTCGAGGGGCTTGCACTCCCTGATGGTTGTTGCCACCTCCT
TCACCGCCTCAGTCATGCTGCAAAGACATTGATCTCCTCCTCCATCAAGCCTCCTCTCTTCCTCTTCCTATCATGGACGG
GGTCAAATGCCTTGTCGAAGGGCTTCGCAGCGGGCTTGTCAGGGCCATCAAGGACCTCGACGTCCGGTGTCCCAGGGAAG
TCTGGCATGGGAGAACCAAGAGGCTCACCCGAGCCCATGTCATGCTTCCCAGTTGCCAGCCCGAAGGAGAAGATGTGCTG
CATCTGGTTGTAGTTCTGGATGGGTGTGTTGAGGAACTCAGCGTCCCTTGGGTGGTCCTAAGAATGAAACACAAGTGTTG
TTAGTTGCGATTAGGAGTAGGTAATGGTGGACAGCATGAAAAGGCAGAGGGCTATGAGCTAACCGCGACATGGCCGGCGT
AGTGCTCTGCCTCCAGAACTATGGAGCAAGTGTTCTCATCCCATGAGGCGCCGCTCTCAGCTTGGACACTTGGATCCATC
GACTTCTCCACTTCCTTAGGTGGTTGTACACCTGGGTGGCAGACACCTCTTGCCCACAGAACTCAAACACCCGCTTCGCA
ACGGTGTTCAAGTGCACCTCCTTGAAGCCCTTGTTAGTCCTAACTCCACTAGAGATGAGCTCACACATCTTGTTCAGCAC
GGATGTGGACATGAATGGCTGCCACTTCATGTTGTTCGACCTACCATCCTTCTTTGCCTTTGCTGCTGCTAGCTTAATTG
CAGCGGCAGCAGCAGTAGTAGGAGGAGTTGGCTCAACAAGCACTACTGGCACATAGAGGGAATCAGACTTGAACACCTCT
GAATCAGGTGCCATCTCGGACATAGGCTGCGAGTCCTCGACAAACAATGGAGCAAACTGGCTATCAGACACGACAAGGGC
CTGACTAAGATCTTGCGTCTACGTGGTCATTCCTACAATCGTAGCACGCATTGACAGTGAGCATAGCACACAACATACCG
GATAATCCATGAAAGCAGGAGCATACATGTACATGGTTCATCACTATCATAGCAAGCACATGCTTCATCACTATCATACT
AAGCATACCAGACAATCTATGAGCAGGAACATACATCTACAACAAACAGCATGCTACAAATGGACCACCAATAGCTACAA
ATCACAGATCTAAGCATGATTCAACACAAGCACAGGGTTCAACTTCAAACTCTACTACTAATCTAGCCTACCACATGCTT
GAACATCTAGCCCTACCACAAATTGCAACCGCGACATAGCAACCAACCATATCAGCTCACAGATCAGACCACTAATCAAC
CATGCATCTGGATCAAACCCTAGTTGCAGCTCAGATCTAGCTAGAAGAAACAGAGAGAAAGGGGGATTGAACTCACAGAG
GCCATGGTTGCAGCTTGAGGACGAGGGGGCAGTGGTGGAAGATGAACGTCGGCCGGTGAAGGAGCTCCGACGCCGTGGAC
CGCCGGCTGATGAAGATGCGCCGCTTACCTGCTCGTCGGTGCCGATGCGCATCGGCGGGAAAGTGCGAACGGAGGAAGAA
TGGTGGCGGGAGTTGGGACGGTGAGGGAGGGGCTAAATAAGGGTGGAGCGGCGGGAGGTGAGCCGAAATCCTCCCGCCGA
TTTTTCGGCCACGCGGGCGAGCTCGCGCCATCTCCCCTGCTCGCACGAGCGGAGAAGCACGTCGCCCTCCCCTGCCTCGC
CCGAGCCAGGCTCGCGAGCTACTGCCGATTCATGCGTTTCCCCTGGGCCTGGCCTGAACGTGCTTTAAGTTTCGTGCGAT
GCGGGCCGCACAGTGAATGCAGGAAACCAAACGGGCCAAATTCTTCCCGCCCGGGCCAGGCTGGGCCTAATGCGGGCAAC
CAAACACGCCCTTAAGGATCGGCTGGGAAAAAATCATTGCGGTAATCTC-------------------------------
-------------------------GACATATATGCCCTCTCAAATCATTGTAATGGGAGTTACT---------------
-------------------------------------------------------------------------ATAAAGT
TAAACACATCATTTACCTACCTGTTCTTGTTAATTTTTACAGTTTTGCTAAGTCTCAGTCGACTGAGACTTTGTTATGTC
TCGGATGATGCTCTATTCTTTTGATCTAGCATTGAGATTCGTGCAAAACAATTCCTTTTAGTTTTTCCTTTTTCTTCTTA
TATAA----------TATATAACTTAATTGAGACTTGGTTAAGTTTCAGTCGACTGAGAC--------------------
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>chr1D_473
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------C-----GTGCTGGGCTGTGGTGGCCCGAACTGGCCGGGGAGACGCCGGAACAGATCTAAACAAGGACAGAGCGG
CAACGGCGGCGAGACAGACACATGCTGCATGCCTGCTTGCGGCCATTTCTCGGCACCGCTCCTTAGCCCCACCATGCGCG
GCGGCAGCTATAAATCCCTGCCACGGCGTCCCCTCGTCACCCCGAAGCTCCCCGGTTGACCTCCCCGGTCTCCTTCCTGC
CCATCCTTCACCGTCCTACCCCTACGACAAGACAACCAGGGGACGTCTTCCATGGCCTCCTCATAGA------------C
CCGCCGCCCGCAACTCCTACATTACAA-TCCTTCAAGGTACGCACGAGGCACA--------CATCATTCATTGGCAATCG
GCATGCCTACAAATCGTCGTCCGATGCATGCAGTTTCCGATCAATTCATTCGAATGTGTTCGTATTTTGTGATGCAGAGA
GCAGAACTTGATATACAGCGCCCGCCAGTCCGTCCAGCTAGCCCGCCCGC---CTGCCACCGATCTTGGTTTTGATGACG
ACGACGATGACAATGCGCGGGACGGAGGCGGGGGGCGTCCTCCTGCTGGCGCTGCTGCTGCTCTCCACGACGGTGGCCCG
GGCCGAGGACCCGTACGTGTTCATGGAGTGGCACGTGACGTACGGGACCAAGAACATCGTGGGCACGCCGCAGAAGGTGA
TCCTCATCAACGGCGAGTTCCCGGGCCCCCGGATCAACTGCTCCTCCAACAACAACATCGTCATCAACGTCTTCAACCAG
CTGGACCAGCCGCTCCTCTTCACCTGGAACGGCATCCAGCACCGCAAGAACTCGTGGCAGGACGGCCTCCCGGGCACCAA
CTGCCCCGTCGCCCCCGGCACCAACTACACCTACCACTGGCAGCCCAAGGACCAGATCGGCACCTTCTTCTACTTCCCCT
CCATCGGCATGCAGCGCGTCGTCGGCGGCTTCGGCCTCATCAGCGTCCTCAGCCGCCTCCTCATCCCGGTCCCCTACGAC
CCGCCCGCCGACGACCTGCAGGTCCTCATCGGCGACTGGTTCACCAAGGACCACGCCGTCATGGCCAGCCTCCTCGACGC
AGGCCGCAACTTCGGCCGCCCCGCGGGCGTGCTCATCAACGGCAGGGGCGGCAAGGAGGCGGCCAACCCGCCCATGTTCA
CCTGGGAGGCCGCCAAGACGTACCAGCTCCGCATCTGCAACGTCGGCATCAAGACGTCGCTCAACTTCCGCATCCAGGGC
CACGACATGAAGCTCGTGGAGATGGACGGCTCCCACACGGTGCAGGGCATGTACGAGTCGCTCGACGTGCACGTGGGCCA
GTGCATGGCCGTCCTCGTCGACGCCGACCAGAAGCCCGCGGACTACCTCATGGTGGCCTCCACCAGGTTCATGGCCGGCC
CCAGCTCCGTCTCCGCCGTCATCCGCTACGCCGGCTCCAACACCCCGCCGGCGGCTAACGTCCCGGAGCCGCCGGCCGGC
TGGGCCTGGTCGATCAACCAGTGGAGGTCCTTCCGGTGGAACCTGACGGCCAGCGCGGCGCGTCCCAACCCGCAGGGATC
CTACCACTATGGCCAGATCAACATCACCCGCACCATCAAGCTCATGGTCACCCGCGGCCACGTCGAGGGCAAGCTAAAGT
ACGGCTTCAACGGCGTGTCACACGTGGACGGCGACACACCCCTGAAGCTCGCCGAGTACTTCAACGTCAGCGACCAGGTG
TTCAAGTACAACCAGATGGGCGACGAACCCCCTGCCGTGAACGGCCCCATGCACGTCGTGCCCAACGTCATCACCGCCGA
GTTCCGCACCTTCATCGAGGTCGTCTTCGAGAACCCCGAGAAGAGCATGGAGTCCATGCACATCGACGGCTACGCCTTCT
TCGCCGTCGGGTACGCGTGACGTGACCCT----------TCTTGTACTCA----------TGCATGCATGCATGCATTGC
ATGTACGGGCGGCGGCGCCGATGGAAT----GGAAATGGAGTTTGATGCATGTGAGTATTGCAGGATGGGGCCGGGGAAG
TGGACGGCGGCGGAGAGGAAGACGTACAACCTGCTGGACGCGGTGAGCAGGCACACGATCCAGGTGTACCCGCGGTCGTG
GTCGGCGGTGATGCTGACGTTCGACAACGCGGGGATGTGGAACGTGAGGTCCAACCTGTGGGAGAGGCACTACCTCGGGG
AGCAGCTCTACATGAGCGTCGTCTCGCCGGCGAGGTCGCTGCGCGACGAGTACAACATGCCAGAGAACGCCCTCCGCTGC
GGCAAGGTCGTCGGCCTGCCGATGCCGCCGTCCTACCTCCCCGCCTGAAGCCCTGACCCAGT----TAATCCATTGACAG
ATAT-----TAAATGAGTGATGTACACGAGGAGGTCTAGGCCGCCAGGAGGGAAGATGAGTTTGTTTCCGTTATTGTATG
TATGTATGT--------GTGTACGTACTCCATTCTTGTGTGTTGTGTAATTGTGTTAC---TGTTGTTGTTCTTGACGAT
CGATTTTC---TTTTTTGCTTTGGTGGAATATATGATTAAGC----ATGGG--CTAGTTAGCCCCTCTCAAAAGAAGAAA
GACAGAAGAAACGTA---TACA--TTGGAAAGAAAATTAAGGATCGGCTGGACCGGCCGGC-------------------
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-------------------CGGCTGGAAACAAATCATTGCGGTAATCATTGCGGCTGGAAAGTTTCAGTTTATCTAATTC
ACATCTAAAAGTTTTTTAAGGATGTCACATATAAGTTCCCACAAATATATACAGTGCAGCAACAAGAAACAAAATAAAAC
TAGGACAAAACAAATAAATAAACCACAAATAGAGTGGACATCAACTTAGTTGTGATGTTTCCTAGACAGACCCATAAAGT
TTACCACGTCATCTACCTACCTTTTATTGTTAATTTTTACAGTTTTGCCA-----------ACTGAGACTTCGTTATGTC
TCTGTTGATTCTATATTCTTTTGATCTG---TGAAGATTCGTGCAGAAAAATTCATTTCAGTTTTTCCTTTTTTCTTCTG
ATGTACTAGTTGGAGTATATCACTTGACTGAGACTTGGTTAAGGGTAACTCGATTAAGATCTAGCTAGATATCAGTTGAC
TCAGACTTAACCAAGTCTCAATCAAGTAATATAATACTAGATAAATAGGAAATAGAAAACAACTAAAGAGAAAGTTTTG-
--------------------------------------CACGAATATATCATCTATTGAGACTTGACCAAGTCTCGGTCG
ATTGATATTTAGCAACACCGATTTTTTATATAACCAA--GTCGCCTGATATTATAAATTTAGGTAAGTCTTTTTTTGGAC
CCGTTGATTTTTTTTTGTCAAGATTTGTGCAGTTTTTTTTTCAGTGTTGTTTCATTACTGCTTACACTGTTTTTCTTTAA
CTC-----ACATTAGTTTTTGACTTGCCCTTGTTTGGGGAAAGTCAATTTTTTTCCTTAGGCTGAATTTTTGACTTGCCC
CTGTTTGGGTAAGTCAATTTTTCTATTGGGCTTGAAG
>chr3B_1275
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----------------------------ACGGGATCCAGCAGAGGAAGGCCTCGTGGCAGGACGGCATGCCGGGCGACAT
GTGCCCCATCCTGCCGGGCACCAACTTCACGTACAAGATGCAGTTCAAGGACCAGATCGGCACCTTCTTCTACTACCCCA
GCATCGGCATGCAGCGCGCCGCCGGAGCCTACGGGCTCATCAGCATTCACAGCCGCCCGCTCATCCCGGTGCCCTTCGAC
CCGCCGGCCGACGACTTCGGCGTCCTCGTCGGCGACTGGTACACCAAGGACCACACCGTGCTGGCCAAGAACCTCGACAC
CGGCAAGGGCATCGGCCGCCCCGCGGGGCTCCTCATCAACGGCAAGAACGAGAAGGACGCCTCCAACCCGCCCATGTTCA
ACGTGGAGGCCGGCAAGACGTACCGCTTCCGCGTCTGCAACGTGGGCATCAAGACCACCCTCAACGTGCGCATCCAGGGC
CACGTCCTCAAGCTGGTCGAGATGGAGGGCTCCCACACCGTGCAGAACGAGTACGACTCAATGGACGTCCACATCGGCCA
GTGCCTCTCCTTCCTCAGCACCGCCAACCAGAAGCCCGGGGACTACTTCTTCATCGCCTCCACCCGCTTCATCAAGGGGG
TCAGCACCATCACTGCCGTGATGCGCTACAAGGGGTCCAACACCCCGCCGGCGGCCAAGCTGCCCGACGCGCCGGACGGA
TGGGCCTGGTCCATCAACCAGTGGAGGTCCTTCCGCTGGAACCTGACGGCCAGCGCCGCCAGGCCCAACCCGCAGGGGTC
CTACCACTACGGGCAGATCAACATCACCCGCACCATCAAGCTCTCCAGCAGCCGCGGCAAGGTCGACGGCAAGGAGAGGT
ACGCCCTCAACGGCGTGTCCCACACCGACCCTGAGACGCCCCTCAAGCTCGCCGAGTACTTCAACGCCACCAAGGGAGTG
TTCGAGTACAACCTCGTCACCGACACGCCGCCCAAGGAGGGCACACCCATCAAGGTCGCCCCCAGCGTCATCACCGCGGA
GCACCGCACCTACATTGAGATTGTCTTTGAGAACCCCGAGAAGAGCATCGACACCTTCCACCTCAACGGCTACGCCTTCT
TCGCCGCCGGGTAAG-----------ACTACG------TAATTTCATGCAACTACTAAGCTGCATGCCT--------GAT
CATCGATCGGGTCTGTCTGACCGGTGG---ATGGATGGATG------------GGTGGATGCAGCATGGGACCGGGGCTA
TGGACGGTGGAGAGCAGGAAGACATACAACCTCCTGGACACGGTGAGCCGGCACACGATCCAGGTGTACCCGAGGTCGTG
GACGGCGGTGATGCTGACGTTCGACAACGCCGGGATGTGGAACTTGAGGTCCAATCTGTGGGAGAGGTACTACCTGGGGG
AGCAGCTGTACGTGAGCTGCACCTCGCCGGCCAGGTCGCTCAGGGACGAGTACAACATGCCCGACAATTCCCTCCGCTGC
GGCAAGGTCGTCGGCATGCCGCTGCCGCCGCCCTAC--------------------------------------------
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>chr3A_1275
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----------------------------ACGGGATCCAGCAGAGGAAGAGCTCGTGGCAGGACGGCATGCCGGGCGACAT
GTGCCCCATCCTGCCGGGCACCAACTTCACCTACAAGATGCAGTTCAAGGACCAGATCGGCACCTTCTTCTACTACCCCA
GCATCGGCATGCAGCGCGCCGCCGGGGCCTACGGGCTCATCAGCATCCACAGCCGCCCGCTCATCCCGGTGCCCTTCGAC
CCGCCGGCCGACGACTTCGGCGCCCTCGTCGGCGACTGGTACACCAAGGACCACACCGTGCTGGCCAAGAACCTCGACAC
CGGCAAGGGCATCGGCCGCCCCGCGGGGCTGCTCATCAACGGCAAGAACGAGAAGGACGCCTCCAACCCGCCCATGTACA
ACGTGGAGGCCGGCAAGACGTACCGCTTCCGCGTCTGCAACGTCGGCATCAAGACCACCCTCAACGTGCGCATCCAGGGC
CACGTCCTCAAGCTGGTGGAGATGGAGGGCTCCCACACCGTGCAGAACGAGTACGACTCCATGGACGTCCACATCGGCCA
GTGCCTCTCCTTCCTCACCACCGCCAACCAGAAGCCCGGGGACTACTTCTTCATCGCCTCCACCCGCTTCATCAAGGGGG
TCAGCACCATCACCGCCGTGATTCGCTACAAGGGGTCCAACACCCCGCCGGCGGCCAAGCTGCCGGACGCGCCGGACGGA
TGGGCCTGGTCCATCAACCAGTGGAGGTCCTTCCGCTGGAACCTGACGGCCAGCGCCGCCAGGCCCAACCCGCAGGGGTC
CTACCACTACGGCCAGATCAACATCACCCGCACCATCAAGCTCTCCCCCAGCCGCGGCAAGGTCGACGGCAAGGAGAGGT
ACGCCCTCAACGGCGTGTCCCACACCGACCCCGAGACGCCGCTCAAGCTCGCCGAGTACTTCAACGCCACCAAGGGAGTG
TTCGAGTACAACCTCGTCACCGACACGCCGCCCAAGGAGGGCACGCCCATCAAGGTCGCCCCCAGCGTCATCACCACCGA
GCACCGCACCTACATTGAGATTGTCTTCGAGAACCCCGAGAAGAGCATCGACACCTTCCACCTCGACGGCTACGCCTTCT
TCGCCGCCGGGTAAG-----------ACTACTA---ACTAATTTCATGGAACTGCTAAGCTGCATGCATGCCTCATGGAT
CATCGATCGGGTCTGTCTTCTGACCGGACCATGGATGGATG------------GATGGATGCAGCATGGGACCGGGGCTA
TGGTCGGTGGAGAGCAGGAAGACATACAACCTCCTGGACACGGTGAGCCGGCACACCATCCAGGTGTACCCGAGGTCGTG
GACGGCGGTGATGCTGACGTTCGACAACGCCGGGATGTGGAACTTGAGGTCCAATCTGTGGGAGAGGTACTACCTGGGCG
AGCAGCTATACGTGAGCTGCACCTCGCCGGCCAGGTCGCTCAGGGACGAGTACAACATGCCCGACAACGCCCTCCGCTGC
GGCAAGGTCGTCGGCATGCCGCTGCCGCCGCCCTAC--------------------------------------------
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>chr3D_1275
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----------------------------ACGGGATCCAGCAGAGGAAGGCGTCGTGGCAGGACGGCATGCCGGGCGACAT
GTGCCCCATCCTGCCGGGCACCAACTTCACCTACAAGATGCAGTTCAAGGACCAGATCGGCACCTTCTTCTACTACCCCA
GCATCGGCATGCAGCGCGCCGCCGGGGCCTACGGGCTCATCAGCATCCACAGCCGCCCGCTCATCCCGGTGCCCTTCGAC
CCGCCGGCCGACGACTTCGGCGTCCTCGTCGGCGACTGGTACACCAAGGACCACACCGTGCTGGCCAAGAACCTCGACAC
CGGCAAGGGCATCGGCCGCCCCGCGGGGCTCCTCATCAACGGCAAGAACGAGAAGGACGCCTCCAACCCGCCCATGTTCA
ACGTGGAGGAAGGCAAGACGTACCGCTTCCGCGTCTGCAACGTCGGCATCAAGACCACCCTCAACGTGCGCATCCAGGGC
CACGTCCTCAAGCTGGTGGAGATGGAGGGCTCCCACACCGTGCAGAACGAGTACGACTCGATGGACGTCCACATCGGCCA
GTGCCTCTCCTTCCTCAGCACCGCCAACCAGAAGCCCGGGGACTACTTCTTCATCGCCTCCACCCGCTTCATCAAGGGGG
TCAGCACCATCACCGCCGTGATGCGCTACAAGGGGTCCAACACCCCGCCGGCGGCCAAGCTGCCGGACGCGCCGGACGGA
TGGGCCTGGTCCATCAACCAGTGGAGGTCCTTCCGCTGGAACCTGACGGCCAGCGCCGCCAGGCCCAACCCGCAGGGGTC
CTACCACTACGGCCAGATCAACATCACCCGCACCATCAAGCTCTCCCCCAGCCGCGGCAAGGTCGACGGCAAGGAGAGGT
ACGCCCTCAACGGCGTGTCCCACACCGACCCCGAGACGCCGCTCAAGCTCGCCGAGTACTTCAACGCCACCAAGGGAGTG
TTCGAGTACAACCTCGTCACCGACACGCCGCCCAAGGAGGGCACGCCCATCAAGGTCGCCCCCAGCGTCATCACCGCCGA
GCACCGCACCTACATTGAGATTGTCTTCGAGAACCCCGAGAAGAGCATCGACACCTTCCACCTCGACGGCTACGCCTTCT
TCGCCGCCGGGTAAGCTACTACCACTAGTAACTAGTACTAATTTGATGGAACTACTAAGCTGCATGCATGCCTG-TGGAT
CATCGATCGGGTCTGTCTGACCGGACG---ATGGATGGACG------------GATGGATGCAGCATGGGACCGGGGCTA
TGGACGGTGGAGAGCAGGAAGACATACAACCTCCTGGACACGGTGAGCCGGCACACGATCCAGGTGTACCCGAGGTCGTG
GACGGCGGTGATGCTGACGTTCGACAACGCCGGGATGTGGAACTTGAGGTCCAATCTGTGGGAGAGGTACTACCTGGGGG
AGCAGCTGTACGTGAGCTGCACCTCGCCGGCCAGGTCGCTCAGGGACGAGTACAACATGCCCGACAACTCCCTCCGCTGC
GGCAAGGTCGTCGGCATGCCGCTGCCGCCGCCCTAC--------------------------------------------
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>SNPs
----------S--------------S--------SS---------------------------S--SSSSSSSSSS----
-------------------S---SS--------S-SSSSSSSSSSSSSSSS----------SSS----S---------SS
---S---S--SSS-SSS-SS---SSS-S--S------S--S--------S---S-----SS-------------SSS-S-
--------------S-------------------------S-------------S-SS------------S----S----
S---------------SSSS----SSSSSSSSSS-----S-------S------------SS-SSS-SSSSSS---S-SS
S-----------S-------------------------------S-------------S---------------------
-----------------------S----------------S----------------S----------------------
----------S-------------------------S----------S----------------S---------------
-------------S--------S---------------------------------------------------------
------------------------------------------------------------------S-------------
------------------------------------------------------SSSSSSS----------SSSS-----
-------------------------------S------------------------------------------S-----
----------------------------S---------------------SSS------------S--S-S------S--
----------------------------------S---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------S--------------S--
--------------------------------------------------------------------------------
------------------------S-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------S---------------
-------------------------S------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------S------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------S------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------S-------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------S-----S---SS------------------
---------------------------------------------------------------------S----------
---S---------------------------------------------------------------SS-----------
--------------------S------------SSSSSSSSSSSSS--------------S------------------S
---S------------------SS-------------------------------------SSSS-SSSSS---------
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------------------------------------------------------------S-------------------
-------------------------------------------------------------------------------S
---------------S-----------------S--------------------------------S-------------
S----S---S------------------------------S----------------S-SSS-----------------S
-----SSSS-SSS-----------------------------------S-SS----S-S-S-S-----S-S---------
-S---------------------------------S---------S-S------SSSSSSSSSSSSSSSS-SSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------S---S--------SS-----------S----
-S-S---------------S-S-----------SSSSSS-------------S----------------S----------
SSS-SS-----------------------SS-----S---S-SS---------S---S----------S----SS-SS--
SSSSSSSS------S--------------S--------SS--------------S-------------------------
---------------S-----S--------S------
>forward_663
--------------------------------------------------------------------------------
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---GCAGCTATAAGTCCCTGCCC---------------------------------------------------------
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>reverse_2142
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-------------------------------------------------------------ATCGACGGCAAGCTCAGGT
A-------------------------------------------------------------------------------
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>forward_1263
--------------------------------------------------------------------------------
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------------------------------------------CCTCCAACAACAACATCGTCG-----------------
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>reverse_3079
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------GCATGCATATGGGGGCTAGT----------------------
--------------------------------------------------------------------------------
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-------------------------------------
