>input_sequence_43824
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----------------------------------------------ATGGGTCTCTTGTCGCTCATCACTGGCAGGCCGG
GCGCGAGCGGGTTCGGGTCGGCGTCCACGGCGGAGCAGGTCACCGACGGCGTCGACGCCTCAAACCTCACCGTCATCATC
ACAGGTAA-AACACACAACACACCGCCGTCGTCGTGACGGCATGCAATGACGAAGTTTCACCCGAA--------------
--------------GTTCTGTCACAATCAATCCCTTTTGTGGCATGTTCGAAGGTTCCATTCAGGGCAAGGAAACTCTGA
GA----CTCGTGTTTTGTTCATTCACAGGAGGGCCTAGCGGGATCGGCCTGGAGACGTCGAGGGTCTTCGCCCTGAGAGG
AGCCCATGTCATCATCGCGGCGAGGAACACGGAGGCCGCGTCGGAGGCGAAGAAGAGCATAACGGAGGCGAACCCGACCG
CACGCGTCGACGTCCTGAAGCTCGACCTCAGCTCCCTCAAGTCCGTCAGGGCCTTCGCCGAGCAGTTCAACTCCATGAAC
CTCCCTCTCAACATCTTGATGTAACCAACCTG---CAACCCCTCCATCTCGATCTTATGATACTCCATTTTATTCTTCCG
TATGTATGCTGCTCTGAATAACCAAGCTGTCCAAAACCCTTGTGCTCTGCAGAAACAATGCAGGTGTGATGTTCTGCCCC
TTCCAGCTGTCCGAGGATGGCGTCGAGATGCAGTTCGCCACCAATCACCTAGGTATATATTGTCTCTGTTATATATAGCA
GTAGTAGTCAATACCTCAATATTTAGAGAACTGACAGTATCAGTATCC--------------------------------
-------------------------TGATACTAACATTTGTGTCATATATTATGATCAATCAGGTCACTTTCTGCTGACC
AACCTGCTGCTTGATAACATGAAAGCCACTGCTGAGTCTACGGGTATCGAGGGCCGCATCGTGAACCTGTCATCGATCGC
CCACGAGCATACCTATCCGAAGGGAATTCAGTTCGATAAACTCAATGACAAGAAAACGTATGG-TTCCTTATGATTCTTT
GGAGTTGGAGATCTATTGTCGGTTGAACTGTTACTGATGGTTTTTGCACTGGCAGATTCGACAGAAGGTCGGCCTATGGA
CAATCCAAGCTTGCCAACATACTACACGCTAAAGAGCTCTCTAGACGCCTCAAGGTATTA--------------------
----------------TTATTCAGAGGAAGATCAATGCTAAATAGAGGGCTCATACTAACTGGGAGTGTCTTAAAAAGTT
TCAAACTATTCTGACGCATCATAAACTTTATGT--TACTGAAACAGGAGGAAGGAGCTAACATCACGGTTAATTCCCTTC
ATCCTGGAGTAATCATGACCAATTTGATGAGGCACTCCTATGCTGTCATGAGTATGCTCCCCGGCTTATTTTTCTGTTCT
TGTGAATGTATTTGTCAAATGTCGTCAAGCTTTAGCTATGCACCATTTTCTGACAAGTTCCTTTATG--TCCACGGCGTT
ATTAATTTTCT------TTTTAACTTGCAGAGGCAATTCAAGTTGCCACTTGCTTGATCTGGAAGAATGTACCCCAGGTT
CTTCTCTACTCTTTACCTTCGAGTAACAAATATTTCATTGTGTACTTTCTTCTGAAATTTAACCTTGTCTAATAGAGGAT
GCCTTGCGGTTTCATTTTTCCAGGGAGCAGCAACCACCTGCTATGTAGGGCTCAGCCATCAGCTGAAGGGGGTTACAGGC
AAATACTTTGCTGACTGCAACGAGGAGAAGACGAGCAAATTGGCAGAGAGCGACGTCCTGGCGAAGCAACTCTGGGAGTT
CAGCGAAGAGCTGGTCAAGTCTGCGAGTCAGATATGA-------------------------------------------
--------------------------------------------------------------------------------
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--------------------------
>chr5B_1_TraesCS5B01G279400
TTTGGGATTTAAAAAAGATACAAATTGTGGAATTTTCGCGAATTCAATTATTTGCATGATTTCAACAAATGTTTGGGAAA
TGATAAATTATCATGGATTCAAAAAACTGTTCATTGAATTCAAAAACAGTTCTTGAATTCTAAAAATGTTCGAGATTTGA
AAAGAATGACCATTTTTTTGTTTTAACAATAAAAGATGAGCATTTTTAATAACTATGAACTTTTTTGTATTTGATGAACA
AATTTTAAATTCCATGAACATTTTTTTGATATTGATAACAAAATTTGTACTCAAGAACATTTATTTTATGAAAACTGGAT
GAACATTTTTTATATCAATGAACAAAGTTAGAATTTGATGAACATTTTTTAAATTCGATGGACAATTTTTGGATTTTGAT
GAATATTTTGAAAAATCTATGAACAAAATACTGAATTTGATGAACGTTTTTTAAAATTGTTTAACTTTTCTACATTGGTG
AACATTTTTGAAATCGATGGGAAAAATGTCCACAAATTTGAAAAGGAAATTCGCAAAAATATGCAAAATTAAAGAAGAAA
AAGAGAAAAGGAAAAGTAAAACAGGAAAAAAAAGAGGAAATAAAAATAAATAAAAAACCGGAAATTGGGCTGGCCCATAC
GAACGGCCAGCGCGCCATATAGGATCCCCC----GCCCGTGCTGGCAGGAACAACGAAATGTATAAACTAACACTGTCGG
ACGGCTTTTCTCCAGGTGGACTA--AGAAGGATTAGCGAATCAGCAGACAAAAGTGATCTTCCCATCGATCAATCCGTCG
GGTGGATGAGGCTCGATGATGCCCAGAATGATGCTCGTCGACTGCCTCTTGTTCTTGGGGGCTCAAATTTTGTTCTTGTC
TTCTTGTTCTGTTATAGCAGTGTTTTTGACCTGTTCCACGCTTATGCTGTTAAATGTGCATGCCGCATATGTTACTCCTA
CCACATCACGAGCTTTCTTTTAGTGTTGGGAGCTGAGAAACATCAGATGGGTCTCTTGTCGCTCATCACTGGCAGGCCGG
GCGCGAGCGGGTTCGGGTCGGCGTCCACGGCGGAGCAGGTCACCGACGGCGTCGACGCCTCAAACCTCACCGTCATCATC
ACAGGTAA-AACACACAACACACCGCCGTCGTCGTGACGGCATGCAATGACGAAGTTTCACCCGAA--------------
--------------GTTCTGTCACAATCAATCCCTTTTGTGGCATGTTCGAAGGTTCCATTCAGGGCAAGGAAACTCTGA
GA----CTCGTGTTTTGTTCATTCACAGGAGGGCCTAGCGGGATCGGCCTGGAGACGTCGAGGGTCTTCGCCCTGAGAGG
AGCCCATGTCATCATCGCGGCGAGGAACACGGAGGCCGCGTCGGAGGCGAAGAAGAGCATAACGGAGGCGAACCCGACCG
CACGCGTCGACGTCCTGAAGCTCGACCTCAGCTCCCTCAAGTCCGTCAGGGCCTTCGCCGAGCAGTTCAACTCCATGAAC
CTCCCTCTCAACATCTTGATGTAACCAACCTG---CAACCCCTCCATCTCGATCTTATGATACTCCATTTTATTCTTCCG
TATGTATGCTGCTCTGAATAACCAAGCTGTCCAAAACCCTTGTGCTCTGCAGAAACAATGCAGGTGTGATGTTCTGCCCC
TTCCAGCTGTCCGAGGATGGCGTCGAGATGCAGTTCGCCACCAATCACCTAGGTATATATTGTCTCTGTTATATATAGCA
GTAGTAGTCAATACCTCAATATTTAGAGAACTGACAGTATCAGTATCC--------------------------------
-------------------------TGATACTAACATTTGTGTCATATATTATGATCAATCAGGTCACTTTCTGCTGACC
AACCTGCTGCTTGATAACATGAAAGCCACTGCTGAGTCTACGGGTATCGAGGGCCGCATCGTGAACCTGTCATCGATCGC
CCACGAGCATACCTATCCGAAGGGAATTCAGTTCGATAAACTCAATGACAAGAAAACGTATGG-TTCCTTATGATTCTTT
GGAGTTGGAGATCTATTGTCGGTTGAACTGTTACTGATGGTTTTTGCACTGGCAGATTCGACAGAAGGTCGGCCTATGGA
CAATCCAAGCTTGCCAACATACTACACGCTAAAGAGCTCTCTAGACGCCTCAAGGTATTA--------------------
----------------TTATTCAGAGGAAGATCAATGCTAAATAGAGGGCTCATACTAACTGGGAGTGTCTTAAAAAGTT
TCAAACTATTCTGACGCATCATAAACTTTATGT--TACTGAAACAGGAGGAAGGAGCTAACATCACGGTTAATTCCCTTC
ATCCTGGAGTAATCATGACCAATTTGATGAGGCACTCCTATGCTGTCATGAGTATGCTCCCCGGCTTATTTTTCTGTTCT
TGTGAATGTATTTGTCAAATGTCGTCAAGCTTTAGCTATGCACCATTTTCTGACAAGTTCCTTTATG--TCCACGGCGTT
ATTAATTTTCT------TTTTAACTTGCAGAGGCAATTCAAGTTGCCACTTGCTTGATCTGGAAGAATGTACCCCAGGTT
CTTCTCTACTCTTTACCTTCGAGTAACAAATATTTCATTGTGTACTTTCTTCTGAAATTTAACCTTGTCTAATAGAGGAT
GCCTTGCGGTTTCATTTTTCCAGGGAGCAGCAACCACCTGCTATGTAGGGCTCAGCCATCAGCTGAAGGGGGTTACAGGC
AAATACTTTGCTGACTGCAACGAGGAGAAGACGAGCAAATTGGCAGAGAGCGACGTCCTGGCGAAGCAACTCTGGGAGTT
CAGCGAAGAGCTGGTCAAGTCTGCGAGTCAGATATGAAAGCAGGCGAGAGAAAGGCATAGTAGGAACCTACCG---CATG
CATAGTGAAG-------------TAACAAATTTTCGCGCTTGTTGTTTGGATCATGATCTAAGAT--------CAGTATG
CACCCTGGTTAAATTTCTCTAAT----GTATTTGCCGATCGGTTCTCGATTGGGTTAATGCCTTAATGGGACTGGTATAT
GTTATCCTAGTTTCAGATTTCTGTTGCCTGAAATATATCACCCAAGTTTCAGATTTATTTTGGTGTTGACCGAAACCTTT
TTGGTATAGAGGGAAAAGCACGTCCGGCTATCGTCGTAGAGTGATTTCGGGACTGATGGAGTCCCCGGTGGGGGCATGTC
TTGCTCAGCGTCATTATGAGCTTCGGGTCTCTGGCAGGCAGCCATCTGCAACAAAGAAAGTGGGAAGGGAAAGGCTCAGC
TCTGCTGATGCTCCCC-TGCTTATCATGCCAGCCCCTGGATCGAATCGCCAGCATAGACGATACCGATCTAATATCAAAC
ATAAATGTATCATACCATTACATCGCAATAATCTAGAATTAACATAAGTCTTACAAACCACTATCAGAGGTTAGCCAAAT
GAATAATCTTACGAGCATAAAGAGTTCACCAAAGTGGAAACATAAGCAAATCCTAATGAAGTAGTTTCTGGTAGAGCTCC
ATCTACGCCATGAGGAACCATGTTAAGTGGATGCACGTAGCCGTACACAAGTCACTCCTCGAAGTAGTCACCTGCAACAT
GATACGTTGCAGCCGCTAGGCATCAATACATTTAATGTATGGGCAAGTTTCACAAGAATTATAACAGTCCTATCTCACCT
ACATGCTTTTCGAATAAGTGGAAATTTGGCTCCATTTTCATAAAGCGATAGTTTTATACAATCTTCGTATATAAGTGGAT
CTACTCTATACATAGGACACACTACATCTCACAACAATCCGTAGCATACTTGGATCCACGGCATCTCACAACAGCCCTCG
ACCTTTAGCCCACTAGTTTGACCAAT
>chr5A_651
--------------------------------------------------------------------------------
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----------CGCGCCAAATAGGAGCTCCCCCGTGCCCGTGCTGGCAGAAACAACGAAATGTATAAACTAACACGATCGG
ACGGCTTTTCTCCAGGTGGACTA--AGAAGGATTAGCGAATCCGCAGACAAAACTAATCTTCCCATCGATCAATCCGTCG
GGTGGATGAGGCTCGATGATGCCCAGAACGATGCCCATCGACTACCTCTTGTTCTTGGGGGCTCAATTTTTGTTTTTGTC
TCCTTGTTCTGTTATAGCAGTGTTTTTGACCTGTTCCACGCTTACGCTGTTAAATGTGCATGCCGCATATGTTACTCCTA
CCACATCACGAGCTTTTTTTTAGTGTTGGGAGCTGAGAAACATCAGATGGGTCTCCTGTCGCTCATCACCGGCAGGCCGG
GCGCCAGCGGGTTCGGGTCGGCGTCCACGGCGGAGCAGGTCACCGACGGCGTCGACGCCTCGAACCTCACCGTCGTCATC
ACAGGTAACAACACACAACACACCGCTGTCGTCGTCCCGGCATGCAGTGAGGAACTTTCACCCGAAACCATCAATTTGTT
GGAGTAAACTTCAAGTTCTGTCACAATCAGTCCCTTTTGTAGCATGTTCGAAGGATCCATTCAGGGCAAGGAAACTCTGA
AAGAAACTCGTGTT----TTATTTACAGGAGGACCTAGCGGCATCGGCCTGGAGACGTCGAGGGTCTTGGCCCTGAGAGG
AGCCCATGTCATCATCGCGGCGAGGAACACGGAGGCCGCGTCGGAGGCGAAGAAGAGCATAACGGAGGCGAACCCAGCCG
CCCGGGTCGACGTTCTGAAGCTCGACCTCAGCTCCCTCAAGTCCGTCAGGGCCTTCGCCGAGCAGTTCAACTCCATGAAC
CTCCCTCTCAACATCTTGATGTAACTAACGGAGCG------CTTCATCTCGATCTTATGATACTCCATTTTCTTTTTCCA
TATG--------------TAACCAAGCCGTCCAAAAACTTTGTGCTCTGCAGAAACAATGCAGGTGTGATGTTCTGTCCC
TTCCAGCTCTCCGAAGATGGGGTCGAGATGCAGTTCGCAACCAATCATCTTGGTATATATTGTCTCGACACAGCGGTGGT
TATCTATC------------------------------------------------------------------------
----------------TATCTTTTTTGATACTGATATTTGTCTCTCTTGTTATGATCAACCAGGTCACTTTCTGCTGACC
AACCTGCTGCTTGATAACATGAAAGCCACTGCTGAGTCTACGGGCATCGAGGGCCGCATCGTGAATCTGTCATCGATCGC
CCACGAACATACTTATCCGAAGGGGATTCAATTCGATACACTCAATGACAAGAAAACGTATGGGTTTCTTGTGGTTCTTT
GGAATTGGAGAAGATC------TTGAACTGTTACTGATGGTTTTTGCACTGGCAGATTCGACAGAAGGTCGGCCTATGGA
CAATCCAAGCTTGCGAACATACTACACGCTAAAGAGCTCTCTAGACGGCTCAAGGTATTCTTTTCCTCTCTCCATATTTT
CGCCTATTACCTT-ATTTATTCAGAGGAAGATCAATACTGAATAGAGGGCTCTTACTAATTGAGAGTGTCTTAAAAAGTT
TCAAACTATTCTGAACCACCATAAACTGTATGT--TACTGAAACAGGAGGAAGGAGCTAACATCACGGTTAATTCCCTTC
ATCCTGGAGTAATCATGACCAATTTGATGAGGCACTCCTATGCTGTCATGAGTACGCTCCCCGGCCCATTTTTCTGTTCT
TTTGAATGTATTTGTCAAATGTCATCAAGTTTTAGCTATGCGCCATTTTATGGCAAGTGCCTTTATGGCTCCACGGCGTT
ATCAATTTCCT------ATTTAACTTGCAGAGGCAATTCAAGTTGCCACCTGCTTGATCTGGAAGAATGTACCCCAGGTT
CTCCTCTACTCTTG-CCTTCAAGTAACGAATATTTCGTTGTGTAGTTTCTTCTG-AATTTAACCTTGTCTAATAGAGGAT
GCCTTGCGGTTTCAT--TTCCAGGGAGCAGCAACTACCTGCTATGTAGGGCTCAGCCATCAGCTGAAGGGAATCACAGGC
AAATACTTTGCTGACTGCAACGAGGAGAAGACGAGCAAATTGGGAGAGAGCGACGTCTTGGCGAAGCAACTCTGGGAGTT
CAGCGAAGAGCTGGTCAAGTCTGCGAGTCAGATCTAAAAGCAGGCGAGAGAAAGGCGTAGTAGGAACCTACCG---CATG
CATGGTGAACCAGTGTCGTTCATTAACAAATTTTCGTGCTTGTTGTTTGGATCGTGACCTAAGAGGCTAAGACCAATATG
CACCCTGGTTAAATTTCTCTAAT----GTATCTGCCGATCTGTTCCGGATTGGGTCAATG--------GGACTGGTATAT
GTCATCCTAGTTTCAGATTTCTGTTGCCTGAA--ATATCACCCAAGTTTCAGAGATATTTTGGTGTTGCCTAATACTT--
----------------------------TATCGTCCTAGAGTGATTTCGGGACTGATGGAGTCCCCGGTGCGGGCACGTC
CTGATTAGGGTCATTATGAGCTTCGGGTCTCTGGCAGGCAGCCAGATGGATGCTATT---------------------GC
TCTGCTGATGCTCCCCGTGCTTATCGTGCCGGCCCCTGGATCGAATCGCCAGCATAGACGATACCGATCTAATATCAAAC
ATGTATCGTCCA---------ATCGCAATAATCTAGAATTAACATAAGTCTTACAAACCACTATCAGAGGTTAGCCAAAT
GAATAATCTCACAAACTCAAAGAATTCACAACAATGAAAACATAAGCAAATCCTAATGAAGTAGTTTTTGGTAGAGCTCC
ATCTACGTCACGAGGAACCATGTTGAGTGGATGCACGTAGCCGTACGTAAGTCACTCCTCGAAG-AGTCACCTGCAACAT
GATATGTTGCAGCCACTAGACATCTATAGATTTAATGTATGGGCAGGTTCCACAAGAATTATAACAGTCATATCTCACCT
ACATGCTTTTCAAGTAAGTGAAAATTTGGCTTAGTTTGCGTAAAGCGATAGTTTTATACAATCTTCATATATAAGTGGAT
CTACTCTATACATAGGACACACTACATCTCACAACAATCCGCAGTATACTTGGGTCCACGGCATCTCACAACAACCCTAG
ACCTTTAGCCCACTAGTTTGACCAAT
>chr5D_693
AAATG---------------------------------------------------------------------------
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------------------------------------------------------------GTATAAACTAACACGATCAG
ACGGCATTTCTCCAGGTGGTGACCGAGAAGGATTAGCGAATCCGCGGACAAAAGTGATCTTTCCATCGATCAATCCGTCG
GGTGGATGAGCCTCGATGATGCCCAGAACGATGCTCATCGACTAGCTCTTGTTCTTGTGGGCTCAAATTTTGTTTTTGTC
TCCTTGTTCTGTTATAGTAGTGTTTTTGACCAGTTCCTGGCTTACGCTGTTAAATGTGCATGCCGCATATGTCACTCCTA
CCACATCACGAGCTTGCTG---GTGTTGGGAGCTGAGAATCATCAGATGGGTCTCCTGTCGCTCATCACCGGCAGGCCGG
GCGCCAGCGGGTTCGGGTCGGCCTCCACGGCGGAGCAGGTCACCGACGGCGTCGACGCCTCAAACCTCACCGTCGTCATC
ACAGGTAACAACACACAACACACCGCTGCCGTCGTCCCGGCATGCAGTGACGAAGTTTCACCCGAAACCATCAATTTGTT
GGAGTAAACTTCAAGTTCTGTCACAATCAATCCCTTTTGTAGCATGTTCGAAGGATCCATTCAGGGCTAGGAAACTCTGA
AA----CTCGTGTC----TCATTTACAGGAGGGCCTAGTGGCATCGGCCTGGAGACGTCGAGGGTCTTGGCCCTGAGGGG
AGCCCATGTCATCATCGCGGCGAGGAACACGGAGGCCGCGTCGGAGGCGAAGAAGAGCATAACGGAGGCGAACCCTGCCG
CCCGCGTCGACGTTCTGAAGCTCGACCTCAGCTCCCTCAAGTCCGTCAGGGCCTTCGCCGACCAGTTCAACTCCATGAAC
CTCCCTCTCAACATCCTGATGTAACCAAAACCAGCCAACCCCTTCATCTCGATCTTATGATACTCCATTTTCTTCTTCAT
G-TGTACGCTGCTCTGAATAACCAAGCCGTCCAAAACCCTTGTGCTCTGCAGAAACAATGCAGGTGTGATGTTCTGTCCC
TTCCAGCTATCCGAGGATGGCGTCGAGATGCAGTTCGCCACCAATCACCTAGGTATATATTGTCTCGGCACAGCGGTAGT
TATCTACTGCCTCTGTAAACTAATATAAGAGCGTTTAGATCACTACTTTAGTGATCTAAACGCTCTTATATTAGTTTACG
GAGGGAGTATCTACAGTATCTTTTTTGATACTGATATTTGTCTCTCTTGTTATGATCAATCAGGTCACTTTCTGCTGACC
AACCTGCTGCTTGACAACATGAAAGCCACTGCTGAGTCTACGGGTATCGAGGGCCGCATCGTGAACCTGTCATCGATCGC
CCACGAACATACCTATCCGAAGGGGATTCAGTTCGATACACTCAATGACAAGAAAACGTATGGGTTTCTTGTGGTTCTTT
GGAATTGGAGAAGATC------TTGAACTGTTACTGATGGTTTTTGCACTGGCAGATTCGATAGAAGGTCGGCCTATGGA
CAATCCAAGCTTGCAAACATACTGCACGCTAAAGAGCTCTCCAGACGGCTCAAGGTATTATTT----CTCTCCAAATTTT
CGCCCTTCTACCTCATTTATTCAGAGGAAGATCAATGCTAAATAGAGGGCTCATACTATTTGGGAGTGTCTTAAAAAATT
TCAAACCATTCTGACCCATCATAAACTGCATGT--TACTGAAACAGGAGGAAGGAGCTAACATCACGGTTAATTCCCTTC
ATCCTGGAGTAATCATGACCAATTTGATGAGGCACTCCTATGCTGTCATGAGTACGCTCCCCGGCTCATTTTTCTGTTCT
TGTGAATGTATTTGTCAAATGTC---AAGTTTTAGCTATGCACCATTCTCTGGCAAGTGCCTTTATGTCTCCACGGCGTT
ATGAATTTTCT------TTTTGACTTGCAGAGGCAATTCAAGTTGCCACTTGCTTGATCTGGAAGAATGTACCCCAGGTT
CTTCTCTACTCTTTACCTTCGAGTAACAAATAGTTCATTGTGCACTTTTTTCTGTAATTTAACCTTATCTAATAGAGGAT
GCCTTGCGGTTTCAT--TTCCAGGGAGCAGCAACCACCTGCTATGTAGGGCTCAGCCATCAGTTGAAGGGAGTTACAGGC
AAATACTTTGCTGACTGCAACGAGGAGAAGACGAGCAAATTGGCAGAGAGCGACGTCTTGGCGAAGCAACTCTGGGAATT
CAGCGAAGAGCTGGTCAAGTCTGCGAGTCAGACCTGAAAGCAGGCGAGAGAAAGGCATAGTAGGAACCTACTACCACATG
CATGGTGAACCAGTGTCGTTCATTAACAAATTTTCGTGCTTGTTGTTTGGATCGTGGCCTAAGAT--------CAATATG
CACCCTGGTTAAATTTCTCTAATTAATGTATTTGCCGATCGGTTCTCGATTGGGTTAATG--------GGACTGGTATAT
GTCGTCCTAGTTTCAGATCTCTGTTGCCTGAA--ATATCACCCAAATTTCAGAGATATTTTGGTGCTGCCTGAAACTT--
----------------------------TTTCGGTATAGAGAGAAAAACACGCCCAGCTATCGTCGTAGAG---------
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>chr3D_2192
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-------ATTCTGATGCACCATGAATAATGTGCTGTACTTACACAGGAGGAAGGAGCTAACATCACAGTTAATTGCGTTC
ATCCTGGATTGATCATGACCAATTTGATGAGGCATTCCTTTGCTCTCATGAGTAAGCTCTCATGCTCATTTTTCCTTGTG
AATGAATATGATTCTTAAATGTC---AAGCTTTA-----------------------------TATGTCCCCACGGCGTT
ATAATTTATTTATTCTGTTTTCATTTGCAGAGGCAATTCAAGTTGTCACCTACTTGTTCTGGAAGAATGTACCCCAGGTT
CTTATCTATTCCTG-GCTTTGAAAAAATTCCTAATCCTAAGAATGACACGGCATCTTCCTTACAAAGAACTTTGTGTTTT
TACC-------------TTGCAGGGAGCGGCAACTACTTGCTACGTAGGGCTCAACCCTCAGCTGAAGGGTGTGACAGGC
AAATACTTTGCCGACTGCAACGAGGAGAAGACGAGCAAGCATGCGAAGAGCGACGTCTTGGCGAAGCAACTCTGGGAGTT
CAGCGAGGAGCT--------------------------------------------------------------------
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--------------------------
>SNPs
SSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSS-------S------S-S---------------------S-------------------------SS----
------------------------------------------S-------------------------------------
----------------------------S-------S------S------------------------------S-----
-S------------------------------------------S-----------------------------------
-------------------------------------------------------S-------------S----------
----S---------------------------------------------------------------------S-----
--------------------------S--------SS---------S---------------------------------
----------------------------------------S-------------S-------------------------
S-------------SSSS-----S-----------------S--------------------------S-----------
---------------------------------------------------------------------------SS---
-S-----------S------------------------------------------------------------------
-----------------------------SSS-----------S---------------------------S-------S
------S--------------------S------------------------------------------------S---
--------S---------------------------------------------------------S-SSSSSSSSS-SS
SSSS--S-SSS-SSS-S--SSSS--S-SS-SS-SSSSS----S--SSS--------------------------------
--------------------------------S-S------S--SSS-S-------------------------------
--------------------------------------------------------------------------------
------S-----------------S-------------S---------------------------S---S--S------
---S-------SSSSSSSSSSS----------------------------------------------------------
--------------S--------------------------------S--------------------------------
-----------------------------------------------------------S--------------------
---------------------------S----------------------------------------------------
------------------------------------------------------S-----------S-------------
-----------------------S----------------------------S-----S---------------------
--S-----------------------------------------------------------------------------
------------------------------------------------------S-------------------------
---------------SS-----------------------------------------------------S---------
---------------------------------------------------------S----------------------
---------------------------------S----------------------------------------------
---S-----S--------------------------S----------------S---S-----------------S----
------------------------------------------------------------SSSSSSSS------------
--S-----------------------------SS-------------------SS-------------S-S-----S-SS
SSSSSSSSSSSSSSSSSSSSSSSSSSSS-------S----------------------------------------S---
S--S-S--S-----------------------------------SS--S-SSSS-SSSSSSSSSSSSSSSSSSSSSSS--
-------------------------S----S-------------------------------------------------
--SS--SSSS--SSSSSSSSS-----------------------------------------------------------
---------S--S-S-SS-----S-----S-S-S--S------------------------------S------------
-------S--S-------------S---------------------SS----------------S---------------
----S---------S----S----S---S----------------S---S-------------------S----------
-----------S-S------S----------SSS---S-S--------------------------S-------------
-----------------------------------------S--S--------S-------------------S----S-
--------------------------
>forward_829
--------------------------------------------------------------------------------
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---------GGCTCGATGATGCCCAGAAT---------------------------------------------------
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>reverse_2539
--------------------------------------------------------------------------------
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----------------------------------------------------------TCCTTTATGTCCACGGCGTT--
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--------------------------
>forward_1147
--------------------------------------------------------------------------------
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-------AAAACACACAACACACCGCC-----------------------------------------------------
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>reverse_3207
--------------------------------------------------------------------------------
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------TAGAGGGAAAAGCACGTCCG------------------------------------------------------
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--------------------------
