>input_sequence_43808
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------ATGCGGACAAAGATGGCATTGCGCGTGCCGCAGATGCGTCCAGCCTTGGAGAGACCCGAGGTGACACAAGAGAC
AAGCTCACCACATCGGAAGGTATGAACTCGAGGCCTCACCATTTTTGTTGCTTCGAACAAGACAACGGGGTCGAACAATG
CCCATGGCTT-GACTCACCCGATAACCTTAATTACTCTCTGCAGGGAGTGGAACCGCGCACTTGGGGTGGGATAGCATCC
ATCATGTTCCAGCAGCAGCA------------GCCGCAGCCGCAGCCGCAGCGCCAGCAGCAGCAGGAGGACGTGATGTC
GTCGGCGACGTCGTCGCCTGCGTCCACGCTGTACTCTCCCATGCCGTACGCTTTCGCGGGGACGTCGGTGCAGGAGCTGA
GCTCGGACCAGTGCAGCGTGCGCCTCATCAGCCTGCTGTACCAGTGCGCCTCCGAGGTGGCCGCCGGCGAGTTCGACCGC
GCTAACCTCTGCCTGGAGCACATCATGCAGCTCGCGTCGCTGGACGCGCCTCACACGCTGCAGCGCCTCGCCGCCGTCTT
CGCCGACGCGCTGGCCTGCAAGCTGCTCAAGCTCCTGCCGGGCCTCTCGCGGGCGCTCCTGTCGTCTTCGAGCTCCGACG
ACGCCCACCTCGTCCCGGCCGCGCGCCGCCACATGTTCGACATGCTCCCGTTCCTCAAGCTCGCGTACCTCACCACCAAC
CACGCCATCGTCGAGGCCATGGAGGGTGAGCGGTTCGTCCACGTCGTCGACCTCTCCGGCCCTGCCGCCAACCCCGCGCA
GTGGATCGCGCTGTTCCACTCGTTCCGCGGCCGGCGCGACGGCACGCCAAATCTCCGCATCACCGCCGTCCATGAGAGCA
AGGAGTTCCTGGCTGGCATGTCCGCGGTGCTCGTCAGGGAGGCCGAGGCGTTCGACATCCCGTTCCAGTTCAACGCTGTG
GAGGCGCGGCTCGAGGACATGGACTTCGACGCGCTCCGGCACAACCTCCGCGTCAGGTCCGGCGAGGCGCTCGCGGTGAG
CGTCGCGCTACAGCTGCACCGCCTCCTCGCGGCCGACGACACCGGAGGCAGGCGGCAGGGCGGCCTCACCCCGCTCCAGA
TCATCGCGCGGTCCAGCCCGAGCAGCTTCGGGGAGCTCCTGGAGCGGGAACTGAACACGCGGCTACAGCTGAGCCCCGAC
GCGTCCGCGTTCTCCTCCATGTCGCCGCAGTCCCCGATAGGCGGCCACTTCCCCGCCGTAGGGCAGCAGAGGCCCAAGAT
CGGGTCCTTCCTGTCGGCGGTGAAGGCGCTGTCTCCCAAGATCATGGTGGTGACGGAGCAGGAGGCGAACCACAACGGGG
CGGCGTTCCACGAGAGGTTCGACGAGGCGCTCAACTACTACGCATCGCTGTTCGACTGCCTGGAGCGCGCGGCGGCGGCG
CAGCGGGGCAGCGCGGCGGCGGAGCGGGCGCGGGTGGAGCGGTCGGTGCTGGGGGAGGAGATCAGGAGCATCGTGGCGTG
CGAGGGCGGGGAGCGGAAGGAGCGGCACGAGCGGGCGCGGCAGTGGGCGGGGAGGATGGAGGCGGCGGGGATGGAGCGGG
TGGGACTGAGCTACAGCGGCGCCATGGAGGCGAGGAAGCTGCTGCAGAGGAGCGGGTGGGGCGGGTACGAGGTGAGGCAC
GACGCCGAGGGGCACTGCTTCTTCCTCTGCTGGCACAAGAAGCCGCTGTACGCCGTCACCGCGTGGAGGCCGGCGGGGTA
CCACCACTCCGGCGGCGCCAGGTCCAGGTGA-------------------------------------------------
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>chr5A_1_TraesCS5A01G135000
GGTGATGATTGCAAGATCGTGGTGGCGCACGTTCGTGGGTGGCTTGTCTGGTGGAGCGCGTCGGACCGTTCGGGGT-GTG
GGTGTTTGGCGGATGGGAGAAATCTGGGCCGGCTTGCCGGCACCGACGCGGTGACGCCCGTGGGCGCCATCGTTCCTTCC
TGAAGGGCGTCGGGTCTTCCCCTTCCCCACACCCCTCCGTGTACCGGGGGAAACCCTAGGACCTGTCCGGGCAGCAA---
CGTCGTCGTC------GTGTTCCTTCTTGAAGGTGCTGCTTGGTATGCGGAGGTTCGAGGTGCCTGGAGCGAGGTGGCAC
ATCTCTGGTAGGCACAACGGTTTTGGGTTATCATCGTTTTCGTCGATCTGACGCTGTTGACTTTATTTTCTCTCTTCTTT
CTCTTTTGTTTTTT-TGGGCATGCTTGTGTTGTTTGCCTCAGCATTGGACTCTTTATTGTATTGGGTGGTTGCTATATCA
ATATAGCGGGGCGAAAGCTTTTTTCTTAAGAATCGACTG-CCTCAATTTGAAATTCAGTCGACTGCCATTTAGCTAATGT
GACTAAATAGACTAACCTCGTGTTGAATTTCTTCAAAAGAAAAATGGATTGAAAGATTCCGTAGGAATTTAATAGGAATC
GTATCAACGTTTTCATTTGTTCCAAAGGGTTTACACTTGTATGCCCAATTTTGTTGCTGAGAAGAAAAGACCCTCACAAT
ATGACCCATGACACACCTTTCATCTACCCTGCAAAAG--AAAGGCACACCTTTCATCTTATTTATCATGTAGGAGTATAA
A-------------------------------------------------------------------------------
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---------------------------------AAAAAAGGGAGCGGCAGATTTATGACAAAATTTTAAGCCAACAGACG
CTATCGAAAACAGTCACGCACTTTGTTTGGTTGTGTAGGGCGCGGTTGCAGGGACGTAACCTGAAACAGAATGGTTTGAT
CACAAGCTTGTCTTGTACCTTGCGACCCAAACCTCGGGGATGAATTCCAAGAGAATAATCTCAATCTTCTCAGTTACTCC
ACCGAGATGCGGACAAAGATGGCATTGCGCGTGCCGCAGATGCGTCCAGCCTTGGAGAGACCCGAGGTGACACAAGAGAC
AAGCTCACCACATCGGAAGGTATGAACTCGAGGCCTCACCATTTTTGTTGCTTCGAACAAGACAACGGGGTCGAACAATG
CCCATGGCTT-GACTCACCCGATAACCTTAATTACTCTCTGCAGGGAGTGGAACCGCGCACTTGGGGTGGGATAGCATCC
ATCATGTTCCAGCAGCAGCA------------GCCGCAGCCGCAGCCGCAGCGCCAGCAGCAGCAGGAGGACGTGATGTC
GTCGGCGACGTCGTCGCCTGCGTCCACGCTGTACTCTCCCATGCCGTACGCTTTCGCGGGGACGTCGGTGCAGGAGCTGA
GCTCGGACCAGTGCAGCGTGCGCCTCATCAGCCTGCTGTACCAGTGCGCCTCCGAGGTGGCCGCCGGCGAGTTCGACCGC
GCTAACCTCTGCCTGGAGCACATCATGCAGCTCGCGTCGCTGGACGCGCCTCACACGCTGCAGCGCCTCGCCGCCGTCTT
CGCCGACGCGCTGGCCTGCAAGCTGCTCAAGCTCCTGCCGGGCCTCTCGCGGGCGCTCCTGTCGTCTTCGAGCTCCGACG
ACGCCCACCTCGTCCCGGCCGCGCGCCGCCACATGTTCGACATGCTCCCGTTCCTCAAGCTCGCGTACCTCACCACCAAC
CACGCCATCGTCGAGGCCATGGAGGGTGAGCGGTTCGTCCACGTCGTCGACCTCTCCGGCCCTGCCGCCAACCCCGCGCA
GTGGATCGCGCTGTTCCACTCGTTCCGCGGCCGGCGCGACGGCACGCCAAATCTCCGCATCACCGCCGTCCATGAGAGCA
AGGAGTTCCTGGCTGGCATGTCCGCGGTGCTCGTCAGGGAGGCCGAGGCGTTCGACATCCCGTTCCAGTTCAACGCTGTG
GAGGCGCGGCTCGAGGACATGGACTTCGACGCGCTCCGGCACAACCTCCGCGTCAGGTCCGGCGAGGCGCTCGCGGTGAG
CGTCGCGCTACAGCTGCACCGCCTCCTCGCGGCCGACGACACCGGAGGCAGGCGGCAGGGCGGCCTCACCCCGCTCCAGA
TCATCGCGCGGTCCAGCCCGAGCAGCTTCGGGGAGCTCCTGGAGCGGGAACTGAACACGCGGCTACAGCTGAGCCCCGAC
GCGTCCGCGTTCTCCTCCATGTCGCCGCAGTCCCCGATAGGCGGCCACTTCCCCGCCGTAGGGCAGCAGAGGCCCAAGAT
CGGGTCCTTCCTGTCGGCGGTGAAGGCGCTGTCTCCCAAGATCATGGTGGTGACGGAGCAGGAGGCGAACCACAACGGGG
CGGCGTTCCACGAGAGGTTCGACGAGGCGCTCAACTACTACGCATCGCTGTTCGACTGCCTGGAGCGCGCGGCGGCGGCG
CAGCGGGGCAGCGCGGCGGCGGAGCGGGCGCGGGTGGAGCGGTCGGTGCTGGGGGAGGAGATCAGGAGCATCGTGGCGTG
CGAGGGCGGGGAGCGGAAGGAGCGGCACGAGCGGGCGCGGCAGTGGGCGGGGAGGATGGAGGCGGCGGGGATGGAGCGGG
TGGGACTGAGCTACAGCGGCGCCATGGAGGCGAGGAAGCTGCTGCAGAGGAGCGGGTGGGGCGGGTACGAGGTGAGGCAC
GACGCCGAGGGGCACTGCTTCTTCCTCTGCTGGCACAAGAAGCCGCTGTACGCCGTCACCGCGTGGAGGCCGGCGGGGTA
CCACCACTCCGGCGGCGCCAGGTCCAGGTGATGGATGAGTGGAGCGTGTCTC---CT---CGTGTGCCGCATGTACCCTG
CTGTCTCTCTCTAATTCAGGTGTGTTAATTTGACTGTGGATTGGGCTGGATGAACAGTTTTTCTTTTCTTTTTTTGAAAA
AAAGCCTCGGGATTTTTGGATAAAGGACGCTTTTATTATCTAAAAAGTAGCATCAAGATCAAAGCATTATGAGTAACAGC
CGCCTCTGCAATAACTAAGATGCATACAGCCAATCATCTAAAGTCCGATAAAAAGATAAAAAAGACGACAAATGGACAAC
CGTAGAGTCATATAGACCGACACTATGTCTATGTCGAAAGGGGCGGTGAACCGATCCAGAGATTATGCTGCCACCCTGTT
CCAATCGCGTACATACCGCCTTGAACAGCGGTTGGTACTCCACTCGTTATAGCGTAAACCATGTATGAAACGAGTGCGTA
CAACGAAAAATAACCTGCAAAGGAGAAGCATTTTTGTTATTGAAAACCAAATTGTTTCTATATAGCCAAAGCGACCATAG
TAAAACATACACTCCCATCCTTATTAGCATTTTCAGTCTATTTGAAATACCATCCAACCAATGACCAAAAATATTGGCGA
CACTTGTGAGCGGATACAAATTTGACGCTATTTGAATGACCGACCACGTAGAACGTGTAAACTTGCATTGGAAAAAGAGG
TGTTTAATTGTCTCTTCATGAGTGCAAAAATAGCACTTCTTAGAGCATCTTCAACAGCCGCCGAACGCGCCGCGCGCTAA
AAATTACTTTGTCGCGCGCCCATCGCCTGGTTTGGCACGGCATGCAGCGCCGGCTCCAGCAGCCGCGCTAAAATGTAGAG
CGCGCGCAGCTCCAGCAGCGCGCAAAAATGCAGCGCGCGCGACTCTCGCACAAGCAACATATGCATTCCAAAACAGAAGC
AAAAAGATCAAACACAAACAAAATAAATCAAAATAAATAGTTCAATTTCGTTATTACAACTCAAACAAACAGTTTAT
>chr5D_1
GGTGATGATGGCAAGTCCGTGGTGGCGCACGTTCGTGGGTGGCTTGTCTGGTGGTGCGCGTCGGACCGTTCGGGGTTGTG
GGTGTTTGGCGGATGGGAGAAATCCGGGCCGGCTTGCCGGCACCGACGCAGTGACGCCCGTGGGCGCCATCGTTCCTTCC
TGAAGGGCGTCGGGTCTTCCCCTTCCCCACGCCCCTCCGCGTACCGGGGGAAACCCTAGGACCTGTCCGGGCAGCAG---
CGTCGTCGTC---GTCGTGTTCCTTCCTGAAGGTGCTACTTGGTATGCGGAGGTTCGAGGTGCCTGGAGCGAGGTGGTAC
ATCTCCGGTGGGCGCAACGGTTTTGGGTTATCATCGTTTTCGTCGATCCGACGTTGTGGACATTATTTTCTCTCTTCTTT
CTCTTTTGTTTCTTTTGGGCATGCTTGTGCTGTTTGCCCCAGCATTGGACTCTTTGTTGTATCGGGCGGTTGCTATATCA
ATATAGCGGGGCGAAAGCCTTTTTCGTAA---------------------------------------------------
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>chr5B_1
GGTGATGATGGCAAGTCCGTGGTGGCGCACGTTCGTGGGTGGCTTGTCTGGTGGTGCGCGTCGGACCGTTCGGGGTTGTG
GGTGTTTGGCGGATGGGAGAAATCCGGGCCGGCTTGCCGGCCCCGACGCGGTGACGCCCGTGGGCGCCATCGTTCCTTCC
TGAAGGGCGTCGGGTCTTCCCCTTCCCCACGCCTCTCCGCGTACCGGGGGAAACCCTAGGACCTGTCCGGGCAGCAGCGT
CGTCGTCGTC---GTCGTGTTCCTTCCTGAAGGTGCTGCTTGGTATGCGGAGGTTCGAGGTGCCTGGAGCGAGGTGGTAC
ATCTCCGGTGGGCGCAACGGTTTTGGGTTATCATCGTTTTCGTCGATCCGACGCTGTGGACATTATTTTCTCTCTTCTTT
CTCTTTTGTTTCTTTTGGGCATGCTTGTGCTGTTTGCCCCAGCATTGGACTCTTTGTTGTATTGGGCGGTTGCTATATCA
ATATAGCGGGGCGAAAGCCTTTTTC-------------------------------------------------------
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>chr5B_1
GGTGATGATGGCAAGTCCGTGGTGGCGCACGTTCGTGGGTGGCTTGTCTGGTGGTGCGCGTCGGACCGTTCGGGGTTGTG
GGTGTTTGGCGGATGGGAGAAATTCGGGCCGGCTTGCCGGCACCGACGCGGTGACGCCCGTGGGCGCCATCGTTCCTTCC
TGAAGGGCGTCGGGTCTTCCCCTTCCCCACGCCCCTCCGCGTACCGGAGGAAACCCTAGGACCTGTCCGGGCAGCAG---
CGTCGTCGTCATCGTCGTGTTCCTTCCTGAAGGTGCTGCTTGGTATGCGGAGGTTCGAGGTGCCTGGAGCGAGGTGGTAC
ATCTCCGGTGGGCGCAACGGTTTTGGGTTATCATCGTTTTCGTCGATCCGACGTTGTGGACATTATTTTCTCTCTTCTTT
CTCTTTTGTTTCTTTTGGGCATGCTTGTGCTGTTTGCCCCAGCATTGGACTCTTTGTTGTATCGGGCGGTTGCTATATCA
ATATAGCGGGGCGAAAGCCTTTTTCGTTAGAAT-----------------------------------------------
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>chr6D_1
GGTGATGATGGCAAGTCCATGGTGGCGCACGTTCGTGGGTGTCTTGTCTGGTGGTGCGCGTCGGACCGTTCGGGGTTGTG
GGTGTTTGGCGGATGGGAGAAATCCGGGCCGGCTTGCCGGCACCGACGCGGTGACGCCCGTGGGCGCCATCGTTCCTTCC
TGAAGGGCGTCGGGTCTTCCCCTTCCCCACACCCCTCCGCATACCGGGGGAAACCCTAGGACCCGTCCGGGCAGCAG---
CGTCGTCGTC---GTCGTGTTCCTTCCTGAAGGTGCTGCTTGGTATGCGGAGGTTCGAGGTGCCTGGAGCGAGGTGGTAC
ATCTCCGGTGGGCGCAACAGTTTTGGGTTATCATCGTTTTCGTCGATCCGACGCTGTGGACATT-TTTTCTCTCTTCTTT
CTCTTTTGTTTCTTTTGGGCATGCTTGTGCTGTTTGCCCCAGCATTGGACTCTTTATTGTATCGGGCGGTTGCTATATCA
ATATAGCGGGGCGAAAGCCTTTTTCGTTAA--------------------------------------------------
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>chr2D_1
GGTGATGATGGCAAGTCCGTGGTGGCGCACATTCGTGGGTGGCTTGTCTGGTGGTGCGCGTCGGACCGTTCGGGGTTGTG
GGTGTTTGGCGGATGGGAGAAATCCGGGCCGGCTTGCCGGCACCGACGCGGTGACGCCCGTGGGCGCCATCGTTCCTTCC
TGAAGGGCGTCGGGTCTTCCCCTTCCCCACGCCCCTCCGCGTACCGGGGGAGACCCTAGGACCTGTCCGGGCAGCAG---
CGTCGTCGTC---GTCGTGTTCCTTCCTGAAGGTGCTTCTTGGTATGCGGAGGTTCGAGGTGCCTGGAGCGAGGTGGTAC
ATCTCCGGTGGGCGCAACGGTTTTGGGTTATCATCGTTTTCGTCGATCCGACGCTGTGGACATTATTTTCTCTCTTCTTT
CTCTTTTGTTTCTTTTGGGCATGCTTATGCTGTTTGCCCCAGCATTGGACTCTTTGTTGTATCGGGCGGTTGCTATATCA
ATATAGCGGGGCGAAAGCCTTTTTCGTAA---------------------------------------------------
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>chr7D_1
GGTGATGATGGCAAGACCGTGGTGGCGCATGCTCGTGGGTGGCTTGTCTGGTGGCGCGCGTCGGACCGCTCAGGGTTGTG
GGTGTTTGGCGGATGGGAGAAATCCGGGCCGGCTTGCCGGCACCGACGCGGTGACGCCCGTGTGCGCCATCGTTCCTTCC
TGAAGGGCGTCGGATCTTCCCCTTCCCCGCGCCCCTCCGCGTACCGGGGGAAACCCTAGGACCTGTCCGGGCAGCAG---
CGTCGTCGTC---GTCGTGTTCCTTCCTGAAGGTGCTGCTTGGTATGCGGAGGTTCGAGGTGCCTGGAGCGAGGTGGTAC
ATCTCCGGTGGGCGCAACGGTTTTGGATTATCATCGTTTTCGTCGATCCGACGCTGTTGACTTTATTTTCTCTCTTCTTT
CTCTTTTGTTTCTTTGGGT-ATGCTTGTGCTGTTTGCCCCAGCATTGGACTCTTTGTTGTATCGGGCGGTTGCTATATCA
ATATAGCGGGGCGAAAGCCTTTTTCTTAA---------------------------------------------------
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>chr4D_1
GGTGATGATGGCAAGTCCGTGGTGCCGCACGTTCGTGGGTGGCTTGTCTGGTGGTGCGCGTCAGACCGTTCGGGGTTGTG
GGTGTTTGGCGGATGGGAGAAATCCGGGCTGGCTTGCCGGCACCGACGCGGTGACGCCCGTGGGCGCCATCGTTCCTTCC
TGAAGGGCGTCGGGTCT-CCCCTTCCCCACGCCCCTCCGCGTACCGGGGGAAACCCTAGGACCTGTCCGGGCAGCAG---
CGTCGTCGTT---GTCGTGTTCCTTCCTGAAGGTGCTGCTTGGTATGCGGAGGTTCGAGGTGCCTGGAGCGAGGTGGTAC
ATCTCCGGTGGGCGCAACGGTTTTGGGTTATCATCGTTTT-GTCGATCCGATGCTGTGGACATTATTTTCTCTCTTCTTT
CTCTTTTGTTTCTTTTGGGCATGCTTGTGCTGTTTGCCCCAGCATTGGACTCTTTGTTGTATCGGGCGGTTGCTATATCA
ATATAGCGGGGCGAAAGCCTTTTTCGTTAA--------------------------------------------------
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>chr4A_1
GGTGATGATGGCAAGTCCGTGGTGGCGCACGTTCGTGGGTGGCTTGTCTGGTGGTGCGCGTTGGACCGTTTGGGGTTGTG
GGTGTTTGGCGGATGGGAGAAATCCGGGCCGGCTTGCCGGCACCGACGCGGTGACGCCCGTGGGCGCCATCGTTCCTTGC
TGAAGGGCGTCGGGTCTTCCCCTTCCCCACGCCCCTCCGCGTACCAGGGGAAACCCTAGGACCTGTCCGGGCAGCAG---
CGTCGTCGTC---GTCGTGTTCCTTCCTGAAGGTGCTGCTTGGTATGTGGAGGTTCGAGGTGCCTGGAGCGAGGTGGTAC
ATCTCCGGTGGGCGCAACGGTTTTGGGTTATCATCGTTTTCGTCGATCCGACGCTGTGGACATTATTTTCTCTCTTCTTT
CTCTTTTGTTTCTTTTGGGCATGCTTGTGCTGTTTGCCCCAGCATTGAACTCTTTGTTGTATCGGGCGGTTGCTATATCA
ATATAGCGGGGCGAAAGCCTTTTTCGTAATAA------------------------------------------------
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>chr5D_493
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-----------------------TCTCAAAAATCAACTGACCCCAATTTGAAATGCAGTCAACTGTCATTTAGCTAATGT
GACTAAATAGACTAACCTCGTGTTGAATTTCTTCAAAAGAAAAATGGATTGGACAGTTCTGTAGGAATTTAATAGGAATC
ATATCAACGTTTTCATTTGTTCCAAATGGTTTACACTTGTATGCCCAACTTTGTTGCTGAGAAGAAAAGACCCTCACAAT
ATGAACCATGACACACCTTTCATCTGCCCCGCAAAAAAAAAAGGCACACCTTTCATCTTATTTATCATGTAG-----TAT
A-------------------------------------------------------------------------------
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---------------------------------AAAAACGGGAGCGGCAGATTTATGACAAAATTTTAAGCCAACAGACG
CTATCGAAAACAGTCACGCAGTTTGTTTGGTTGCGTAGGGCGCAGTTGCAGGGACGTAACCTGAAACAGAATGGTTTGAT
CACAAGCTTGTCTTGTACCTTGCGACCCAAACCTCGGGGATGAATTCCAAGAGAATAATCACAATCTTCTCAGTTCCTCC
ACCGAGATGCGGACAAAGATGGCATTGCGCGTGCCGCAGATGCGTCCAGCCTTGGAGAGACCCGAGGTGCCACAAGAGAC
AAGCTCACCACATCGGAAGGTATGAACTCGAGGCCTCGCCATTTTTGTTGCTTCGAACAGGACAACGGGGTCGAACAATG
CCCATGGCTTTGACTCACCCGATAACCTTAATTACTCTCTGCAGGGAGTGGAACCGCGTTCTTGGGGTGGGATAGCATCC
ATCATGTTCCAGCAGCAGCAGCCGCCGCCGCAGCCGCAGCCGCAGCCGCAGCGCCAGCAGCAGCAGGAGGACGTGATGTC
GTCGGCGACGTCGTCGCCGGCGTCCACGCTGTACTCTCCCACGCCGTACGCTTTCGCGGGGACGTCGGTGCAGGAGCTGA
GCTCGGACCAGTGCAGCGTGCGCCTCATCAGCCTGCTGTACCAGTGCGCCTCCGAGGTGGCCGCCGGCGAGTTCGACCGC
GCTAACCTCTGCCTGGAGCACATCATGCAGCTCGCGTCGCTGGACGCGCCTCACACGCTTCAGCGCCTCGCCGCCGTCTT
CGCGGACGCGCTGGCCTGCAAGCTGCTCAAGCTCCTGCCGGGGCTCTCGCGGGCGCTCCTGTCGTCGTCGAGCTCCGACG
ACGCCCACCTCGTCCCGGCCGCGCGCCGCCACATGTTCGACATGCTCCCGTTCCTCAAGCTCGCGTACCTGACCACCAAC
CACGCCATCCTCGAGGCCATGGAGGGCGAGCGGTTCGTCCACGTCGTCGACCTCTCCGGCCCTGCCGCCAACCCCGCGCA
GTGGATCGCGCTGTTCCACGCGTTCCGCGGCCGGCGCGACGGCACGCCAAATCTCCGCATCACCGCCGTCCATGAGAGCA
AGGAGTTCCTGGCTGGCATGTCCGCCGTGCTCGTCAGGGAGGCCGAGGCGTTCGACATCCCGTTCCAGTTCAACGCCGTG
GAAGCGAGGCTCGAGGACATGGACTTCGACGCGCTCCGACACAACCTCCGCGTCAGGTCCGGCGAGGCGCTCGCGGTGAG
CGTGGCGCTGCAGCTGCACCGCCTCCTCGCGGCCGACGACACCGGAGGCAAGCGGCAGGGCGGCCTCACCCCGCTCCAGA
TCATCGCGCGGTCCAGCCCGAGCAGCTTCGGGGAGCTCCTGGAGCGGGAACTGAACACGCGGCTACAGCTGAGCCCCGAC
GCGTCCGCGTTCTCCTCCATGTCGCCGCAGTCCCCGATAGGCGGCCACTTCCCCGCGGGAGGGCAGCAGAGGCCCAAGAT
CGGGTCCTTCCTGTCGGCGGTGAAGGCGCTGTCTCCCAAGATCATGGTGGTGACGGAGCAGGAGGCGAACCACAACGGGG
CGGCGTTCCACGAGAGGTTCGACGAGGCGCTCAACTACTACGCGTCGCTGTTCGACTGCCTGGAGCGCGCGGCGGCGGCG
CAGCGGGGCAGCGCGGCGGCGGAGCGGGCGCGGGTGGAGCGGTCGGTGCTGGGGGAGGAGATCAGGAGCATCGTGGCGTG
CGAGGGCGGGGAGCGGAAGGAGCGGCACGAGCGGGCGCGGCAGTGGGCGGGGAGGATGGAGGCGGCGGGGATGGAGCGGG
TGGGGCTGAGCTACAGCGGCGCCATGGAGGCGAGGAAGCTGCTGCAGAGGAGCGGGTGGGGCGGGTACGAGGTGAGGCAC
GACGCCGAGGGGCACTGCTTCTTCCTCTGCTGGCACAAGAAGCCGCTGTACGCCGTCACCGCGTGGAGGCCGGCGGGGTA
CCACCACTCCGGCGGCGCCAGGTCCAGGTGATGGATGAGTGGAGCGTGTCTC---CTTCTCGTGTGCCGCATGTACCCTG
CTGTCTCTCTCTAATTCAGGCGTGTTAATTTGACTGTGGATTGGACTGGATGAACAGTTTTTCTTTTCTTTTTTTGAAAA
AA------------------------------------------------------------------------------
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>chr5B_493
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-----------------------TCTCAAAAATCAACTGACCCCAATTCAAAATTCAGTCGACTGTCATTTAGCTAATAT
GACTAAATAGACTAACCTCGTGTTGAATTTCTTCAAAAGAAAAATG-ATTGAACACTTCTGTAGGAATTTAATAGGAATC
ATATCAACGTTTTCATTTGTTCCAAAGGGTTTACACTT--ATGCCTAATTTTGTTGCTGAGAAGAAAAGACCCTCACAAT
ATGACCCATGACACACCTTTCATCTACCCCGG--AAAAAAAAGGCACACCTTTCATCTTATTTATCATGTACTCCCTCTG
TTCCTAAATAGTACTCCCTCCGTCCGGAAATACTTGTTCTCAAAATGGATAAAATGAATGTATCTATAACTAAAATAAGT
CTAGATATAATCATTTCTAGGACAAGTATTTCCGGACGGAGGAAGTATATGTCTTTCCAGAAATTTCAATTGGACTACAA
CATATAGATGCATGTAGACATATTTTAAACTGTAGATTCACTCATTTTGCTTCGTATGTAGTCTCTTGTTGAAATTTTTA
AAAAAAACTTATATTTGAGAACGAAGGGAGTATAAAAAAAGGAGCGGCAGATTTATGACAAAATTTTATGCCAACAGACG
CTATCGAAAACAGTCACGCACTTTGTTTGGTTGTGTAGGGCGCAGTTGCAGGGACGTAACCTGAAACAGAATGGTTTGAT
CGCAAGCTTGTCTTGTACCTTGCGACCCAAACCTCGGGGATGAATTCCAAGAGAATAATCTCAATCTTCTCAGTTACTCC
ACCGAGATGCGGACAAAGATGGCATTGCGCGTGCCGCAGATGCGTCCAGCCTTGGAGAGACCCGAGGTGACACATGAGAC
AAGCTCACCACATCGGAAGGTATGAACTCGAGGCCTCGCCATTGTTGTTGCTTCGAACCGGACAACGGGGTCGAACAATG
CCCATGGCTT-GACTCACTCGATAACCTTAATTACTCTCTGCAGGGAGTGGAACCGCGCACTTGGGGTGGGATAGCATCC
ATCATGTTCCAGCAGCAGCAGCC---------------------GCCGCAGCGCCAGCAGCAGCAGGAGGACGTGATGTC
GTCGGCGACGTCCTCGCCGGCGTCGACGCTGTACTCTCCCACGCCGTACGCTTTCGCGGGGACGTCGGTGCAGGAGCTGA
GCTCGGACCAGTGCAGCGTGCGCCTCATCAGCCTGCTGTACCAGTGCGCCTCCGAGGTGGCCGCCGGCGAGTTCGACCGC
GCTAACCTCTGCCTGGAGCATATCATGCAGCTCGCGTCGCTGGACGCGCCTCACACGCTGCAGCGCCTCGCCGCCGTCTT
TGCGGACGCGCTGGCCTGCAAGCTGCTGAAGCTCCTGCCGGGCCTCTCGCGGGCGCTCCTCTCGTCTTCGAGCTCCGACG
ACGCCCACCTCGTCCCGGCCGCGCGCCGCCACATGTTCGACATGCTCCCGTTCCTGAAGCTCGCGTACCTGACCACCAAC
CACGCCATCATCGAGGCCATGGAGGGCGAGCGGTTCGTCCACGTCGTCGACCTCTCCGGCCCTGCTGCCAACCCCGCGCA
GTGGATCGCGCTGTTCCACGCATTCCGTGGCCGGCGCGACGGCACGCCGAATCTCCGCATCACCGCCGTCCACGAGAGCA
AGGAGTTCCTCGCTGGCATGTCCGCGGTGCTCGTCAGGGAGGCCGAGGCGTTCGACATCCCGTTCCAGTTCAACGCCGTC
GAGGCGAGGCTCGAGGACATGGACTTGGACGCGCTCCGGCACAACCTCCGCGTCAGGTCCGGCGAGGCGCTCGCGGTGAG
CGTAGCGCTGCAGCTGCACCGCCTCCTCGCGGCCGACGACACCGGAGGCAGGCGGCAGGGCGGCCTCACCCCGCTCCAGA
TCGTCGCGCGGTCCAGCCCGAGCAGCTTCGGGGAGCTCCTGGAGCGGGAACTGAACACGCGGCTACAGCTGAGCCCCGAC
GCGTCCGCGTTCTCCTCCATGTCGCCGCAGTCCCCGATAGGCGGCCACTTCCCCGCCGGAGGGCAGCAGAGGCCCAAGAT
CGGGTCCTTCCTGTCGGCGGTGAAGGCGCTGTCTCCCAAGATCATGGTGGTGACGGAGCAGGAGGCGAACCACAACGGGG
CGGCGTTCCACGAGAGGTTCGACGAGGCGCTCAACTACTATGCGTCGCTGTTCGACTGCCTGGAGCGCGCGGCGGCGGCG
CAGCGGGGCAGCGCGGCGGCGGAGCGGGCGCGGGTGGAGCGGTCGGTGCTGGGGGAGGAGATCAGGAGCATCGTGGCGTG
CGAGGGCGGGGAGCGGAAGGAGCGGCACGAGCGGGCGCGGCAGTGGGCGGGGAGGATGGAGGCGGCGGGGATGGAGCGGG
TGGGGCTGAGCTACAGCGGCGCCATGGAGGCGAGGAAGCTGCTGCAGAGGAGCGGGTGGGGCGGGTACGAGGTGAGGCAC
GACGCCGAGGGGCACTGCTTCTTCCTCTGCTGGCACAAGAAGCCGCTGTACGCCGTCACCGCTTGGAGGCCGGCGGGGTA
CCACCACTCCGGCGGCGCCAGGTCCAGGTGATGGATGAGCGGAGCGTATCTCCTTCT---CGTGTGCCGCATGTACCCTG
CTGTCTCTCTCTAATTCAGGTGTGTTAATTTGACTGTGGATTGGACTGGATGAACAGCTTGTTCT---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
>SNPs
---------S------S-------------------------------------S-------------------------
------------------------S-------------------------------------------------------
---------------------------------------S------------------------------------S---
--------------------------S--------------------------------------------------S--
-----S---S---S----------------------------------S-------------------------------
-----------S-----------------S--------S---------------------------S-------------
------------------S---------------S-------S----------------------S--------------
-----------------------------------------------------SSS---S--------------------
S-------------------------------------------------------------------------------
-----------------------------S------S-----------------------------------SSSSS--S
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------S------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------S---------------------S--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------S----------------------S--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---S----------------------------------------------------------------------------
----------------------------------------------------------------------S---------
---------S----------------S-----------------------------------------------------
-------------------S------------------------------------------------------------
----------------------------------------------------------------------------S---
------S-------------------------------------------------------------------------
---S-----S----------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------S---------------------
--------------------------------------------------------------------------------
-------------------------------------------S------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----S---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------S-----------------------------------
--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_267
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------GTCGTCGTCGTGTTCCTTCT-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
>reverse_1420
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------AGACAACGGGGTCGAACAAT-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
>forward_334
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------TGGCAC
ATCTCTGGTAGGCA------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
>reverse_2247
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------CGGCTCGAGGACATGGACTT------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
>forward_1642
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------TCCACGCTGTACTCTCCCAT--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
>reverse_3462
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------TGAACAGCGGTTGGTACTCC---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
