>input_sequence_43797
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------------------ATGGCTCAAGCTTGCCTGCCACCTGGCTTTCGTTTCCATCCAACTGATGTTGAGCTTGTTTC
TTACTACTTGAAAAGGAAGATTATGGGGAAGAAACTTTTTGTTGAAGCTATTTCAGAGGTTGAGCTGTACAAATTTGCTC
CTTGGGACCTTCCTGGTAATTTTCCTCTATTGTTTTGATTTATCTTGATGTAAGAATTGCACCCGAATGAGTTGGAAACT
AATCTAGAATTTTTCAAATGCTTCCACTTTAGTTGAGTTTAGCTATTACTTTTGTTACAACCTTGTATGTTTCCGTGCAG
ATAAATCC-------TGTCTCCAGAGCAAAGATCTTGAGTGGTTCTTCTTTTGTCCCCGTGACAAAAAATATCCTAAAGG
GTCTAGGACGAACCGTGCCACACCAAATGGTTATTGGAAAACAAGTGGAAAAGACAGAACAATTGAGCTGAACTCTCGCA
TTGTTGGGTTGAAGAAAACATTGATTTTTCATGAAGGCAAGGCACCCAAAGGCAATAGGACTGATTGGGTGATGTATGAA
TACAAAATGGAAGATGAAACTTTGGTGTCTGCTGGTTTCTCCAAGGTACTTCTAACTCTTATCTAATGTTTTTGTTTGTT
TCACTTTATGTTGAATATGTTCAGTACAGTATATGAAAGATTCTACCATACTGGAATATGTTTTGAGGCATGCTCTTTTG
CTTGTGCCTGAAATTGTGCGTGATAAGTT-GCCTTTATATTTAGTTAGAAAGTTGTGATCCTAGTATTTCTTTCAAATTC
TCTGCAAGTTTATTTAAATATATTTGTTGTTTGTTTGTTTCAGGATGCTTATGTACTCTGCAAGATATTTAAAAAGAGTG
GGCTTGGCCCAAGGATCGGCGAGCAATATGGGGCTCCTTTTGATGAAAATGAATGGGAGAATTTAGATGTTGGATCTTCT
ATCTTCTCTTTTGCACCGTCCTCAGGTGTAGATGATCCACAGGTTGAAAGTTCTGCTTTGGCTACTGCCATAGTTATGCA
GGAACCATCCGCTCCTCAGCAGTCTGTTCAATTTTCTGAACATGTTAATATCTGTTCTGATGAGGTCAATGACGTGCCTC
CTGAAATTGATGGAATATTGTTGGACGAACTGACAAAGTTTTTGGATGATTCTCCGAACCACGACGTAGTTTTTCCAGAG
GTATTGGCTTGCTGACTTCTTGCTTAACATGGTCTGTTTGCTTGTACCCAAGGAATTACAAATTATTTACTAACCTTTAT
ACATCTTAC-----AGAATTCTGGTCTCCCTCCAATGTCTGAGCTTGAGGCTCAAGCTTTTGAGATAAATAGTGCTGAGC
TCTATGACCAATTGGCAGGACTTACCCAGTCAGGAGATATGTCTGCTGTAAATTTCCCTGCTAGCAATGGCGATGTTATT
GAAAACAATTTGCAGCAAACAAACTCTGCACTTGCTATGGATGATGATTATATAGGGCTGGATGATCTGCTTGCTCCTGG
GGAAACCTTCTCCTATGATTTTTCTGGTGAAACCTTTTCCTATGATCTGCCTGGTGGAAGCTTCTCCTATGATTTGTCTG
TGCCAAACAATCAGTTTTTGCAGTACCCACTTGATCAATCAACTAATGGCAGTCACTACGGTGTTGGTGCTACTCAATCA
ACTTTCGAAGCAAGTGGATCTCTTCCACCAATGCAGCCAATGCCAAGCACTTTTGATGACATGCCTTCTGTTTCCAGACT
GCTGAATGATG-----------------------------------------------------------------CTGT
TATCTTTGTGGTCATTGGTGCTGAATGA----------------------------------------------------
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>chr1B_1_TraesCS1B01G277300
GTCATGTATGATCCTTTTTGCAGTTTTCCTTTTGTTGAAAGATCCTGTAGTTTTTTCTTGAGTTACATCAGAGCTTATGA
AATATA--CTAAAATTCTCTCTATTTCCTCCTCAAAGCCACGTTGTAGGTTAGATTCATTCACCTTGTTAATGTG---GT
ATTTCACTGTGAGCTGTGAACAACGTAAAATTCACTTCCTA--TATATGCAATCTTTTCTTTGCTTCCTAGGACTTTAGT
TATTTGGATGGGAAGATTCACCTTGTTTATCTGGATAAAACATAGAACAATACGTATTCTGTATATTCTTCTGCTGTT--
TAAGTTTTTCCCTTCTGATGATGATTACTAATGTCTTGCAGGTTTTTGATCTTAGTCACTCATGTCTTTTGAAGTCAGCG
AGGG---ATCCCCTTATTTCCTCTCGTGCTACTTCTGGTTCATATATTGCATAAAATTCCGGGACTTCACTTGATACAAG
TGGATCATCTGGAG-------------------------------TTTTGTGTGAATACTTCCTATCATGTGAATCAGTG
GTAGTTGGTTTAATTGGCAAGACTCAAACT--TCTCATCTGAGTTCAGAAACATTTGTTGCTTGAGTCTTTGGTGGACTG
CTTTCCTTGAGTCTTGCCAAGCCTGGTTTCCCATCAGTTGTTTCTCCTCCAGCTTTCGGTTGGACCATTCTCTCTTCTGG
TCTAATCTCATCAATCTTTTGATCCTCCCTTCAGAATAGTTGTT-TAACGTGAGCTTGTCCTACTCTGCTCACACTGCAA
TCTTCTGAAGCTCTCTTCTCTGGTTCTTGTCTGTTCTCCAAGCATTTGAGAGCTCCTCTCTCCTTAAGTTTGGTTGATCT
GTGGCCCTGAATTCTGTCCTTTGAGGGCTAAAGCATATCCCTTTCT------GGCCAAACTTGATATTTCCCTGATT-AC
TGGTATTGTTAGTTGCATAATCTGCTGAAGCATTTCTTGTTGTGT-----CTCTTGTGTTCTTCTCTTGATACTGAGCAC
AAGAGACCCACTGCAGTGATGGCTCAAGCTTGCCTGCCACCTGGCTTTCGTTTCCATCCAACTGATGTTGAGCTTGTTTC
TTACTACTTGAAAAGGAAGATTATGGGGAAGAAACTTTTTGTTGAAGCTATTTCAGAGGTTGAGCTGTACAAATTTGCTC
CTTGGGACCTTCCTGGTAATTTTCCTCTATTGTTTTGATTTATCTTGATGTAAGAATTGCACCCGAATGAGTTGGAAACT
AATCTAGAATTTTTCAAATGCTTCCACTTTAGTTGAGTTTAGCTATTACTTTTGTTACAACCTTGTATGTTTCCGTGCAG
ATAAATCC-------TGTCTCCAGAGCAAAGATCTTGAGTGGTTCTTCTTTTGTCCCCGTGACAAAAAATATCCTAAAGG
GTCTAGGACGAACCGTGCCACACCAAATGGTTATTGGAAAACAAGTGGAAAAGACAGAACAATTGAGCTGAACTCTCGCA
TTGTTGGGTTGAAGAAAACATTGATTTTTCATGAAGGCAAGGCACCCAAAGGCAATAGGACTGATTGGGTGATGTATGAA
TACAAAATGGAAGATGAAACTTTGGTGTCTGCTGGTTTCTCCAAGGTACTTCTAACTCTTATCTAATGTTTTTGTTTGTT
TCACTTTATGTTGAATATGTTCAGTACAGTATATGAAAGATTCTACCATACTGGAATATGTTTTGAGGCATGCTCTTTTG
CTTGTGCCTGAAATTGTGCGTGATAAGTT-GCCTTTATATTTAGTTAGAAAGTTGTGATCCTAGTATTTCTTTCAAATTC
TCTGCAAGTTTATTTAAATATATTTGTTGTTTGTTTGTTTCAGGATGCTTATGTACTCTGCAAGATATTTAAAAAGAGTG
GGCTTGGCCCAAGGATCGGCGAGCAATATGGGGCTCCTTTTGATGAAAATGAATGGGAGAATTTAGATGTTGGATCTTCT
ATCTTCTCTTTTGCACCGTCCTCAGGTGTAGATGATCCACAGGTTGAAAGTTCTGCTTTGGCTACTGCCATAGTTATGCA
GGAACCATCCGCTCCTCAGCAGTCTGTTCAATTTTCTGAACATGTTAATATCTGTTCTGATGAGGTCAATGACGTGCCTC
CTGAAATTGATGGAATATTGTTGGACGAACTGACAAAGTTTTTGGATGATTCTCCGAACCACGACGTAGTTTTTCCAGAG
GTATTGGCTTGCTGACTTCTTGCTTAACATGGTCTGTTTGCTTGTACCCAAGGAATTACAAATTATTTACTAACCTTTAT
ACATCTTAC-----AGAATTCTGGTCTCCCTCCAATGTCTGAGCTTGAGGCTCAAGCTTTTGAGATAAATAGTGCTGAGC
TCTATGACCAATTGGCAGGACTTACCCAGTCAGGAGATATGTCTGCTGTAAATTTCCCTGCTAGCAATGGCGATGTTATT
GAAAACAATTTGCAGCAAACAAACTCTGCACTTGCTATGGATGATGATTATATAGGGCTGGATGATCTGCTTGCTCCTGG
GGAAACCTTCTCCTATGATTTTTCTGGTGAAACCTTTTCCTATGATCTGCCTGGTGGAAGCTTCTCCTATGATTTGTCTG
TGCCAAACAATCAGTTTTTGCAGTACCCACTTGATCAATCAACTAATGGCAGTCACTACGGTGTTGGTGCTACTCAATCA
ACTTTCGAAGCAAGTGGATCTCTTCCACCAATGCAGCCAATGCCAAGCACTTTTGATGACATGCCTTCTGTTTCCAGACT
GCTGAATGATG-----------------------------------------------------------------CTGT
TATCTTTGTGGTCATTGGTGCTGAATGATGCTGCCGTTTCTGG-TTTGGTTGCCCATCATTGTCTGATGCGGCTCTTGAT
GGATCTTGGGTGTTGGTCCCTGCTGTAGATGGTCCAACGATGGTGTTTGTATCATGGCATGGCTGCTGCTCAATTGAAGA
AGCCGGAACTT-GTTGTGTCTCTGATCACGAGCACAATACTGGACAAGTGACCGAGCTTAGCTTACTGCTTTATCGCAGA
GAAACTGTTT-TCTGCTGGTTTGGAAGATGTCTTATCTGGGTGGAGATGCTGCAGTCCACCGTAGTTCAT--TGTAATAG
CTACCATGTTAGATGCCGAGTTGTCTATAAACCTAATGACAACC---TAGCTTAAGTCGCATCTTCTATCTATTTTCTGT
TAAAAA--TAGTAATGTATTTGAACCATCGTCATTATTATAATTATTGTAATCGTG-CCAATACCGTTTATGTTTTTTTT
TTGATGCAATGTTTCCCCAATTTAGTTC--TATATATGCCTTTTTTTTTGTTCTTGGGTGCCTTAAGGCCTTGTTTGGTA
GGAGTGGATTTGAGAGGTTTGGTGAGGAGGGGATTTCA-----------------------------------------A
ACCTCAAATCCTCCTCAAACCACACATCCCCTTCGTACAAAACAC--TTTGACAGGGATGGATTTCCATACTGAATTAAA
ATGGTGTAAAACAGTTAAAAATCTAATCTTGCAACAATTCTTCGTA----------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------ACAAACCACA-------
-----------CTCTAATTATTTACTGTCATCCGGGGACCTTGCTTCTA-------------------------------
-GACAGACAAAACTGAACATTGTTCATGTGCAATCTAGGTG-------CCTTGATTTACTGTCAATGTAAAAGCTCATCC
AGAAACACTTTAATTTCTGTCAGCATGAAAACCCACACTTCTATCAAAATTCAAATCAAGGTACTGGTTCTCACAAGAGC
CGGGTTCCAATGATTTTCAGGAGAGGAAAGGGATGGCCATGGAGGCAGGCAGTCTCATCGATGGATGCAACGAACTATTC
AAATCG--AGCCATGGCCGCTGGGTGTCGGACGAGGAGCA
>chr1D_1
GTCCTGTATGATCCTTTTTGCAGTTTTCTTTTTGTTGAAAGATCCTGTAGTTTTTTCTT-----ACATCAGAGCCTATGA
AATATATACTAAAATTCTCTCTGTTTCCAACCCAAAGCCACGTTGTAGGTTAGATTCAC----CTTGTTAATGTGC---T
ATTTCACTGTGAGATGTGTACAATGTAAAATTCACTT--TA--TATATGCAATCTTTTCTTTGCTTCCTAGTACTTCTGT
TATTTGGATGGGAAGATTCACCTTGTTGATCTGGATAAAACATAGAACAATATGTATTCTGTATATTCTTCTACTGTT--
TATGTTTTTCCCTGCTGATGATGATTTCTAATCTCATGCAGGTTTTTGATCTCAGTCACTCATGTCTTTTGAAGTCAGCG
AGGG---ATCCCCTTATTTCCTCTCGTGCTACTTCTGGTTCATATATTGCATAAAATTCCGGGACTTCACTTGATACAAG
TGGATCATCTGGAG-------------------------------TTTTGTGCGAATACTTCCTATCATGTGAATCAGTG
GTAGTTGGTTTAATTGGCAAGACTCAAACTTCTCTCATCTGAGTTCAGAAACATTTGTTGCTTGAGTCTTTGGTGTACTG
CTTTCCTTGAGTCTTGCCAAGCCTGGTTTCCCATCAGTTGTTTCTCCTCCAGCTTTCGGTTGGACCATTCTCTCTTCTGG
TCTAATCTCATCAATCTTTTGATCCTCCCTTCAGAATAGTTGTT-TAACGTGAGC-TGTCCTACTCTGCTCACACTGCAA
TCTTCTGAAGCTCTCTTCTCTGGTTCTTGTCTGTTCTCCAAGCATTTGAGAGCTCCTCTCTCCTTAAGTTTGGTTGATCT
GTGGCCCTGAATTCTGTCCTTTCAGGGCTAAAGCATATCCCTTTCT------GGCCAGACTTGATATTTCCCTGATT-AC
TGGTATTGTTAATTGCCTAATCTGGTGAACCATTTCTGGTTGTGTTTCACCTCTTGTGTTCTTCTCTTGATACTGAGCAC
AAGAGACCCACTGCAGTGATGGCTCAAGCTTGCCTGCCACCTGGCTTTCGTTTCCATCCAACTGATGTTGAGCTTGTTTC
TTACTACTTGAAAAGGAAGATTATGGGGAAGAAACTTTTTGTTGAAGCTATTTCAGAGGTTGAGCTGTACAAATTTGCTC
CTTGGGACCTTCCTGGTAATTTTCCTCTATTGTTTTGATTTTTCTTGATGTAAGAATTGCACGCAAACGAGTTGGAAACT
AATCTAGAATTTTTCAAATGCTTCCACTTTAGTTGAGTTTAGCTCTTACTTTTGTTGCAACCTTGTATATTTCCGTGCAG
ATAAATCC-------TGTCTCCAGAGCAAAGATCTTGAGTGGTTCTTCTTTTGTCCCCGTGACAAAAAATATCCTAAAGG
GTCTAGGACGAACCGTGCCACACCAAATGGTTATTGGAAAACAAGTGGAAAAGACAGAACAATTGAGCTGAACTCTCGCA
TTGTTGGGTTGAAGAAAACATTGATTTTTCATGAAGGCAAGGCACCCAAAGGCAATAGGACTGACTGGGTGATGTATGAA
TACAAAATGGAAGATGAAACTTTGGTGTCTGCTGGTTTCTCTAAGGTACCAATAACTCTTATCTAATGTTTTTGTTTGTT
TCACTTTATGTTAAATATGTTCAGTACAGTATATGAAAGATTCTACCATACTGGAATATGTTTTGAGGCATGCTCTTTTG
CTTGTGCCTGAAATTGTGCGTGGTAAGTTAGCCTTTATATTTAGTTAGAAAGTTGTGATCCTAGTATTTCTTTTAAATTC
TCTGCAAGTTTATTTAAATGTATTTGTTGTTTGTTTGTTTCAGGATGCTTATGTACTCTGCAAGATATTTAAAAAGAGTG
GGCTTGGCCCAAGGATCGGCGAGCAATATGGGGCTCCTTTTGATGAAAATGAATGGGAGAATTTAGATGTTGGATCTTCT
ATCTTCTCTTTTGCACCGTCGTCAGGTGTAGAGGATCCACAGGTTGAAAGTTCTGCCTTGGCTACTGCCATAGTTATGCA
GGAACCATCCGCTCCTCAGCAGTCTGTTCAATTTTCTGAACATGTTAATATCTGTTCTGATGAGGTCAATGACGCGCCTC
CTGAAATTGATGGAATATTGTTGGACGAACTGGCAAAGTTTTTGGATGATTCTCCGAACGATGATGTAGTTTTGCCAGAG
GTATTGGCTTGCTGACTTCTTGCTTAACATGGTCTGTTTGCTTGTACCCAAGGAATTACAAATTATATACTAACCTTTAT
ACATCTTAC-----AGAATTCTGGTCTCCCTCCAATGTCTGAGCTTGAGGCTCAAGCTTTTGAGATAAATACTGCTGAGC
TCTATGACCAATTGGCAGGACTTTCCCAGTCAGGAGATATGTCTACTGTAAATTTCCCTGCTAGCAACGGGGATGTTATT
GAAAACAATTTGCAGCAAGCAAACTCTGGACTTGCTATGGATGATGATTATATAGGGCTGGATGATCTGCTTGCTCCTGG
GGAAACCTTCTCCTATGATTTTTCTGGTGAAACCTTTTCCTATGATCTGCCTGGTGGAAGCTTCTCCTATGATTTGTCTG
TGCCAAACAATCAGTTTTTGCTGTACCCACTTGATCAATCAACTAGTGGCAGTCACTACGGTGTTGGTGCTACTCAATCA
ACTTTCGAAGCAAGTGGAACTCTTCCACCAATGCAACCAATGCCAAGCACTTTTAATGACATGCCTTCTGTTTCCAAT--
----------------TGCTTGAACCCAGCCATGAAAGACCCATTCTCTTAGACAGCAACTTTTGAGGTAT-AAGTCTGT
TATCTTTGTGGTCATTGGTGCTGGAAGATGCTGCCGTTTCTGG-TTTGGTTGCCCATCATTGTCTGATGAGGCTCTTGGT
GGATCTTGGATGTTGGTCCCTGCTGTAGATGGTCCAACAATGGTGTTTGTATCATGGCATGGCTGCTGCTCAATTGAAGA
AGCCGGAACTTGGTTGTGTCTTTGATCACGAGCACAATACTGGACAAGTGACCGAGCTTAGCTTACTGCTTTACCGCGGA
GGAACTG-TT-TCTGCTGGTTTGGAAGATGTCTTATCTGGGTGGGGATGCTGCAGTCCACCGTAGTTCTTTCTGTAATAA
CTGCCATGTTAGATGCCGAGTTGTCCATAAACCTAATGACAACTTCGTAGCTTAAGTCGCATCTTCTATCTATTTTCTGC
CAATT------TACTGTATTTGAACCATCGTCATTATTATTATTATTGTAATCGTGCCCAATACCGTGTTTATGTTCTTG
TCGACGCAATGTTTCTTCCTTTTTTTTCGATATATATGCCTTTTTTTGTTCTTG--------------------------
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>chr5A_98
TCTAT---------------------------------------------------------------------------
-------------------------TCCTCCTCAAAGCCATGGTGTAGGTTAGATACAC----CTTGTTAATGTGCTAGT
ATTTCATTGCGAGTTGTGTACACTGTAAAATCCACTT--TCTTTATAGGCAATCTTTTCTTTGCTTCCTGG-ACTTTAGT
TAGTTGGATGGGAAGAT--ACCTCATTGATCTGGATAAAACATGGAACA-TATGTATTCTG--TATTTTCATTTCTTGCA
TATGTTTTTCCTTTCTGTC-ATGATTTCTAATCTCATGCAGGTTTTTGATCTGAATAACTCATGTCTTTTGAAGTCAGCG
AGGCATCATCCCCTTATTTCCTCTCATGCTACTTCTGGTTCATATATTGCATAAAATTCCG-------------------
------------AG-------------------------------TTTTGTGTGAATACTTCCTATCATGTGGATCAGTG
GTAGTTGGTTTAATTGGCAAGACTC-------TCTCATTTGAGTTCAGAAATATTTGTCGCTCGAGTCCTTGGTGTACTG
CTTTCCTTGAGTCTTGCCAAGCTTGGTTTCCCATCAGTTGTGTCTCCTCCAGCTTTCGGTTGG-----------------
---------ATCAATTTTTCGATCCTCCCTTCAGAACAGTTGTTATAACATGAGC-TGTCCTACTCTGCTCACACTGCAA
TCTTCTGATGCTCTCTTCTCTGGTTCTTGCTTGTTCTC-------TTTTGAGCTCCTCTCTCCTTAAGTTTGGTTGATCT
GTAGCCTTGA-TTCTGTCTTTTGAGGACAGAAG-------CATTCAACTTTCTGGCAAACTTAATATTTCCCTGATTTAC
TGGTATTGTTAGTTGCATTATCTGGTGAAGCAATTCTGGTTGTGTTTCACCTCTTGTGTTCTTCTGTTGATACTGAGCAA
AAGAAACCCACTCCGGTGATGTCTCAAACCTGCCTGCCGCCTGGCTTTCGTTTCCATCCAACTGATGTTGAGTTTGTTTC
TTACTACTTGAAAAGGAAGATTATGGGGAAGAAACTTTTTGTCGAAGCTATCTCAGAGGTTGAGCTGTACAAATTTGCTC
CTTGGGACCTCCTGGT--AATTTCATCTATTGTTTTATTTTTTTT--ATTTAATGATTGCACCCAAATGAGTTGCAAATT
AATCTAGAATTCTTGTAATGCTCTCTCTTTGGTTGAATTTGGTTCCTGCCTTTGTCGCGACCTTCTATGTTTCTGTGCAG
ATAAATCATAAATCATGTCTCCAGAGCAAAGATCTTGAGTGGTTCTTCTTTTGCCCCCATGACAAAAAAAATCCTAAAGG
GTCTTGGACGAACCGTACCACACCGAATGGTTATTGGAAAACAAGTGGAAAAGACGGAACTATTGACCTGAACTCTCGCA
TTGTTGGGTTGAAGAAAACATTGATTTTTCATGAAGGCAAGGCACCCAAAGGCAATAGGACTGATTGGGTAATGTATGAA
TACAAAATGGAAGATGAAACCTTGGTGTCTACTGGTTTCTCAAAGGTACTGCTAACTCTTATCTGATGTTTTTGTTTGCT
TCACTTTTTTGAAGTT-TGTTCACTACAGTATATGAAAGATTCTACCATACTGGAATCTGTTTTGAGGCATGCTCTTTTG
CTTGTGGCTGAAATTGTATGTGATAAGTT-GCCTTTATATTTAGTTAGAAAGTTGTGATCCTAGTATTTCTTTCAAATTC
TCTGCCAGTTTATTCAAATATATTTGTCGTTTGTTTGTTTCAGGATGCTTATGTACTC------------------AGTG
GGCTTGGCCCAAGGATTGGTGAGCAATATAGGGCTCCTTTTGATGGAAATGAATGGGAGAATTTAGATGTTGGAACTTAT
ATCTTGTCTTTTGCACCATCGTCAGGTGTAGAGGATTCACAGGTCGAAAGTTCTGCCTGGGTTACTGCCATAGTTATTCG
GGAACCATCCGCTCCTCAGCAGTCTGTTCAATTTTCTGAACATGTTAATATCTGTTCTGATGAGGT--------------
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>chr1A_122
--------------------------------------------------------------------------------
-------------------------------------------TGTAGGTTAGATTCAT----GTTGTTAATGCGCTA--
-TTTCACTTTGAATTGCGTACAATGTAAAATTCACTT--GC--TATATGCAGTCTTTTCTTTGCTTCCTGGGACTTTAGT
TATTTGGATCGAA-------------------GGATAAAACATAGAACA-CATGTATTCTG--TATTTTTCTGCTGTT--
TATGTTTTTCCTTTCTGACGATGTTTTCTAATCTCATGCAGGTTTTTGATCTCAGTCACTCATGTCTTTTGAAGTCAGCG
AGGG---ATCCCCTTATTTCCACTCGTGCTACTTCTGGTTCATATATTGCATAAAATTCCG-------------------
------------AGAATTCACTTGATACAAGTGGATCATCTGGAGTTTTGTGCGAGTACTTCCTATCATGTGAATCAGTG
GTAGTTGGTTTAATTGGCAAGACTCAAACTTCTCTCATCTGAGTTCAGAAACATTTGTCGCTTGAGTCCTTGGTGTACTG
CTTTCCTTGAGTCTTGCCAAGCCTGGTTTTCCATAAGTTGTTTCTCCTCCAGCTTTTGGTTGGACCATTCTCTCCTCTGG
TCTAATCTCATCCATCCTTTGATCCTCCCTTCAGAATAGTTGTCATAACGTGAGC-TGTC---CTCTGCTCACACGGCAA
TCTTCTGAAGCTCTCTTCTCTGGTTCTTGTTTGTTCTC-------TTGAGAGCTC--CTCTCCTTAAGTTTGGTTGATCT
GCGGCCTTGAATTCTGTCTTTCGAGGACTGAAG-------CTTTCT------TGCCAAACTTGATATTTCCCTGATTTAC
TGGTATTGTTAATTGCATAATCTGGTGAAGCAATTCTGGTTGTGTTTCACCTCTTGTGTTCTTCTGCTGATACTGAGCGC
AAGACACCCACTGCAGTGATGGCTCAAACTTGCCTGCCACCTGGCTTTCGTTTCCATCCAACTGATGTTGAGCTTGTTTC
TTACTACTTGAAAAGGAAGATTATGGGGAAGAAACTTTTTGTTGAAGCTATCTCAGAGGTTGAGCTGTACAAATTTGCTC
CTTGGGACCTTCCTGGTAATTTTCATCTATTGTTTTATTTTTTAT--ATGTAATAATTTCACCCAAATTGGTTGGAAATT
AATCTATATTTCTCATAATGCTCTCACTTTGGTTGAATTTAGTTCTCAACTTTGTTGTGACCTTCTGTTTTTCTGTGCAG
ATAAATCATGTCTT-------CAGAGCAAAGATCTTGAGTGGTTCTTCTTTTGCCCCCGTGACAAGAAGTATCCTAAAGG
GTCTAGGACGAACCGTGCCACACCAAATGGTTATTGGAAAACAAGTGGAAAAGACAGAACAATTGAGCTGAACTCTCGCA
TTGTTGGGTTGAAGAAAACATTGATTTTTCATGAAGGCAAGGCACCGAAAGGCAACAGGACTGATTGGGTGATGTATGAA
TACAAAATGGAAGATGAAACTTTGGTGTCTGCTGGTTTCTCGAAGGTACTTTAAACTCTTATCTAATGTTTTTGTTTGTT
TCACTTTTTTGAAGTA-TGTTCACT---GTATATGAAAGATTCTACCATGCTGGAATATGTTTTGAGGCATGCTCTTTTG
CTTATGGCTGAAACTGAGCGTGATTAGTT-GCCTTTATATTTAGTTAGAAAGCTGTGATCCTAGTATTTCTTTCAAATTC
TCTGCAAGCTTAATTAAATATATTTGCTGTCTGTTTGTTTCAGGATGCTTATGTACTCTGCAAGATATTTAAAAAGAGTG
GGCTTGGCCCAAGGATTGGTGAGCAATATGGGGCTCCTTTTGATGAAAACGAATGGGAGAATTTAGATGTTGGATCTTCT
ATCTTCTCTTTTGCACCGTCCTCAGGTGTAGAGGATCCACAGGTCGAAAGTTCTGCCTTGGCTACTGCAATAGTTATTCA
CGAACCATCCGCTCCTCAGCAATCTGTTCAATTTTCCGAACATGTTAATATCTGTTCTGATCAGGTCAATGATGCGCCTC
CTGAAATTGATGGGATATTGTTGGACGAACTGACAAAGTTTTTGAATGATTCTCCCAACCATGACGTACGTTCGCCGGAG
GTATTAGCTTGCTGACTTCTTGCTTATCATATTCTGTATGTTTGTACCGAAGGAATTATAT-TTTTTTAATAACCTTTTT
ACATCTTTTGTTGTAGAATTCTGGTCTGCCTCCAATGTCTGAGCGTGAGGCTCAAGCTTTTGAGATAAATACTGCTGAGC
TCTATGACCAATTGGCAGTACTTGCCCAGTCAGGAGATATGCCTGCTGCAAATTTCCCTGCTAGCAACGGGGATGTTATT
GAAAACAATTTGCAGCAAACAAACTCTGGGCTTGCTATGGATGATGATTATATAGGGTTGGATGATCTGTTTGCTCCTGG
GGAAACTTTCTCCTATGATTTTTCTGGTGAAACATTCTCCTATGATTTGCCTGGTGGAACCTTCTCCT---ATTTGTCTG
TGCCAAACAATCAGTTTTCGCAGTACCCACTGGATCAATCATCTAATGGCCTTCACTACGGTGATGGTGCCACTCAATCA
ACTTTCTTAGCAAGTGGACCGCTTCCACCATTGGAACCAATGCCTAGCACTTTTGATGACATGCCTTCTGTTTCCAATAA
GCCTGCAAGCTCCTACTGCTTGAACCCAGCCATGAAAGACCCATTCTCATAGATAGCAACTTTTGAGGTACCAAGTCTGT
TACCTTTGTGGTCATTGATGTTGGAAGTTGCTGCTGATTCTGGTTTTGGTTGTCCATCATTGTCTGATGTGACTCTTGAT
GGATCTTGGATGTTGGTCCCTGCTCGAGATGACCCAACAATGGTGTTTGTATCATGGCATGGCTGCTGCTCTATTGAAGA
AGCCGGAACTTGGTTGTGTCTCA-ATCACGAGCACA-------------GACCGAGCTTAGCTTACTGCTATACCGCGGA
GAAACTG-TTTTCTGCTGGTTTGGAAGATGTCTTGTCTGGGTGGAGATGCTGCAGTCCATCTT-GTTCTTTCTGTAATAA
CTGCCATGTTTGATGC---GTTGTCCATAAACCTAGTGACAACTTAATAGCTTAAGTCGCATCTTCTATCTATTTTCTGT
CAAAGTAGTACTACTGTATTTGAACCATCGTCATTAATATTATTATT---------------------------------
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>chr6B_3275
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---------------------------------------------------------------TAAGGCCTTATTTGGTA
GGAGTGAATTTGAGAGGTTTGGTGAGGAGGGGATTTCAGGGGATTTGGTGAATCCCCCTCTTCCACCCAATCCCCTTGAA
ACCTCAAATCCCCCTCCAGCCACACATCCACCTCGTACAAAACATTGTTTGACAGGGATGGATTTTCATATTGAATTAAA
ATGGTGTAAAACAGTTAAAAATCTAATCTTGCAACAATTCCTCATATCTACAACATAATTTGCTTGACTTAGACTCAATT
TATGGATGG-GACCAAA-ACAAAGCATACTAA-GAAGGAACCAACAATATCAGTATCCATTGAAACAAAGGGACACGACC
AACAATATTAGTGTCCATTGAACCAACAATATCAGTATCCATTGACCTACTA-TGCAGGCTGGACAAACCACACTCTAAT
TATTTAAATCCCTCTAATTATTTACTATCATCCGGGGACCTTGCTTCTAGTCCAGAATTTTGGGTTTTTTTTATTTATGT
TGACAGACAAAACTGAACATTGTTCATGTGCAAAAGTTTATCCAGGGACCTTGATTTACTGTCAATGTAAAAGCTCATCC
AGAAACACCTTAATTTCTGTCAACATGAAAACCCACACTTCTATCAAAATTCAAATCAAGGTACTGGTTCTCACAAGAGC
CGGGTTCCAATGATTTTCAGGAGAGGAGAGGGATGGCCAAGGAGGCAGGCAGTCTCATCGATGGACGCAATGAAC-ATTC
AGATCG--AGCCATGGCCGCTGGGTGTCGGACGAGGAGCA
>chr2B_3330
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-------------------------------------------------------------------------------A
ACCTCAAATCCCCCTCCAGCCACACATCCCCTTCGTACAAAACACTGTTTGACAGGGATGGATTTTCATATTGAACTAAA
ATGTTGTAAAACAGTTAAAAATCTAATCTTGCAACAATTCTTCGTATCCACAACATAATTTGCTTGACTTGGACTTAATT
TATGGATGGGGACCAAACACAAAGCATACTAGA-AAGGAACCAACAATATCAATATCCATTGAAACAAAGGGACAGG---
---------------------ACCAACAATATCAGTATCCATTGACCTACTAGCGCAGGCTGGACAAACCACACTCTAAT
TATTTAAATCCCTCTAATTATTTACTGTCATCCCGGGACCTTGCTTCTAGTCCAGAATTTTGGGTTTTTTTTATTTATGT
TGACAGACAAAACTGAACATTGTTCATGTGCAGAAGTTCATCCAGGGACCTTGATTTACTGTCAATGTAAAAGCTCATCC
AGAAACACCTTAATTTCTGTCAGCATGAAAACCCACACTTCTATAAAAATTCAAATCAAGGTACTGGTTCTCACAAGAGC
CGGGTTCCAATGATTTTCAGGAGAGGAGAGGGATGGCCATCGAGGCAAGCAGTCTCATCGATGGACGCAAAGAACTATTC
AGATCG--AGCCATGGCCGCTGGGTGTCGGACGAGGAGCA
>chr6A_3337
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------AATCCCTCTCCAGCCACACATCCCCTCCATGCAGAACATTGTTTGACAGGGATGAATTTCCATATTGAATTAAA
ATGGTGTAAAACAGTTAAAAATCTAATCTTGCAACAATTCTTCACATTAACAACATAATTTGCTTGACTTGAAATCAATT
TATGGATGGGGACCAAA-ATGAAGCATACTAAAGAAGGAACCAACAATATCAGTATCCACTGAAACAAAGGGACAGTGGA
TCAAT------------------------------------TTGACCTACTA-CGCAGGCGGGACAAACCACACTTTAAT
TATTTAAATCCCTCTAATTATTTACTGTCATCTA-GGATCTTGCTTCTAGTCCAGAACTTTGGGTTTTTTTTATTTATGT
TGATAGATAAAACTAAACATTGTTCATGTGCAAAAGTTCATCCAGGGACCTTGCTTTACTGTCAATGTAAAAGCTCATCC
AGAAACACCATAATTTCTGTCAACACGAAAACCTACACTTCTATCAAAATTCAAATCAAGGTACTGGTTCTCACAAGAGT
CGGGTTCCAATGATTTTCAGGAGAGGAGAGGGATGGCCATGGAGGCAGCCAGTCTCATCGATGGACGCAGCAAACTGTTG
CAGATCGAAGCCATGGCCGCTGGGTGTCGGAGGAGGAGCA
>SNPs
----------------------------S------------------------------SSSSS----------S-----
----------------------S------------------------------------SSSS-----------------
-------------S----S----S-------------SS-----------------------------------------
---------------------------S------------------------S---------------------------
--S-----------------------S-----S--S----------------S---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
--------------------------------------------------------------------------------
-------------------------------------------------------S------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------S------------S------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------S----------------------S---------------
--------------------------------------------S-----------S-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------S--------------------------------------
------------S-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------S-----------------------S-----------------------
--------------------------------------------------------------------------S-----
-------------------------------------------------------------S-----------S------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------S--------
-----------------------S-------------------------------------------S--S---------
----------------------------S---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------S----------------S----------------------------------------SSSS
--SSSSSSSSS---------------------------------------------------------------------
-----------------------S-S-------------------------------------------S----------
---------S----------------------------S-----------------------------------------
-------------------------------------------------------------------------S---S--
-------S------------------------------------------------------------S----------S
--S----------------------S-----------------S------------------------------------
S---SS----S--S--------------------------S--------------------------S-S-S-S--S--S
-S--S----------SS-SS---SS----------------------S-SS-SSSSSSSSSSS---------S-------
------S-------------------------------------------------------------------------
-----------S----S-S---------------------------------------------------S---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------SSSSSSSS---------------------------------------
--------S-----------------------------------------------------------------------
---------------------------S-------------------------------------S--------------
----------------------------------------
>forward_636
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------TGTTGCTTGAGTCTTTGGTGG----
--------------------------------------------------------------------------------
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----------------------------------------
>reverse_2234
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------TCCAGAG
GTATTGGCTTGCTG------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------
>forward_1642
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------TGGTGTCTGCTGGTTTCTCC--------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------
>reverse_2739
--------------------------------------------------------------------------------
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------------------TCTCTTCCACCAATGCAGCC------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------
>forward_2471
--------------------------------------------------------------------------------
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---------------------------------------------------ATTTCCCTGCTAGCAATGGC---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------
>reverse_3532
--------------------------------------------------------------------------------
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-----------TCCTCAAACCACACATCCCC-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------
