>input_sequence_43788
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-----------GCCACGGCTTCCGCTGCACGCCATTACCGAAGCGCCCCCTCCTTCGCCAAGTGTCCCGCTCCCTCCTCC
GGCCAATGTGACTTGCGGCCGTCGAAGCCGCGGCAGGGGAAGGAGCGAAGCGATGGTGGTCAGGTGCGTGCACGCCGATG
CGGGTGGCTTCCGGCTCTGGCCGGTCTTCTCGGCCGCCGCCATGCGGAGGAAGCTTCTTGAGGTGCTCACGTGCGGCGGC
GGCGGCGG------TTCTTGCCGCGGCCGGACGTCCTTCCGGTCGCCCCAGCCGCGCGCGCCGTCGCAGTCGCAGCCGAG
GCCCCGGTCGGACCGGCTGGCGGAGCTGCTCCGGGCGGAGCCGTCCGAGTGCGGCGACGACGAGGGCGAGGCTGACGCGG
CCGCCAGGAAGTCGGCGGCGCTGGAAGAGCTCAAGGTCGTCGTCGCTGCCCTTCAGGACGGAGAGGGAGATGTTAACGGT
GGCGTCTCGTGGCGCGTCGAGGCGGCCACGGTCGTGCGGAGGAAGGCCAAGGACGACGCCATGGCCAGGGAG---ATGCT
CGCGATGCTCGGCGCCATCCCACCGCTCGTCGCCATGCTCGACCAGGGCGGAGGCGGCGACGAGCTCCTGGCCGCCGCGC
TGTACGCGCTCCTCAACATGGGGATCGGCAATGACACGTGAGTCTTCTGTTCCGCCACGCGCT---------CCTCTGTT
TCTTGTTGATCAGATCTGGGGTGCTCGGCTTCTGATTCTGCGGG-AGGCGTCTGGTTCGATTCGCAGGAACAAGGCCGCG
ATCGTCCAGGCCGGCGCCGTGCACAAGATGCTCCGCATTGCCGAGGCCGCGTCCGGCGCTCTGACGGGGGCGCTCGTCGC
CAACTTCCTCTGCCTCAGCGCGCTGGACGCGAACAAGCCCATCATCGGCGCCTCCGGGGCGGCGCCCTTCCTCGTGCGCG
CGTTCGAGGCCGCGGCCACCGAGCAGGTCCGGCACGACGCCC--TGCGCGCGCTCCTCAACCTCTCCATCGCGGCGGCGA
ACGCGCCGCACCTGCTGTCCGCGGGGCTGGCGCCGTCGCTGATCGCCGCCATCGGGGACATGTCGGCGTCGGACCGCGCC
CTCGCCGCGCTCTGCAACGTCGTGGCCGCCTGCCCCGAGGGCCGGCGCGCGGTGAGCCGCGCCCCGGACGCGGTGCCGGT
GCTCGTGGACGTGCTCAACTGGTCCGACGACGCCGGGTGCCAGGAGAAGGCGGCGTACGTGCTGATGGTGCTGGCGCACC
GGAGCTACGGCGACCGCGCGGCCATGGCGGAGGCCGGCGCCACGTCGGCGCTGCTGGAGCTGACGCTGGTGGGCACGGCG
CTGGCGCAGAAGCGCGCGTCGAGGATCCTGGAGATCCTGCGCGCCGACAAGGGCAAGCAGCAGGTGGCCGACGCGTCCGG
CGTCGCGGCCACGGTGTCGGCGCCGCAGGAGCGCGGCGTCGGCGGCGGCGGGCGGTGCCAGGAGGA---------GGAGG
AGGAGGAGGCGGAGGGGGAGGCCTGCTGCATGAGCCACGAGAAGCGCGCCGTGCGGCAGCTGGTGCAGCAGAGCCTGCAG
AGCAACATGCGGCGGATCGTGCGGCGCGCGCGGCTCCCGCAGGACCTGGCGCCGCCGGACGGCAGCCTCAAGGCGCTCTC
CTCCTCCTCCACCTCCAAAAGCCTGCCGTTCTAACTTCTAAGCCAGCCCAACCGCAGGTAAAAAATAAC-ACAAGCTCAT
CCACATTCCTTGCTTCGGTGCCACACAATGGCAGTAACAAATACAGTTCGTCGCA-------------------------
--------------------------------------------------------------------------------
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------------------------------------
>chr5A_1_TraesCS5A01G225800
AACCCTAACTTGATCTTAGTTTATATTTGGTCGTGCCCGGTAAGTCATATATGCATGGGTCTTTGAGATTTATAAATATT
GCCTCTTATCGTCGGGCCTTTGAGATTGAGGAATTTTTGAAATGCACATGGGCCAAGACAATGCACGGGGCGATTTAAAT
GCGCCTTTGAATCTGAATAGATGATGAAGA-----------------------GAAGTAAAGTGAAAAGCAAATTAATTA
AGGTAGACCCTTTTATAAACCAAAAGGGATAGAGTAGTGTGCTTTACCAGCACATGGTAGTATATATTGTCACGATAGAT
GTAGTATTAATCATGCCTGATAGATGTATTGATCATACGTGCT-----AGAATTGCAATCCGCATGTTAAATACCAATCA
GCAAATGCGCCTGATCCGGTCGTATCATCAGGGCGTGTGATACCGACAAGAGCCAATCAGCGGGAGTGGACTGGTAGTAG
GAGTATCTTGGACTTCTCTGTCGGCGGAGCTACAAAATCTTGTGCTGCGTCAATGCAGACATGGGTGCGCGGCGGCGTGT
CAAGCAAGTGGCACTGCATACACACAGTAACTACGC-CGCCTCATCACTCTCATCCCACAACTGCTACTCCCAGACTGTA
AATGAGCCACGATAGATCCCAGATTTGCACTGCCGCCAGTCCTTCCGAGTAATAACAGAGATAATAAACCAACTTTA-AA
CACTTATTAAGATCACTAAATTTGCCCCACCATCCTGCACACCAGGCCCGATCAAGTACTTTTAA------CTCGCTT--
----------GTCTGCCAATGGCCTGGTGCCGCATTTTTT-AACGCATTTTTTGGTCGCCTCCTCGATGGCCCTCCACTG
CGAAACCCAACTGTAAATCCAGCATTGATGGCGTCCCCTCGGTTTTTAATCGTCCCC--TCCATTTTTTTATCCTGGCCG
CGTGGGCCCGCCCTGTCAGTCCTCAGCGACCACCTTGCCTGCCTTTCACACGGGCGGAGTATAAACCCTCTCTGTTACTA
CGCCGCGCCGCGCCACGGCTTCCGCTGCACGCCATTACCGAAGCGCCCCCTCCTTCGCCAAGTGTCCCGCTCCCTCCTCC
GGCCAATGTGACTTGCGGCCGTCGAAGCCGCGGCAGGGGAAGGAGCGAAGCGATGGTGGTCAGGTGCGTGCACGCCGATG
CGGGTGGCTTCCGGCTCTGGCCGGTCTTCTCGGCCGCCGCCATGCGGAGGAAGCTTCTTGAGGTGCTCACGTGCGGCGGC
GGCGGCGG------TTCTTGCCGCGGCCGGACGTCCTTCCGGTCGCCCCAGCCGCGCGCGCCGTCGCAGTCGCAGCCGAG
GCCCCGGTCGGACCGGCTGGCGGAGCTGCTCCGGGCGGAGCCGTCCGAGTGCGGCGACGACGAGGGCGAGGCTGACGCGG
CCGCCAGGAAGTCGGCGGCGCTGGAAGAGCTCAAGGTCGTCGTCGCTGCCCTTCAGGACGGAGAGGGAGATGTTAACGGT
GGCGTCTCGTGGCGCGTCGAGGCGGCCACGGTCGTGCGGAGGAAGGCCAAGGACGACGCCATGGCCAGGGAG---ATGCT
CGCGATGCTCGGCGCCATCCCACCGCTCGTCGCCATGCTCGACCAGGGCGGAGGCGGCGACGAGCTCCTGGCCGCCGCGC
TGTACGCGCTCCTCAACATGGGGATCGGCAATGACACGTGAGTCTTCTGTTCCGCCACGCGCT---------CCTCTGTT
TCTTGTTGATCAGATCTGGGGTGCTCGGCTTCTGATTCTGCGGG-AGGCGTCTGGTTCGATTCGCAGGAACAAGGCCGCG
ATCGTCCAGGCCGGCGCCGTGCACAAGATGCTCCGCATTGCCGAGGCCGCGTCCGGCGCTCTGACGGGGGCGCTCGTCGC
CAACTTCCTCTGCCTCAGCGCGCTGGACGCGAACAAGCCCATCATCGGCGCCTCCGGGGCGGCGCCCTTCCTCGTGCGCG
CGTTCGAGGCCGCGGCCACCGAGCAGGTCCGGCACGACGCCC--TGCGCGCGCTCCTCAACCTCTCCATCGCGGCGGCGA
ACGCGCCGCACCTGCTGTCCGCGGGGCTGGCGCCGTCGCTGATCGCCGCCATCGGGGACATGTCGGCGTCGGACCGCGCC
CTCGCCGCGCTCTGCAACGTCGTGGCCGCCTGCCCCGAGGGCCGGCGCGCGGTGAGCCGCGCCCCGGACGCGGTGCCGGT
GCTCGTGGACGTGCTCAACTGGTCCGACGACGCCGGGTGCCAGGAGAAGGCGGCGTACGTGCTGATGGTGCTGGCGCACC
GGAGCTACGGCGACCGCGCGGCCATGGCGGAGGCCGGCGCCACGTCGGCGCTGCTGGAGCTGACGCTGGTGGGCACGGCG
CTGGCGCAGAAGCGCGCGTCGAGGATCCTGGAGATCCTGCGCGCCGACAAGGGCAAGCAGCAGGTGGCCGACGCGTCCGG
CGTCGCGGCCACGGTGTCGGCGCCGCAGGAGCGCGGCGTCGGCGGCGGCGGGCGGTGCCAGGAGGA---------GGAGG
AGGAGGAGGCGGAGGGGGAGGCCTGCTGCATGAGCCACGAGAAGCGCGCCGTGCGGCAGCTGGTGCAGCAGAGCCTGCAG
AGCAACATGCGGCGGATCGTGCGGCGCGCGCGGCTCCCGCAGGACCTGGCGCCGCCGGACGGCAGCCTCAAGGCGCTCTC
CTCCTCCTCCACCTCCAAAAGCCTGCCGTTCTAACTTCTAAGCCAGCCCAACCGCAGGTAAAAAATAAC-ACAAGCTCAT
CCACATTCCTTGCTTCGGTGCCACACAATGGCAGTAACAAATACAGTTCGTCGCACTAGTTGTTTTTGTCAGTTGATCGG
CTCACTGTCATGTCAATGTTCTACGGTAGCATTTTGTCTGTCACCGCCAGATCAGTCGACCAACAACGGCTAACTAAACA
AGGAATCTGATCACGGGGAC-TTCCATCCTTGCTTCTAATCACGCTGTCACAGATGACAGAACCTACCAAGACCAAATTT
TGTTTTCG---------TACTCTTG----ACAAATTAAGAGCTGCTG---------------------------------
--------------GACCGGTTTAATA----------------------------------------AAGAAAACCAGGG
TGGAAGTGGAACTGGAAGCAGGGTCGGGGGGTGTTTGTTTCCAGGGACTTTTTTGTGTAGGGACTAGGAAAAGTCCCTCT
TACAGACTTTTTTACCAAATGAGAGGGACTTTTTAGGACTAAACTAGGCATCTGGGACTAAAAGAAGAAGACTCTCAAGG
AGAGTCTTTTTGGGACTTTTTGAGACTTCTCCAATAATGCCCCTTCATGCACCCATTGACCCGCCACCACGTGGTGTTGT
TTGACTGTTATTTTTCTATATAGTAGGGGCAACATGGTTATTTAATAACCTCTAGGAAGGAACTAATAACTTTTTAGTCT
CTGAAAACAAACAGGGAGGGACTTTTTAGTTGGGACTAGAAAAAGTCCTAGGACTAGAAAACCAAACACCACCTAAAAAA
AGTCTTTTTTAGAGACTTTTTTACCAAACGGGTGGGACTTTTTAGGGACTAAACTAGGCATTTGGGACTAAATGAAGAAG
ACTCCCAAAGAGTCTTTTTTGGAACTTTTCCAACAATGCCCCTCCATGCATTCAATGGCCCGCCACTCCATGGTGTTGTT
GATTGTTATTTTTCTATATAGTAGGGTCAATATGATCATTTAATAACCTCTAAAAAGGGACTAGAGATTTTTTAGTCTCT
GAAAACAAACAGGGAGGAACTTTTTAGGGAATAGAAACTTTTTAGTTGGGATTAGAAAAAATCATAGGACTTATAAATCA
AACAGGGCCTCAATCCTATCCCATCCCTCCCTCTCT
>chr5B_151
--------------------------------------------------------------------------------
----------------------------------------------------------------------CGATTTAAAT
GCGCCTTTGAATCTGAATAGACGATGAAGAGAAGTTTTTTCGAACGATGAAGAGAAGTAAAGTGAAAAGGAAATTAATTA
AGGTAGACCCTTTTATAAACCAAAAGGGATAGAGTAGTGTGCTTTACCTGCACATGGTGATAGAT---------------
---GTATTAATCATGCGTGATAGATGTATTGATCATACGTGCTACACTAGAATTGCAATCCGCATATTAA-TACCCATCA
GCAAATGCGCCTGATACGGTCGTATCATCGGGGCGTATGATACCGACAAGGGCCAATCAGCGGGAGTGGACCG-------
--GTATCTTGGACTTCTCTGTCGGCGGAGCTACAAAATCTTGTGCTGCGTCAATGCAGACATGGGTGCGCGGCGGCGTGT
CAAGCAAGTGGCAGTGCATGCACACAGTAACTACGTACGCCTCATCACTCTC----------------------------
----AGCCACGATAGATCCCAGATTTGCACTGCCGCCAGACTTTCGGAGTAACGGAG------ATAAACCAACTTTTCAA
CACTTATTAAGATCACTAAATTTGCTCCACCATCCTGCACACCAGGCCTGATCAAATACTTTTAA------CTCGCCTGC
AGATCG--TCGTCTGCAAATGACCTGGTGTCGCATTTTTTTAACACATTTTTTAGTCGCCTCCTCGATGGCCCTCCACTG
CAAAATCCAACTGTAAATCCAGCATTGATGGCGTCC----GGTTTTTAATTGTTCCGCGTCCA-TTTTTTATCCTGGCCG
CATGGACCCACCCTGTCAGTGTTC-GTGACCACCTTGCCTGCCTTTCACACGGAGTATAAAC---CCCTCTCTGTTACTA
CGCCGCGCCGCGCCACGGCTTCCGCTGCACGCCATTACCGAAGCGCCCC-TCCCTCGCCAAGTGTCC----CCCTCCTCC
GGCCAATGTGACTTGCT---GTCGAAGCTGCGGTAGGGGAAGGAA-----CGATGGTGGTCAGGTGCGTGCACGCCGATG
CGGGCGGTTTCCGGCTCTGGCCGGTCTTCTCGGCCGCCACCATGCGGAGGAAGCTTCTTGAGGTCCTCACGTGCGGCGGC
GGCGGCGGCGGCGGTTCTTGCCGCGGCCGGAGGTCCTTCCGGTCGCCCCAGCCACGCGCGC------ACTCGCAGCCAAG
GCCGCGGTCCGACCGGCTGGCGGAGCTGCTCAGGGCGGAGCCGTCCGAGTGCGGCGACGACGAGGGCGAGGCGGACGCGG
CCGTCAGGAAGGCGGCGGCGCTGGAGGAGCTGAAGGTCGTGGTCGCCGCCCTTCAGGATCGAGAGGGAGACGTTGCCGGC
GGCGTCTCGTGGCGTGTCGAGGCGGCCACGGTCGTGCGGAGGAAGGCCAAGGACGACGCCATGGCCAGGGAG---ATGCT
CGCGATGCTCGGCGCCATCCCGCCGCTCGTCGCCATGCTCGACCAGGGTGGAGGCGGCGAGGAGCTGCTGGCCGCCGCGC
TGTACGCGCTCCTCAACATGGGGATCGGCAATGACACGTGAGTCTTCTGTTCCGCCACGCGCTTCTCGCGCTCCTCTGTT
TCTTGCTGATCAGATCTGGG-TGCTCGGCTTCTGATTGTGCGGGGAGGTGTTTGGTTTGATTCGCAGGAACAAGGCCGCG
ATCGTCCAGGCCGGCGCCGTGCACAAGATGCTCCGCATTGCCGAGGCCGCGTCCGGCGCTCTGACGGGGGCGCTCGTCGC
CAACTTCCTCTGCCTCAGCGCGCTGGACGCGAACAAGCCCATCATCGGCGCCTCCGGCGCCGCGCCCTTCCTCGTGCGCG
CGTTCGAGGCCGCGGCCACCGAGCAGGTCCGGCACGACGCCC--TGCGCGCACTGCTCAACCTCTCCATCGCGGCGGCGA
ACGTGCCGCACCTGCTGTCCGCGGGGCTCGCGCCGTCGCTCATCGCGGCCATCGGAGACATGTCGGCGTCGGACCGCGCC
CTCGCCGCGCTCTGCAACATCGTGGCCGCCTGCCCCGAGGGCCGGCGCGCTGTGAGCCGCGCCCCGGACGCGGTGCCGGT
CCTCGTGGACGTGCTCAACTGGTCCGACGAGGCCGGGTGCCAGGAGAAGGCCGCGTACGTGCTGATGGTGCTGGCGCACC
GGAGCTACGGCGACCGCGCGGCCATGGCGGAGGCGGGCGCCACGTCGGCGCTGCTGGAGCTGACGCTGGTGGGCACGGCG
CTGGCGCAGAAGCGCGCGTCGAGGATCCTGGAGATCCTGCGCGCCGACAAGGGCAAGC---AGGTGGCCGACGCGTCCGG
CGTCGTGGCCACGGTGTCGGCGCCGCAGGAGCGCGGCG---GCGGCGGAGGGCGGCGCCGGGAGGAGGGGGGCGAGGAGG
AGGAGGAGGCGGAGGGGGAGGCCTGCTGCATGAGCAATGAGAAGCGCGCCGTGCGGCAGCTGGTGCAGCAGAGCCTGCAG
AGCAACATGCGGCGGATCGTGCGGCGCGCGCGGCTCCCGCAGGACCTGGCGCCGTCGGACGGC---CTCAAGGCGCTCTC
CTCCTCCTCCACCTCCAAAAGCCTGCCGTTCTA-----------AGCCCCACCGCAGGTAAC-----AAAACAAGTTCAT
CCACATTCCTTGCTTCAGTGCCACACAATGGCAGTAACAAATACAGTTCATCGCACTAGTTGTTTTCGTCAGTTGATCAC
CCCATTGTCATGTCAATGTTGGA--GTAGCATTTTGTCTGTCACCACAGTCGG-------CAACAATGGCTAACTAAACA
AGGAATCTAATCACGGGGATTTTCCATCCTTGCTTCTAGTCACGCTGTCACAGATGACAGAACCTACCAAAACCAAATTT
TGTTTTTGTATTAGTCTTACTCTTG----ACAAATTAAGAGCTAGTGGTAC------TAGTCCACACAACACAGCACACA
CGAGTGGAGAACTCGACCGGTTTAATAAAGAAACCGCAGTGTCATCCATTTCCCACTTCGGAGTTTTAAGAAAACCAGGG
TGGAAGTGGAACTGGAAGCAGGGTC-------------------------------------------------------
--------------------------------------------------------------------------------
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>chr5D_362
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--------------------------------------------------------------------AA-TACCCATCA
GCAAATGCGCCTGATACGGTCGTATCATCAGGGCGTATGATACCGACAAGAGCCAATCAGCGGGAGTAGACTGGTAGTAG
GAGTATCTTGGACTCCTCTGTCGGCGGAGCTACAAAATCTTGTGCTGCGTCAATGCAGACATGGGTGCGCGGCGGCGTGT
CAAGCAAGTGGCACTGCATGCACACAGTAACTACGC-C---TCATCACTCTTTCCGCAA-----CTACTCCTAGACTGTA
AATGAGCCACGATAGATCCCAGATTTGTACTGCTGCCGAACTTTCGGAGTAACAGAG------ATAAACTAA--------
---------------------TTGCTCCACCATCCTGCACACCAAGCCTGATCAAATACTTTTAAGTTTAACTCGCTCGC
AGATCGATTCGTCTGCAAATGACCTGGTGCCGCA-TTTTTTAACACATTTTTTAGTCACCTCCTCGATGGCCCCCCACTG
CAAAATCCAACTGTAAATCCCGCATTGATGGCGTCC----AGTTTTTAATTGCTCCC--TCCA-TTTTTTATCCTGGCTG
CGTGGGCCCGCCCTGTCAGTCCTCGGTGACCACCT----TGCCTTTCACACGGACGGAGTATAAACCCTCTCTGTTACTA
CGCCGCGCCGCGCCACGGCTTCCGCTGCACGCCATTACCGAAGCGCCCCCTCCTTCGCCAAGTGTCCCCCTCCCTCCTCC
GGCCAATGTGACTTGCT---GTCGAAGCCGCGGTAGGGGAAGGAG-----CGATGGTGGTCAGGTGCGTGCACGCCGATG
CGGGTGGCTTCCGGCTCTGGCCGGTCTTCTCGGCCGCCACCATGCGGAGGAAGCTTCTTGAGGTGCTGACGTGCGGCGGC
GGCGGCGG------TTCTTGTCGCGGCCGGACGTCCTTCCGGTCGCCCCAGCCGCGCGCGC------AGTCGCAGCCGAG
GCCGCGGTCCGACCGCCTCGCGGAGCTGCTCAGGGCGGAGCCGTCCGAGTGCGGCGACGACGAGGGCGAGGCTGACGCGG
CCGCCAGGAAGTCGGCGGCGCTGGAGGAGCTCAAGGTCGTGGTCGCCGCCCTTCAGGATGGAGAGGGAGACGTTGCCGGC
GGCGTCTCGTGGCGTGTCGAGGCGGCCACGGTCGTGCGGAGGAAGGCCAAGGACGACGCCATGGCCAGGGAG---ATGCT
CGCGATGCTCGGCGCCATCCCGCCGCTCGTCGCCATGCTCGACCAGGGTGGAGGCGGCGAGGAGCTCCTGGCCGCCGCGC
TGTACGCGCTCCTCAACATGGGGATCGGCAATGACACGTGAGTTTTCTGTTCCGCCACGCGCT---------CCTCTGTT
TCTTGTTGATCAGATCTGGGGTGCTCGGCTTCTGATTCTGCAGG-AGGTGTTTGGTTTGATTCGCAGGAACAAGGCCGCG
ATCGTCCAGGCCGGCGCCGTGCACAAGATGCTCCGCATTGCCGAGGGCGCGTCCGGCGCTCTGACGGGGGCGCTCGTCGC
CAACTTCCTCTGCCTCAGCGCGCTGGACGCGAACAAGCCCATCATCGGCGCCTCCGGGGCCGCGCCCTTCCTCGTGCGCG
CGTTCGAGGCCGCGGCCACGGAGCAGGTCCGGCACGACGCCC--TGCGCGCGCTGCTCAACCTCTCCATCGCGCCGGCGA
ACGCGCCGCACCTGCTGTCCGCGGGGCTCGCGCCGTCGCTGATCGCCGCCATCGGGGACATGTCGGCGTCGGACCGCGCC
CTCGCCGCGCTCTGCAACGTCGTGGCCGCCTGCCCCGAGGGCCGGCGCGCGGTGAGCCGCGCCCCGGACGCGGTGCCGGT
GCTCGTGGACGTGCTCAACTGGTCCGACGACGCCGGGTGCCAGGAGAAGGCCGCGTACGTGCTGATGGTGCTGGCGCACC
GGAGCTACGGCGACCGCACGGCCATGGCGGAGGCCGGCGCCACGTCGGCGCTGCTGGAGCTGACGCTGGTGGGCACGGCG
CTGGCGCAGAAGCGCGCGTCGAGGATCCTGGAGATCCTGCGCGCCGACAAGGGCAAGC---AGGTGGCGGACGCGTCCGG
CGTCGTGGCCACGGTGTCGGCGCCGCAGGAGCGCGGCG---GCGGCGGAGGGCGGTGCCAGGAGGA---------GGAGG
AGGCGGAGGCAGAGGGGGAGGCCTGCTGCATGAGCAACGAGAAGCGCGCCGTGCGGCAGCTGGTGCAGCAGAGCCTGCAG
AGCAACATGCGGCGGATCGTGCGGCGGGCGCGGCTCCCGCAGGACCTGGCGCCGCCGGACGGC---CTCAAGGCGCTCAC
CTCCTCCTCCACCTCCAAAAGCCTGCCGTTCTA-----------AGCCCCACCGCAGGTAAAAAAAAAAAACAAGTTCAT
CCACATTCCTTGCTTCAGTGCCACACAATGGCAGTAACAAATACAGTTCGTCGCACTAGTTGTTTTTGTCAGTTGATCAC
CCCACTGTCATGTCAATGTTCTACTGTAGCATTTTGTCTGCCACCACCAGATCAGTCGACCAACAACGGCTAACTAAACA
AGGAATCTAATCACGGGGAT-TTCCATCCTTGCTTCTAATCACGCTGTCACAGATGACAGGACCCACCAAAACAAAATGT
AGTTTCTGCATTAATCTGATAGTGGTCGTACAAGTTAAGAGCTTCTAGTAGTAGTGTTAGTCCACACAACACAGCACACA
AGTGCAAAGCTCGATCG-GTTTTAATAAAGAAATCG-AGTGTCATCCATTTCCCAGTTGGGAGTTTTAAGAAAACCAGGG
TGGAAGTGGAACTGGAAGCAGGGTC-------------------------------------------------------
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>chr1D_1302
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------------------------------------------------------------------------------AG
GCCGCGGTCCGACCGCCTCACGTAGCTGCTCAGGGAGGAGCTGTCTGAGTGCGGAGATGACGAGGGCGAGGCGGACGCGA
TCGTCAGGAAGGTGGCGGCGCTGCAGGAGCTCAAGGTCATGGTCGCCGCCCTTCAGGATCGAGAAGGAGATGTTGTCGGT
GGCGTCTCGTGGCGCGTCGAGGCGGCCACGGTCGTACGGAGGAAGGCCAAGGACGACGCCATCGCCAGGGAGGAGATGCT
CGCGACGCAATGGCCAGGGTCAT---------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------GCGCTCGTCGC
CAACTTCCTTTGCCTCAGCGCGCTCGACACGAACAAGCCCATCATCGGCGCCTCCGGGGCCTCGCCCTTCCTCGTGCGCG
CATTCGAGGCCATGGCCAGCGAGCAGGTCCGGCACGACGCCCCCTGCGCGCGCTCCTCAACCTCTCCATCGCGGCGGCGA
ACGCACCGCACCTGCTGCCCGCGGGGCTCGCGC----------CGCCGCCATCGGGGACATGTCGGCGTCGGACC-----
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------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------
---------------------S-----------------------------------------------S----------
------------------------------------------------S---------SS--S--SSSSSSSSSSSSSSS
SSS-------------S------------------------------------------------S----S----S----
---------------S--------------------S-------------------------------------------
--------------------------------------------------------------------------------
-------------------S--------------------------------SS-S--SSSSSS-------S--------
---------------------------------------S-S---S------S-SSSSSSSSS-------------S---
-------------------------S----------------------S------S------------------------
----------------S----S----------------------S--------S--------------------------
-S---S------------------------------SSSS----------S--S---------S----------------
------------------------S-S--------------------------S--------------------------
--------------------------------------------------------------------S-----------
----------------SSSS-------------S-----------SSSSS------------------------------
--------------------------------------S-----------------------------------------
-------------------------------------------------------------SSSSSS-------------
---S-----S---------------------S------------------------------------------------
-------------------------S--------------S-----S-----------S---------------SS----
--------------------------------------------------------------------------------
------------------------------------------------S-----------S-------------------
--------------------------------------------------------------------------------
------------------------------------------------S--S-----S----------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S-------------------
--------------------------------------------------------------------------------
----------------------------S---------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S----------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------SSS-------------------
-----S--------------------------------SSS-------S-------------------------------
-----------------------------------S--------------------------------------------
---------------------------------------------------------------SSS--------------
---------------------------------SSSSSSSSSSS-----S---------------S--S------S----
----------------S-------------------------------------------------------------SS
-S----------------------S--------------------S----------------------------------
--------S----------S--------------------------------------------------S---------
------S------------------------------------S------------------------------------
--------------------------------------------------------------------------------
-------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_616
--------------------------------------------------------------------------------
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------------------------------------CCGCCTCATCACTCTCATCC------------------------
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>reverse_1812
--------------------------------------------------------------------------------
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---------------------------------------------------CTGGTTCGATTCGCAGGAAC---------
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>forward_693
--------------------------------------------------------------------------------
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---------------------------------CGCCAGTCCTTCCGAGTAAT---------------------------
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>reverse_1818
--------------------------------------------------------------------------------
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---------------------------------------------------------CGATTCGCAGGAACAAGGC----
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>forward_1481
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---------------------TGGAAGAGCTCAAGGTCGTC---------------------------------------
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>reverse_2926
--------------------------------------------------------------------------------
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---------------------------------------------GCCAGATCAGTCGACCAACA---------------
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------------------------------------
