>input_sequence_43778
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--------------ATGTCTGTCTAGGTCAAGCTGTTCTTAGGATGAGGTCCTCCAAGACTAATGGGAGCGTGCAGAAGG
CAGGGAGAGTTAGCCATGCCCAGGGAGAAGGGCCGAGCTGGGTTCTTGTCGCGGGAGGAGTTCTGGTTAGCACGCTCTCG
GTCAGACTTGGATGCAAGCTGAAGCAGATGTTTGATACCAAGAAGCAAAATAGTACATCCAGAGGTCTGATGCTCCCATT
TGCAGTTCTAGTTCTAATTGCAGTCATATGTGCAGTCTGCTGAGTACTGACTATCTGAATTTGCAGCCAAAAGAAGACCT
GGAGCTTGTGAACTACACTCCAATCTGTACCGGTTTGATGATGAAACCAATTGCTACTGCTGTGTCTCAGGTAACTTGTG
CTACAGCTTAATTTATGCT-TGTTGCCGAGTATTCATGAGGTTGCAGCAAACTTTGCACCCTGCAGTGTTGAGTTTTTTC
AGCTGGCATTGTAAATACAGTAACACAGTTGATGTCATTAACTATCATTGCATCATTGGATTATGAGATTACAGTTATGT
AATCTTCCATACCTTGAACATAATCCATGAGTACTAAGCATGAAGCAAAAAATTAATCCACAAACTGGCAGTATACTGAC
AAAGTGGCTATATAGCGAGTTTAGCATTGTTAAATTGCACTGTTACAC-------CCTTGACTGGGCTAACACTGGACGC
TGTCTTGCTATTTTTATT--TGACTTAATAGTTGTTGCAAAAAAGGCAGAAACAATGTTAACTGTTGGTTGTTATGTGCG
GGAATTGCAGATGGTGGAGTGGAAATCAAGCAAGCACCTGCAAGTTCTTTATCGAAACCTGATGAACCCTCCCTTCCTCT
TGCAAAGATACCAGGGCCAGAATCAAGCAAAGAGAACAGTGGCGTCATGTGGACGTCATCGCCTGACCGGCTTGAAGATC
ATCGCAGACCATTGCAGTACTCAAACAGTTCTGGCTCTCCCTGTGTTTCAGAATCAGGATCTGACATTTATATCAAGAGA
GAGGTCATACAGAAGTTGAGACAGCACCTCAGGAGACGTGATGAGATGATCATGGAGATGCAAGCACAGATAGCTGATCT
TAAGAACTCTCTCAGCATCGAGGAGACGCAGACCGCCAATTTGCAGTCCCAGCTGGATGGTGCCAATCGAGATCTGTTCG
AATCCGACAGGGAGATCCAGCAGCTAAGGAAGATCATCGCAGATCATTGTGTGGCTGAAGCACTCTCCCGCGACAAGCCC
TTGCAAGCTGGAAACTGGCAACCAGATGCCGCCAATGGGCATGCTAATGGCTATGCTGATAGCAGCATCGATGACCCTGA
GCTGCACTGTATTGGTATTGAGAAGAGGAACGGCGAGGCAGAGAGGGTGGAGATGCTCAAGAGAGAGGTCGGCGAGCTGA
AGGAGGTCATCGAAGGGAAGGACTTCCTGCTCCAGAGCTACAAGGAGCAGAAGGTGGAGCTCTGCTCGAAGATGAGAGAG
CTGCAGGAAAGGCTCTCGGCACAGGTGCCCAACATCTTGTAGGATCTACTCGTCAACCTCGCT--AAGGCGCAGTTTGCA
AGGGCTAATGTAGCTAGCAAATTGGTGTCGTCAAGGGATTCACAGGAAAAGATTTCGTCGCACGTGCTAGGGTCTTTGCA
GAATGTTTACATTGATTTG-TTTCTTTCCTCTCAGTTTCTGTCATTGGTTGCTCAGTGTCAG-AAAAAGGGCTTAGTTTT
TTCTTTTTCAGTTGCTAGGGCTAAGGTAGCTTTAGATTGAA---------------------------------------
--------------------------------------------------------------------------------
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>chr1A_1_TraesCS1A01G427500
CTAAAAGCTAGCCGATACCTACTTTTCAGCGAAGGGC-----------TCGATGGTTCTCCTCAGCCCGGCCCAGGCCCA
ACATAACGCAGGCCGAAATCCCAAGCAGCCCCCGCAGTTCGTCTCTCCCTCCGCTCAGAG------CCCTCACTCCCCCA
ACTCTCGCCAGGTGGCGGCGTCGGCGGCGGCG--GGCGGGCGATCGGCGGGGCAGGTCCACGGCGTCCGTGCACCGGGCA
GGCACGCGGGAGCTGCCGGAGCAGCTGCCGACCGATAGGCCGACCGTCTGGTGAGTGGTGAGACCCCTCCTCGCCCCGTA
ACCTCCCCAGATCCAGTA----GCGCCAGGTCCCGTCTGGCTGGAAATAGCCGACTGAGGCGCTGGGCGTGCCATTAGCG
CCGCCCAGAGGAGCAGGAGTCGACGCCGTTAGGGTTCTAGGAACCGCGGGGGTGGCTGTGGTTGTCCTTAGAACTAGCTG
GCCGCCGCCGCCG----TTTCTCGAGCTAGCTCCCTCCATGGATGGAT----TATTGCTGTTGTGGTGAGATCCCGAGCC
GCCAGACTCGAGGGAGATGCAACTCCTCTTGCTTAGACGCAACTCCTCTTGGTCAGAAATCTAGGATGCACTCAAAAAAG
GAACCTAGGATGCATTTGTACATGTGTGGTGTGGTCCTCCATTTCACTCATGTACACGCCACCCTCAGACTTGAATGCCA
AGCGAGATGCCCGTGTTATGTGCCCAGTTCACTCACTTGGGTCGTGTAATTCAGTTCACTGCAACAAAAA-TTGCTGCTG
CAGAGCATAACCTTGTTTTGCCCC-------TGTGATCCATATTTGCATATCTGATGTTGCTGCTGAAG---CAGCAGCA
GCATAATCTTGTCTTACCACTGTGATCCATATTTGTATGGGCGAGACTAAGATCGGAT-----------AGTGGCCTTCG
CACTTCCTTTTCTGTATTTGTATGAGTGAAATGTACCACTCC-TTTTCCTATACTGCATGGAAATAATGATGCCGAACAT
GTTGTGATGCGTACATGTCTGTCTAGGTCAAGCTGTTCTTAGGATGAGGTCCTCCAAGACTAATGGGAGCGTGCAGAAGG
CAGGGAGAGTTAGCCATGCCCAGGGAGAAGGGCCGAGCTGGGTTCTTGTCGCGGGAGGAGTTCTGGTTAGCACGCTCTCG
GTCAGACTTGGATGCAAGCTGAAGCAGATGTTTGATACCAAGAAGCAAAATAGTACATCCAGAGGTCTGATGCTCCCATT
TGCAGTTCTAGTTCTAATTGCAGTCATATGTGCAGTCTGCTGAGTACTGACTATCTGAATTTGCAGCCAAAAGAAGACCT
GGAGCTTGTGAACTACACTCCAATCTGTACCGGTTTGATGATGAAACCAATTGCTACTGCTGTGTCTCAGGTAACTTGTG
CTACAGCTTAATTTATGCT-TGTTGCCGAGTATTCATGAGGTTGCAGCAAACTTTGCACCCTGCAGTGTTGAGTTTTTTC
AGCTGGCATTGTAAATACAGTAACACAGTTGATGTCATTAACTATCATTGCATCATTGGATTATGAGATTACAGTTATGT
AATCTTCCATACCTTGAACATAATCCATGAGTACTAAGCATGAAGCAAAAAATTAATCCACAAACTGGCAGTATACTGAC
AAAGTGGCTATATAGCGAGTTTAGCATTGTTAAATTGCACTGTTACAC-------CCTTGACTGGGCTAACACTGGACGC
TGTCTTGCTATTTTTATT--TGACTTAATAGTTGTTGCAAAAAAGGCAGAAACAATGTTAACTGTTGGTTGTTATGTGCG
GGAATTGCAGATGGTGGAGTGGAAATCAAGCAAGCACCTGCAAGTTCTTTATCGAAACCTGATGAACCCTCCCTTCCTCT
TGCAAAGATACCAGGGCCAGAATCAAGCAAAGAGAACAGTGGCGTCATGTGGACGTCATCGCCTGACCGGCTTGAAGATC
ATCGCAGACCATTGCAGTACTCAAACAGTTCTGGCTCTCCCTGTGTTTCAGAATCAGGATCTGACATTTATATCAAGAGA
GAGGTCATACAGAAGTTGAGACAGCACCTCAGGAGACGTGATGAGATGATCATGGAGATGCAAGCACAGATAGCTGATCT
TAAGAACTCTCTCAGCATCGAGGAGACGCAGACCGCCAATTTGCAGTCCCAGCTGGATGGTGCCAATCGAGATCTGTTCG
AATCCGACAGGGAGATCCAGCAGCTAAGGAAGATCATCGCAGATCATTGTGTGGCTGAAGCACTCTCCCGCGACAAGCCC
TTGCAAGCTGGAAACTGGCAACCAGATGCCGCCAATGGGCATGCTAATGGCTATGCTGATAGCAGCATCGATGACCCTGA
GCTGCACTGTATTGGTATTGAGAAGAGGAACGGCGAGGCAGAGAGGGTGGAGATGCTCAAGAGAGAGGTCGGCGAGCTGA
AGGAGGTCATCGAAGGGAAGGACTTCCTGCTCCAGAGCTACAAGGAGCAGAAGGTGGAGCTCTGCTCGAAGATGAGAGAG
CTGCAGGAAAGGCTCTCGGCACAGGTGCCCAACATCTTGTAGGATCTACTCGTCAACCTCGCT--AAGGCGCAGTTTGCA
AGGGCTAATGTAGCTAGCAAATTGGTGTCGTCAAGGGATTCACAGGAAAAGATTTCGTCGCACGTGCTAGGGTCTTTGCA
GAATGTTTACATTGATTTG-TTTCTTTCCTCTCAGTTTCTGTCATTGGTTGCTCAGTGTCAG-AAAAAGGGCTTAGTTTT
TTCTTTTTCAGTTGCTAGGGCTAAGGTAGCTTTAGATTGAACTTGGATGAGTGTTGTACAGGTATTTCGGTCTTG-AGGC
GTGATCATGTAATGTGCCCCCTCTTTTAGCTCAGCGTGGTTTACGCCGGTGTGGCTTCGAATATGTGGATGCTTACATTT
CTGAAGTTTGCTTTGCTAGACACATCTGCCATGCATGTTTAAGAGAGAGAGAGAGAGAGAGNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAGAGA
GAGAGAAATGGCTTTGTTTCTCTGTGTGTTTCTGATGCCGTGTGTTTGCAAAGACAGTTCAGTTCACTCCAGAAAATTGA
TGGATTGAGCAGCCTATAACAAATGGGCTTCATGTGTAATGGGCACCA----------------------------ATGG
AGCTCATCCATTCAGATTCCAAACAGGAAGCCCAGACCTT-----GTTATAATCTGATTAGGCTTGTGTAACTAGAGAGT
ACCCGTTAATGAGTGATACCTGCTTGGTGCTTTGCTTCATCACCGAAGAGTTTCTATCCTAGAATAGAATGTAGTAATGT
TTCCTTCATTCCTGTGACAATCTTAACTAG--TATATGCTGTTGCCCTGCGAGAGGGCACCATCTGAACCCATGGGCATA
TGCACCCACTTTTCATAAAATGCATTTTAAGCACGTTGTAAAATATCAAAAAAATCAAAAGAAAATATCACGCATACATG
TTTGCAAATGTGTGTACGCGGCACAAAGTTTTATGAAAAGATGTCTTTTTGTTTTGCCTCCGTAAAAAAGACAAATTTCA
GTGCTTCTAAATAGTGTTTCACGACATAATTTTTTGT
>chr1D_1
CTAAAAGCTAGCCGATACCTACTTTTCAGCGAAGGGC-----------TCGATGGTTCTCCTCAGCCCGGCCCAGGCCCA
ACATAACGCAGGCCGAAATCCCAACCAGCCCCTCCAG-TCGTCTCTCCCTCCGCTCAGAG------CCCTCACTCCCCCA
ACTCTCGCCAGGTGGCGGCGTCGGCGGCGGCG--GGCGGGCGATCGGCGGGGCAGGTCCACGGCGTCTGTGCACCGGGCA
GGCACACGGGAGCTGCCGGAGCAGCCGCCGACCGATAGGCCGACCGTCTGGTGAGTGGTGAGACCCCTCCTCGCCCCGTA
ACCTCCCCAGATCCAGTA----GCGCCAGGTCCCGTCTGGCTGGAAATGGCCGGCTGATGCGCGGGGCGCGCCATTAGCG
CCGCCGAGAGGAGCAGGAGTCGGCGCCGTTAGGGTTCTAGGAACCGCGGGGATGGCTGTGATTATCCTTAGAGCTAGCTG
GCCGCCGCCGTCG----TTTCTCGAGCTAGCTCCCTCCATGGATGGATGGATTATTACTGTGGCAGTGAGATCCCGAGCC
GCCAGACTCGACGGAGATGCAACTCCTCTTGCTTAGATGCAACCCCTCTTGGTCAGAAATCTAGGATGCACCCAAAAAAG
AAACCTAGGATGCATTTGTACATGTGTGGTGTGGTCCTCCATTTCACTCATGTACACGCCACCCTCAGACTTGAATGCCA
AGCGAGATGCCCGTGTTATCTGCCCAGTTCACTCACTTGGGTCGTGTAATTCAGTTCACTGCAACAAAAA-TTGCTGTTG
CTGTTGC------TGTTTTACCCC-------TGTGATCCATATTTGCATAT-TGCTGTTGCTGCTGAAGTAGCAGCAGCA
GCATGATCTTTTCTTGCCACTGTGATCCATATTTGTATGGGCGAGACTAAGATCGGAT-----------AGCGGCCTTCG
CACTTCCTTTCCTGTATTTGTGTGGGCGAAATGTACCATTCTTTTTTCCTGTACTACATGGGAACCATGATGGTTGACAT
GTTGTGATGCGTACATGTCTGTCTAGGTCAAGCTGTTCTTAGGATGAGGTCCTCCAAGACTAATGGGAGCGTGCAGAAGG
CGGGGAGAGTTAGCCATGCCCAGGGAGAAGGGCCGAGCTGGGTTCTTGTCGCAGGAGGAGTTCTGGTTAGCACGCTCTCG
GTCAGACTTGGGTGCAAGCTGAAGCAGATGTTTGATACCAAGAAGCAAAATAGTACATCCAGAGGTCTGATGCTCCCATT
TGCAGTTCTAGTTCTAATTGCAGTCATATGTGCAGTCTGCTGAGTGCTGACTATCTGAATTTGCAGCCAAAAGAAGACCT
GGAGCTTGTGAACTACACTCCAATCTGTACCGGTTTGATGATGAAACCAATTGCTACTGCTGTGTCTCAGGTAACTTGTA
CTACAGCTTAATTTATGCTCTGTTGCCGAGTATTCATGAGGTTGCAGCAAACTTTGCAGTCTGCAGTCTTGAGTTTTTTC
AGCTGGCATTGTAAATACAGTAACGCAGTTGATGTCATTAACTATCATTGCGTCATTGGATTATGAGATTACAGTTATGT
AATCTTCCATACCTTGAACATAATCCATGAGTACTAGCCATGAAGCAAAAAATTAATCCACAAACTGGCAGTATACTGAC
AAAGTGGCTATATAGCGAGTTTAGCATTGTTAAATTGCACTGTTACAC-------CCTTGACTGGGCTAACACAGGATGC
TGTCTTGCTATTTTTATTTATGACTTAACAGTTGTTGC-AAAAAGGCAGAAACAATGTTAACCGTTGGTTGTTATGTGCG
GGAATTGCAGATGGTGGAGTGGAAATCAAGCAAGGACCTGCAAGTTCTTTATCGAAACCTGATGAACCCTCCCTTCCTCT
TGCAAAGATACCAGGGCCAGAATCAAGCAAAGAGAACAGTGGCGTCATGTGGACATCATCTCCTGACCGGCTTGAAGATC
ATCGCAGACCATTGCAGTACTCAAACAGTTCTGGCTCTCCTTGTGTTTCAGAATCAGGATCTGACATTTATATCAAGAGA
GAGGTCATACAGAAGTTGAGACAGCACCTCAGGAGACGTGATGAGATGATCATGGAGATGCAAGCACAGATAGCTGATCT
CAAGAACTCTCTCAGCATCGAGGAAACGCAGGCCGCCAATTTGCAGTCCCAGCTGGATGGTGCCAATCGAGATCTGTTCG
AATCCGAGAGGGAGATCCAGCAGCTAAGGAAGATCATCGCGGACCATTGTGTGGCAGAAGCACTCTCCCGCGACAAGCCC
TTGCAGGCTGGAAACTGGCAACCAGATGCTGCCAATGGGCATGCGAATGGCTACGCTGATAGCAGCATTGATGACCCTGA
GCTGCACTGTATCGGTGTTGAGAAGAGGAATGGTGAGGCAGAGAGGGTGGAGATGCTCAAGAGAGAGGTCGGCGAGCTGA
AGGAGGTGATAGAAGGGAAGGACTTCCTGCTCCAGAGCTACAAGGAGCAGAAGGTGGAGCTCTGCTCGAAGATGAGAGAG
CTGCAGGAAAGGCTCTCGGCGCAGGTGCCCAACATCTTGTAGGATCTACTCCACAAGCTCGCTACAAGGCGCAATTTGCT
AGGGCTAAGGTAGCTAGCAAATTGGTGTTGTCAAGGGATTCACAGGAAAAGATTTCGTCGCACGTGCTAGGGTCTTTGCA
GAATGTTACGTTGATTCGTTTTTCTTTCCCCTCAGTTTTAGTCCTTGGTTGCTCAGTGTT-AAAAGAAGGGCTTACT---
---TTTTTCAGTTGCTAGGGCTAGGTAGGATAC----TGGACCTGGATGAGTGTTGTATAGGTTTTTCGGGTTTGCAGGC
GTGATCGTGTTACGTGCCCCCTCTTTTAGCTCGGCGTGGTTTAGGCCAGTGCGGCTTCAAATTTGTGGACTTTTTTTT--
--------------------------------------------------------------------------------
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---AGTAATGGCTTTGTTTCTCTGTATGTTTCTGATGCCTTGTGTTTGCAAAGGCAGTTCAGTTGATTCCAGAAAATTGA
TGGATTGAGCAGCCTGTAACAAATGGGCGTCATGTGTATGGACATCACAGCCTGTAGCACTCAACTGCTCTGTACCATGG
GACTCATCCATTCAGATACCAAGTACAAGGCCCAAACCTTTCCTTGTTACAAGCTGATTAGGCC--TGTAACCAGAGAGT
GCCCATCAATGGATGGTACCTGCTTGGTGCTTTGCTTCATCACTGAAGAGTTTCTATCCTAGAA-----TGTAGTAATGT
TTCCTTCATTCCTGTGACAATCTTAACTACTAT-----------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------
>chr1B_1
CTAAAAGCCAGCCGATACCTACTTTTGAGCTAAGGGCCCATCGCATGCTCGACTGTTCTCCTCAACCCGGCCCAGGCCCA
ACATAACGCAGGCCGAAATCGCAACCAGCCCCCGCAG-TCGTCTCTCCCTCCGCTCAGAGCCCGAGCCCTCACTCCACCA
ACTCTCGCCAGGTGGCGGCGTCGGCGTCGGCGGCGGCGGGCGATCGGCGGGGCAAGTCCACGGCGTCCGTGCACCGGCCG
GGCGCACGGGCACTGACGGAGCAGCTGCCG-----------GACCGACTGGTGAGTGGTGAGACCCATCCTCGCCCCGTA
ACCTCCCCAGATCCAGTCCCCCGCACCAGGTCCCGTCCGGTTGGAAATGGCCGACTGATGCGCGGGGCGCGCCATTAGCG
CCGCCGAGAGGAGCAGGGGTCGACGCCGTTAGGGTTCTATGAACCGCGGGGATGGCCGTGATTGTCCTTAGAGCTAGCTG
GCCCCCGCCGTCGTTTATTTCTCGAGCTAGCTCCCTCCATGGATGGAT----TATTGCCGTGGCAGTGAGATCCCGAGCC
GCCAGACTCGAGGGAGACGCAACTCCTCTTGCTTAGATGCAACCCCTCTTGGTCAGAAATCTAGGATGCTCTCAAAAAAG
AGACCTAGGATGCATTTGTACATGTGTGGTGTGGTCCTCCAGTTCATTCATGTACACGCCACCTTCAGACTTGAGTGCCA
AGCGAGATGCCCGTGTTATCTGCCCAATTCACTCACTTGGGCCGTGTAATTCAGTTCATTGCAGCAAAAAATTGCTGCTG
CAGAGCATAATCTTGTTTTACCCCTGTGAATTGTGATCCATATTTGCATAT-TGCTGTTGCTGCTGAAA---CAGCAGCA
GCATAATCTTGTCTTACCACTGTGATCCATATTTGTATGGGCGAGACTAAGACCGGATGCAGATCGGATAGCGGCCTTCC
CACTTCCTTTTCTGTATTTGTGTGGGCGA-ATGTACCATTCTTTTTTCCTGTACTGCATGGGAACCATGATGCTTGACAT
GTTGTGATGCGTACATGTCTGTCTAGGTCAAGCTGCTCTTAGGATGAGGTCCTCCAAGAGTAATGGGAGCGTGCAGAAGG
CGGGGAGAGTTAACCATGCCCAGGGAGAAGGGGCGAGCTGGGTTCTTGTCGCAGGAGGAGTTCTTCTGAGCACTCTTTCA
GTCAGATTTGGGTGCAAGCTGAAGCAAATGTTTGATACGAAGAAGCAAAATAGCACCTCCAGAGGTCTGATGCTCTCATT
TGCACTTGTAGTTCTAACTGCAGTCATATGTGCTGTCTGCTGAGTGCTGACCATCTGAATTTGCAGCCAAAAGAAGGCAT
GGATCTTGTGAACTACACTCGAATCTGTACCGTTTTGATGATGAAACCAATTGCTACTGCTGTGTCTCAGGTAACTTGTG
CTACAGCTTAATTTATGCTCTGTTGCCGAGTATTCATGAGGTTGCAGCAAACTTTGCAGTCTGCAGTGTTGAGTTTTTTC
AGCTGGCATAGTAAATACAGTAACTCAGTTGATGTCATTAACTGTCATTAC--CATTAGATTATGAGATTACAGTTATAT
AATGTGCCATACCTTGAACATAATCCATGAGTACTAGCCATGAAGCCAAAAATTAAGCCACACACTGGCAGTATGCTGAC
ACAGTGGCTATATAGCGAATTTCGCATTGTTAAATTGCACTTTACACCCTTGAGGCCTTGACTGGGCTAACACTGGACGC
TGTCTTCCTATTTTTATTTATTACTTAACAGTTGTTGC-AAAAAGGCAGAAACAATGTTAACTGTTGGTTGTTATGTGCC
GGAATTGCAGATGGTGGAGTGGAAATCAAGCAAGCACCTGCAAGTTCTTTATCGAAACCTGATGAACCCTCCCTTCCTCT
TGCAAAGATACCAGGGCCAGAATCAAGCAAAGAGAACAGTGGCGTCATGTGGACGTCATCGCCTGACCGGCTTGAAGATC
ATCGCAGACCATTGCAGTACTCAAACAGTTCTGGCTCTCCCTGTGTTTCAGAGTCAGGATCTGACATTTATATCAAGAGA
GAGGTCATACAGAAGTTGAGACAGCACCTCAGGAAACGTGATGAGATGATCATAGAGATGCAAGCACAGATAGCTGATCT
TAAGAACTCTCTCAGCATCGAGGAGACGCAGACCGCCAATTTGCAGTCCCAGCTGGATGGTGCCAACCGAGATCTGTTCG
AATCTGAGAGGGAGATCCAGCAGCTAAGGAAGATCATCGCAGATCATTGTGTGGCAGAAGCGCTCTCCCGCGACAAGCCC
TTGCAAGCTGGAAACTGGCAACCAGATGCCGCCAATGGGCATGCGAATGGCTACGCTGATAGCAGCATCGATGACCCTGA
GCTGCACTGTATTGGTATCGAGAAGAGGAACGGCGAGGCAGAGAGGGTGGAGATGCTCAAGAGAGAGGTGGGCGAGCTGA
AGGAGGTGATAGAGGGGAAGGACTTCCTGCTCCAGAGCTACAAGGAGCAGAAGGTGGAGCTCTGCTCGAAGATGAGAGAG
CTGCAGGAAAGGCTCTCGGCGCAGGTGCCCAACATCTTGTAGGATCTACTCGACAACCTCACTACGG-----AATTTGCT
AGGGCTAAGGTAGCTAGCAAATTGGTGTTGTCAA-GGATTCACGGGAAAAGATTTCGTCGCACGTGCTAGGGTCTTTGCA
GAATGTTACGTTGATTCGTTTTTCTTTCCCCTCAGTTTTAGTCCTTGGTTGCTCAGTGTTTAAAAGAAGGGCTTATT---
---TTTTTCAGTTGCTAGGGCTAGGTAGGATAC----TGGACCTGGATGAGTGTTGTATAGGTTTTTCGGGTTTGCAGGC
GTGATCGTGTTACATGCTCCCTCTTTTAGCTCGGCGTGGTTTAGGCCAGTGCGGTCTTGAATTTGTGGACGTTTTTTTCC
AGTA----------------------------------------------------------------------------
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-----AAATGGCTTTGTTTCTCTGCGTGTTTCCGATGCCTTTTGTTTCCAAAGGCAGTTCAGTTCACTCCAGAAAATCGA
TTTATTCAGCAGCCAATAACGAATGGGCTTAATGTTTATGGACACCACATCCTGTAACATTCCATTCCTATGT-------
-----ATCCATTGAGATTCCAAACACAAGGCCCAAACCTTTC-TTGCTACAATCTGATTAGACT--TGTAACTAACGAGT
ACCCATGAATTA--GATAACTGCCTGGTGCTTTGCTTCATCACTGAAGAGTTTGTATTCTACAA-----TGTAGTAATGT
TTCCTTCATTCCTGTGACAATCTTAACTATGTTGTATGCTGTTGTCCTGC------------------------------
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-------------------------------------
>SNPs
--------------------------------------------------------------------------------
------------------------S------------S------------------------------------------
--------------------------------------------------------------------------------
-----S--------------------------------------------------------------------------
------------------------------------------------S---------S----S-----S----------
-----S---------------------------------------------S--------S-----------S-------
----------S--------------------------------------------------S-SS---------------
-------------------------------------S-----S------------------------------------
S-------------------------------------------------------------------------------
-------------------S------------------------------------------------------------
----------S--------S-------------------------------S--S-------------------------
-----------------------------------------------------------------------S--------
---------------------S--S-S-----------S--S--------S----------S--SS-------SSS----
--------------------------------------------------------------------------------
-S--------------------------------------------------S---------------------------
-----------S--------------------------------------------------------------------
---------------------------------------------S----------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------SS--------------------
------------------------S--------------------------S----------------------------
------------------------------------SS------------------------------------------
--------------------------------------------------------------------------------
----------------------------S---------S-----------------------------------------
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-------S-----------------------------------------------S------------------------
--------------------------------------------S--------S--------------------------
--------------------------------------------------------------------------------
-------S--S---------------------------------------------------------------------
--------------------S-------------------------------S--------------------S-----S
--------S-------------------S---------------------------------------------------
-------SSSS-SSS-SSS----------S--------SS---S---------------SSS---S---------S-SSS
SSS--------------------S-SSS-S-SSSSSS--S--S---------------S----S------SS--------
------S---S-S-------------------S----------S---S---S----------S------S-S--SSS-SS
SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSS------------------------------------S-------------S--------------------------
--------------------------------------SS-SSSS-SS--------------------------------
SS-----------------------SS-S-----S--------------S--------------SS--------------
----S-S-----S------------------------------S--------------------SSSSS-----------
-----------------------------S---S----------S-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_369
--------------------------------------------------------------------------------
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-----------------------------GTCCCGTCTGGCTGGAAATA-------------------------------
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>reverse_2248
--------------------------------------------------------------------------------
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-------CAGGGAGATCCAGCAGCTAAG----------------------------------------------------
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-------------------------------------
>forward_379
--------------------------------------------------------------------------------
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---------------------------------------GCTGGAAATAGCCGACTGAG---------------------
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>reverse_2296
--------------------------------------------------------------------------------
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-------------------------------------------------------TGAAGCACTCTCCCGCGA-------
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>forward_1212
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------------------------------------------------------------------------CGCTCTCG
GTCAGACTTGGA--------------------------------------------------------------------
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>reverse_2864
--------------------------------------------------------------------------------
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---------------------------------------------------------------ATTTCGGTCTTGAGGCG
TGA-----------------------------------------------------------------------------
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-------------------------------------
