>input_sequence_43763
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------ATGGC
TCCCGCTATTGAAGCAGCAGAGAAGGTCAAGGTGGCAAGCGCACCTGTTAAGGCTCCTGTTCTTAATGAAAGAACACTAT
CATCCATGACCCGGAGACCTGGTTCAGCGCATTCTTGGCATGATCTTGAAATAGGTA-TTTGGCATTTGATCTTGACAAG
ATGTCGATATCATTGTTTCCCTCTTCTGAAAACTTATGTTTTGGACTTCTTTGTGCAGGCCCTGATGCACCAACTATCTT
CAACTGTGTAAGGCCGCGCCCTAATATATTCCTACTGATTTTTCTTTCCTTCTAATTTCGTTGTATAATAATTATCTAAA
ATAAATTTCTGTGTATTTACGCTACAAGTCCATATCAATAGCATAGCCCCTTTCCTTCTGTTAACTTGAAAAGCAAGGGT
TCCACCTCATATAAAATATA------------------TATGTCATTTCAAGCTTCTCAATTTTGTTTAATTAGTTAATA
TCCAACATGCCTAGGAGTTCTGAACGACAAACTAAAAAATAGATGCTATTTTATGCCAGGTCATTGAGATACCTAGGGGC
AGCAAGGTTAAATATGAACTTGACAAGAAAACTGGACTGATAATGGTAAAGCATTGCTGTTCATTTCCCC-TCCTATTTT
GAATCTCTCTTGCCCCATCGTTCTTATGGTTTTCGTTGGCTATATGCACGCGTGCAGGTGGACCGCGTGCTTTATTCATC
AGTGGTGTACCCTCACAACTATGGATTCATTCCCCGCACACTGTGCGATGACAGTGATCCGATGGATGTGCTAGTTATTA
TGCAGGTATGTCTTACTACTTCCCTTTTGTGGTGTACCCTCACCAAATGGGTAGAAGGCCGTTGTACTTCCTACTGTAGA
GTCTGTTGGTTGGTTGTAGAACATTACCAATCTGCATTCGCAAATCTTTGTAA---------------------------
------------------TTTGTTGATACAGGAGCCAGTTGTGCCGGGCTGTTTCCTCCGTGCAAAGGCGATCGGCCTCA
TGCCTATGATTGACCAGGTTTGCTTTCATAGTTTCATCGCTCAGCCCTGCAGTCCAAAGAAGGCAGAGATCCTGATCAGT
ATTTA-TTTGAACAGGGAGAAGCAGATGATAAGATCATTGCAGTGTGCGCTGACGACCCTGAATACAAGCATTTCAATGA
TATCAAGGAGCTCCCACCTCACCGGTTGGCTGAAATCAGACGCTTCTTTGAGGACTGTATCCTTGTTGATCAACTTATAT
TCTCTCACCTTTTCAATGAAATGAAACGCAAAGAGTCCTTTGCGTTTTCTCGAGAAAAAAAAAACTTATATTCAGATATG
AATAGCAAGTATTCCACAAAACAAAAAGTTTGCTTATTTTGGTTTTACTTGCAGAAAAGAGCCCCCTAATTTTTAACCTG
CAGGATACTTCTAGGAAAAATCACCAGCCCTCGCCTCTTTTATGAATTACCGGTGCATGGCTATGTGCAT------TTGT
AGTTTGTTTAGAGCTGAAACATGGATA--------------AATGGACAAGGCAGTGCAAGTTTGTAGTACATGTCTCCC
TCTTAGATCGAATGATTTCTTTAACCGCGACGTCTAGACAAGAAGAATGAGAACAAGGAGGTCGCTGTGAACGACTTTCT
GCCGGCGACTGCTGCTTACGAGGCCATTCAGCATTCCATGTGAGTGTTTCTTTCTTGAATCCCCTCAGCATGGC--TGTC
CTAGATGATCTTGGTGCTGAGCTGACGCCGGTCTTC-TTGGTGTTCTGTTCACAGGGATCTGTATGCTACTTACGTCGTG
GAGGGCCTGCGGAGGTAG--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>chr1B_1_TraesCS1B01G049200
CGTTGGCCGAGCGGGTCGATTCCGGCGGCCGCGCGCGCCTCTGCTCGGCGGTTTCGGCTAGCGAAATGGCCGGATGAATC
TGGCCGGGCAACTGAAATGCGCGGGGTTTTTGGGTACGTGTTAGGCATTCGCCTCCCATGGATGCTGGCGCCATGAAGCC
TGCACCATTAGCCTGGTAGTTGTATTACTGCATCCTCAAGATTCATTCTTAGTGCAGTAGTAGCGTTTTCTGTACACAGA
TTCGGTATGCAGTCTTGTTTATCATTAATGGTTTCTGCCAAGGAAACAACCAAGTCACTAGCCTTGCTTATTAATTAATA
AATAATGGTTTCTAAAACAGCTTCCTAGCCTCACTTATTTAATGGTTGCCAAAAAATCATCAGCCTTGTCCTCCAAAAAT
TTCGCTAGTTCTGCTTGTCCATGGCTTCTAAGTCATTTATCTGGTTGATATAATAAGAAATAGTCTTGACATCAAAAAAA
AAATCACTAGTGCTACCTTGTTAATGATTAAAAATCACTAGTCCTGCTTATTGATGATTTCATCGCTGTACATTCACAAC
ATGTATGTTTGTTCATATATTTAATCATCAATTACAAGATGTTGATGCATTTGCCCATGCCTGCTCTGTAAATAAACTGA
AGAAGGTGCTAGCATTCATCATACAGGGATATACATGAAAAACCATCCATCGATATCAAGTTCCTGGTTTCGTTGGGTTG
CTTGGGTCAATTA-TATTGTTTGGTTGCTGCTGTCAACGTAGTTG----------GACAAGTTGTTTTTTCATGAGAGTG
CCAATTTTGTATTACTGT------------GTTTGCTCATTTGTGCCTATGATCTCCTGACATGGTGTTATCATATCTAG
TCTTTATTCAAAGCTCGACGATCG-CTTTTTCAGTTAGCATTCTTGTATCTTCTATGATGGCATTAACTTAACTTCTGTT
GGGATGGC-----------TTCTGTATTTAGGGTTCTAATAGAAGCAAACATACAATTGTTTCCAGGTTTTTGTGATGGC
TCCCGCTATTGAAGCAGCAGAGAAGGTCAAGGTGGCAAGCGCACCTGTTAAGGCTCCTGTTCTTAATGAAAGAACACTAT
CATCCATGACCCGGAGACCTGGTTCAGCGCATTCTTGGCATGATCTTGAAATAGGTA-TTTGGCATTTGATCTTGACAAG
ATGTCGATATCATTGTTTCCCTCTTCTGAAAACTTATGTTTTGGACTTCTTTGTGCAGGCCCTGATGCACCAACTATCTT
CAACTGTGTAAGGCCGCGCCCTAATATATTCCTACTGATTTTTCTTTCCTTCTAATTTCGTTGTATAATAATTATCTAAA
ATAAATTTCTGTGTATTTACGCTACAAGTCCATATCAATAGCATAGCCCCTTTCCTTCTGTTAACTTGAAAAGCAAGGGT
TCCACCTCATATAAAATATA------------------TATGTCATTTCAAGCTTCTCAATTTTGTTTAATTAGTTAATA
TCCAACATGCCTAGGAGTTCTGAACGACAAACTAAAAAATAGATGCTATTTTATGCCAGGTCATTGAGATACCTAGGGGC
AGCAAGGTTAAATATGAACTTGACAAGAAAACTGGACTGATAATGGTAAAGCATTGCTGTTCATTTCCCC-TCCTATTTT
GAATCTCTCTTGCCCCATCGTTCTTATGGTTTTCGTTGGCTATATGCACGCGTGCAGGTGGACCGCGTGCTTTATTCATC
AGTGGTGTACCCTCACAACTATGGATTCATTCCCCGCACACTGTGCGATGACAGTGATCCGATGGATGTGCTAGTTATTA
TGCAGGTATGTCTTACTACTTCCCTTTTGTGGTGTACCCTCACCAAATGGGTAGAAGGCCGTTGTACTTCCTACTGTAGA
GTCTGTTGGTTGGTTGTAGAACATTACCAATCTGCATTCGCAAATCTTTGTAA---------------------------
------------------TTTGTTGATACAGGAGCCAGTTGTGCCGGGCTGTTTCCTCCGTGCAAAGGCGATCGGCCTCA
TGCCTATGATTGACCAGGTTTGCTTTCATAGTTTCATCGCTCAGCCCTGCAGTCCAAAGAAGGCAGAGATCCTGATCAGT
ATTTA-TTTGAACAGGGAGAAGCAGATGATAAGATCATTGCAGTGTGCGCTGACGACCCTGAATACAAGCATTTCAATGA
TATCAAGGAGCTCCCACCTCACCGGTTGGCTGAAATCAGACGCTTCTTTGAGGACTGTATCCTTGTTGATCAACTTATAT
TCTCTCACCTTTTCAATGAAATGAAACGCAAAGAGTCCTTTGCGTTTTCTCGAGAAAAAAAAAACTTATATTCAGATATG
AATAGCAAGTATTCCACAAAACAAAAAGTTTGCTTATTTTGGTTTTACTTGCAGAAAAGAGCCCCCTAATTTTTAACCTG
CAGGATACTTCTAGGAAAAATCACCAGCCCTCGCCTCTTTTATGAATTACCGGTGCATGGCTATGTGCAT------TTGT
AGTTTGTTTAGAGCTGAAACATGGATA--------------AATGGACAAGGCAGTGCAAGTTTGTAGTACATGTCTCCC
TCTTAGATCGAATGATTTCTTTAACCGCGACGTCTAGACAAGAAGAATGAGAACAAGGAGGTCGCTGTGAACGACTTTCT
GCCGGCGACTGCTGCTTACGAGGCCATTCAGCATTCCATGTGAGTGTTTCTTTCTTGAATCCCCTCAGCATGGC--TGTC
CTAGATGATCTTGGTGCTGAGCTGACGCCGGTCTTC-TTGGTGTTCTGTTCACAGGGATCTGTATGCTACTTACGTCGTG
GAGGGCCTGCGGAGGTAGGCTGCTGCCCGGAGGTTCGGCTCGACGCGCTGCTCCTTGTCGTCGGGGCCGGGACGATGTTG
GCGAAAACCGGAGAATGAGACACTGTCACCTTACGAACTAAGTACTGTTATTTTGTTGGTGTTGGCATATGTACCACTGG
TTCTTATGACCTTGAATGTACTAGTAGTTAGCACAAGAAAGAGTGGCGCAATATTCTTTTGTGGCCTCGGTGCCCCTATG
TTGTTACCTTCA------TGTTGATTCTCTTGACGATTCAAGTCAGGCATAAAAAATTCGTTGTCAATTTCTCACGGTCA
GATAATCAAGTATGTCATGGCTGCTGATTCCTTTACACCACAAAGAATACAGAGATGGTTCCTGATAGCAGAATTTCAAC
CTAAATGACATAAATTTCACCTACAGAAAATAG-TTGGCATATCTGGTACTCCCTTATTTATAAATCAACACACAGAATG
GTCACTTAGTAGTACCCCCTTATTC--------------------------ATTTGCAAAACAAGAACCATGTCTCTCCC
TTAGA---AAATCAACAAACACAATGCCCATTTAGAC--ACTGTTACCTTGCAAAATACTACTCCG----TCCCAAAAAG
CTTGT-----ATTTGTCTAGATTTGGATGTATCTAATACTAAAACGTGTCTACATTCATCCATATCTAAGCAAATGTAAG
GCGAACTTTTTGGGACGGTTGGAGTACGAACTACTATAGATTTGCTAGTGTGACTTGAGCATGCACCAGCGAATCATCTT
GAAATG-TTATTTTGTAGCCTTTTGCCCCTTCAAGTCAGGCATGAAATTTGTGATGTCACGTTTCAAAGATTCAGTCTAT
TGTGACTCCTTTGCAAGAATGCAGAGATGAACACCATAACTAATCAACCAAATCAGAAGCTGTTCCAAATACAAACTTTC
GTAGAATACCTTAAGGAAAACTAGTTGTAAAGTAGAATCCCTTACAGAAAATCAGTTGTAAAGCAATCATGAAACTTGTA
AGCAACGGCAACTATCCCAACACTGC
>chr1D_536
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------GATTTCATCGCTGCACATTCAAAAC
ATGTATGTT-GTTCATACAGTTAATAATTAATTACAGGATGTTGATCCATTTGCCTATGCTTGTTCTGTAAACAAAATAA
AATGGGTACTAAATTTAATCCAAGG-------ACACGAAAACCCATCCATCTCTATTCAGTACCTACTTTTGTCAGGTTG
CTCGGGTCAGTTACTATTGTTTGGTAGTTGCTCTCAACATAGCCATTCATTGTCTGCCAGTTTGTTTATTCTTTTGAGGG
TCCCAGGTTACCACTTTCTTATTTATTATCGTTTGCTCATTTGTGCCTATAATCTC--------GTGTTATCATAGATTG
CCTTTATTCAAAGCTTGACGATTAATTTTTCCAGTTAACATTGTTGTATCTTCTATGATGACATTGACTTCACTTCTGTT
GGACAGCTTTAATTGGAATTTCTGTATTTAGTTTTCTAAAATAAGCAAACATGCAATTGTTTTCAGGTTTTTGTGATGGC
TCCCGCTATTGAGGCAGTGGAGAAGGTCAAGGTGGCAAGCACACCCGTTAAGCCTCCTGTTCTTAATGAAAGAATACTGT
CATCCATGACCCGCAGACCTGGTTCAGCGCATTCATGGCATGATCTTGAGATAGGTATTTGA-CATTTGATCTTCACAAA
ACATCGATTTCATTGCTTCCCTCTTCTGAGAACTTACGTTTTGGACTTCTTTGTGCAGGCCCTGATGCACCAACTATCTT
CAACTGTGTAAGGCCA--CCCTAATATATTCCTACTGATTTCCCTTTCCTTCTAATTTT---GTTGTATAATTATCTGAA
AGAAATTGCTGTATATTTATGCTACAAGTCCATATCAATAGCATGGCCCCTTTACTTCTGTTAACTTGAAAAGCAAGGGT
TCCACCTCATATAAAATATA------------------TATGTCACTTCAAGCTTCTCAATTTTGTTTAATTAGTTAATA
TCCTACATGCTTAGGAGTTCTGAACAACAAACTAAAAAATAGATGCTATTTTATGCCAGGTCATTGAGATACCTAGGGGC
AGCAAGGTTAAATATGAACTTGACAAGAAAACTGGACTGATAATGGTAAAGCACTGCTATTCATTTTCCCCTCCTATTTT
GA-TCTCTCTTGCCCAATCGTTCTTATGGTTTTCGTTGGCTATACGCATGTGTGCAGGTGGACCGTGTGCTTTATTCATC
AGTGGTGTACCCTCACAACTATGGATTCATTCCCCGCACGCTGTGTGATGACAGTGATCCGATGGATGTGCTAGTTATTA
TGCAGGTATGTCTTACTACTTCCCTTTTGTGGTGTACCCTCACCAAAAGGGCAGAAGGTCGTTGTACTTCCTACTGTAGA
ATCTGTTAGTTGGTTGTAGAACATTAACAATCTGCATTCGCAAATCTTTGTAATTTG-----------TTGTTTGGGT--
---TTTAAAATGTTATC-TTTGTTGATACAGGAGCCAGTTGTGCCGGGCTGTTTCCTCCGCGCAAAGGCCATTGGCCTCA
TGCCTATGATTGACCAGGTTTGCTTTCATCCTTC--------AACCCTGCAGTCCAAAGGAGGCAGAGATCCTAATCAGT
ATTTTCTTTGAACAGGGAGAGGCAGATGATAAGATCATTGCAGTGTGCGCTGACGACCCTGAGTACAAGCATTTCAATGA
TATCAAGGAGCTCCCACCTCACCGGTTGGCTGAAATCAGACGCTTCTTTGAGGACTGTATCCTTGTTGATCC--------
---------------------------------------------------------------ACTTATATTCAGATATG
ACTAGCAAGCATTCCACCCAA-AAAATGTCTGCCTATTTTGGTTTTACTTGCAAAAAGAG---CCCTAAGATTGAACCTG
CAGGGTATTTGTAGGAAAATTACTGC-TCCTCGCCTCTTTGATGCAGTACTGCTACATAGCTATGTGCAT------TTGT
AGTTTGTTGATAGCTGAAACATCGATATTATATCATGCATAAACTGTCAAATTAGTGCGAACTTGATAATATCTGCCTCC
TCTTGGATCGAATGATTTCTTTAACCGTGACGTCCAGACAAGAAGAATGAGAACAAGGAAGTTGCTGTGAACGACTTTCT
GCCCGCGACTGCTGCTTACGAGGCCATTCAGCATTCCATGTGAGTGTTTCTTCCTTGAATCC--TCGGCATGGC--TGTC
CTATATGATCTTGGTGCTGAACTGACGCCGTTCTTC-TTGGTGTTCTGTTCACAGGGATCTGTATGCTACTTACGTCGTG
GAGGGCCTGCGGAGGTAGGCTGCTGCCTGGAGGCAA-----------CTGCTCCTTGTCGTCGGA-GCGGGACGATGTTG
GCGAAAACCGGAGAATGAGACACTGTCACCTTACGAACTAAGTACTGTTATTTTGTTGGTGTTGGCATATGTACCACTGG
TT-TAATGACCTTGAAAG---TAGTAGTTAGCACAAGAAAGAGTTGCGAAATATTCTTTTGTGGCCTCAGTGCCCCTATG
TTGTTATTACCTCGATGTTGTTGATTCTCTTGACGATTCAAGTCAGGCATAAGAAATTCATTGTCAATTTCTCATGGTCA
GAAAATCAAATATGTCATGGCTGTTGATTCCTTCACACCATAAAA---ACAGAGATGGTTCTTGATGGCAGAATTTCAAC
CAGAATGACATAAATTTCAGCTACAGAAAATAGATTGGCATATCTAGCACTCCCTTAATTATAAATCAGCACACAGAATG
GTT------------------ATTTAGTAGTACATGGCAGCGGCAAGCCTTATTTGCAAAACAAGAACCATGTCTCTCCG
------------------------------TTTAGCAATACTGTTACCTTGCAAAATACTACTCCCTCCATCCCAAAAAG
CTTGTCTTAGATTTGTCTACATTTGGATGTATGAAACACTAAAAC-TGTCTAGATTCATCCGTATATAGACAAATCTAAG
ACAAACTTTTTGGGACGGATGGAGTACTAAATACTGTAGATTTGTTAGTGTGAGTTGAGCATGCAC-AGCGAATCATCTT
GAAATATTTATTTTGTAGCCTTTTGCCCCTTCAAGTCAGGCATGAAA---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>chr1A_865
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------TCAAAGCTTGGCGATTG-TTTTTTCAGTTAACATTGCTGTATCTTCTATGATGATATTGACTTAACTTCTGTT
GGACAGCTTTAATTGGAATTTAAGTATTTAGTTTTCTAAAATAAGCAAACATACACTTGCTTTCAGGTTTTTGTGATGGC
TCCTGCTATTGAAGCAGCGGAGAAGGTCAAGGTGGCAAGCACACCCATTAAGCCTCCTGTTCTTAATGAAAGAATACTGT
CATCCATGACCCGGAGACCTGGTTCAGCGCATTCATGGCATGATCTTGAGATAGGTA-TTGA-CATTTGATCTTCACAAA
ACATCGGTTTCATTGTTTCCGTCTTCTGAAAACTTATGTTTTGGACTTCTTTGTGCAGGCCCTGATGCACCAACTATCTT
CAACTGTGTAAGGCCG--CCCTAATATATTCCTGTTGATTTTCCTTTCCTTCTAATTTC---GTTTTATAATTATCTAAC
AGAAATTGTTGTATATTTATGCTACAAGTCCATATCAATAGCATAGCCCTTTTCCTTCCCTTAACTTGAAAAGCAAGGGT
TCCACCTCATAAAATAGTATATCATCTTTTAAGCCACCTATGTCATTTCAAGCTTTTCAATTTTGTTTAATTAGTTATTG
TCCTAAATGCTCATGAGTTCTGAACCACAAACTAAAAAATGGATGCTATTTTATGCCAGGTCACTGAGATACCTAGGGGC
AGCAAGGTTAAATATGAACTTGACAAGAAAACTGGACTGATAATGGTAAAGCATTGCTATTCATTTTCCC-TCCTATTTT
GAATCTCTCTTGCCCAATCGTTCTTATGGTTTTCGTTGGCTATATGCATGTGTGCAGGTGGACCGTGTGCTTTATTCATC
AGTGGTGTACCCTCACAACCATGGATTCATTCCCCGCACACTGTGTGATGACAGTGATCCGATGGATGTGCTAGTTATTA
TGCAGGTATATCTTACTACTTCCCTTTCGTGAACACTGGA-----------CAGAAGGTCGTTGTGCTTCCCACTTTATA
ATCTGTTAGTTGGTTGTAGAACATTAGCAATCTGCATTTGCAAATCTTTGTATTTGTCACTTCTACACTTGTTTGGGTCA
GTGTTTAAAATGTTCATTTTTGTTGATACAGGAGCCTGTTGTGCCGGGCTGTTTCCTTCGCGCAAAGGCCATTGGCCTCA
TGCCTATGATTGACCAGGTTTGTTTTCATAATTTCATCTCTTAACCATGCAGTCCAAAGAAGACAGAGATGCTGATCACT
ATTTA-TTTGAACAGGGAGAAGCAGATGATAAGATCATTGCAGTGTGTGCTGATGACCCTGAATACAAGCATTTCAATGA
TATCAAGGAGCTCCCACCTCATCGGTTGGCTGAAATCAGACGCTTCTTTGAGGACTGTATCCTTGTCGATCC--------
---------------------------------------------------------------ACTTATATTCAGATATG
ACTAGCAAGTATTCCACCCAA-AAAAAGTCTGCTTATCTTGGTTTTACTTGTCAAAAGT---CCCCTAGGCTTGAACATG
CAGAATATTTCTAGGAAAAAATACTGGTCCTCGCCTCTTTGATGCACTACTCGTACACAGCTATGTACATTTGTGCTTGT
AGTTTGTTGATAGCTAAAGCATGGATCTTATATCATGCATAAATGGTCAAGGCAATGCAAGTTTGATTATATATGCCAAT
TCTTCGATCAAATGATTTCTTTAACCTGGACATCCAGACAAGAAGAATGAGAACAAGGAGGTTGCTGTGAACGACTTTCT
GCCTGCGACTGCTGCTTATGAGGCCATTCAGCATTCCATGTGAGTGTTTATTTCTTGAATCC--TCAGCATGGCTGTGTC
CTCAATGATCTTGGTACTGAGCTGACGCCGGTCTTCTTTGGTGTTCTGTTCATAGGGATCTGTATGCTACTTACGTCGTG
GAGGGCCTGCGGAGGTAGGCTGCTGCCTGGAGGCTCGGCTCGACGCGCTGCTCCTTGTCGTCGGA-CCGGGGCGATGTTG
ATGAAAACCGGAGAATGAGACACT-TCACCTTACGAACTAAGTACTGTTATTTTGTTGGTGTTGGCATATGTACCACTGG
TT-TTATGACCTTGAATG---TAGTAGTTAGCACAAGAAAGAGTGGCGAAATATTCTTTTGTGGCCTTGGTGCCCCTGTG
TTGTTGTTACCTTGATGTTGTTGATTCTCTTGACGATTCAAGTCAGGCATAAGAAATTCATTGTCAATTTCTCATGGTCA
GAAAATCAAGTATGTCATGGCTGCTGATTCCTTCACACCATAAAA---ACAGAAATGGTTCTTGATGGCAAAATTTCAAC
CAGAATGACATAAATTTCAGCTACAGAAAATAGATTGGCATATCTAGTACTCCATTAATTATAAATCAACACACATAATG
GTC------------------ATTC--------------------------AGTTGCAAAACAAGAACCATGTCTCTCCC
GTACTTATAAATCAACAAACACAATGGCCATTTAGACATACTGTTGCCTTGCAAAATACTAAACCCTCCATCCCAAAAAG
CTTGTCTTACAGTTGTCTAGATTCGGATGTGTCTAACACTAGAACGTGTCTACATTCATCCATATCTAAGCAAATGTAAC
ACAAACTTTTTGGGACAGTTGGAGTACTAACTACTGCAGATTTGTTGGTGTGACTCGAGCATGCACCAGCAAACAATCTT
GAAATG-TTATTTTGTAGCCTCTTGCGCCTTCAAGTCAGGCAT-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------S-------S---
---------S-------S-S-----S--S-------S---------S--------S----S--S--------S---S-S-
-SSS---S---SSS--S---SS-SSSSSSSSS---S-----S---------SS---SS---S---SS---S--SS-----
--S------S---------------S-S----S-----S---SSS-----------S--SS------S---S-SS---S-
S-SSSSS-SSSSSSS-SS--------------------------------S-----SSSSSSSS-----------SS-S-
S--------------S------S--S-----------S----S-----------------S----S--------------
--SSS-SS-----------------------SS------S-S--------------------S-----------------
------------------S---------------------S----S------S---------------------S---S-
----------------------------------S--------------S----------SSS-----------S----S
-SS-----S-----------------------------------------------------------------------
----------------SS------------------------S----------------SSS--S-S-------------
-S-----S----S------S------------------------------------------------------------
--------------------------------------------------------------------------------
---S------S--------------S------------------------------------------------------
----------------------------------------------------------S-------S-------------
---------------S--------------------------------S-S--------------S--------------
---------------------------------------------S----------------------------------
-----------------------------------------------S---S------S---------------------
S------S------------------S-----------------------------------------------------
------------------------------------------------------------S--------S--S-------
------------------------------S-------S--S-S------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------SSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------
-S---------------SS--S-------S-----------------------S---SSSSS-------SS--S------
-------S-------------S--SS-S------------S---S-S---S---S---S---------------------
--------S-S-----------------------------------S------------------SSSSSSSSSS-SS--
----S----------------------S------S---------------------------S-----------------
---S----------------------------------------------------------SS----------------
---S----------------------------------------------------------------------------
---------------------------S-----S------------------------------SS--------------
--------------------------------------------------------------------------------
--S---------------SSS---------------------------S-------------------------------
------SSSS-S----------------------------------------S------S--------------S-----
--S------------------------------S------S---SSSS-------------S----S-------------
-SS----------------S-------------------------S-----------S----------------------
---SSSSSSSSSSSSSSSSSS-----------------------------------------------------------
S--SS---------------------S--------------------------------------S--------------
------------------------------------S-------------------------------------------
S-S------------------------S-------S--------S-----------------------------------
-----------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_68
------------------------------------------------CGGTTTCGGCTAGCGAAATG------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>reverse_1081
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------GCACCTGTTAAGGCTCCTGT--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>forward_80
------------------------------------------------------------GCGAAATGGCCGGATGAATC
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>reverse_2122
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------CAGCCCTGCAGTCCAAAGAA-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>forward_759
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------TTTGGTTGCTGCTGTCAACG-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>reverse_2703
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------CGCTGTGAACGACTTTCT
GC------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>forward_1297
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------CTT
CAACTGTGTAAGGCCGC---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>reverse_2804
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---GATGATCTTGGTGCTGAGCTG--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>forward_2724
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------CTGTGAACGACTTTCT
GCCG----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------
>reverse_3920
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-------------------------------------------------------------------------------A
AGCAACGGCAACTATCCCA-------
