>input_sequence_43754
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------ATGTCTGAACCAGCCACGCAATGCAGGTCGGTCGCTACTCGCCAGCCACCTTGTTGGATTGCT----GGGTGCT
TTCTCGGTTTCCAGGACAGATTCTTTGATTGTTTATCCGCGGATGCCGCCTTGGTCTCGGCGCTGCCTCTGCTCTCGAGC
TGCGTGTCCGTGGC-GTGTTAATGGGGATCCTA-GAGGATCAGTTCCTGAGCCCTTTT-CTCTCATTTGTGTGGATCGCA
GGGGAAATGGCGGCGGCGG---CGAGGGCGGTGCCGGCGGCATGAGGACGGTGGAGTGCCTCAGAGGGAGGCTGCTCGCC
GAGAGGGTGGCGTCCAAGGCGGCCGAGGAGGAAGCCGACCAGCTCGCCGCCAGGGTACA--------------CACATTC
CGTACTCATGTGTCAACCCCTTTAATTCCTACTGTTGGTTCGGTACAGCTTTAATTTTGTTCTTTGATTCGATGACAGTT
GGATGAGCTTGAGAAGAAGCTCTCCGACGAGGTCAAGATCAGGGACAGGGCGGAGCGGAGGCTGAGGAGGGCCATCAAGA
GGCTCGAGTCCGTCAAGATTCTGGATGTGGGGAGCTCCATCGGCTCGCTCTCCTCCAACTCCAACGCCTGCTCCGGCCAA
CAGGCGGCGCCGGAGATGGACGGTCCGGCGAGC---------TCGTTGAGCACCGTCGATCCCGTACGGTCCGGCCCTC-
--------GCGAGGACAAGGGATGGGACGGCGAGAGCGTGAAGGGCTCCTCGGCCGGTTCCTGCACTCAGGCCAACTCCT
CACAGGACGGGAGCTGGTTCTCCGTTGTGTCCGAGCAGTCCGGCTCTGGAGTCTGCAAGGAGGAGGAGAGTCGCACGGAG
GACTCTGACGACGCCGCGAACGAGAAGTGCGGTTCCGGTGACGGCGCTGGTGACGTTGATCGTGATTCAGAGAGGTACGC
GGCGTGCAGGTTTACAAGGAGTGCCTTTTTACTGGTTGTTAAAAAAAGTTGATTAATTAATTGCTTATT-----------
--------------------------------------------------------------------------------
---ATTGCTCTATGGATTATTAGCCTTTTTTGCAT----AGGTGTTTCCAGATTACTGCTACTAGTTTAGTGCAGAG-TT
TTACTTTTCCCCCACAGGAATTAGG---C---TACGTTTCCTCTTTTTTA-----TGTGTTTTCATCATGTTGTTAATGT
TAGGTTTGAAGGGAACAA--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------TATGTACTGCATGCCTCACTTAGTGGAATAATTGTGT
TTAGG----ATAGAAAAGGAGACGGACGGATTGTCGGCGTTGTTCACATCT---GTACTTCAGGCATCC-CTCTGTGTGT
TCCGGACCTTTTTA----GCAGGATAGGAGCGATTCTT------------------------------------------
--GATGTGTCTGTGCGTCTCTTTTTATAGCACCCACTATGTTTTTGCACCATCATACCGATTGTGCTGTGCAGAACTAAC
GGAATTTTTCTGT-GCAGCAGGAGAGAAGAGCAGCCTGGAGCGTCCAGCGGCTCGTCAAAATCCGAAGCGAGCTACCGCG
ACGAGGAGGACGACAGGCTCGCGCTGGTGCTGGTAGACAACCCGCACTACAGCGCAGAGCCGGCCGAGACCAAGAGAAGA
AGGAGGAGGAG------AAAGAAGAGAATGACGGGCTCGCCATGGTCCTGGCGGACCCCCAGCCGAGAGCGACGAGCGTC
GGCGGCAACGACGTGCAGTCGGTCCTGCTGGCGCTGCGGCAGGTCAAGGAGCAGCTGCGCTACACCATTCAGAGGAGGTC
CGAGGGGCTTGTCGCGCACCGAGAGCTATGCGGTCACTGACCGAGCCTGTTCTGTTCTGGTCTCAAAAGCATCTTTTGTT
GTTGTTG---CGATGGTCTCATAA--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>chr4B_1_TraesCS4B01G199400
ACGAACTGCTAAAACCCACGGGCAAAGGTGAGGTGATGGGGCCGACCGACAGCAAGCGCAAGCGGGTTAAATGAGCGAGC
AGCGCTGCCCTTCACGTGGCTTTCTTTCT----GCCCTCCCTCTGTGATGTTATCAGTCTTGCCACATTGCAGATTACGA
GGCCCAAGGCTAAGACCCCACATGTCCCCTCCTGTGGCCATCTCTTTGTTAATCCAGTTTTCTTTTCTTTTATCAGTGGA
ATCAGT----GTTACCATCTCAGTTCCACATGC----GCTTTGCAAGCTCTGTTAGGTAGTCAAGGGCTGAGCTTGTGTG
---TGCTACTACACAATTGACATGTTGAGTTGAGTTGCCCTGGCACTTGGCTGACGCCAACTGTA---TATTATGGTTTC
GACACCGCCTCTCATGTGACTCCTGCATCCAAAGTTTTATTTATGAACGTGAACCATGGGATCATTATGCTTCTCAATTT
GC-AG------TACGTTGAAGAAAACCGTGAAACACTGAAGAATGTACCACT---ACTTCTACAGTAGAGTGAAAGAAGG
TCTCTAGTGGCGCCAGTAACGCGCCTCACGGGTGGCAGTCACGGACAGAGCCGGCCGCCCGTCACTGTGGTCATCTCAAA
TCCTCCGTCAAATCCCCTGCCTCCTAGCAGCCT------CTCTAGCTAGCGTCGGACGCTTCTCACGCCCGCAACAAAGA
GAGAGAGAGAGAGAGAGAGAGGGAGGGAGGGAGGGAGACAGCTCCCGCTTCAAGCCTCCTCCTCCGAATTCAGCAACCGC
CGCACC-CCCCGCCATACCCTGCCGAGCCATCCATCTCAAAAGCAGCAGCGGGCATGCAGATGCAGTGCAGCTAGCAGAA
GCGCCTAAAGCCACCGCCGCCACATGCTGCGTGTTGCCTCTGCCTAGCACAAGCGCAGGCCGGTACGCGCGCACCATTTA
T-----------CTTCCCCTTCCCCTGCCATTGCCGAGCTCGGGTACGCTGCGAGGTCGCTGCGTCGACAAGGGTGGCCG
GGAGGAATGTCTGAACCAGCCACGCAATGCAGGTCGGTCGCTACTCGCCAGCCACCTTGTTGGATTGCT----GGGTGCT
TTCTCGGTTTCCAGGACAGATTCTTTGATTGTTTATCCGCGGATGCCGCCTTGGTCTCGGCGCTGCCTCTGCTCTCGAGC
TGCGTGTCCGTGGC-GTGTTAATGGGGATCCTA-GAGGATCAGTTCCTGAGCCCTTTT-CTCTCATTTGTGTGGATCGCA
GGGGAAATGGCGGCGGCGG---CGAGGGCGGTGCCGGCGGCATGAGGACGGTGGAGTGCCTCAGAGGGAGGCTGCTCGCC
GAGAGGGTGGCGTCCAAGGCGGCCGAGGAGGAAGCCGACCAGCTCGCCGCCAGGGTACA--------------CACATTC
CGTACTCATGTGTCAACCCCTTTAATTCCTACTGTTGGTTCGGTACAGCTTTAATTTTGTTCTTTGATTCGATGACAGTT
GGATGAGCTTGAGAAGAAGCTCTCCGACGAGGTCAAGATCAGGGACAGGGCGGAGCGGAGGCTGAGGAGGGCCATCAAGA
GGCTCGAGTCCGTCAAGATTCTGGATGTGGGGAGCTCCATCGGCTCGCTCTCCTCCAACTCCAACGCCTGCTCCGGCCAA
CAGGCGGCGCCGGAGATGGACGGTCCGGCGAGC---------TCGTTGAGCACCGTCGATCCCGTACGGTCCGGCCCTC-
--------GCGAGGACAAGGGATGGGACGGCGAGAGCGTGAAGGGCTCCTCGGCCGGTTCCTGCACTCAGGCCAACTCCT
CACAGGACGGGAGCTGGTTCTCCGTTGTGTCCGAGCAGTCCGGCTCTGGAGTCTGCAAGGAGGAGGAGAGTCGCACGGAG
GACTCTGACGACGCCGCGAACGAGAAGTGCGGTTCCGGTGACGGCGCTGGTGACGTTGATCGTGATTCAGAGAGGTACGC
GGCGTGCAGGTTTACAAGGAGTGCCTTTTTACTGGTTGTTAAAAAAAGTTGATTAATTAATTGCTTATT-----------
--------------------------------------------------------------------------------
---ATTGCTCTATGGATTATTAGCCTTTTTTGCAT----AGGTGTTTCCAGATTACTGCTACTAGTTTAGTGCAGAG-TT
TTACTTTTCCCCCACAGGAATTAGG---C---TACGTTTCCTCTTTTTTA-----TGTGTTTTCATCATGTTGTTAATGT
TAGGTTTGAAGGGAACAA--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------TATGTACTGCATGCCTCACTTAGTGGAATAATTGTGT
TTAGG----ATAGAAAAGGAGACGGACGGATTGTCGGCGTTGTTCACATCT---GTACTTCAGGCATCC-CTCTGTGTGT
TCCGGACCTTTTTA----GCAGGATAGGAGCGATTCTT------------------------------------------
--GATGTGTCTGTGCGTCTCTTTTTATAGCACCCACTATGTTTTTGCACCATCATACCGATTGTGCTGTGCAGAACTAAC
GGAATTTTTCTGT-GCAGCAGGAGAGAAGAGCAGCCTGGAGCGTCCAGCGGCTCGTCAAAATCCGAAGCGAGCTACCGCG
ACGAGGAGGACGACAGGCTCGCGCTGGTGCTGGTAGACAACCCGCACTACAGCGCAGAGCCGGCCGAGACCAAGAGAAGA
AGGAGGAGGAG------AAAGAAGAGAATGACGGGCTCGCCATGGTCCTGGCGGACCCCCAGCCGAGAGCGACGAGCGTC
GGCGGCAACGACGTGCAGTCGGTCCTGCTGGCGCTGCGGCAGGTCAAGGAGCAGCTGCGCTACACCATTCAGAGGAGGTC
CGAGGGGCTTGTCGCGCACCGAGAGCTATGCGGTCACTGACCGAGCCTGTTCTGTTCTGGTCTCAAAAGCATCTTTTGTT
GTTGTTG---CGATGGTCTCATAATTATAAGCATCCCGAGAAGCGGAAGCTCAAGTGTGTTGCACTTG------CACTTG
CAGTGCTGTATTTATCTACAGCGTTATGAGTATATCTATGCTGGAATAA-GCTTTACTGGTGTGAGACGTTGTAGTGGTT
GTATATATATTTATATGAAAAGTGAATCCCCTGTGTTGTTTATTAGTGTTCCAAAGCAAAGGGATGGCTTTTTTTTTTTA
GAAACAGCAAAGGGATGGCTAGTACACCCTTGCTCACAAATATCAAATATAATACTCCCTTCGTTCCTAAATATTTGTCT
TTCTAGAGATTTCAACAAGTGACTATATATAAAGTAAAATGAGTAAATCTACATTTTAAAATATGTCTACATACATTTGT
ATATTGTAGTTCATTTGAATGTCTAGAAAGACAAATATTTAGGAACGGAGGAAGTACGTTCTAGTAAAGAAGAATCTGAA
TCTAGATACTTTTTAGTGTATTTGTTCACTTATAGTCCGCACGTAGCCCATATTAAAATATATGCAAAACATCAGCCATT
GAAGTGTCGAGCAGCCGAGAGGGTCGCCCACAACGCATCCACGATGTTCGCGCCTATTTAATGCCGAAGATGCGTGACTG
GACGAAACGGGATGGATATCTATCATGCCCATTCAATGGCCCGTCCGTCCGTATGCCGCCGTTAGCAGGCTCGTCAGTCT
AGAAACCCACTCCGACATCCCGCATTGATGCGTGGCCTCACCGGAATCCGCTAGTTAAAGGTAACCACTCCCGGCTATCT
CCACAGGACAACACATCCGCTCCACATACCCTTCCTTTCCTTCACATCCGCCATGACCGCCAGCGAGAAAGCGTCGTGGG
ACAGTCTGTCGCAGGAGATGAAGCACGCAGTGACCGCCCTTGCCACCGCCTGGCGTAGCCGCCGTGCTAGGCGGATCGAG
GGCAGCTCGCCCGAGGTCTTCGACGACGAGGACGATACCACGATGGAGACGGGCTCCGATGACTCCGCACT
>chr4A_18
ACGCGGC-----------------AAGGTGAGGTGATGGGGCCGAGCGACAGCAAGCGCAAGCGGGTTGAATGAGCGAGC
AGCGCTGCCCTTCACGTGGCTTTCTTTCTGCCTGCCCTCCCTCTGTTATGTTATCAGTCTTGCCACATTGCAGATTACGA
GGCCCGAGGCCAAGACCCCACATGTCCCCTCCTGTGGCCATCTCTTTGTTAATCCAGTTTTCTTTTCTTTTATCAGTGGA
ATCAGT----GTTACAATCTCAGTCCCACATGCACC----TTGCAATCTCCGTTAGCTAGTCAAGGGCTGAGCTTGT---
-------------------------TGAGTTGAGTTGCCATGGCACTTGGCTGACGCCAACTGTATAGTATTATGGTTTC
GACACCGCCTCTCATGTGACTCCTGTATTCAGAGTTTTAGTTATGAAGGTGAACCATGGGATCATTATCCTTCTCAGTTT
GC-AATACTCCTACGTTGGAGAAAACTGTGAAATGCTGAAGAATGTACTACTACCACTACTACAGTAGAGTGAAAGAAGG
CCTCTGGTGACGCCAGTAACGCGCCTCACGGGTGGCAGTCACGGACAGAGCCGGCCGCCCGTCACTGTGGTCATCTCAAA
TCCTCCGTCAAATCCC-TGCCTCCTACCATCCTCTCGACCTC------------GACGCTTCTCACGCCCGCAACAATCG
T----------------AGAGAGAGTGGGAGAGGGAGACACCTTCCGCTTCAAGCCTCCTCC---GAATTCAGCAACCGC
CGCACCACCCCGCCATACCCTGCCGAGCCATTCACCTCAAAAGCAGCAGCGTGCATGCAGACGCAGTGCAGCTAGCAGAA
GCGCCTAAAGCCACCGCCGC----------GTGCTGCCGCCATCTAGCGGAAGCGCAGGCCGACACACGGACGCACACCT
CTTCTCTCCCCCCTTCCCCTTCCCCTGCCATTGCCGAGCTCGGATACGCTGCGAGGTCGCGGCGTCGACAGGGGTGGCCG
GGAGGAATGTCTGAACCGGCCACGCAATGCAGGTCGGTCGCTACTCGCCAGCCACCTTCTTGGATTGCTAGCTGGGTGCT
TTCTCGGTTTCTAGGACAGATTCTTTGATTGTTTATCCGCGGATGCCGCCTTGGTCTCGGCGCTGTCTCTGCTCTCGAGC
TGCGTGTAGATGGGGGTCTTAATGGGGATCCTAGGAGGATCAGTTCCTGAACCCTTTT-CTCTCATTTGTGTGGATCGCA
GGGGAAATGGGGGCGGCGG---CGAGGGCGGCGCCGGCGGTATGAGGACGGTGGAGTGCCTCAGAGGGAGGCTGCTCGCC
GAGAGGGTGGCGTCCAAGGCGGCCAAGGAGGAAGCCGACCAGCTCGCCGCCAGGGTACCCCTTCTCCTCTGTCCACATTC
CGTACCCATGCGTCAACCCCTTTAATTCACACTGTTGGTTCGGTACAGCTATAATTTTGTTCTGTGATTCGGTGACAGTT
GGACGAGCTTGAGAAGCGGCTCTCCGACGAGGTCAAGATCAGGGACAGGGCGGAGCGGAGGCTGAGGAGGGCCATCAAGA
GGCTCGAGTCCCTCAAGATTCTGGATGTGGGGAGCTCCATCGGCTCGCTCTCCTCCAACTCCAACGCCTGCTCCGGCCAA
CAGGCGGCGCCGGAGACAGAGGAGAGCAACGGTCCTGCAGTATCGCTGAGCACCGTCGATTCGGTGCTGTCAGACCCTCG
CGCCGGCGGCGAGGACAAGGGATGGGACGGCGAGAGCGTCAAGGGCTCCTCGGCCGGTTCCTGCACTCAGGCCAACTCCT
CCCAGGACGGGAGCTGGTTCTCCGTCGTGTCCGAGCAGTCCGGCTCTGGCGCCTGCA---AGGAGGAGAGCCGCACGGAG
GACTCTGACGACGCCG------AGAAGTGCGGTTCCGGTGACGCCGCTGGTGACGTCGATCGTGATTCAGTGAGGTACGC
GGCGTGCAGGTTTACAATGAGTGCCATTTTACTGGTTGTTAAAAAAAGTTAAA---------------------------
-------------------------------------------------------------------AACAGTTGATTGA
TTATTTGCTATAGGGATAATTAGCCTTTTCTCC-----TAGGAGTTTCCAGATTACTCCTAAG---TTTGTGCAGAG-TT
TTACCTTTCTCCGACAGGAATTAGG---CTAGTACGTTTCCTCTTTTTTCACATGTGTGTTTTCATCATGTTTTTAATGT
TAGGCTGGTTGTAATGGGGAGTATCATATACTAATATACTAGTATTATGCATATGATACTGGTGTATGATACTATCTTCC
TAATGCATAGTATCATATATTAGTATCGTGTACTACTTTATTTATTGTTATGCATGACACAAAGTAGCATAACATTTATT
ATGATACGGTATCATAATATGATATTGCATCCTCTTTTTCTTCATTTAATGCTATGACACCTCATCAAAATTGCTTAATT
GGTATGCATGATACTAGCTATGATATTGGTATGGAGGGAATAGTATGCACTGCATGCCTATGTCAGTGGAATAATTGCGT
TTATATAGTACAGAAAAGGAGACAGACGTATTGTCGGCGTTGTGCTCATCTGTAGTACTTCAGCTTCCCTTTTTTTGTGT
TCCGGACCTTTTTAATTACCAGGATAGGAAGCCGTTGTGTAGTTTGTTACGCCTCTCCATTGATTCTTACTCCACTAGAG
TAGATGCGTCTGTGCATCTCTTTTTATAGCACCCACTATGTTTCTGCACCATCATACCGATTGTGCTGTGCATAACTAAC
GGAATTTTTCACT-GCAGGAGGAGAGAAGAGCAGCCTGGAGCGTCCAGCGGCTCGTCGAAATCCGAAGCGAGCTACCGCG
ACGAGGAGGACGACAGGCTCGCGCTGGTGCTGGTGGACAACCCGCACTACAGCGCAGAGCCGGCCGAGACCAAGGAGA--
------AGGAG------AAAGAAGAGAAGGACGGGCTCGCCATGGTCCTGGCGGACCCCCAGCCGAGAGCGACGAGCGTC
GGCGGCAACGACGTGCAGTCGGTCCTGCTGGCGCTGCGGCAGGTCAAGGAGCAGCTGCGCTACACCATCCAGAGGAGGTC
GGAGGGGCTCGTCGCGCACCGAGAGCTATGCGGCCACTGACCGAGCCTGTTCTGTTCTGGTCTCAAAGGCATCTTTTGTT
GTTGTTGTTGCGATGCTCTCAA------AAGCATCCCGAGAAACGGAAGCTCAAGTGTGTTGCACTTGCGCTTACACTTG
CACTGGTGTATTTATCTACAGCGTTGGGAGTATATGT----TGGAATAAGGCTTTACTCGTGTGACACGTTGTAGTGGTT
GTATATAT--TTATATGAAAAGTGGATTCCATGTGTTGTTTACTAGTGTTCGAAAGCAAAGGGATGACT-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>chr4D_28
---------------------------GTGAGGTGATGGGGCCGAGCAACAGCAAGCGCAAGCGGGTTGAATGAGCGAGC
AGCGCTGCCCTTCACGTGGCTTTCTTT----CTGCCCTCCCTCTGTTATGTTATCAGTCTTGCCACATTGCAGATTACGA
GGCCCCAGGCCAAGACCCCACATGTCCCCTCCTGTGGCCATCTCTTTGTTAATCCAGTTTTCTTTTCTTTTATCAGTGGA
ATCAGTGAGTGTTACCATCTCAGTCCCACATGCATGCGCTTTGCAAGCTCCGTTAGCTAGTCAAGGGCTGAGCTTGTGTG
TGCTGCCACTATACAATTGACTTGTTGAGTCGAGTTGCCATGGCACTTGGCTGACGCCAACTGTATAGTATTATGGTTTC
GACACCGCCTCCCATGTGACTCCTGCATTCGGAGTTCTATTTATGAACGTGAACCATGGGATCATTATGCTTCTCGATTT
GCAAATTCTCCTACGTTGGAGAAAACTGTGAAAAGAATGTA----TACTACT---ACTACTACAGTAGAGTGAAAGAGGG
CCTCTGGTGACGCCAGTAACGCGCCTCACGGGTGGCAGTCACGGACAGAGCCGGCCGGCCGTCACTGTGGTCATCTCAAA
TCCTCCGTCAAATCCCCTGCCTCCTACTAGCCT------CTC------------GACGCTTCTCACGCCAGCAACAGACG
T----------------ATAGAGAG----GGAGGGAGACACCTTCCGCTTCAAGCCTCCTCCTCCGAATTCAGCAACCGC
CGCTCCACCCCGCCATACCCTGCCGAGCCATTCACCTCAAAAGCACCGGCGTGCATGCAGATTCAGTGCAGCTAGCAGAA
GCGCCTAAAGCCGCCGCCGCCACATGCTGCTTGTTGCCGCTATCTAGCGGG----------------CGGACGCACACCT
CTTCTC--------TCCCCTTCCCCTGCCATTGCCGAGCTCGGGTACGCTGCGAGATCGTGGCGTCCACAAGGGTGGCCG
GGAGGAATGTCTGAACCAGCCACGCAATGCAGGTCGGTCGCTACTCGCCAGCCACCTTCTTGGATTGCT----CGATGCT
TGCTCGGTTTCCAGGACAGATTCTTTGATTGTTTATCCGCGGATGCCGCCTTGGTCTCGGCGCTGTCTCTGCTCTCGAGC
TGCGTGTTGATGGC-GTGTTAATGGGGATCCTAGGAGGATCAGTTCCTGAGCCCTTTTTCTCTCATTTGTGTGGATCGCA
GGGGAAATGGCGGCGGCGGCGGCGAGGGCGGTGCCGGCGGCATGAGGACGGTGGAGTGCCTCAGAGGGAGGCTGCTCGCC
GAGAGGGTGGCGTCCAAGGCGGCCAAGGAGGAGGCCGACCAGCTCGCCGCCAGGGTACCACTTCTCCTCTATCCACATTC
CATACCTATACGTCAACCCCTTTTATTGCTACTGTTGGTTCGGTATAGCTTTAATTTTGTTCTGTGATTCGGTGACAGTT
GGACGAGCTTGAGAAGCGGCTCTCCAACGAGGTCAAGATCAGGGACAGGGCGGAGCGGAGGCTGAGGAGGGCCATCAGGA
GGCTCGAGTCCCTCAAGATTCTGGATGTGGGGAGCTCCATCGGCTCGCTCTCCTCCAACTCCAACGCCTGCTCCGGCCAA
CAGGCGGCGCCGGAGATGGACGGTCCGGCGAGC---------TCGCTGAGCACCGTCGATTCCGTGCGGTCCGGCCCTC-
--------GCGAGGACAAGGGATGGGACGGCGAGAGCGTGAAGGGCTCCTCGGCCGGTTCCTGCACTCAGGCCAACTCCT
CCCAGGACGGGAGCTGGTTCTCCGTCGTGTCCGAGCAGTCCGGCTCTGGAGTCTGCAAGGAGGAGGAGAGTCGCGCGGAG
GACTCTGACGACGCCG------AGAAGTGCGGTTCCGGTGACAGTGCCGGTGACGTTGATCGTGATTCAGAGAGGTACGC
GGCGTGCAGGTTAACAATGAGTGCCTTTTTACTGGTTAGTACTTCCTCCGTCCCAAAATAAGTGTATCGACTCTAGTACA
AAGTTATACTAGTACTAAGTTTGAAACACTTATTTTGGGATGGAGGAAGTATTAATTAAGAGTTGATAACAGTTGATTGG
TTCATTGCTCTATGGATTATTAGGCTGTTTTGCATGCATAGGCGTTTCCAGATTACTCCTG-G---TTTATGCAGAGTTT
TTACTTTTCTCCGACAGGAATTAGGGGGC---TACGTTTCCTCTTTTTTTACATGTGTG-TTTCATCATGTTGTTAATGT
TAGGTTTGAAGGGAACAA--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------TATGTACTGCATGCCTCACTTAGCGGAATAATTGTGT
TTAGG----ACAGAAAAGGAGACGGACGTATTGTCGGCGTCGTGCACATCT---GTACTTCAGCATCCCTCTTTGTGTGT
TCCGCACCTTTTTA----CCAGGATAGGAAGCCGTTGCGTAATTTGTTATGCCGCTCCATTGATTCTTAC--------AG
TAGATGCGTCTGTGCATCTCTTTTTATAGCACCCACTATGTTTTCGCGCCATCATACCGATTGTGCTGTGCCAAACTAAC
GGAATTTCTCTGCGGCAGCAGGAGAGAAGAGCAGCCTGGAGCGTCCAGCGGCTCGTCAAAATCCGAAGCGAGCTACCGCG
ACGAGGACGACGACAGGCTCGCGCTGGTGCTGGTAGACAACCCGCACTACAGCGCAGAGCCGGCCGAGACCAAGGAGA--
------AGGAGGATGAGAAAGAAGGGAACGACGAGCTCGCCGTGGTCCTGGCGGGCCCCCAGCCGAGAGCGACGAGC---
---------GACGTGCAGTCGGTCCTGCTGGCGCTGCGGCAGGTCAAGGAGCAGCTGCGCTACACCATCCAGAGGAGGTC
GGAGGGGCTTGTCGCGCACCGAGAGCTATACGGCCACTGACCGAGCCTGTTCTGT-----TCTCAAAAGCATCTTTTGTT
GTTGTTG---CGATGGTCTCAA------AAGCATCCCGGGAAGCGGAAGCTCAAGTGTGTTGCACTTGCACTTTCACTTG
CACTGGTGTATTTATCTACAACGTTGGGAGTATA--TATGCTGGAATAAGGTTTTACTCTTGTGAGACGTTGTAGTGGTT
GCATATAT--TTATATGAAAAGTGAATTCCCTGTGTTGTTT---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>SNPs
---SSSSSSSSSSSSSSSSSSSSS---------------------S----------------------S-----------
----------------------------------------------S---------------------------------
-----S----S---------------------------------------------------------------------
------------------------S-------------------------S-----S-----------------------
------S----S---------S-----------------S----------------------------------------
----------------------------S--S------------------------------------------------
----S-------------S-------S------SS-------------S---------S---------------------
S----S---S----------------------------------------------------------------------
--------------------------S---------------SSSSSSSSSSSS------------------------SS
SSSSSSSSSSSSSSSSS----S---S-S------------S--S------------------------------------
-------------------------------S--S----------------S----------------------------
--------------------------------------S--SS-----SS------------SS--S--SS-S-SSSSSS
S-----------------------------------------------------------S-------------------
----------------------------------------------------------S---------------------
-----------------------------------------------------------------S--------------
-------SSS----------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------S---------------------------------S---------------------
-----S----S----------------------------------------------------S-------S--------
---S------------SS--------------------------------------------------------------
-----------S--------------------------------------------------------------------
---------------------------------------------S--------------S----S--------------
--------------------------------------------------------------------------------
-S-----------------------S------------------------------------------------------
----------------SSSSSS----------------------------------------------------------
-----------------S--------------------------------S-SS--SSS-SSSS-SSSS-----------
--------------------------------------------------------------------------------
------------------------------------------S--------------S---SSSSS--S-----------
---------S--S------------------------------------S------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------S-----------------S--------------S-------------------SSSS-----S-------
------------------S----------SSSSS-SS-------------------------------------------
------S--------S--------------------------------------------------------S-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------SSS-SS
SSSSSS----------------------S---------------------------------------------------
--------------------------------------------------------------------S-----------
S--------------------------------S----------------------------------------------
---------------------SSSSSSS----------------------------------------------------
--S--S-------------------SS--------S----------------------S---------------------
--------SS-----------------S--------------S--------S--------------S--SSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_127
--------------------------------------------------------------------------------
---------------------------CTTTCTGCCCTCCCTCTGTG---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_1209
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------CGTGGCGTGTTAATGGGGAT----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>forward_684
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------GCCTCCTAGCAGCCTCTCTA------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>reverse_2705
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------CATCCCTCTGTGTGTT
CCGG----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>forward_1612
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------CATCAAGA
GGCTCGAGTCCG--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------------------------------------------------------
>reverse_4059
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------------------------------------------AGGTAACCACTCCCGGCTAT--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
