>input_sequence_43714
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-----------------------------ATGAGCGGCGCGACGGGCACCGCCGACTTCTTCTACCGGGAGGCGCTGCGC
CTCGGCTACGTCGCCCGCTCCGCCTTCAAGGTCAGCACCGCCTCGCTCCTCCGGCCCCGCTCTCCCTCCCCGCGCTCCGC
CTTGGACCAATCTCTCACGCGTCGCGCTTCTATTCCCCGCTGCTGCAGCTGATCCAGATACAGAAGCAGCACAAGCTCAT
CGCCCCGGGCGCCGCTGTGCTCGACCTCGGGTGCGCCCCCGGCGCGTGGCTCCAGGTGGCCTGCCAGAACCTGGGCCCGC
TCGAGAAGGGCGGCCTGGTCGTCGGCGTCGATGTCAAGGTTCGCCAATCTGCTGATGCTGTGATTGATGGGCGGGGTGTC
GGGTCTGATTTTGGTGCTCGGTTGTTGCAGAGCAGAAGGTGAAGGTCCCCTCGGCGCACTGCGACTCGCGGGTCAGGACG
GTCTGCACCGATGTGATGGCTCTGATGAAGCAGCAAGCCCGAGCCATGTCGCCGCAGGTTCGATAATAGACTGC--TTTT
TTTAATCTACTCGATGGAATGGAATTCGGCTGGATGTGTATTTTGTGTAGATTAGTGGAATTATGTA----CTGATTAAA
TTTGTGTTATTCTGAGTTTGAAATGTGGCTTGATTGGTTCAAATTCATGACATCTTTGCACTATAAATCCATATATTGGG
ACTATTTTCACAGAAGAAATATAGTCCCGAAGAGTTCTCCCAAAATGGTATCGGGGTTTATTGGCTGACAGCCTGACAGT
GCTTGTTAGAAAAGAACTGTTAAGTAAACCAAATTTAGTGCCATGAGTTGTTAAAATATAACCAAATAATTGTAGTTTAT
CCATCAGCCATCATATATGTTGCATAACAGGTTTTTTTTTGAAAGAAAATGTTGCATAACAGATGGCAAAACACATACCT
ACAAGGTCGAACAATATTTACCAGAGAATGAATCATCAGTTGGAGATATGAGAATGTAGCTGCATATGATGCTGCCTATT
ATGAAGGGCCAACATGTATTAATTAAACGGCAGTTTCTAGCCTTCTGTCAAAATCACAATATTTAGTTGATTGCTAAAAC
TTTTGAGACTGGTCTGTTTTATTTGTCATCAAATATTTGGCCGAACTATCTGTCGTGTCCACCCCTTAAAACTATGAAGC
TTCACTAATCTCAACATTGAAATCACCAGTGCCTGATTTCATGGTGGATGGTTAGAAATACCAGATCAAGGACTGTCAGC
TATATTTGTGCTGTTGATCTTGATAGTGGTTGCTCTGTTCATTTGTTGATTAATTGATGTTACTCTGTTGTACAGGAACG
AGGATTTTCTGTGATATTATCCGACATGTGTCCGGTAGTTTCAGGGATCACAACCAGAGATGAAGCTATATCTTGTGAGC
TGGGCATGCGTGCGCTCTCGTTGGCAGTTGGTAAGATAAAGTTCAAAGAATCGGCTGACTATCGTGAGACTATGGAGAGG
TTTCAGAGCTCCACGGGCCCAGATCCTGATGAGGACGGTGTTCTTAGACGTGGAGGCAGCCTAGTAATCAAGTTTCTTGA
GAACGAGGATATACCAGGTAGATCTTACAAGTAGATTTTGCTTTACTATTGCTTGCAGTTGATATCATAGCAACATGAAT
GATTGTCTATTGCCCTGCTGCAGGGTTTAACAAATTTTGCAAAGAGAAGTTTAAAAAAGTATCTCTCCTGAGGCCTAAGG
CGACGAGGTCTAGTTCGAGGGAGATCTACATGATCTGTGAAGGTTTGCGGTAG---------------------------
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>chr5A_1_TraesCS5A01G482000
GTTGTGAAATATGTTTGCGATGCATTTTTCTTCACATGTGGCCATTTACTTTAGTGGTAAGCAGCGCTACGGAGCGGAGT
GACGTCCCGTGCTCGAATGCTGCGGCATCTCTTTTGATTTTTCGATTTTTACTACTATTAACTACTGGCGGTGTGTCTTA
GTGGGCTGGCCGAGCCACATGGCTCCTGTGTGCGTCGCTCTCCGTATTCACCGCAGAATGCGGCGAGACCTCCTATTGAA
CGCCCGCGTGCGTCGAACGGTAGAGCTTTCGCTGAAAGCGCGCGCAAACGGGCCGGCCCATTGGCAGCGTCGAACCTAGA
ATTCAGCAAAAACAAAACATGCCGCGCGAAGTAGAACTCC----------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------CGACCTCTGGTTTCA
GAAGACACTTGGTAACCACTCGAACTTGTATGATAGAATGCTAAAATGCAGCACTAAACTTTTAAGTACCTATCTACAGT
AGCATATCCGTCTTTTTTCAAAAAAAA--AACTAACATTCATGGAAAAACTGTGAACAAAATTTA-TTAAAAAATAC---
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-------------------------------------------------------------------------GAAAAAT
ATTTT-AAAATGTGAACAAATTTT-AAATTCAAAGAAAAAT---------------------------------------
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-------------------------------------------------------------------------------A
AAAAACCGGGACAAAATAATTGAAAACTGGCCAAAAGAGTGAAAAAAACTGGAAGC-AAAAAACCATAGAAG-AAAAAAA
CCCGCAAGAAACAAGGAAACAGTAGCGAACCAGATCCGTACGTGGGCTGGCCCAAGTGGGGACTTGCTTCAGCGAAGGCT
CGTCCTCTTGACGCCTGCGGGCGTCAAATAGGATCTGCCGAATGCGGCGCATATGAGGTCCCGTTTTCTAGGGCATCTGC
AGCTCATCTGGTTTGGCATGTCAGCCCAAACCAGGCCCGTGAGACATGCTCATGTTAGCAGCCCATCCATGCGAACCAC-
AGACAGCAAGGCCCGCCCGCTCCCGCGAAAACGGCCTAAAACCCTAGCAAACCCGCGTTCACGGCCGTCCGTTCTCCGTT
CGCCGCCGCGCCGCAAT--CGTCGGGAACATGAGCGGCGCGACGGGCACCGCCGACTTCTTCTACCGGGAGGCGCTGCGC
CTCGGCTACGTCGCCCGCTCCGCCTTCAAGGTCAGCACCGCCTCGCTCCTCCGGCCCCGCTCTCCCTCCCCGCGCTCCGC
CTTGGACCAATCTCTCACGCGTCGCGCTTCTATTCCCCGCTGCTGCAGCTGATCCAGATACAGAAGCAGCACAAGCTCAT
CGCCCCGGGCGCCGCTGTGCTCGACCTCGGGTGCGCCCCCGGCGCGTGGCTCCAGGTGGCCTGCCAGAACCTGGGCCCGC
TCGAGAAGGGCGGCCTGGTCGTCGGCGTCGATGTCAAGGTTCGCCAATCTGCTGATGCTGTGATTGATGGGCGGGGTGTC
GGGTCTGATTTTGGTGCTCGGTTGTTGCAGAGCAGAAGGTGAAGGTCCCCTCGGCGCACTGCGACTCGCGGGTCAGGACG
GTCTGCACCGATGTGATGGCTCTGATGAAGCAGCAAGCCCGAGCCATGTCGCCGCAGGTTCGATAATAGACTGC--TTTT
TTTAATCTACTCGATGGAATGGAATTCGGCTGGATGTGTATTTTGTGTAGATTAGTGGAATTATGTA----CTGATTAAA
TTTGTGTTATTCTGAGTTTGAAATGTGGCTTGATTGGTTCAAATTCATGACATCTTTGCACTATAAATCCATATATTGGG
ACTATTTTCACAGAAGAAATATAGTCCCGAAGAGTTCTCCCAAAATGGTATCGGGGTTTATTGGCTGACAGCCTGACAGT
GCTTGTTAGAAAAGAACTGTTAAGTAAACCAAATTTAGTGCCATGAGTTGTTAAAATATAACCAAATAATTGTAGTTTAT
CCATCAGCCATCATATATGTTGCATAACAGGTTTTTTTTTGAAAGAAAATGTTGCATAACAGATGGCAAAACACATACCT
ACAAGGTCGAACAATATTTACCAGAGAATGAATCATCAGTTGGAGATATGAGAATGTAGCTGCATATGATGCTGCCTATT
ATGAAGGGCCAACATGTATTAATTAAACGGCAGTTTCTAGCCTTCTGTCAAAATCACAATATTTAGTTGATTGCTAAAAC
TTTTGAGACTGGTCTGTTTTATTTGTCATCAAATATTTGGCCGAACTATCTGTCGTGTCCACCCCTTAAAACTATGAAGC
TTCACTAATCTCAACATTGAAATCACCAGTGCCTGATTTCATGGTGGATGGTTAGAAATACCAGATCAAGGACTGTCAGC
TATATTTGTGCTGTTGATCTTGATAGTGGTTGCTCTGTTCATTTGTTGATTAATTGATGTTACTCTGTTGTACAGGAACG
AGGATTTTCTGTGATATTATCCGACATGTGTCCGGTAGTTTCAGGGATCACAACCAGAGATGAAGCTATATCTTGTGAGC
TGGGCATGCGTGCGCTCTCGTTGGCAGTTGGTAAGATAAAGTTCAAAGAATCGGCTGACTATCGTGAGACTATGGAGAGG
TTTCAGAGCTCCACGGGCCCAGATCCTGATGAGGACGGTGTTCTTAGACGTGGAGGCAGCCTAGTAATCAAGTTTCTTGA
GAACGAGGATATACCAGGTAGATCTTACAAGTAGATTTTGCTTTACTATTGCTTGCAGTTGATATCATAGCAACATGAAT
GATTGTCTATTGCCCTGCTGCAGGGTTTAACAAATTTTGCAAAGAGAAGTTTAAAAAAGTATCTCTCCTGAGGCCTAAGG
CGACGAGGTCTAGTTCGAGGGAGATCTACATGATCTGTGAAGGTTTGCGGTAGAAGATTGGCCACCACTCACCTCCCATG
AGATCCTGCAAGCTTGTGCTGAGCAGAGTGGCTGGACCGAGAACTCTACAAATTTGCCGTTGAGCTCTAGGCGTGTAGGC
CTGAGACGATGCTAACTTCATCGGCAATTCATGATTATTGAGTTGAGGAAACT-CGATGATATCTCTCCTGGAGGTGATT
TGGTTTGGTGCCTTTGTTAAAGAACAGCTGTATTGGCTTTGCCTTCGTGCTTTTAGAAGAAAAAAGGTTGTACTTGTTTT
GATAACCGTGTTGATTCGTCTCTAACCTGTGTGCTGTATCATCTGTCTTTCTAGGCATCGTGTTTTAATATTGTTTCTTA
GCGAATTTGCTACAGTACATATTTAGGGACTCTTCGGATTACCTCCGCTCCACAGCTCCCACTCCCGGAGCGGGTGGAGT
TACAGTGGAAAAATGTGGAGCGCCTGTTTCCTAGCTCCACAGCTCCTGGTATTTCGCGGAGCAAGTGGGATTCTGAACAG
GGCCTTAGATAAAACATTCT-GGTTGT-------------------------------------------------TCTG
AAATTTCTCTTGAGCGCGTTTGGAAATCTTGCTTAGAAATGACTTGGTGGTGCCCCCTTCCGGTTGCTTGAAGACTGTTT
TTTTTAAACACGGTACAATAGAAGTTGATCGCATACACGAGCATATACTCACCCATATGAATGCATGCATGCACACCCTA
CCTCTATGAGCACTTCCGAGAGACGGAGTTGGCATAGCATCTTGAG----------------------------------
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-----------------ATAATAATAACAAAATCAAACTGGCTAAGGCAGCAATTTTTTTCCTAATTTTGAAATTA--TT
CACTTGCAATGAAAATTTACCAGGAGACAACGCCTGTAATTGGGGATCCTATTGGGTAAACTTCCTTGTGCCCCG-TTTT
TCTGCCGCATTTACCGGGACGTTTCACGAAACTGGGCCGATCGCCCTCTCCTCACCGTGTTGTGCCTTTTCTTCCTCTAA
AAAGAAATGCCTCTCATCTCTCTAGGGGACCGGAACAG
>chr5D_1
GTTGCGAAATATGTTTGCGATGCCTTTTTCTTCACATGTGGCCGTTTACTTTAGTGGTAAGCAGCGCTGCGGAGCAGAGC
GATGTCCCGTGCTCGAATGCTGTGGCATCTCTTTTGATTTTTCGATTTTTACTGCGGTTAACTATTGGCGGTGTGTCTTA
GTGGGCTGGCCGAGCCACACGGCTCCTGTGTGCGTCGCTCTCCGTATTCGCCGCAGAA----------------------
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------------------------------------------TGCGGCGCATATGAGGTCCCGTTTTCTAGGGCATCTGC
AGCTCATCTGGTTTGGCATGTCAGCCCAAACCAGGCCCGTGACAGATGCTCAGGTTAGCAGCCCATCCATGCGAACCACA
AGACAGCAAGGCCCGCCCGCTCCCGCGAGAACGGCCTAAAACCCTAGCAAACCCGCGTTCGCGGCCGTCCGTTCTCTGCT
CGCCGCCGCGCCTCAAT--CGTCGGGAACATGAGCGGCGCGACGGGCACCGCCGACTTCTTCTACCGGGAGGCGCTGCGC
CTCGGCTACGTCGCCCGCTCCGCCTTCAAGGTCAGCACCGCCTCGTTCCTCCGGCCCCGCTCTCCCTCCCCGCGCTCCGC
CTTGGATCAATCTCTCACGCGACTCGCTTCTCTTCCCCGCCGCTGCAGCTGATCCAGATACAGAAGCAGCACAAGCTCAT
CGCCCCGGGCGCCGCCGTGCTCGACCTCGGGTGCGCCCCCGGGGCGTGGCTCCAGGTGGCCTGCCAGAACCTGGGCCCGC
TCGAGAAGGGCGGCCTGGTCGTCGGCGTCGATGTCAAGGTCCGCCAATCTGCTGATTGTGTGATTGACGGGCGGGGTGTC
GGGTCTGATTTTGGTGCTCGGTTGTTGCAGAGCAGAAGGTGAAGGTCCCCTCGGCGCACTGCGACTCACGGGTCAGGACG
GTCTGCACCGATGTGATGGCTCTGATGAAGCAGCAAGCCCGAGCTATGTCGCCGCAGGTTCGATAATAGCCTGC--TTTT
TTTAATCTACTCGATGAAATGGAATTTGGCTGGATTTGTATTTTGCTTAGATTAGTGGAATTATATATGTACTGATCAAA
TTTGTGTTATTCTGAGTTCGAAATGTGGCTTGATTGGTTCAAATTCATGACATCTTTGCACTATAAATCCATATATTGGG
ACTATTTTCACAGCAGAAATATAGTCCCGAAGAGTTCTCCCAAAAGGGTATCGGGGTTTATTGGCTGACAGTGTTTGTTA
CA-------AAAAGAACTGTTAAGTAAACCAAATTTAATGCCCTGAGTTGTTAAAATATAACCAAATAATTGTAGTTTAT
CCATCAGCCATCATATATGGTGCATAAC--------------------------------AGATGGCAAAACACATACCT
ACAAGGTCGAACAATATTTACCAGAGAATGAAGCATTGGTTGGAGATATGAGAATGTAATTGCATATGATGCTGCCTATT
ATGAAGGGCCAACATGTATTAATTAAACCGCAGTTTCTAGCCTTCTGTCAAAATCACAATATTTACTTGATTACTAGAAC
TTTTGAGACTGGTCTGTTTTATTTGTCATCACATATTTGGCCCAACTATCTGTCGTGTCCACCCCTTAAAACTATGAAGC
TTCACTAATCTCAGCATTGAAATCGCCAGTGCCTGATTTCATGGTGGATGATTAGAAATACCAGATCAAGGACTGTCACC
TATATTTGTGCTGTTGATCTTGCTAGTGGTTGCTCTGTTCATTTGTTGATTAATTTATGCTACTCTGTTGTTCAGGAACG
AGGATTTTCTGTGATATTATCCGACATGTGTCCGGTAGTTTCAGGGATCACAACCAGAGACGAAGCTATATCTTGTGAGC
TGGGCATGCGTGCGCTCTCGTTGGCAGTTGGTAAGATAAAAGTCAAAGAATCGGCTGACTATCGTGAGACTATGGAGAGG
TTTCAGACCTCCACGGGCCCAGATCCTGATGAGGACGGTGTTCTTAGACGTGGAGGCAGCCTAGTAATCAAGTTTCTTGA
GAACGAGGATATACCAGGTAGATCTTACAAGCAGATTTTGTTTTGTTATTGC-TGCAGTTCATATCATATCAACATGAAT
GATTGTCTGTTGCCCTGCTGCAGGGTTTAACAAATTTTGCAAAGAGAAGTTTAAGAAAGTATCTCTCCTGAGGCCTAAGG
CGACGAGGTCTAGTTCGAGGGAGATCTACATGATCTGCGAAGGTTTGCGGTAGAAGATTGGCCACCACTCACCTCCCTTG
AGATCCTGCAAGCTTGTGCTGAGCAGAGTGGCTGGGCCGAGAGCTCTACAAATTTGCCGTTGAGCTGTAGGCGTGTATGT
CTGAGATGATGCTAACTTCATCGGCAATTCATGATTACTGAGTTGAGGAAACT-CGATGATATCTCTTCTGGAGGAAACT
TGATGATACCTCTTTGT-----AACAGCTCTATTGGC-TTGCTTTCGTGCTTTTAGAAGAAAAACGGTTGTACTTGTTTT
GATAACCGTGTTCATTCATCTCTAACCTGTGTGCTGTATCATCTGTCTTTCAAGGCATCGTGTTTTAATATTGTTTCTTA
GCGAATTTGCTACAGTACATATTTAG------------------------------------------------------
--------------------------------------------------------------------------------
--------ATAAAACATTCTGGGTGAGAAACAGAGAAACAGAACGATTGCTCTGAAATATCTCTTATTTTAGCCGCTCTG
AAATTTCTCTTGAGCCCGTGTGGAAATCGTGCTTAGAAATGACTTGGTGGTGCCCCCTTCCGGTTGCTTGGATATTG-TT
CTTTTTAACACAGTACAATAGAAGTCGCTCACATACACAAGTATACACTTAACCCCGTGAATATACACACATACATCCTA
TCTCTATGAGCATTTCCGAGAGACTGAGCGGTCATAGCATCTTGAGATTTTACGAAGTCACCACAGCTGTCTCGCAGTCA
ATGAGAACGTCTCCTCTCACTGAACGAATATCGCCGAAAGTTTGGAGCACAAATGTCAAAACTAGGACTTGGACTCTGAT
GGGTTGGGTTGGGAATACTACTGTCCTTCTAAGTCCTAACCGTACAACCAGCTGTAAATAGGAAGCTGAATTTGCTGCTT
GTGAAGCGGGCATGGAACTAGCTGGGCACTGGTTTTTGAGTCCACCGTGACTAGAATCTGAGTGCACTTGCATCGTTGCA
CTGAGAATCCAGTATGTATAACAT-AACATAATTAAACTGGCTAAGCCAGCGATTTTTTTCCTAATTTTGAATTTC-TTT
CACTTGCAATGACAATTTACCGGGAGACAACGTGTGTAAATAGGGATCCTATTGGGTAAACTTCTGCGTGTCCCG-TTTT
TCCGCCGCATTTACTGGGACGTTTCATGAAACTAGGCCGACCGCCCTCTCCCCACCGTGTTGTGCCTTTTCTTCCTCTAA
AAA-AAATGCCTCTCATCTCTCTAGGGGACGGGA----
>chr5A_225
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----------------------------------------------------------------GAGACCTCCTATTGAA
CGCCCGCGTGCGTCCAACAGTAGAGCCTTCGCTGAAGCTCA-CGCAAACGGGCCGGCCCATTGGCAACGTCGAACCTAGG
ATTCACGAAAAACAAAACATGCCGAGAGAAGTCGAACTCC----------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------CGACCTCTTGTTGCG
GAGCACCAGTGGTAACCACTCGGACT------GTAGCATGGTAAAATGCAGCACTAAAGTTTTAAGTACCAGG-TACAGT
AGCAGATCCGTCTTTTTTCAAAAAAAACAAATTAACATTCAAGGGAAAACTGTGAATGAAGTTTCTTTAAAAAATGT---
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-------------------------------------------------------------------------GAATACT
ATTTG-AAAATGTGAACAAATTTTCAAATTCAAAGAAAACCTTTAAAAGGGAAAAAATTTGTAAGAAATGAACAAAAATT
GAATAACATGAACAACTTTCTAAGCTCTGAACAATTTTGTAATATACGCTGAATAATTTATAAATACACATTGAAGTTTT
TTATATATTCGCTGAACAATTTTAATTACACGTTGAACATTTTAATGATGTACGTTGAACCATTTTCAAATACGTAATGA
ACATTTTTTAAGATACCCTGAACATGTTGTTAATATACGGTGAACATTTTCTTAAATATACGATGAACATTGTTTTAATA
TACAATGAACTTTT-GTATAATACGGAACAAAAGAAGGAAAAGAAAAAATAAACAAAAAAGGGGAGAAGAAAGAACCATA
CGAAAAATCAGAGAAAATAAAACAAAAAAATGTGAATGAAACACAAAAGGGAAGAAAAAACAGAAATAAAAAAGCAAAGA
AAAAATCGGGAAAAAACAACTGAAAACCGGCCAAAAACAGTG-AAAAACTGGAAGC-AAAAAAACCAT--AG-AAAAAAA
AACCCAAGAAACAAGGAAACAGCAGTGAACCAAATCCGTACGTGGGCCGGCCCAAGTGGGGACTTACTTCAGCGAAGGCT
CGTCCTCTTGACGCCTGCGGGCGTCAAAT---------------------------------------------------
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>chr4A_225
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----------------------------------------------------------------GAGACCTCCTATTGAA
CGCCCGCGTGCGTCCAACAGTAGAGCCTTCGCTGAAGCTCA-CGCAAACGGGCCGGCCCATTGGCAGCGTCGAACCTAGA
ATTCACGAAAAACAAAACGTGCCGAGAGAAGTCGAACTCT----------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------GACCTCTTGTTGCG
GAGCACCAGTGGTAACCACTCGGACTGGTAGAGTAGCATGGTAAAAAGCAGCGCTAAAGTTTTAAGTGCTAGG-TACAGT
AGCAGATCCGTCTTTTTTCAAAAAAA-CAAATTAACATTCAAGGGAAA-CTGTGAACGAAGTTTCTTTAAAAAATGC---
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-------------------------------------------------------------------------GAATACT
ATTTGAAAAATGTGAACAAATTTTCAAATTCAAAGAAAACCTTTAAAAGGGAACAAATTTGTAAGAAATGAACAAAAATT
GAATAACATGAACAACCTTCTAAGCTCTGAACAATTTTGTAATATATGCTCAACAATTTATAAATACACATTGAACTTTT
TTTAATATTCGCTGAACAATTTTAATTACACGTTGAACATTTTAATGATGTATGTTGAACAATTTTGAAATACGTAATGA
ACATTTTTTAAGATACCCTGAACATGTTGTTAATATACGGTGAACATTTTCTTAAATATACGATAAACATTGTTTTAATA
TACAATGAACTTTTCGTATAATACGGAACAAAAGAAGGAAAAGAAAAAATAAACAAAAAAGGGGAGAAGAAAGAACCATA
CGAAAAATCGGAGAAAATAAAACAAAAAAATGTGAATGAAACACAAAAGGGAAGAAAAAACAGAAATAAAAAAGCAAAGA
AAAAATCGGGAAAAAACAACTGAAAACCGGCCAAAAACAGTG-ACAAACTGGAAGCAAAAAAAACCAT--AGAAAAAAAA
CCCCCAAGAAACAAGGAAACAGCAGCGAACCAAATCCGTACGTGGGCCGGCCCAAGTGGGGACTTGCTTCAGCGAAGGCT
CGTCCTCTTGACGCCTGCGGGCGTCAAATAGAATCTGCC-----------------------------------------
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>chr4A_225
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----------------------------------------------------------------GAGACCTCCTATTGAA
CGACCGCGTGCGTCCAACAGTAGAGCCTTCGCTGAAGCTCA-CGCAAACGGGCCGGCCCATTGGCAGCGTCGAACCTAGA
ATTCACGAAAAACAAAACGTGCCGAGAGAAGTCGAACTTCCGACCTCTCATTATTTTCGTGCATTTTTGTACGTGGCGGT
TCCTCTTCGTGAGACCTCCTATTGAACGTCCGCGTGCGTCCAACAGTAGAGCCTTCGCTGAAGCTCACGCAAACGGGCCG
GCCCATTGGCAGCGTCGAACCTAGAATTCACGAAAAACAAAACATGCCGAGAGAAGTCGAACTCCCGACCTCTTGTTGCG
GAGCACCAGTGGTAACCACTCGGACTGGTAGGGTAGCATGGTAAAAAGCAGCGCTAAAGTTTTAAGTACTAAG-TGCAGT
AGCAGATCCGTCTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAATACT
ATTTG-AAAATGTGAACAAATTTTCAAATTCAAAGAAAACCTTTAAAAGGGAACAAATTTGTAAGAAATGAACAAAAATT
GAATAACATGAACAACTTTCTAAGCTCTGAACAATTTTGTAATATATTCTGAACAATTTATAAATACACATTGAACTTTT
TT--ATATTCGCTGAACAATTTTAATTACACGTTGAACATTTTAATGATGTACGTTGAACAATTTTGAAATACGTAATGA
ACATTTTTTAAGATACCCTGAACATGTTGTTAATATACGGTGAACATTTTCTTAAATATACGATGAACATTGTTTTAATA
TACAATGAACTTTTCGTATAATACGGAACAAAATAAGGAAAAGAAAAAATAAACAAAAAAGGGGAGAAGAAAGAACCATA
CGAAAAATTGGAGAAAATAAAACAAAAAAATGTGAATGAAACACAAAAGGGAAGAAAAAACAGAAATAAAAAAGCAAAGA
AAAAATCGGGAAAAAACAACTGAAAACCGGCCAAAAACAGTG-AAAAACTGGAAGC-AAAAAAACCAT--AGAAAAAAAA
CCCC-AAGAAACAAGGAAACAGCAGCGAACCAAATCCGTACGTGGGCCGGCCCAAGCGGGGACTTGCTTCAGCGAAGGCT
CGTCCTCTTGACGCCTGTGGGCGTCAAATAGGATCTGCC-----------------------------------------
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>chr5B_797
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--------------------------------------------------------------GTTTTCTAGGGCATCTGT
AGCTCATCTGGTTTGGCATGTCAGCCCAAACCAGGCCCATGAGACATGCTCATGTTAGCAGCCCATCCATGCGAACCACA
AGACAGCAAGGCCCGCCCGCTCCCGCGAAAACGGCCTAAAACCCTAGCAAACCCGCGTTCGCGGCCGTCCGTTCTCCGCT
CGCCGCCGCGCCGCAATATCGTCGGGAACATGAGCGGCGCGACGGGCACCGCCGACTTCTTCTACCGGGAGGCGCTGCGC
CTCGGCTACGTCGCCCGCTCTGCCTTCAAGGTCAGCACCGCCTCGCTCCTCTGGCCCCGCTCTCCCTCCCCGCCCTCCGC
CTTGGACCAATCTCTCACGCGTCGCGCTTCTATTCCCCGCCGCTGCAGCTGATCCAGATACAGAAGCAGCACAAGCTCAT
CGCCCCGGGCGCCGCCGTGCTCGACCTCGGGTGCGCCCCCGGCGCGTGGCTCCAGGTGGCCTGCCAGAACCTTGGCCCGC
TCGAGAAGGGCGGCCTGGTCGTCGGCGTCGATGTCAAGGTCCGCCAATCTGCTGATGCTGTGATTGATGGGCGGAGTGTC
GGGTCTGATTTTGGTTCTCGGTTGTTGCAGAGCAGAAGGTGAAGGTCCCCTCAGCGCACTGCGACTCGCGGGTCAGGACG
GTCTGCACCGATGTGATGGCTTTGATGAAGCAGCAAGCCAGGGCGATGTCGCCGCAGGTTCGATAATAGCCTGTTTTTTT
TTTAATCTACTCGATGAAATGGAATTTGGCTGGATGTGTATTTTGCGTAGATTAATGGAATTAC----GTACTGATCAAA
TTTGTGTTATTCTGAGTTCGAAATGTGGCTTGATTGGTCCAAATTCATGACATCTTTGCACTATAAATCCATATGTTGGG
ACTATTTTCACAGCAGAAATATAGTCCCGAAGAGTTCTCCCAAAAGGGTGTCGGGGTTTATTGGCTGACAGCCTGACAGT
GCTTGTTAGAAAAGAACTGTTAGGTAAACCAAATTTAATGCCATGAGTTGTTAAAATATAACCAAATAATTGTAGTTTAT
CCATCAGCCATCATATATGGTACATAAC--------------------------------AGATGGCAAAGCACATAGCT
ACAAGGTCGAACAATATTTATCAGAGAATGAAGCATCAGTTGGAGATATGAGAATGTAGCTGCATATGATGCTGCCTATT
ATGAAGGACCAACATGTATTAATTAAACGGCAGTTTCTAGCCTTCTGTCAAAATCACAATATTTAGTTGATTACTAGAAC
TTTTGAGACTGGCCTGTTTTGTTTGTCATCACATATTTGGCCCAACTATCTGTCGTGTCCACCCCTTAAAACTATGAAGC
TTCAGTAATCTCAACATTTAAACCGTCAGTGCCTGATTTCATGGTGGATGATTAGAAATACCAGATCAAGGACTGTCAGC
TATATTTGTGCTGTTGATCTTGATAGTGGTTGCTCTGTTCATTTGTTGATTAATTGATGTTACTCTGTTGTACAGGAACG
GGGATTTTCTGTGATATTATCCGACATGTGTCCGGTAGTTTCAGGGATCACAACCAGAGACGAAGCTATATCTTGTGAGC
TGGGCATGCGTGCGCTCTCGTTGGCAGTTGGTAAGATAAAGGTCAAAGAATCGGCCGACTATCGTGAGACTATGGAGAGG
TTTCAGAGCTCCACAGGCCCAGATCCTGATGAGGACGGTGTTCTTAGACGTGGAGGCAGCCTAGTAATCAAGTTTCTTGA
GAACGAGGATATACCAGGTAGATCTTACAAGTAGATTTTGCTTTATTTTTTC-TGCAGTTGATATCATAGCAACATGAAT
GATTGTCTGTTGCCCTGCTGCAGGGTTTAACAAATTTTGCAAAGAGAAGTTTAAGAAAGTATCTCTCCTGAGGCCTAAGG
CGACGAGGTCTAGTTCGAGGGAGATCTACATGATCTGCGAAGGGTTGCGGTAGAAGATTGGCCACCACTCACCTCCCATG
AGATCTTGCAAGCTTGTGCTGAGCAGAGTGGCTGGACCAAGAACTCTACAAATTTGCCGGTGAGCTGTAGGCGTGTAGGC
CTGAGATGATGCTAACTTCATCGGCAATTCATGATTACTGAGTTGAGGAAACTCCGATGGTATCTCTCCTGGAGGTGATT
TGGTTTGGTGCCTTTGTTAAAGAACAGCCGTATTGGCTTTGCGTTCGTGCTTTTAGAAGAAAAAAGGTTGTACCTGTCTT
GATAACCGTGTTGATTCGTCTCTAACCTGTGTGCTGTATCATCTGTCTTCCAAGGCATCGTGTTTTAATATCATTTCTTA
GCGAATTTGCTACAGTACATATTTAG------------------------------------------------------
--------------------------------------------------------------------------------
--------ATAAAACATTCT-GGTGAGAAACAGAGAAACAGAACGATTGCTCTGAAAT----------------------
----TTCTGTTGAGCGCGTGTGGAAATCGTGCTTAGAATGAC------GGTGCCCCCTTCTGGTTGCTTGGAGGCTATTT
TTTTAAAACAGTACAA---AGAAGTCGATCACATACACGAGCATACACTCACCCCTATGAATATATGCATGAGCATCCTA
CCCCTATGGGTGCTTCCAAGAGATCGAGCCGGCATAGCATTTTGAG----------------------------------
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-----------------ATAATAA-AATAGAATTAAACTGGATAATCCAGCGATTTTC--CCTAATTTTGAAATTGTTTT
CACTTGCAATGACAATTTACCGGGAGACAACACGTGTAATTAGGGATCCTATTGGGTAAACATCCGCGTGTCCCGTTTTT
TCTGCCGCATTTACCGGGACGTTTCAC-AAACTGGGGCGACCGCCCTCTCCCCACCGTGTTCTGCCTTTTCTTCCTCTAG
AAAGA---------------------------------
>SNPs
----S------------------S-------------------S------------------------S------S---S
--S-------------------S------------------------------S-SS-------S---------------
-------------------S-----------------------------S--------SSSSSS----------------
--------------S---S-------S---------SSSSSS--------------------------------------
-----SS-----------------S-S-----S-----------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------S---S-S
--SS--SSS-------------S---S---S-S---S---S-----------------S-----------S-SS------
----S--------------------------S---------S--S------------S--S---S----------S----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------S-S-
----S----------------------------------SS---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----S-----S----S--S-------S--------SSSSSSS--------------------S-SSSSS----------
---S------------------S---------S--------------S--------------------------------
---------------------------------------SSS--------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S-----------------S-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------S---------------------------------------
---------------S----------------------------------------------------------------
----------------------------------------S---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------S------------------------S----------
----------------S---------S------------------S------------------S-----------S---
------------------S-------------------------------------------------------------
-------------S-------------------------------S----------------------------------
-------------------------------------S------------------------------------------
-------------------S--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------
--------------------------------S-----------------------------------------------
------------------------------------------------------------------------S---S---
-------------------------------S----------S-------------------------------------
------------------------S-------------------------S-----------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S-------------------
-----------------------------------------S--------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------S------S---------------------------
--------S---------------------------------------------S-------------------------
-------------------------------------S------------------------------------------
------------------------------------------------------------------S-------------
------S------------------------------S------------------------------------------
------------------------------------------S-------------------------------------
---------------------------------------------------S----------------------------
--------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSS----------------SSS-----------------------------------------------------
-------------------S--------S-----------------------------------------S---------
-----------S-------------S----S--------------S--------S-------SS-------S---S----
------------------------S---SS--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------S----S---S------------S----S-----------------------S----
------------S--------S-----------S-------S-----------------------SS---S---------
----------------------------------------S----------S----------------------------
------------------------------S---SSSS
>forward_347
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------AAAAACAAAACATGCCGCGC-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------
>reverse_2281
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------TCGCCAATCTGCTGATGCTG--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------
>forward_560
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------ACTCCCGACCTCTGGTTTCA
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------
>reverse_2686
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------TGGTATCGGGGTTTATTGGCT--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------
>forward_1720
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------GCGTCAAATAGGATCTGCCG----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------
>reverse_3083
--------------------------------------------------------------------------------
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------------------------------------------GAACTATCTGTCGTGTCCACCC----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------
>forward_1721
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------GCGTCAAATAGGATCTGCCGA---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------
>reverse_3718
--------------------------------------------------------------------------------
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-------------------------------------TGAAGGTTTGCGGTAGAAGAT----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
>forward_1901
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------CCTAGCAAACCCGCGTTCA-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------
>reverse_4052
--------------------------------------------------------------------------------
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---------------------------------------------------TAGGCATCGTGTTTTAATATTGTTTCT--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
