>input_sequence_43707
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-------------------------------------------------------------------------ATGAAGC
GCATAGTGGGGAG-------CCCGGGGACATGGAGCGGCATGGCGCTCCGGGTGTCGCAGTGCGTCTTCGCCGCCGGATC
CGTCTTCGCCATGTTCTCTGCTTATGGCTTCTCCAACTACAGCGCCTACTTGTACTCTCTCTCCC---------------
----------------------------------CCCTGCCACCAGTTTCATTCTCCAGCAAATTAGTGCTACTTCTCGG
CTTGCTGTG-TCTGTGTGTTGAGATGAGTTCCTAGATTTTCT-------TTCTTCCTTCAGTAATCGTTTCTTGGATGTC
CTCCCCTCCGTGTGTTTTCTTGCAAATTCATGAGC--------ATCACTCAAGTAGCATCCCCACTGCTTCAAGCTCAAG
CTGTTACTTCGGTTGTAAAATTCAGAGTCCCCCCTCCCTCTTGGAG------------TTTTTGGGGGAGGTTTCCTGTA
CAGAAGCCTAGATGCATGCTGTTGGTCCCTGATGAT----TTTACTTTTTCATTCAGCATCATGCCATACGAATCACTGC
CCAATTTATCTTAGATATACACCGCCGGAAAAGGAACAACATACTATTTATTAGTTAGAAGA-------AAAAAAAAATC
ACGTCTGAGC----------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------TAGTAGTAGA-----------------------
----------------------------------ATATTTATAGAACCCTTCTTGAGCAGCAGACCAAAACAGAGGAGTA
GATTAATCACTTG----------------AAGAGTAGATAAAGGACAGAACAACTGAGCTC-------------------
----ACTTCCTAGATTAGCTGATTTGTCTTCCGATGGGAGATGCGTGTTTTTGTTGAAGCTGCCCTACCAAGGATTCATG
TTCAGGTAAGGTGATTGCTGCTGGAAATTGACTGA---------------------------------------------
---CAATTGAACTGTGCCTAGAATTTTTCCGAGTAAAACTTCGTTTGGTGTGATCTAATCACTGGGATGTTGAG------
-------------------TTCCCGGCAGGAAGGGGTGAACAGCACCATACTTGTTCAAAAATGGGACTGGGATATTGGA
CGTGTTTTCTTTGTGTATGTGATTTTGTCAGCGTACGTGTAAAGAACGAAGCCTCATGTTTTCCATTTACCTACAGTTTT
TCTTCCCATGATAATAT--T---TTATCAGGATTGTTAAACTTAGGCTCTGTGTGCCCACATGTGACTTGTCTTGACTGC
TGTG------CA----TGCTGATGAGCGCCGATGATTTATCTTTTTCATATCAAGTTCATATCATTGAGACTGTGAACTG
CATAG-GTCTAAAATGTGTTGACTACTCTTCAGAATTGCCTGTGCAGGAGCTC------GTTGTGTT-GACATCAACTAA
CGCCTGTATTATGGTCTCCTG------CAGCTACCTGAACTTTGCTTCGGTGCTGCAGTTTCTGTGGAGTTTGCCCCTTG
CTTGTCTGGATATCTTTTCTCTCAGGAATCAAAAGGATCTTCACGCACCGGCTCGTCTATTGCTCATTGTTATCGTCGAC
TGGGTAAGTCGTTCGCTTTGTCTCTTCTATTGTCCACGGAGCTACGTCTGAATTAGTTGAAAGCATGCACCGCAAC----
--AATTAAACCCAGATTTTTTTAAATCAATG--TTAGTTCTTAGGAAAACAGAAATTCATCA------------------
-------------------------------------------------------------------------------G
GTGCTCGATCGAACTTTGCCGACGAACTGTCAGGTAGTTAGCAAAGGTC-------------------------------
------------TATCTGAGTGATCACAT----TTTGAATGCATTGCAGGCCGTGGCGGTTCTCATGTTCTCAGGAGTTT
GTGCCGCCGCCTGCCTGACGATTTTCTTCATGAAAGATGTGAACTTCTGTGAGGGGTTCTCGTGGCTGGCCTGCAATCAG
TTCGCGCTTTCGGTCACTCTGGCATTCATCACGTGGTCGCTGCAAGCTGCGTCTTCTTTCTCCGGGTTCTGGCTACTGGT
CTCGTTCTTCTAG-------------------------------------------------------------------
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-------------------------------------------------------------------------------
>chr2B_1_TraesCS2B01G508200
TGAAACCATGGCTTCAAGAAGGAAGAAAAATGGTCAACAATTTAGCAACGACATTTCACGAAGCATTTGCTAGGCATAGT
GACCCCCATGCATGGACAACATCCGTAGGGATGGATGATACTAGACGGGCGATAGGTGTGGAACGCCAGCGTAGGAAAAG
CGGCGGAGGTCCGGCAAGAGCTTGGTGGGTGGCCGGGGTGGTACAGTGACGACATTGGTCATGGAGGAAGCAGATGTAGA
GAAAGGGAAAAGGGATGAGGTACGGGTCCTGATGTGGTTTTAGGTGGGCTGAAAAA-CGGGCGCGCGGACTGATCCATGG
ATCGATGCAGGACGTCGTTGAATGGCAAACTATGTTCGGACTACTCAGTTTGGACGTTTGCTGCAATTTAAGGTT-GCTG
TCTATAAACTCCATGCCGCGAGAGAGAGAGAATGGGTTGTA-----AAAAAATAATTTAATACTAC---ATAGGAATAGA
CATATTCACACATTTTCCATTACGGACCT--TGTTGGTACCGTTCTATTTCTCGATGCCAGCGGAGTTTATCTACT---T
GGATGATTGATGCCTCATGTTTTTCATGTATATCCATAGTTTTACCACGCTTCCAATTCAAAAAGAAAAAGTTTTACCAC
ACTCCTGCCATCATTCTTGCACTTCGAATCGCTCGATGCAGCTTCCCATTTGGTGCAAGGGTAAAGCGTAAAGCTACCTG
GGA---TCACATGGCCCTGCTCGCCCTAGCCAAAACTGACAGGACACGGTGATTTCTTGGCAATGGGCACCTGTTACCCA
TATAGGGAAAAGTGAAAATGGTGTGAAATTCCTGCTCTCTTCTTTTGCCCATCACCTTTCCTATCTATCTATCT------
--CACGCGAGCCAAG-----TGCACACAACAAGTTAGCTAGTGCTGCAGATCCTGCCCGGGTAGCCAGT-AGGACTCCAT
CAGTCAGGTT-CTCAATCCCACCCACCTCTCCGCACCGCAGCAATCGAAGCCCAGGCAGTGCAGAGGCAGGGGATGAAGC
GCATAGTGGGGAG-------CCCGGGGACATGGAGCGGCATGGCGCTCCGGGTGTCGCAGTGCGTCTTCGCCGCCGGATC
CGTCTTCGCCATGTTCTCTGCTTATGGCTTCTCCAACTACAGCGCCTACTTGTACTCTCTCTCCC---------------
----------------------------------CCCTGCCACCAGTTTCATTCTCCAGCAAATTAGTGCTACTTCTCGG
CTTGCTGTG-TCTGTGTGTTGAGATGAGTTCCTAGATTTTCT-------TTCTTCCTTCAGTAATCGTTTCTTGGATGTC
CTCCCCTCCGTGTGTTTTCTTGCAAATTCATGAGC--------ATCACTCAAGTAGCATCCCCACTGCTTCAAGCTCAAG
CTGTTACTTCGGTTGTAAAATTCAGAGTCCCCCCTCCCTCTTGGAG------------TTTTTGGGGGAGGTTTCCTGTA
CAGAAGCCTAGATGCATGCTGTTGGTCCCTGATGAT----TTTACTTTTTCATTCAGCATCATGCCATACGAATCACTGC
CCAATTTATCTTAGATATACACCGCCGGAAAAGGAACAACATACTATTTATTAGTTAGAAGA-------AAAAAAAAATC
ACGTCTGAGC----------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------TAGTAGTAGA-----------------------
----------------------------------ATATTTATAGAACCCTTCTTGAGCAGCAGACCAAAACAGAGGAGTA
GATTAATCACTTG----------------AAGAGTAGATAAAGGACAGAACAACTGAGCTC-------------------
----ACTTCCTAGATTAGCTGATTTGTCTTCCGATGGGAGATGCGTGTTTTTGTTGAAGCTGCCCTACCAAGGATTCATG
TTCAGGTAAGGTGATTGCTGCTGGAAATTGACTGA---------------------------------------------
---CAATTGAACTGTGCCTAGAATTTTTCCGAGTAAAACTTCGTTTGGTGTGATCTAATCACTGGGATGTTGAG------
-------------------TTCCCGGCAGGAAGGGGTGAACAGCACCATACTTGTTCAAAAATGGGACTGGGATATTGGA
CGTGTTTTCTTTGTGTATGTGATTTTGTCAGCGTACGTGTAAAGAACGAAGCCTCATGTTTTCCATTTACCTACAGTTTT
TCTTCCCATGATAATAT--T---TTATCAGGATTGTTAAACTTAGGCTCTGTGTGCCCACATGTGACTTGTCTTGACTGC
TGTG------CA----TGCTGATGAGCGCCGATGATTTATCTTTTTCATATCAAGTTCATATCATTGAGACTGTGAACTG
CATAG-GTCTAAAATGTGTTGACTACTCTTCAGAATTGCCTGTGCAGGAGCTC------GTTGTGTT-GACATCAACTAA
CGCCTGTATTATGGTCTCCTG------CAGCTACCTGAACTTTGCTTCGGTGCTGCAGTTTCTGTGGAGTTTGCCCCTTG
CTTGTCTGGATATCTTTTCTCTCAGGAATCAAAAGGATCTTCACGCACCGGCTCGTCTATTGCTCATTGTTATCGTCGAC
TGGGTAAGTCGTTCGCTTTGTCTCTTCTATTGTCCACGGAGCTACGTCTGAATTAGTTGAAAGCATGCACCGCAAC----
--AATTAAACCCAGATTTTTTTAAATCAATG--TTAGTTCTTAGGAAAACAGAAATTCATCA------------------
-------------------------------------------------------------------------------G
GTGCTCGATCGAACTTTGCCGACGAACTGTCAGGTAGTTAGCAAAGGTC-------------------------------
------------TATCTGAGTGATCACAT----TTTGAATGCATTGCAGGCCGTGGCGGTTCTCATGTTCTCAGGAGTTT
GTGCCGCCGCCTGCCTGACGATTTTCTTCATGAAAGATGTGAACTTCTGTGAGGGGTTCTCGTGGCTGGCCTGCAATCAG
TTCGCGCTTTCGGTCACTCTGGCATTCATCACGTGGTCGCTGCAAGCTGCGTCTTCTTTCTCCGGGTTCTGGCTACTGGT
CTCGTTCTTCTAGTGATCTCACTAGCTAGGTGCTTTGAATCACCGTCGCGCCATGCTAATTGCCAACTAGTGATTGCAAA
AAAAA----TTAAAAGTGCAAATTGCCTGT----------------------------------CAGGAGGGTAAATCAG
TTCAGTTGCAATGTGCTCGGGACACTTGTTAGTGTT-------------------------------AGATTTGAGTTAC
CGGCGTCCTTCATTACTTATTGATAGACTGCATGTCTGATAGCTTGTCTTCAGTTTGGTGGAATAGTTACTGTTTAGGTG
ATGTGG------AATCACTAATATGGGGTACCTATTAGTGCTCCAAGTGTCTATTATCTTAACTTTTTTTACGGATTGCT
GTTTTCCTTTTGATGGAGTAGAGTACCTGTAGCAGGTATACACAGA------------------------------GGGG
AAAGCCGGCGGTGGCTACCGGTCTATACAACCAGCTTTGGGTTGAAGATCGCTAAAAGGAGGGATTCATATACTCCCTCC
GTTTCTTTTTAGTCTCCATATAAGATTTGGTCAAAATCAAACTTCGCAAAGTTTCATTAACATTATAGAAAAATATATCA
TCATCTACAATACTAAAGTTATATGTCATTGAAATTAATATCATCATTCATCTAATAATGTTAATTTCATATTGTGAATA
TTGATATCTTTTCCTACAAAGCTAGTCAGACTTTACATAGTTTGACTTTGACCAATTCTTATATGCGAATTAAAAAGAAA
CAAAGGGAGTATGTCGCATTATGTGACAAAATGGCGACATATATATTCAGGGAATTCCATATAGTATGTCGCATTCTGCG
ACAAAATGGCGAAGGTTCGCACAGGGATGAAGCGAGCGAATGAGTTATGGGGCGGCGCATTTGTACAACGTGAGCGTAGT
ACGCGATCCATTTTGGGAACCTTCCAGACGGTCTTGAAAACCTTCTAGAAGGTTCCTAAACTGGTTTTCTCTTTCCTGAT
GTTTTCTTCCACTGGTTTT-CAGGTTTTTCTTTTTCTGTTTATTTTTAAAAAAATAAGAAATTTCAAAAAGTGTTCCAA
>chr2A_159
--------------------------------------------------------------------------------
------------------------------------------------------------------------------AG
CTGCGGAGGTCCAACAAGAGCTTGGTGGGCGGCCTGGATGGTACAGTGACAACATCGGTCATGGAGGAAG-AGATGTACG
GAAAGGGAAAAGG---GAGGTACGAGTCCGGATGTGGTTTTAGGTGGGCTGAAAAAACGGGCACGCAGACTGATCCGTGG
ATCGATGCAGGACGTCGTTGGATGGCAAACAATGTCCAGACAATACAGTTTGAACATTTGCGGCAATTTAAGGTTCGCTG
TCTATAAACTCCATGCCGCCAGAGAGATAAAGCGAGAATGGGATGTAAAATATAATTTAATACTAC---ATACGAATAGA
CCTATTCACACATTTTCCATTACGGACCT--TATTGGTACCATTCTATTTCTCGATGCTAGCGGAGTT-ATCTACT---T
GGATGATTGATCCCTCATGTTTTTCATGTATATCCATATTTTTACCACACTTCCAATTCAAAAAAGAAAA---TTACCAC
ACTCCCGTCATCATTCTTGCTCTTGGAATCGTTCAATGCAGGTTCCCATTTGGTGCAAGGGTAAAGCGTAAAGCTACCTT
A---GTTTACATGGCCCTGCTCGCCCTAGCCAAAACTGATTGGACACGGTGATTTCTTGGCAATAGGCACCTGTTACTCA
TATAGGGAAAAGTGAAAATGATGTGAAATTCCTACTCTCGTCGTTTGCTCATCACCTTTCCCATCTATCTATCT------
--CAGACGAGCCAAGTCAAGTGCACACAACAAGGTAGCTAGTGCTACAGATCCTGCCCGGCTAGCCAGGAAGGACTCCAT
CAGCCAGGTTTCTCCACCCCACCCACCTCTCCGCACCGAAGCAA------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------
>chr2D_397
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------TG
TCTATAAACTCCATGCCGCGAGAGAGAAC----------GGGTTGTAAAAAATAATTTAATACTACTACATAGGAATAGA
CATATTCACACATTTTCCATTACGGACCT--TGTTGGTACCGTTCTATTTCTCCATGCTAGCGGAGTTTATCTACT---T
GGATGATTGATGCCTCA--------------------AGTTTTACCACACTTCCAATTCAAAAA-AAAATGTTTTACCAC
ACTCCTGCCATCATTCTTGCTCTTGGAATCGTTCAATGCAGCTTCCCGTTTGGTACAAGGGTAAAGCGTAAAGCTACCTG
GGA---TCACATGGCCCTGCTCGCCCTAGCCAAAACTGACAGGACACGGTGATTTCTTGGCAATGGGCACCTGTTACCCA
TATAGGGAAAAGTGAAAATGATGTGAAATTCCTGCTCTCGTCTTTTGCTCATCACCTTTCCCATCTATCTATCTATCTAT
CTCACACGAGCCAAGTCAAGTGCACACAACAAGGTAGCTGGTGCTGCAGATCCTGCCCGGCTAGCCAGGAAGGACTCCAT
CAGTC-AGGTTCTCCGCCCCGCCCACCTCTCCCCACCGCAGCAAGCGAAGCCGAGGCAGGGCAGAGGCAGAGGATGAAGT
GCATAGTGGGGAG-------CCCGGGGACATGGAGCGGCATGGCGCTGCGGGTGTCGCAGTGCGTCTTCGCCGCCGCATC
CGTCTTCGCCATGTTCTCTGCCTACGGCTTCTCCAACTACAGCGCCTACTTGTACTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTGCCACCAGTTTCATTCTACAGCAAATTAGTGCTACTTCTCCG
CTTGCTGTGATCTGTGTGTTGGGATGAATTCCTACATTTTTCTTTCCACTTCTAGTTTCGGTAATCCTTTCTTGAATGCC
CTTCCCTCTGTGCGTTTTCTTGCAAATTCATGAGC--------ATCACTCAAGTAGCATCCCCAGTGCTTCGAGCTCAAG
CTGTTACTTTGGTTGTAAAATTCAGAGT---CCCTCCCTCTTGGAG------------TTTTTGGGGGAAGTTTCCTGTA
CAAAAGCCTAGATGCATGCTGTTGGTGCCTGATGAA----TTT--TTTTCCATTCGGCTTCATGCCATACAAATCACTGC
CCAATTTATCTTAGATATACACCGCCAGAAAAGGAACACCA---TATTTATTAGTTAGATAGAAAGAAGAAAAAAGAATC
ACGTCTGAGC----------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------TAGTAGTAGA-----------------------
----------------------------------ATATTTATAGAACCCTTCTTGAGAAGCAGACCAAAACAGAGGAGAT
GATTAATTACTTG----------------AAGAGTAGATAAAGGACAGAACAACTGAGCTCGCCTGAACCGTCCTTTCAG
CCTCACTTCCTAGATTAGCTGA--------------------------TTTTGTTGAAGCTGCCCTACCAAGGATTCATG
TTCAGCTAAGGTGATTGCTGCTGGAAATTGACTGA---------------------------------------------
---CAATTGAACTGTCCCTGGAATTTTTCCGAGTAAAACTTCGCTTGGTGTGATCTAATCACTGGGGTGTTGAGGGGCCG
GTATTCGTTCCAAGCCTAATTCCCAGCAGGAA-GGGTGAACAACACCATACTTGTTCAAAAATGGGACTGGGATATTGGA
CATGTTTTCTTTATGTATGTGCTTGTGTCAGCGTACGTGTAAAGAACGAAGCCTCATGTTTTCCGTTTACATACAGTTTT
TCTTCCCATGATAATAT--TTTATTATCAGGATTGTAAAACTTAGGCTCTGTGTGCCAACATGTGACTTGTCTTGACTGC
TGTGTC--------TGTGCCGGTGAGCGCCGATGATTTATCTTTTTCATATCAAGTTCATATCATTGAGACTATGAACTG
CATAA-GTCTTAAATGTGTTGTCTACTCTTCAGAATTGCCTTGGCAGGAGCTC------GTTGTGTT-GACATCAACTAA
CGCGTGTATTATGGTCTCCTG------CAGCTACATGAACTTTGCTTCGGTGCTGCAGTTTCTGTGGAGTTTGCCCCTTG
CTTGTCTGGATATCTTTTCTCTCAGGAATGAAAAGGATCTTCACGCACCGGATCGTCTATTGCTCATTGTTATCATTGAC
TGGGTAAGTCGTTCGCTTTGTCACCTCTATTGTCCATGGAGCTACGTCTGAATTAGTTGAAAGCAGGCACCGCAAC----
--AATTGAACCCAGATTTTAT---ATCAATG--TTAGTTCTTAGGAAAACAGAAATTCAGGATTAGTGCAACTCATGCTT
CTCTGTTGGCTAAGTTCTTGTTTTGCCTCACTTTAAGAGAATAGGATAG---CCTTAAAGAGACTTGTTGC---------
-----------------------------------------CACAGATAGATTGCAGCC---------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------CAG
TTCGCGCTTTCGGTCACTCTGGCATTCATCACGTGGTCGCTGCAAGCTGCGTCTTCTTTCTCCGGGTTATGGCTACTGGT
CTCGTTCTTCTAGTGATCTCAA----TAGGCGCTTTGAATCACCGTCGCGTCATGCTAATTGCCAGTTTTTTCTTTTTTT
TGTTGCGGG----AAATGCTAATTGCCAGTTAATGATTGCATTTTTTAAGGGCTAACTTCCAGTCAGGAGGGTAAATCAG
TTGAGTTGCAATGTGCTCAGGACACT------TGTT-------------------------------AGATTTCAGTTAC
CGGCGTCCTTCATCACTTATTGATAGACTGCACGTCTGATAGCTTGTCTTCAGTGAGGTGGAATAGTTATTGTTTAGGTG
ATGTGGG------ATCACTAATATGGGGTACCTATTAGTGCTCCAAGTGGCTTTTGTCTTTACTTTTTTTGCGGATTGCT
GTTTTTCTTTTGATGGAGTAGGGTACCAGTAGCAGGTAGTACA-------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------
>chr2A_397
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------------------------------TG
TCTATAAACTCCATGCCGCGAGAGAGATAGAGAGAGAAGGGGATGTAAGAAATAATTTAATACTAC---ATAGGAATAGA
CATATTCACAAAATTTCCAGTACGGACCTTGTGTTGGTACCGTTCTATTTCTCGATGCTAGCAGAGTT-ATCTACGTACT
GGATAATTGATGCCTCGTGTTTTTCATGTATATCCATA--------------------------------GTTTTACCAC
ACTCCTGTCATCATTCTTGCTCTTGGAATCGTTGAATGCAGCTTCGCATTTGGTGCAAGGTTAAAGCGTAAAGCAACCTG
GGTTGTTCACATGGCCCTGCTCGCCCTAGCCAAAACTGACAGGACACGGGGATTTCTTGGCCATGGGCACCTGTTTGTCA
TACAGGGAAAAAGGAAACTGATGTGAAATTCCTGCTCTCATCTTTTGCCCATCACCTTTCCCATCTATCTATCTATCTA-
------------------------------------GCTAGTGCTGCACATCCTGCCCGGCTAGCCAGGAAGGACTCCAT
CAGCCAGGTTTCTCCACCCCACCCACCTCTCCGCACCGAAGC---------CCAGGCAGTGCAGT-GCAAGGGATGAAGC
GCATAGTGGGGAGCCCGGGCCCCGGGGACATGGAGCGGCATGGCGCTGCGGGTGTCGC-------------CGCCGCATC
CGTCTTCGCCATGTTCTCTGCTTATGGCTTCTCCAACTACAGCGCCTACTTGTACTCCCTCTGCC---------------
----------------------------------CCTTACCACCGGTTTCATTCTCCACCAAA----TGCTGCTTCTCCG
CTTGCTGTG-TCTGTCTGTTGAGATGAGTTCCTAGATTTTCT-------TTCTCGCTTCAGTAATCGTTCCTTGGATGCC
CTCCCCTCCGTGTGTTTTCTTGCGAATCCATGAGCTGATGAGCATCACTCAAGTAGCATCCCCAATGCTTCAAGATCAAG
ATGTTACTTTGGTTGTAAAATTCAGAGT---CCCTCCCTCTTGGAG------------ATTTTGGGGGAAGTTTCCTGTA
CAAAAGCCTAGATGCATGCTGTGGTGCTTCATGGTTTTATTTT--ATTTCCACTCATCATCATGCCATAGAAATCACTGC
CCAATTTATCTTAGATATACACCGCCGGACCGG--------------------------------------AAAAAAATC
ACGTCTGAGC----------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------TAGTAGTAGA-----------------------
----------------------------------ATATTTATAGAACCCTTCTTGAGAAGCAGACCAAAACAGAGGTGTA
GATTGATCACTTG----------------AAGAGTAGATAAAGGACAGAACAACTGAGCTCGCCTGAACTCTCCATTCAG
TCTCACTTCCTAGATTAGCTGATTTGTCTTTCGATGGGGCATGCATGTTTTTGCTGAAGCTGCCCTACCAAGGATTCATG
TTCAGGTAAGGTGGTTGCTACTGGAAATTGACTGA---------------------------------------------
---GAATTGAACT---------------------------TCGCTTGGTGTGATCTAATCACTGGGGCGTTGAGGGGCCG
CGATTCATTCCAAGCTCGATTCCCGGCAGCAAGGGGTGAACAACACCATACTTGTTCAAAAATGGGACTGGGATATTGGA
CATGTTTTCTTTATGTATGTGCTTGTGTCAGCGTACGTGTAAAGAACGAAGCCTCATGTTTTCCATTTACCTACAGTTTT
TCTTCCCATGATAACAT--T---TTATCAGGATTGTTAAACTTAGGCTCTGTGTTCCAACATGTGACCTGTCTTGACTGC
T-----AGTATACGTGTGCCGGTGAGCGC-------TTATCTTTTTCATATCAAGTTCATATCATTGAGACTATGAACTG
CATAA-GTCTTGAACGTGTTGACTACTCTTCAGAATTGCCTGTGCAGGAGCTC------GTTGTGTTTGACATCAACTAA
CGCGTGTATTATGGTCTCCTG------CAGCTACCTGAACTTTGCTTCGGTGCTGCAGTTTCTGTGGAGTTTGCCCCTTG
CTTGTCTGGATATCTTTTCTCTGAGGAATGAAAAGGATCTTCAAGCACCGGCTCGTCTATTGCTCATTGTTATCATTGAC
TGGGTAAGTCGTTCGCTTTGTCTCTTCTATTGTCCATGGAGCTACGTCTGAATTAGTTGAAAGCATGCACCGCAACCGCA
ATAATTGAACCCAGAGTTTTGTATCAATGTG--TTAGTTCTTAGGAAAACATAAATTCAGGATAAGTGCAACTCATGCTT
CTCTGTGGGCTAAGTTCTTGTTTTGCCTCACTTTAAGAGAATAGGATAATAACCTTAAAGAGACTTGTTGC---------
-----------------------------------------CAAAGGCC-------------------------------
------------TATCTGAGTGATCACAT----TGTGAATGCATTGCAGGCCGTGGCGGTTCTCATGTTCTCAGGAGTCT
GTGCCGCCGCCTGCCTGACGATTTTCTTCATGAAGGATGTGAACTTCTGTGAGGGGTTCTCGTGGCTGGGATGCAATCAG
TTCGCGCTTTCGGTCACCCTGGCATTCATCACGTGGTCGCTGCAAGCTGCGTCTTCTTTCTCCGGGTTATGGCTACTGGT
CTCGTTCTTCTAGTGATCTCAA----TAGGTGCTTTGAATCACCGTCGCGTCGTGCTAATTGCCAGTTAATGGTTGCATT
ATCTTTTATTTTAAAGTGCTAATTGCCAGTCAAGGAT---------------------------------GGTAAATCAG
TTCAGATGCAATGTGCTCAGGACACT------TGTTCATCACCGTCGCGTCGTGCTAATTGCCGGTTAGATTTCAGTTAC
CGGCGTTCTTCATCACTTATTGATAGACTGCATGTCTGATAGCGTGTCTTCAGTTAAGTGGAATAGTTACTGTTTAGGTA
ATGTGGAAGTGGAATCACTAATATGGGGTGCCTATTAGTGCTCCAAGTGGCTTTTGTCTTCACTTTTTTTACGGATTGCT
GTTTTTCTTTTGATGGAGTAGAGTACCAGTAGCAGCCTAGCAGGTAGTACACAGAGAACGGATCAAAAACGAAAATGGGG
AAAGTCGGCGGTGGCTACCGGTCGGTACAACCTGCTTTGGGTTGAAGATAGCTAGAGGGAGGGATTCATATAAGTCGT--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------ATTATGTGACAAAATGGCGACATATATATTCAGGGAATTCCATA---TATGTCGCGTTCTGCG
ACAAAATGGCGAAGGTTCGCACAGGGATGAAGCGAGCGAATGAGTTATGGGCCGGCGCATTTGTACAACGCGAGCGCAGT
ACGCGATCCGTTTTGGGAACCTTCCATACGTTTTGG-AAACCTTCTAGAAGGTTCCTAAGCTGGTTTTCTCTTTCCTGAT
G-TTTCTTCCACTGGTTTTTCAGGTTTTTTCTTTTCTGTTTCTTTTGTAAAAAATCAAAAATCTCAAA-----------
>chr4B_923
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------CTCCAT
CGATC-GGTTTCTCCACCTCA--CACCTCTCCGCAGAGC--CGAGCAGAGCCCAGGCAGAG-AGAGGCAGGGGATGAAGC
GCATAGTGGGGAGCCCA-------GGGACATGGAGCGGCATGGTGCTGCGTCTGTCGCAGTGCTTCTTCGCCGCCGCATC
TTCCCTTGCCATGTGCTCCGCTTTCGGCTTCTCCAACTACAGCGCCTACTTGTAA-------------------------
----------------------------------------------TTTCATTCTCCCACAAC----TGTTTCTTCTATT
CTTCCTTC------------------------------------------------------------------------
--CCCCTTTGTGTGTTTTCTTGCAAATTCATGAGCAA------ATCACTCAAGTAGCAAGCATATAACTATGTTTCATTT
TGGGTCTTTCAAGGTTTTGGTTAAATTGCGTGGAGTTCTTCTCTTTCTTTCAAGATTAATTTTTAGCGAAGTTTCATGCA
CAAAAGGCTAGATGGCGTTAGTGTCGAATACTACACATTTTCCTTCGGTG-----------------------TCATGGC
CCAATTTTTTGGGGAACACATGGATTGACTTCTTAAACTATAGTATCTGCTAATCAGTACATCATGCATACACAAGTATC
TATCTACATTTAACTTGGCACATACAAAATACGGCAGAATCAGGAGGCTTCGTTTTGCTAAACTTCGAAACATATCTCCA
TGACTACCTTCAATCCTTCGAAAGCGTATTTGTCCAGTCCGTCACCCACCTAGTAGTGAATATATGGCCTCAAGGAAATG
CCACTTTATTAGGTGATTTCCTAATTCAAGTTCCAAGAGTGTTTATGTAGTAGTAGATTTCGTTCCATTACAAAGTTTAT
GCCCATTTGCAGCACTACAAACTCGACATTGTACATATTTATATTCAATCGTCGATAATCTGGGGAGTTTACTTGAACTT
AAGTGTTCTTTTCTTTATGTTTTTTGTGAAAGACTAGATACAGTGTTTGTCTAATATGTACGCTGCAGCATTTTGGTTTC
CCAGTGAATCCTTATTGTCAGTGTCAAATCTCTTGTTGCCGTTCAATATTAAAGATGAATATTCCCAAAGATTATATGTC
ACACAACCCAACTTCTAGGCATGTGCACTTGTTGAGGACTTACACAAGATAGGAAACATGCAGTGCAGGTTAGGCCATCC
TACCAATTGACCTCTCCATAGAATCTTTCCAAGTTAACATTCACTTGGCACAATCTAGTCAGGGACCAGTTTGTATCATC
CGAAACTCACAACAGAGCGTCGTG--------------------------------------------------------
------------------------------------------------------------------TTTCATTCAATACC
TACTCCCATGATAAAAGAAT---TTATGAGGATCATGCAAGTGAGGTTCTATGT--CAGCATGTGACATATCTTGACTGT
TGTA------CAAGTGTGCCGTTGTGCGCCAATGATGTAACTTTTTCATATCAAGTTCATATCACTGAGACTATGAACTG
CATAAAGTCGTAAGTGTCTTTATTACTC-TTAGAATTGCTTAGGCAGGAGCTTAAGTGTGTTTTGTT-GACATAAACTAA
CGAGCATATTATGGTCTCTGTTTATTTCAGCTACATGAATCTAGTGTTGATCCTGCAGCTTTTGTGGAGTTTGTACTTGG
CTTGTCAGGATATATTTTCTCTGAGGAATAACAGGGATCTTCATGCCCCGGATTTTCTATTGTTCTTTGTTATCATTGAT
TGGGTAAGTCGTACACTTTGTCACTGCTATTGTCCATGCAACTATGCCTGGATTAACTGAAGGCATGCACTGAAAC----
--AACTTAACCCAGTTTTTTTTATCAACATTAATTAGTTCTTACGAAAAGTGAAATTCAGGATAATTGCAACGCATGCTT
CTCTATTGGCTAAGCTCTTGTTTTGCCTCCCTGTATGAGAATAAGACAG---CCTTAAATAGACTTGCTGTTTACCTTTG
GTGCTCGGTCGAACTTTGGTGACAAATTTTCCACATGAGCAAGAAATTTTAACAACTGATATGCTTTGCATTACCTTTTG
GTTGACCAACGGTATGTGAGTGATCACATCACTTGTGAATGCATTGCAGGTCATGGCAATTCTCATGTTCTCTGCATTCT
GTGCCTCTGCCAGCGTGACGATTTTCTTCATGAAGGATATGAACTTCTGCGCGGAATACCGGCGTCTGGACTGCAATCAG
TTCACACTTTCAGTCACTCTGGCGTTCTTTACATGGTTGTTGCAAGCTGCGTCTTCTTTCTCCGGGTTCTGGCTACTGGT
TTCCTTCTTCTAGTGATCTCA-----------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------
>chr7A_1990
--------------------------------------------------------------------------------
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---TCCCATGATAAAAAAAA---TTATGAGGATTGTGCAAGTTAGGTTATGTGT--CAGCATGTGACATGTCTTGACTGT
TGTAGGAGTACAAGTGTGCCAATGTGCGCCAATGATGTATCTTTTTCATATCAAGTTCATATCATTGAGACTATGAACTA
CATAAAGTCTTAAGTGTCTTTATTACTC-TCAGAATTGCTTGGA-AGGAGTTTAAGTTTGTTTTGTC-GACATCAACTAA
CGAGTATATTATGGTCTCTCTTTATTTCAGCTACATGAATCTAGTGTTGATCGTGCAGCTTTTGTGGAGTTTGTGCTTGG
CTTGTCAGGATATATTTTCTCTGAGGAATAATAGGGATCTTCATGCCCCGGATTTTCTATTGTTCTTTGTTATAATTGAT
TGGGTAAGTCGTGCACTTTGTCACTGCTATTGTCCATGCAGCTACACCTGAATTATCTGAAGGCATGCACTGAAAC----
--AACTGAACCCAATATTTTTTATCAACATTAATTAGTTCTTAGGAAAAAATGAAATTCA--------------------
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>chr5A_1990
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---TCCCATGATAAAAAAAT---TTATGAGGATTGTGCAAGTTAGGTTCTGTGT--CAGCATGTGACATGTCTTGACTGT
TGTAGGAGTACAAGTGTGCCAGTGTGCGCCAATGATGTATCTTTTTCATATCAAGTTCATATCATTGAGACTATGAACTA
CATAAAGTCTTAAGTGTCTTTATTACTC-TCAGAATTGCTTGGGCAGGAGCTTAAGTTTGTTTTGTC-GACATCAACTAA
CGAGTATATTATGGTCTCTCTTTATTTCAGCTACATGAATCTAGTGTTGATCGTGCAGCTTTTGTGGACTTTGTGCTTGG
CTTGTCAGGATATATTTTCTCTGAGGAATAACAGGGATCTTCATGCCCCGGATTTTCTATTGTTCTTTGTTATAATTGAT
TGGGTAAGTCGTGCACTTTGTCACTGCTATTGTCCATGCAGTTGCGCCTAAATTATCTGAAGGGATGCACTGAAAC----
--AACTGAACCCAATATTTTTTATCAACATTAATTAGTTCTTAGGAAAAAATGAAATTCA--------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--
-S----------SS---------------S----S--S------------S----S--------------S-------SS
-------------SSS--------S----S--------------------------------S---S---------S---
--------------------S---------S----S-S---S-SS-------S--S-----S------------------
---------------------------S---SS-S-SS-SS---------------------------------------
----------------------------------------------------------S---------------------
------------------------------------------------S---------------S---------------
--------------------S---S------S--S---------------------------------------------
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--------------------S------------------S---------------------S------------------
-----S---------------------------S--------------------------S-------S-----------
--------------S-S---------------------------S-----------------------------------
-----------------------------------------------S----------------------------S---
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------------------------------------------------------------------------------S-
-----------------------------------------------------SS-----------------------S-
----------------------------------------------------------------S---------------
-----------------------------SS--------------------------------------S----------
--S----------------------------------------SS----S--------------------S---------
--------------------------------------S--SSS---------------SSS------------------
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---------------------------------------------------------S----------------------
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------------------------------S-------SS----S-----------------------------------
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---------------S---------------------------S----------------------S-------------
------------------------------------------S-------------------------------------
-S----------S--------S--S-------------------------------------------------------
---------------------------------------------------------S----------------------
-------------------S----------------------------------------------------S-------
----S-----S---------------------------------------------------------------------
---S----------------------------------------------------------------------------
-----------------------------S--------------------------------------------S-S---
------------------------------------S-------------------------------------------
------S----------------S-----------------------------------SS-------------------
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-------S----------SS---S--S-S--SSSSS-SSSS---------------------------------------
----------------------------------S-------------------------------------------S-
----------------------------------S----------------------------------S----------
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---------------------SSSSS------------------------S--------------SS--S--S-----SS
-SSSS------S-------S-------S----------------------------------------------------
------------------S-------SSSSSS-----------------------------------------S------
-------------S-----------------------------------------S------------------------
-------------------------------------------------S--S--S----S-------------------
-----S---------------------S----------SS--SSS-----------------------------------
----S------------------SS-------S----------------S----S-S---------------SSS-S-SS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSS--------------------------------------------SSS--------S-------
---------------------------------------------------S------------------S-----S---
---------S----------------S---S-S-S-S----------------------S--------------------
-S---------------------------SS----------S----SS-------S-S----S-----SSSSSSSSSSS
>forward_139
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---------------------------------------ACTAGACGGGCGATAGGTGT---------------------
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>reverse_2111
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------------------------------CCGATGGGAGATGCGTGTTT------------------------------
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>forward_914
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--------------GCCAAGTGCACACAACAAGT----------------------------------------------
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>reverse_3540
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-------------------AAATTGCCTGTCAGGAGGGT-----------------------------------------
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-------------------------------------------------------------------------------
