>input_sequence_43697
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------------------------------------------------------------------ATGGAGCCTGGGGG
AAGAAGTC-CTAGCGCTG---CCACTACCTCTGCTGCTGCAACAGCTCACATTCTTGTCTTGTGGGACAGAAGAGGAGGA
GAA---AGCTTAGGGGGTATATCAGAGGAAGGAGAGGGGAGGCGGCATCGATCGATGGGGTGCCGGTCCTGCGACAAGCC
CAAGATGAACTACAGGAAGGGGCTGTGGTCTCCTGAGGAGGACCAGAGGCTGAGGGACTACATCCTCAAGCACGGCCTCG
GCTGCTGGAGTGCTGTTCCTGCAAAAGCTGGTGAGCTCCCTCTCTGTCTCTGAATGTAGGAGTGATTAGTTGATACTTCT
TTCCCCTTTCATGCATGGAAATTGCTCCATGCCAATGCTTGCAGAAACAGCTTATGGCTGATTGTGAATCATAGTCTACT
A-----GTCCAGTAGCATTAGCAATAATTTGATCAACCTGCATCGTTTTCAATGGTTTTGTTTGTATTTATCTTGGAGTT
CTACTTGGAACCTTACATCCATGATCCAGCTCTAGTCTTGACATATTTAAAAAAAAAATCAATATACTCTGCTATTTAGC
ACCAATGCACCTACAAAGAGCTAATTGCCTAGAAATCTGTTTGACCTTCACATGATCCAAGCTTGAACATAGTCCCCATG
TCAGTCAAGAACTCAAAATTCTAGCACAAAATGTGATGTGGCAATTTGAGCTAGTTGCCTAGTAGTATCTCTGAAACACT
TCTTTTTACCTGAATTATGCCTGAATTTGTTGTGCTCTGTGTGTTTGTTTGGTAACTCGCAGGTCTGCAGAGGAATGGCA
AGAGCTGCCGGCTGCGTTGGATCAACTACCTGCGGCCCGGATTGAAGCGCGGGATGTTCTCTCAGGAAGAGGAGGACGTT
GTCATCAACCTCCAAGCCAAGTTGGGCAACAAGTAAGGAATCCT------------------------------------
CACCTAAACATCTCGAAAACTTGAGAACAATACAAAACAAAAAACCAAAATTCCGACTACACAAACAAAAATCAACTGAA
TTTTGAAATCAAAA-CCCCTTCGAAAGCGGCATGTTTCGCGGCGAAAAGATGACACAATTCAGAC-------------TT
GGTTTTCCATGGC------GC----TGATGGTCTGAGATCTCTGT---TCTTTGGTCAGGTGGTCGCAGATCGCGATGCA
TCTGCCGGGGAGGACGGACAACGAGGTGAAGAACTACTGGAACTCGTACCTCAAGAAGCGGGTGATGCAGCTGGGCTCCA
ACTCCAGCTCCAACCCGGCCAGCAAGAACGCCTCGCCGGAGCTGCTCACCTCCATGAGCGCCACCACCGAGCTCATCATG
ACCAGCGGCGGC---GGCGGCGGCGGCGGCAGCACGGCGACGTCGACCCACGACCACGACGCCAACATCAGCAGCAGCGG
CGCCATCTCGGCCGCGGAGCCGTTCGTCGACCAGCACGAGCACCAGCACCACCACCAGCAGCAGGCCAAGAACTTCGTCT
TCGCCGACTGGATGCCG---ACTGCCGCGGTGACGCCGGCGGGGCCGGAGAGCTACTCCATGTCCGCGCACTGGCCCGCC
TCCACGGCCAGCTCCGGCAACGTGACGCCGTCGCACGGCGCCTTCGTCGGGGACCAGATGAGCGGCAGCAGCTACGCCGC
GCTGCAGCACCCGCACCAG---------------------CACCACCACCACCAGAGCGCGGTCA---------------
---CCGTGGCGGGCGCTCATGCCAGCGCCGGCGGCATGGTCGCCGGAGGCGGCTACTTCGACCTGCTCAACATGGGCGAC
ATCTACGGGGGGTTCAGCACGACGAACGACGATCTGCTCTTCTGA-----------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------
>chr6A_1_TraesCS6A01G037700
TGAAAACAACTGGTGTGCACAAAGGACAAAGTCTCGAGACATGCATGGTGATGTGAGCTGCCAAACTGAAGCAGGTAGCC
ACTCTGCAGCTTAGCATATAATCTCAGTCCTACTAACCATATGCCATATGGAGTGCCATTCACCGACAGACAGCTGGTGA
ACACTTGTACTCTTCGTAAACGAGCACACGAAAA---CAGG-----TCGATTCGCCTCGATGAATATTACG----AGTGG
TGCCATTGTGCCAACTCAGTCTGTTCCAGAACTTGGTGAATGTGAAAGAAAAAAAAT---TATGGTTGGCATCCAAGTCC
CTCATCATGGCTAACCTGTGTCAGAAAGGTCCTTGTTTATGGATGCATTTCATCTCTTCTTGATACTTGCAGTGCAAA-T
CCTTCTGGATCCTGACTGTTCTGTCTC-------------------------TTCCTGGCCTTCGTAATGATTGACATTT
GGAAGAGG--CCTTGTCATTGATGATTAATCCAAGAGCCCGTTTCATTGCAAGAACAGCTCATGTCAATGCTCCACCCGT
ATCATTGGTGCACAAAGTCTGACCTTCATCGCGCCGATTATTGGATAATAGTGTTTTCTTACTACGCAAATTTGATCATC
CGAAGAGGG--------------------------------CGGCACATTCTCGGATTATCAGCGCTCGCGTTTATCTCA
GAATG------CTCTCTAAATTTTAAGTCCAGTAAAACTCAGAAGAAAATAAACAAACTGTTGATGATCCAAGTGACCTA
TCATATAAATAAT-----CGCCGATTAGAGAAACATCCCAGTTACTGACTCGAGAACAAAATGTGTTCCGAGTGCCAGCG
AGCATCCTTCCATCCA------------CACAATCATTAGCCCGAGGCCAAAACCGAGTGAATAACCCTCGAGAATCTTT
GAGGAAGGAGGT-GACATCCTCTGACCAAGCCT-------CCAAGCTCATGATCTGAACCATGTGCAGCCATTACCAACT
CAATTCCACGGGACTAAACTAAGCCGGGCAGCGAAATGCAGCAGCCCTTTAAATCACAGGGTGCACATGGAGCCTGGGGG
AAGAAGTC-CTAGCGCTG---CCACTACCTCTGCTGCTGCAACAGCTCACATTCTTGTCTTGTGGGACAGAAGAGGAGGA
GAA---AGCTTAGGGGGTATATCAGAGGAAGGAGAGGGGAGGCGGCATCGATCGATGGGGTGCCGGTCCTGCGACAAGCC
CAAGATGAACTACAGGAAGGGGCTGTGGTCTCCTGAGGAGGACCAGAGGCTGAGGGACTACATCCTCAAGCACGGCCTCG
GCTGCTGGAGTGCTGTTCCTGCAAAAGCTGGTGAGCTCCCTCTCTGTCTCTGAATGTAGGAGTGATTAGTTGATACTTCT
TTCCCCTTTCATGCATGGAAATTGCTCCATGCCAATGCTTGCAGAAACAGCTTATGGCTGATTGTGAATCATAGTCTACT
A-----GTCCAGTAGCATTAGCAATAATTTGATCAACCTGCATCGTTTTCAATGGTTTTGTTTGTATTTATCTTGGAGTT
CTACTTGGAACCTTACATCCATGATCCAGCTCTAGTCTTGACATATTTAAAAAAAAAATCAATATACTCTGCTATTTAGC
ACCAATGCACCTACAAAGAGCTAATTGCCTAGAAATCTGTTTGACCTTCACATGATCCAAGCTTGAACATAGTCCCCATG
TCAGTCAAGAACTCAAAATTCTAGCACAAAATGTGATGTGGCAATTTGAGCTAGTTGCCTAGTAGTATCTCTGAAACACT
TCTTTTTACCTGAATTATGCCTGAATTTGTTGTGCTCTGTGTGTTTGTTTGGTAACTCGCAGGTCTGCAGAGGAATGGCA
AGAGCTGCCGGCTGCGTTGGATCAACTACCTGCGGCCCGGATTGAAGCGCGGGATGTTCTCTCAGGAAGAGGAGGACGTT
GTCATCAACCTCCAAGCCAAGTTGGGCAACAAGTAAGGAATCCT------------------------------------
CACCTAAACATCTCGAAAACTTGAGAACAATACAAAACAAAAAACCAAAATTCCGACTACACAAACAAAAATCAACTGAA
TTTTGAAATCAAAA-CCCCTTCGAAAGCGGCATGTTTCGCGGCGAAAAGATGACACAATTCAGAC-------------TT
GGTTTTCCATGGC------GC----TGATGGTCTGAGATCTCTGT---TCTTTGGTCAGGTGGTCGCAGATCGCGATGCA
TCTGCCGGGGAGGACGGACAACGAGGTGAAGAACTACTGGAACTCGTACCTCAAGAAGCGGGTGATGCAGCTGGGCTCCA
ACTCCAGCTCCAACCCGGCCAGCAAGAACGCCTCGCCGGAGCTGCTCACCTCCATGAGCGCCACCACCGAGCTCATCATG
ACCAGCGGCGGC---GGCGGCGGCGGCGGCAGCACGGCGACGTCGACCCACGACCACGACGCCAACATCAGCAGCAGCGG
CGCCATCTCGGCCGCGGAGCCGTTCGTCGACCAGCACGAGCACCAGCACCACCACCAGCAGCAGGCCAAGAACTTCGTCT
TCGCCGACTGGATGCCG---ACTGCCGCGGTGACGCCGGCGGGGCCGGAGAGCTACTCCATGTCCGCGCACTGGCCCGCC
TCCACGGCCAGCTCCGGCAACGTGACGCCGTCGCACGGCGCCTTCGTCGGGGACCAGATGAGCGGCAGCAGCTACGCCGC
GCTGCAGCACCCGCACCAG---------------------CACCACCACCACCAGAGCGCGGTCA---------------
---CCGTGGCGGGCGCTCATGCCAGCGCCGGCGGCATGGTCGCCGGAGGCGGCTACTTCGACCTGCTCAACATGGGCGAC
ATCTACGGGGGGTTCAGCACGACGAACGACGATCTGCTCTTCTGAAGC-TCAGAGCTAAAATTCTGATGATGCCGTGACC
CCTGTGCATGTGTGACAAACAAAATTTGTTCTTTGTGTTCATGTTGTCTATGAAAAATGGAAAGAGGTGGGTATACTGCT
TGATTAATTTGATTCTTCTTCTGTAAGGAAAAGTTTAAATGTGATCATGTTAATTAGAGGGAATTCC-CCTTAGGTTGGA
CATAATTCTTTCGTTGTTGTTTTCCCCGCAAT-AAAAAGGCGTATCGATTTGTATCGTGTAAA-GTGCAAATGTGAGCTC
AATTGTAATAGATTTGGTAAATTTTAGCAAATATTCGTCCCAGGGGTAAA-------------------------TTTTA
ACAAGTTATGATGTTGAACTACACTTTATCTACCCATGTGAGTGGAGAAAATGTATGATTGTAA-------TGTCTTGCC
ATCTTAATTATGAGATTG---------------------------------AATTATGCTCGAGTGCTTCCTAAAAGCAA
AGATAAAACTTTTAAAAAGCCAAGGTCAGTTGGAAATTTTCTAAGAAATATAGCTAGCAAAAAGAAGTCAACTGAAAT--
-----------------------------------------------TTCCTACTCCTAAATTCTTATGAAATTTCAAAC
TGTGCC----------------------------------------------------------------------TTGG
CAAATTGTGGCCTGAAACAAACAGGAATTAAATCATGCACAGCTCAGTGCTGCTCCAAGAGTTCTTGCATTCAAAGAATA
TGGACTTGAACTCAGTGGAGTTGATACAGAAAAGGCAGTAATAAAACACCAACATTTCATAGATGTTC------ATTCTA
A---AGTAAACCTTACACAGATGTTGTAAAACTGTGTAACCTTACATGCTTAACTCTAGTAGATATTCTCGCCAAAGGAG
AGAGGTATATAGATAGCACTCTGATTTTCTCGTTACATATAATGTGATACTACAATGACATGGATGACAAAGG-AACAAA
AGGGCAAACAGGA-ACTTAGTTCTTCTTGCGAGAAAAGTGGTTGTCGTTCGGATTCCGTTTCCCGCTGAACATTGCGAGC
GCCTTCCTTACTGGAGGTTTCAGCTCCACCTTCTTCTCGCCGCT
>chr6D_1
TGAAAACAACTGGTGTGCACAAAGGACAAAGTCTTGAGACATGCATGGTGATGTGAGCTGCCAAACTGAAGCAGGTAGCT
TCTCTGCAGCTTAGCATATAATCTCAGTCCTACTAACCATATGCCATATGGAGTACCATTCACCGACAGACAGCTGGTGC
ACACTTGTACTCTTCGTAAATGAGCACACGAAACAGGCAGG-----TCGATTCGCCTCGATGAATATTAATTACCAGTGG
TGCCATTCTGCCAGCTCAGTTTGTTCCAACACTTGGTGAATGTGAAAGAAGAAA--T---TATGGTTGGCATCCAAGTTT
CTCATCATGGCTAACCTGTGTCAGAAAGGTCCTTGTTTATGAATGCATTTTATCTCTTCTTGATACTTGCAGTGCAAA-T
CCTTCTGGATCCTAACTGTTGTGTCCCTTCTTGTGTCCCTGGT---TCTCCATTCCTGGCCTTCCTAATGATTGACATTT
GGAAGAGG--CCTTGTCATTGATGATTAATCCAAGAGCCCGTTTCATTGCAAGAACAGCTCATGTCAATGCTCCACCGGT
ATCATTGGTGCACA-AGTCTGACCTTCATCGCGCCGATTATTGGATAACAGTTTTTTCTTACTACACAAATCTGATCATC
CGAAGAGGG--------------------------------CGGCACATTCTCGGATTATCAGCGCTCGCGTTTATCTCA
GAATGGG------CTCTGAATTTTAAGTTCAGTAAAACTCAGAAGAAAATAAACAAACTGTTGATGATCCAAGTGACCTA
TCATATAAATAATT-----GCCGATTAGAGAAACATCCCAGTTACTGACTCGAGAACAAAATGTGTTCCGAGTGCCAGCG
AGCATCCTTCCATCCA------------CACAATCATTAGCCCGAGGCCAAAACCGAGTGAATAACCCCCGAGAATCTCT
GAGGAAGGAGGTAGACATCCTCTGACCAAGCCC-------CCAAGCTCATGATCTGAACCATGTGCAGCCATTACCAACT
CAATTCCACAGGATTAAACTAAACCGGGGAGCGAAATGCAGCAGCCCTTTAAATCACAGGGTGCACATGGAGCCTGGGGG
GAAGAAAGTCTAGTGCTG---CCACTACCTCTGCTGCTGCAACAGCTCATCTTCT---CTTTGGAGGCAGAAGAGCAGGG
GCAGGGAGTTTAAGGGGTATATCAGAGGAAGAAGAGGGGCAAAGGCGGG---CGATGGGGTGCCGGTCCTGCGACAAGCC
CAAGATGAACTACAGGAAGGGGCTGTGGTCTCCTGAGGAGGACCAGAGGCTGAGGGACTACATCCTCAAGCATGGGCTCG
GCTGCTGGAGTGCTGTCCCTGCAAAGGCTGGTGAGCTCTCTCTCTGAA--TGGATGTAGGAATGGTTTGTTGCCACTTCT
TTCCCTTTTCATGTATGGAGATTTCTGCATGCCAATGCTTGCAG-AACAGCTTATGGCTGATTGTGAATTATATTCTACT
ACTAGTGTCTAGTAGCATTAGCAATAATTTGATGAGCTTGCATCGTTCCTAATGGTTTTGTTTGTATTTAGCTTAGAGTT
CTGATTGGAACATTACATCCATGATCTAGTTCTAGTCTTGACATATTTAAAAAAAATCCC-ATATACTCTGCTATTTAGC
AACAATGCACCTATAAAGAGCTAATTGCCTAGAAATCTGTTTGACCTTCACATGATCCAGGCTTGAACATAGTTCCCATA
TCAGTCAAAC--------TTCTAGCAC-AAATGTGAGGTGGCAATTTGAGCTAGTAATTGC----TATCTGTTAATCACT
TCCTTCTACCTGAATTATGCCTGAATTTGTTGTGCTCTGTGT-TTTGTTTGGTGACTCAAAGGTCTGCAGAGGAATGGCA
AGAGCTGCCGGCTGCGTTGGATCAACTACCTGCGGCCCGGATTGAAGCGCGGGATGTTCTCGCAAGAGGAGGAGGACGTC
GTCATCAACCTACAAGCCAAGCTGGGCAACAAGTAAGGGATCCTCACACACCTCAACTC-----------------CCAC
CACCTAAACTTAACAAAAATATGAGAGCC------------------AAATGCTGAAGATACAAACGAAATTCAACTAAA
TTTTGAAGTCGAAGCCCCCTTCAAAAACGGCGTGTTTCGTGGCGAGAAAAGCTCGAGAAAGACACGACCTTTCACACTTT
TGTTTTTCATGGC------GATGGATGATGATCTGAGATTTCCTTTCATCTTTGGTCAGGTGGTCGCAGATCGCGATGCA
TCTGCCTGGGAGGACGGACAACGAGGTGAAGAACTACTGGAACTCGTACCTGAAGAAGCGGGTGATGCAGCTGGGCTCCA
ACTCCAGCTCCAACCCGGCCAGCAAGAACGCCTCGCCGGAGCTGCTCACCTCCATGAGCGCCACCACGGAGCTCATCATG
ACCAGCGGCGGCGGCGGGGGCGGGGGCGGCAGCACGGCGACGTCGACCCACGACCACGACGCCAACATCAGCAGCAGCGG
CGCCATCTCGGCCGCCGAGCCGTTCGTCGACCAGCACGAGCACCAGCACCACCACCAGCAGCAGGCCAAGAACTACGTCT
TCGCCGACTGGATGCCGACCGCGGCGGCTACGGCGGCGCCCGGGCCGGAGAGCTACTCCATGTCCGCGCACTGGCCCGCC
TCCACGGCCAGCTCCGGCAACGTGACGCCGTCGCACGGCGCGTTCGTCGGGGACCAGATGAGCGGCAGCAGCTACGCCGC
GCTGCAGCACCCGCACCAG---------------------CAGGAACACCACCACCACCACCACCACCAACATGGCTCCA
CCGCCGCCGTGGGCGCTCACGCCGGCGCCGGCGGCATGGTCGCCGGAGGCGGCTACTTCGACCTGCTCAACATGGGCGAC
ATCTACGGCGGGTTCACCACGACGAACGACGATTTGCTCTTCTGAAGC-TCAGAGCT-AAATTCTGATGATGCCGTGACC
CCTGTGCATGTGTGAT--AAACAAAATTTGTTCTGTGTTCATGCTGTGTATGAAAAATGGAAAGAGGTGGGTATACCGCT
TGATTAATTTGATTCTTCTTCTGTAAGGAAAAGTTTAAATGTGATCATGTTAATTAGAGGGAGTTCCTCCTTAGGTTGGA
CATAATTCTTTCATTGTCGTTTTCCCCGCAATAAAAAAGGCGTATCGATTTGTATTGTGTAAA-GTGCAAATGTGAGCTT
AATTGTAATAGATTTGGTAAAACTTAGCAAACATTTGTTCCGGGAGTACTCGAA------------------------TA
ACAAGTTATGATGTTGAACTACACTTAC-CTATCCATGTGAGTGGAGAAAATGTATGGTTGTAA-------TGTCTTGCT
ATCTTAATTACGAGACTG---------------------------------AAAAAATCTTTAGAAGAGCTCAAGGTCAA
------------------------------TGGAAATTTTCTACGGAATACAGTTAGCACAAAGAAACCACCTGAATAGT
CTTATCATATCACGGTCCTG--CAAATCAAACACCCACCTAGAAGAATCCCTACTCCAAAAATCCTTCCAAATT------
----------------------------------------------AATTTGAATCTTTCAGCCGTCGCTAAAAGTTTGG
CAAAAAATATTGCTGCTCCAA-------------------------------CTCAAAGAGATCTTGCATTCAAAGAATT
TGGATGACT-CTCAGTGGAGTTGATACAGAAG-AGCAATAATAAATCACCAACATTACGTAGATGTCC------TTTCTG
AAGTAGTAAACCTTACATAGATGTTGCGGAAGTGTGCAACCTTACATGCTTAAATCTAGTAGACATTCTTACCAAAGAAG
AGAGGTATATAGATAGTACTCTGGTTTTTTCATTAC--ATAGTGCGAGACTACAATGCCATGGATGACAGAGGTAACAAA
AGGGCAAACAGGTGACTTAGTTCTTCTTGCGAGAAAAGTGGTTGTCGTTTGGATTCCGTTTCCCGCTGAACATTGCGAGC
GCCTTCCTTACTGGAGGTTTCAGTTCCACTTTCTTCTCGCCGCT
>chr6B_1
TGAAAACAACTGGTGTGCACAAAGGACAAAGTCTTGAGGCATGCATGGTGATGTGAGCTGCGAAACCGAAGCAGGTAGCT
CCTCTGCAGCTTAGCATATAATCTCAGTCCTACTGACCATATGCCATATGGAGTGCCATTCACCGACAGACAGCTGGCGA
ACACTTGTACTCTTCGCAAACGAGCACACGAAACAGGCAGGTCGATTCGCTTCGCCTCGACGAATATTAACTACCAGCGG
TGCCATTGTGCCAGCTCGGTTTGTTCCAAACCTCGGTGAATGTGAAAGAAAAAAGCTATATATGGTTGGCACCAAAGTTC
CTCATCATGGCTAACCTGTGTCAGAAAGGTCCTTGTTTATGCATGCATTTTCA-TCCTCTTGATCCTTGCAGTGCAAAAT
CCTTCTGGATCCCAACTGTTGTGTCCCTTCTTGTGTCCCTGCTGCCTCTCCATCCCTGGCCTG-GTAATGATTGGCATTT
GGAAGAGGGGCCTTGTCATTGCTGATTAATCCAGGAGCCAGTTTCATTGCAAGAACAGCTCATGTCAATGCTCCACCCAT
ATCATTGGTGGACA-AGTCTGACCTTCATCGCGCCGATTATTGGATAACAGTGTTTTCTTACTACACAAATCGATCAAAC
ATTATGCTGTTAATGTTACCCCACCAGTTCATCCGAAATCACGGTGCATCCTTGGATTGTTAGCGCTCGCCTTCGTCTTC
ATCTAAGAGTACTCTCTGAATTTTAAGCTCAGTAAAACTCGGAAGAAAATAAACAAACTGATGATGATCCAAGTGACCAA
TCATATAAATAAAAAACACGCCGATTAGAGAAACATCCCAGTTACTGACTCGAGAACAAAATGTGTTCCGAGTGCCAGCG
AGCATCCTTCCATCCATCCATCCATCCACACAATCATTAGCCCGAGGCCGAAACCGAGTGAACAACCCGCGAGAGTCTCT
GAGGAAGGAGGTAGACATCCTCTGACCAGGCCTCCAGGCACCAGGCTCATGATCCGAGCCATGTGCAGCCATTACCAACT
CAATTCCACAGGACTAAACTAAACCGGGGAGCGAAATGCAGCAGCCCTTTAAATCACAGGGTGCACATGGAGCCCGGGGG
AAGAAAGGCCTAGTGCTGCCACCACCACCTCTGCTGCTGCAACAGCTCACCTTCTTGTCATAGGAGGCACAAGAGCAGGG
GCAGGGAGTTTAAGGGGTATATCAGAGGAGGAAGAGGGGCAAAGGCGGG---CGATGGGGTGCCGGTCCTGCGACAAGCC
CAAGATGAACTACAGGAAGGGGCTGTGGTCTCCTGAGGAGGACCAGAGGCTGAGGGACTACATCCTCAAGCATGGGCTCG
GCTGCTGGAGCGCTGTCCCTGCAAAGGCTGGTGAGCTCTCTCTCATGAAAACTG---------------------CTTCT
TTCCCCTTTCATGCATGGACATTGCTGCATGCCAATGCTTGCAA-AACAGCTTATGCCTGACTGAATTATATAGTCTACT
GCTAG--TCTAGTAGCATTAGCAATAATTTGATGAGCTTGCATCGTTTCTAATGGTTTTGTTTGCATTTAGCTTGGAGTT
CTACTTGGAACCTTACATCCATGATCTAGTTCTAGTCTTGACACAATTTC-AAAAAGATCATTATACTCTGCTATC-AGC
AACAATGCACCT--AAAGAACTAATTGCTTAGAATTCTGTTTGACCTTGACATGATCCAAGCTTGAACATGGTTTCCATA
TCAGCCAAAATGG--------TAGCAC-AAATGTGATGTGGGAATTTGAGCTA---ATTGC----TATCTCTGAAAAACT
TCTTTTTACCTGTATTATGCCTGAA---------CTCTGTGT-TTTGTTTGGTGCCTCAAAGGTCTGCAGAGGAACGGCA
AGAGCTGCCGGCTGCGTTGGATCAACTACCTGCGGCCCGGATTGAAGCGCGGGATGTTCTCCCAGGAGGAGGAGGACGTC
GTCATCAACCTCCAAGCAAAGTTGGGCAACAAGTAAGCGATCCTCACACACACACACACACACACCCCATCTCTCACCAC
CTAATGAACATCCCAAAAACATGAGAACAATGCAAACCAAAAAT-CAAAATGCTGACGGCACAGACAAAAACCAGCTGAA
TTTTGAAGTCGAAA-CCCCTTCGAAAACGGCGCGTTTCGCGGCGAGAAATGCTC-----------------------TTT
CGTTGTTCATGGTGGTGATGATGGATGATGATCTGAGATTTCCTTTTATGTTTTGTCAGGTGGTCGCAGATCGCGATGCA
TCTGCCGGGGAGGACGGACAACGAGGTGAAGAACTACTGGAACTCGTACCTCAAGAAGCGGGTGATGCAGCTCGGCTCCA
ACTCCAGCTCCAACCCGGCCAGCAAGAACGCCTCGCCGGAGCTGCTCACCTCCATGAGCGCCACCACGGAGCTCATCATG
AC---------CGGCGGCGGCGGGGGCGGCAGCACGGCGACGTCGACACACGACCACGACGCCAACATCGGCAGCAGCGG
CGCCATCTCGGCCGCCGAGCCGTTCGTCGACCAGCAGCATCAGCATCAGCAT------CAGCAGGCCAAGAACTACGCCT
TCGCCGACTGGATGCCGGCCACTGCGGCGGCGGCGGCGCCGGGGCCGGAGAGCTACTCCATGTCCGCGCACTGGCCGGCC
TCCACGGCCAGCTCCGGCAACGTGACGCCGTCGCACGGCGCGTTCGTCGGCGACCAGATGAGCGGCAGCAGCTACGCCGC
GCTGCAGCACCCGCACCAGCACCACCACCAGCAGCAGGAACACCACCACCACCAGAGCGCGGTCA---------------
---CCGCCGCGGGCGC------------CGCCGGAATGGTCGCCGGAGGCGGCTACTTCGACCTGCTCAACATGGGGGAC
ATCTACGGCGGGTTCACCACGACGAACGACGATTTGCTCTTCTGAAAATTCAGAGTT-AAATTCTGATGCCGTGACCATG
--------TGTGTGATACAAAAACAATGTTGTGTGTGTTCATGTTGTGTATGAAAA-TGGAAAGAGGT-GGTACACCGCT
TGATTAATTTGATT-----------------------------ATCATATTCATTAGAGGAAA--------TAGGCTGGA
CATAATTCTTTCATTGTTGTATTTTTCGCAAT-AAAAAGGCGTATCTATTTGTATCGTGTAAAAGTGCAAATGTGAGCTT
AATTGGATTAGATTTTGTAACTTC-AGCAAATATTTAATTGGGGAGTAGTCATGTAACAAGTTGTGATTTTTTTTTTTTG
AGGCGATGTGATATTGAACCACACTTGTCTCTTTGATTAGCAGAATTCTCAATTCGTACGAGGGAGAAATGTGTCATGCT
ATCTTAATTTTGAGATCAAAATCATGCTAGTGTTTCCGAAAAGCATAGAAAAAAAAATCTTTAGAAGAACGTTAGGTCAG
------------------------------TTGAAACTTTTC-----------TTAGAATGAAGAAATCAACTGACAAAC
TGTCTTATTTACAGCGTCCCTACAAATCAAACAGCCACCTACAAGAATTCCTACTCCAAAAAGCGTTCAAATTTCATTTC
AATCATATAGGCCATTTACGGTTCGTTTCCAGATAAAATGTTTCACAAACTGCATCCTTCATTCATCAGTAAAGGTTTGG
CAAAACGTCGCTTGCAACAAACAGGAAACGAAT----------TCATTGCTGCTCCAAGAGATCTTGCATCCAAAGAATT
TGGATTA-T-CTCAGTGGAGTTGATG-AGAGAAAGCAGTAATAAAACACCAACCTTACATAGTTGTCCATGTCCATTCTA
A---AGTAATCATTACATAGATGTTGCAAAACTGAGAGACCTTACATACTTAA-----------ATTCTCGCCAAAGGAG
AGGTA-----AGATAGCACTCTGGTTTTCTCGTTACATATAATGCGAAACTACAAAGCCATGGATGACAAGGGGAACAGA
AGGGCAAAAAGGA-ACTTAATTCTTCTTGCGAGAAAAGTGGTTGTCGTTCGGATTCCGCTTCCCGCTGAACATTGCGAGC
GCCTTCCTTACTGGAGGTTTCAGCTCCACTTTCTTCTCGCCGCT
>SNPs
----------------------------------S--------------------------------------------S
S-------------------------------------------------------------------------------
---------------------------------S-----------------------------------SS---------
-------------S------S-------S-------------------------SS----------------------S-
-----------------------------------------S--------S-----------------------------
-------------S------S----S------------------------------------------------------
--------------------------------------------------------------------------------
--------------S---------------------------------S----------------S-----S--------
--------------------------------------------------------------------------------
-----------------S----------S---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S---------S-
--------------------------------------------------------------------------------
---------S------------S-----S---------------------------------------------------
-----SSS-----S------------------------------------S----------SS-S-S--------S---S
-S------S---S------------------S-------SSSS---SSSSSS----------------------------
------------------------------------------------------------------------S--S----
----------------S--------S------------S-------SSSS--S--------S--S--S----SS------
-------------------S------S-----------------S------------------------S----------
---------S-----------------------S-S-S----------SS--------------------S---------
--------------------------S--S--------------------------S-----------------------
-S-----------S-----------------------------------------------------------S-----S
--------S-SSSSSSSS---------S---------------------------SSSSSSSSSS---------------
------------------------------------------S----------S----SS--------------------
-------------------------------------------------------------S-----S-----------S
--------------------------------------S-----------------------------------------
------------S-S-----S----------S----S------SS------S-S---S----------------------
-------S--S---------------S----S-------------S--S-SSS-SSS-SSS-S-----------------
S-----S-------------S---------S--------S--SS------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------S------------
-----------------------S--------------------------------------------------------
---------------S----------------------------------------------------------S-----
-------------------------S----S-S--S--S-----------------------------------------
-----------------------------------------S--------------------------------------
--------------------------------------------------------------------------------
------SS-----------S---S--------------------------------------------------------
--------S-------S----------------S-----------------------S----------------------
---------------S-S-S----SS----S-S--------------S----------------------------S---
--------------------------------------------------------------------------------
------------S------------------------------------------------------------------S
-----------------------------------S--S--S--S---SS------------------------------
--------------------------SSS---S----------------------------------------------S
-----------------------------------------------------SS-SS--SS--SSSSS-S---SSS---
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------S-S----S--S-----S------S----------S--
---------------------------------------------------------S---S--S-SSS-----SSSSS-
SS-SSS--------------------------------------------------------------------------
----SS--S--S--S------------SSS---SSSSSSSSSS---S--------------S-----------------S
----S-SSSS-----------------------S----------------------S---------S-------------
-----------------S--------S---------S----------------S---------S----------------
-----------------------S--------------------S--S---------S----------------------
--------------------------------------------------------------------------------
-----------------------------S--------------
>forward_261
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-GCCATTGTGCCAACTCAGTC-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------
>reverse_2241
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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GGTTTTCCATGGCGCTGATG------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------
>forward_1356
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------ACTACATCCTCAAGCACGGC----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>reverse_2762
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------CTTCGTCGGGGACCAGATG--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>forward_2271
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------GTTTTCCATGGCGCTGATGG-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>reverse_3803
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------CTCAGTGCTGCTCCAAGAGT------------------
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--------------------------------------------
