>input_sequence_43686
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-----------------------------------------------------------AGCAAGCCGACCGAGAGCAGA
GCC-----ACCAAAGGCAGCGCAGCGCTAGCGTCTTGGCCGGGTCCATTTCTTCGACAGACCAACCAAACGCTCTCGCAG
GACACGCACGGCCGCACCGCATGTCGTGGTCTGACACGGACGCGGCGCTCTTCGCGGCCGTCCTGGGCCACGACGCCGCG
CGCCACCTGGCCACCACGCCGCCGCACCTCGACGGCCCGGCCTCGTCGTCGCCCGAGCTGCAGGCGCGCCTGTACGACCT
CGTCGAGCGGGGAGGAGCCTGGACCTACGGCATCTACTGGCAGGAGTCCCGGGCCGGCGCCG------------TGCTCG
GCTGGGGCGACGGGCACTGCCGCGACGGCCCGGCCGAGCAAGCCGGGGCCGCGGACAGGAGCCTGGCGCGTAAGCGCGCG
CTGTTGCGGCTCCACGCGCTGTATGGCGGCGGGGACGAGGACGGCGCCGACTACGCGCTCCGCCTCGACCGGGTCACTGG
CGTTGAGATGTACTTCCTGGCGTCCATGTACTTCTCTTTCCGCGAGGACGCCGGCGGGCCGGGCCGCGCGCTCACCTCCG
GCCACCACGCCTGGGCCGCCGTCGATCCCCACCTGCCCGGCTCA---------CCCGGGTGGTACGTCCGTGCGTCCCTC
GCCCAGTCCGCCGGCTTACGCACCGTCGTCTTCCTCCCTTGCAAGGGCGGCGTCCTTGAGCTCGGTTCCGCCGTGGCCAT
GCGCGAGAACCCCGAGGTCCTGCGCGCCATCCAATCTGTCTTCCACGTCGAGGCCGTCGCGCCGGACGATCGCATGAGGA
TCTTCGGGAAGGACGTTTCCCGCAGCCCCCCATTGCCGCCGGTGCAAACCACGGGGAGCGACGCCAGTTGGGCGCTGCGG
CTCGGCGGGCAAGCCATGGTGGCGCGCCCGACCAAGCAGGAGGCGGCGGC---AGTCAAACCGAAACCCCAGCAGGAGCC
TCCCAAGAGCATAAGCTTCAG---------CGACGCGCAGAAGCAGGCGGGCGGCGAGGAGCGGAGGCCGCGGAAGCGGG
GGCGCAAGCCGGCGAACGGGCGGGAGGAGCCCCTGAACCACGTGGAGGCGGAGCGGCAGCGGCGGGAGAAGCTGAACCAG
CGGTTCTACGCGCTGCGCGCGGTGGTGCCCAAGATCTCCAAGATGGACAAGGCGTCGCTGCTGAGCGACGCCATCGCGTA
CATCCAGGAGCTGGAGGAGCGCCTCCGGGGCGGCGCGGCGGGGCCGGCGCCGGCGCGGGCGGAGGCCGGCCCGTCCGTGG
AGGTGAAGGCAATGCAGGACGAGGTGGTGCTGCGCGTCAGCACCCCCCTGGACGCGCACCCCATCTCCGGGGCGCTGAGC
GCCATGCGGGACTCCCAGCTGAGCGTGGTGGCGTCGAGCATGGCGGTGGCGGACGACACCGTCACGCACAAGCTCGTGGT
GCGGTCGGCGGGCCCCGAGCGGCTCACGGCCGAGACCGTGCTGGCCGCGATTTCCCGTGGGGTGATGATGAGCGCCACCC
CCTCCCCGTGACCATGCAGCTGTAACAATCGCGCGGC------------------AGGCAACTGTCAACCGTTAGGGTAA
GTTTAGGTGAGCATGCTCCTCGTGACTGCATGC-----------------CACGTGGCGCGCAGGAGGAAGGTGAAACT-
---------------------------CCTTTCCTCGAGTGGCAGTATCCCAGATTGCCAGTGGT--------AGATTCA
TGTAGTGCACCTGGTTATCAATTTGCACCC---AGTAC-ACAGTAGATCAAATCTACGGAAAATTGTTATGTATAGGAAG
ATGC---AGTAATTCTCAGCCT-TGTGGATGACTC---------------------------------------------
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----
>chr3D_1_TraesCS3D01G253700
TCTCCCTTTCACGCGCACATGCAC----AGACAGCGGAAGCGGTTGCTGCAGACACACACGTCTCTGTGTGAAAACGTCG
CGTGTTCCCTTGAGCTC------------CGTGCGTGCGTGCGTGCTCGATTTGCTCCTAT-----TATCGTTTTCTTTC
CGGGCTGCAGATGAAATGAAGGCGGATCAAACATGATGCTCGCTGTCTCAGCGTGTGGGCATGGTCCAGAGC----AG--
---TTGCCAACGTACCGAACTAGTCCCAGCCGTGTAGCAGCAATGTTTGGCTATTTTGGCTAGTCATTAACCAACCGTCT
TCAGCTCCTGGGTT----AACTTGGGAACCTAG----AATTTTGGAGCTAA-----------------------------
--------------------------------------------------------------------------------
-------TATGAGATATCTGCGACGAAACCGCGTACTACGCGCTCTGCGTTTGCCGTGTCATTTTTGGTGCGT----GCG
C---GCGTGCACCGAGTTCCATTTTGCGTGCGGTTTGCGCCCTCTTCTGCCCAGCTCTCCCCAAATCATTACTCGCCGGC
CCGACCATC----------------------------AAAAGGCACCGTCCGTATATACACCGAACTTGTGCAAATGATC
CATCCGATGTGGCCGAACAAAGGTAC--GCGATGCATGCATGTAGC----AGCA-CAGGCAGCAGGTTCTCGGCATCTAG
AACA-----------------CCCTACTCCCGATTCCGACA-----TAGTACA---------------------------
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-------------TGAAATCTTCACTCGCTGCTC---------AGTACTGCATGCATTGCCAACATGATTCACGTGACAC
GGCAACCAGTGCGCTCTCGGGGCAAATCGTCCCCCGTCCCGGTGCGCCGAATCCACCTGGCTCCCGTA----CCTTCCTT
CCTTGTCGTACGGCCGCGTCTCGTTTTTAACGGGGGCGCATCCACTCCACAGACCACAGC----ACAGTTATTACTTGTA
GTAG---TAGCTTGTAGTCCAGTGACCAACGCACTCGCGACGAGTCTCTCGCAACCC-----------------------
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----------------------------AGAAAATCAACTTCTTGGCGCACGTGAGCTTCCGCTGTCATATCCAGCTCCA
GGGCCGGGAA------CCGGCTCGGCTCTATATAAAACCA----CAGACCGTGAAAACCAGCAAGCCGACCGAGAGCAGA
GCC-----ACCAAAGGCAGCGCAGCGCTAGCGTCTTGGCCGGGTCCATTTCTTCGACAGACCAACCAAACGCTCTCGCAG
GACACGCACGGCCGCACCGCATGTCGTGGTCTGACACGGACGCGGCGCTCTTCGCGGCCGTCCTGGGCCACGACGCCGCG
CGCCACCTGGCCACCACGCCGCCGCACCTCGACGGCCCGGCCTCGTCGTCGCCCGAGCTGCAGGCGCGCCTGTACGACCT
CGTCGAGCGGGGAGGAGCCTGGACCTACGGCATCTACTGGCAGGAGTCCCGGGCCGGCGCCG------------TGCTCG
GCTGGGGCGACGGGCACTGCCGCGACGGCCCGGCCGAGCAAGCCGGGGCCGCGGACAGGAGCCTGGCGCGTAAGCGCGCG
CTGTTGCGGCTCCACGCGCTGTATGGCGGCGGGGACGAGGACGGCGCCGACTACGCGCTCCGCCTCGACCGGGTCACTGG
CGTTGAGATGTACTTCCTGGCGTCCATGTACTTCTCTTTCCGCGAGGACGCCGGCGGGCCGGGCCGCGCGCTCACCTCCG
GCCACCACGCCTGGGCCGCCGTCGATCCCCACCTGCCCGGCTCA---------CCCGGGTGGTACGTCCGTGCGTCCCTC
GCCCAGTCCGCCGGCTTACGCACCGTCGTCTTCCTCCCTTGCAAGGGCGGCGTCCTTGAGCTCGGTTCCGCCGTGGCCAT
GCGCGAGAACCCCGAGGTCCTGCGCGCCATCCAATCTGTCTTCCACGTCGAGGCCGTCGCGCCGGACGATCGCATGAGGA
TCTTCGGGAAGGACGTTTCCCGCAGCCCCCCATTGCCGCCGGTGCAAACCACGGGGAGCGACGCCAGTTGGGCGCTGCGG
CTCGGCGGGCAAGCCATGGTGGCGCGCCCGACCAAGCAGGAGGCGGCGGC---AGTCAAACCGAAACCCCAGCAGGAGCC
TCCCAAGAGCATAAGCTTCAG---------CGACGCGCAGAAGCAGGCGGGCGGCGAGGAGCGGAGGCCGCGGAAGCGGG
GGCGCAAGCCGGCGAACGGGCGGGAGGAGCCCCTGAACCACGTGGAGGCGGAGCGGCAGCGGCGGGAGAAGCTGAACCAG
CGGTTCTACGCGCTGCGCGCGGTGGTGCCCAAGATCTCCAAGATGGACAAGGCGTCGCTGCTGAGCGACGCCATCGCGTA
CATCCAGGAGCTGGAGGAGCGCCTCCGGGGCGGCGCGGCGGGGCCGGCGCCGGCGCGGGCGGAGGCCGGCCCGTCCGTGG
AGGTGAAGGCAATGCAGGACGAGGTGGTGCTGCGCGTCAGCACCCCCCTGGACGCGCACCCCATCTCCGGGGCGCTGAGC
GCCATGCGGGACTCCCAGCTGAGCGTGGTGGCGTCGAGCATGGCGGTGGCGGACGACACCGTCACGCACAAGCTCGTGGT
GCGGTCGGCGGGCCCCGAGCGGCTCACGGCCGAGACCGTGCTGGCCGCGATTTCCCGTGGGGTGATGATGAGCGCCACCC
CCTCCCCGTGACCATGCAGCTGTAACAATCGCGCGGC------------------AGGCAACTGTCAACCGTTAGGGTAA
GTTTAGGTGAGCATGCTCCTCGTGACTGCATGC-----------------CACGTGGCGCGCAGGAGGAAGGTGAAACT-
---------------------------CCTTTCCTCGAGTGGCAGTATCCCAGATTGCCAGTGGT--------AGATTCA
TGTAGTGCACCTGGTTATCAATTTGCACCC---AGTAC-ACAGTAGATCAAATCTACGGAAAATTGTTATGTATAGGAAG
ATGC---AGTAATTCTCAGCCT-TGTGGATGACTCCGTGTTTCTTTGGAGAAGAGACCGTGGAATTTGAGCGCGTCGTGC
GTGGCGGTGGGGGTTTACTTTGACCGACCGCACGCGCTCTCTCCGTTTCAGATCTCCACCTACACCCGCTGGACTGAAAG
TTTTCTTCGTCGGGTCGTCGTCGACGTCTCTCTCGCGCGGGCGCG-----------------------------------
---AAAACCGCCGTCCCGCGTCTGGACTTGACAGTCGCCGGCCCGCACCGCGTCTTCGCGTGACGCCGCACGCGCGTTGC
--------TTGCGACTTTGTGACAACTTCTCTTGCGGCGCGTGACCACGGGACTCGCCTCTCGCCTCGCCGCCTCTGGTA
GCCCGGCCGG----TGTCGTCGCATCGTATGACCGCAACCCAACAACCGGGGCTCGTGTCGTGTGCACGCCTCCGATCGG
CTCGGGTA--CTCGTGTCGTGCACGGTTGATGGAGATGTAAGATGTAACCGGTGGTCCGGAGGCAGGCGGTGTGTCAG--
--CTGCAGGGCGCGCGCGCCCGGCCA----ATGGGACCGACGTTACGCGCCAACAACCTTAAACAGCAACCCTTTCAGCT
CAGGACTTGATGATGTGCCGTGGCACCACGGCTGGCTCATCTCGCTGCGCCTTTTCGTGAACTCACTCG----CCCATGC
TCCGACGCGCGTCACGCTTTAATCAAGTTACAATCAGT------------------------------------------
-------CGAGGTCGCGAAATCTTAATCACCAGCTCCCATCCAGTGCCATTAAGAAGTA------ACTAAAAGCACGGTG
GCGGCAGCAGTGATCG----------------------------------------------------------------
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-------------------------------TCTGGTCGTGAAATCTCGATGCAACTTTTATAATATTTGAGATGCCTTG
TCTTTAATAACCTAGTGCCAGATCGATTGAATTTGTTG--------------------------TAGAAAAAAGAGTTGT
CGTGATAAACTTTTATA-TAGATCTGATT-TTTTCATAAGAAAAAAG-ACTGCTAATGCTTCACCGTGTAAAGAGTGGGG
GCTATGGAGCCAACTGATTTGATTACTCAACT-AGCTCACTAA-----AACAAAACAAAAAAGCTCTTCAACTATACAAT
TATG
>chr3B_1
TCTCTCTTTCACGCGCACATGCAC----AGACAGCGGAAGCGGTTGCTGCAG--ACACACGTCTCTGTGTGAAAACGTCG
CGTGTTCCCTTGAGCTT------------CGTGCGTGCGTGCGTGCTCGATTTGCTCCTAT-----TATCGTTTTCTTTC
CGGGCTGCAGATGAAATGAAGGCGGATCAAACATGATGCTCGCTGTCTCAGCGTGCGGGCATGGTCCAGAGC----AGAG
CAGTTGCCAACGTACCCAACTACTCCCAGCCGTGTAGCAGCAATGTTTGGCTATTTTGGCTAGTCATTAACCAACCGTCT
TCAGCTCCTGGGTTGGTTAACTTGGGAACCTAGCTAGAATTTTGGAGCTAA-----------------------------
--------------------------------------------------------------------------------
-------TATGAGCTATCTGCGACGAAACCGCGTACTACGCGCTCTGCGTTTGCCGTGTCATTTTTGGTGCGTGCGTGCG
T---GCGTGCACCGAGTCCCATTTTGCGTGCGGTTTGCGCCCTCTTCTACCCAGCTCTCTCCAAATCATTACTCGCCGGC
CCGACCATC----------------------------AAAAGGCACCGTCCGTATATACACCGAACTGCTCAAAACGGTT
CATCTGATGTAGTCGAACAAAAGGTACGGGGATGCATGCATGTCGC----AGCA-----CAGCAGGTTCTCGGCATCTAG
AACAGATTGTCTGACAGCTCACCCTACTCCCGATTCCCACGTACAGCACCATCGCAAAAATGCTATACATACAAAAACTT
ACACGCTTTTACATGCTCCTTTCATCTAACAATCAATCACAAACCTCTCCTCCCTGATTTTCAGGAGTGGACCGCCCCGC
TCACCTATTGACCAATCAAGATTAACCATCTTGTAAAAACTGTAAATCGTTTGTACGTGTAGCATTGCCGGCACCATCGC
ATCGTGTGGATCCTGACATCTTCACTCGCTGCTC---------AGTACTGCATGCATTGCCAACATGATTCACGTGACAC
GGCACCAGT---GCTCTCTCGGCAAATCGTCCCCCGTCCCGGTGCGCCGAACCCATCTGGCTCCCGTA----CCTTCCTT
CCTTGTCGTACGGCCGCGTCTCGTTTTTAACGGGGGCGCATCCACTCAACAGTCCACAGC----ACAGTTATTACTTGTA
GCTTGTAGA-CTTGTAGTCCAGTGACCAACTG------------------------------------------------
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----------------------------AGAAAATCAACTTCTTCGCGCACGTGAGCTTCCTCTGTCATA------TCCA
GGGCTGGAAGCTGGCTCCGGCTCGGCTCTATATAAAACCA----CAAACTGTGAAA-CCACCAAGCCGACCGAGAGCATA
GCGACCTTACCAAAGGCAGCGCAGCGCTAGCTTGTTGGCCGGGTCCATTTCTTCGACAGACCAAC-----GCTCTCGCAG
GACACGCACGGCTGCACCGCATGTCGTGGTCTGACACGGACGCGGCGCTCTTCGCGGCCGTCCTGGGCCACGACGCCGCG
CGCCACCTGGCCACCACGCCGCCGCACCTCGACGGCCCGGCCTCCTCGTCGCCCGAGCTCCAGGCGCGCCTCTGCGACCT
CGTCGAGCGGGGAGGAGCCTGGACCTACGGCATCTACTGGCAGGAGTCCCGCGCCGGCGCCGGCGGCCGCCCCGTGCTCG
GCTGGGGCGACGGGCACTGCCGCGATGGCCCGGCCGAGGAAGCCCGGGTCACGGACAGGAGCCTGGCGCGCAAGCGCGCG
CTGCTGCGGCTGCACGCGCTGTATGGCGGCGGGGACGACGATGGCGCCGACTACGCGCTCCGGCTAGACCGGGTCACTGG
CGTCGAGATGTACTTCCTGGCGTCCATGTACTTCTCGTTCCACGAGGACGCCGGCGGGCCGGGCCGCGCGCTAACCTCCG
GCCACCACGCCTGGGCCACCGTCGATCCCCACCTGCCCGGCTCTGCGGCCGCTCCCGGGTGGTACGTCCGTGCGTCCCTC
GCCCAGTCCGCCGGCTTACGCACCATCGTCTTCCTCCCTTGCAAGGGCGGCGTCCTTGAGCTCGGTTCCGCCGTGGCCAT
GTGCGAGAACCCCGAGGTCCTGCGCGCCATCCAATCTGCCTTCCACGTCGAGGCCGTCGCGCCGGACGATCGCATGAGGA
TCTTCGGGAAGGACGTCTCCCGCAGCCCCCCATTGCCGCCGGTGCAAACCACGGGGAGCGACGCCAGTTGGGCGCTGCGG
CTCGGCGGGCAAGCCATGGTGGCGACTCCGGCCAAGCAGGAGGTGGCGGC---AGTCAAACCGAAACCCCAGCAGGAGCC
TCCCAAGACCATAAGCTTCAGCAAGGCTGTCGACGCACAGAAGCAGGCGGGCGGCGAGGAGCGGAGGCCGCGGAAGCGGG
GGCGCAAGCCGGCGAACGGGCGGGAGGAGCCCCTGAACCACGTGGAGGCGGAGCGGCAGCGGCGGGAGAAGCTGAACCAG
CGGTTCTACGCGCTGCGCGCGGTGGTGCCCAAGATCTCCAAGATGGACAAGGCGTCGCTGCTGAGCGACGCCATCGCGTA
CATCCAGGAGCTGGAGGAGCGGCTCCGGGGCGGCGCGGCGGGGCCGGCGCCGGCGCGGGCGGAGACCGGCCCGTCCGTGG
AGGTGAAGACAATGCAGGACGAGGTGGTGCTGCGCGTGAGCACCCCCCTCGAGGCGCACCCCATCTCCGGGGCGCTGAGC
GCCATGCGGGACTCCCAGCTGAGTGTGGTGGCGTCGAGCATGGCGGTGGCCGACGACACCGTCACGCACACGCTCGTGGT
GCGGTCGGCGGGGCCCGAGCGGCTCACGGCCGAGACCGTGCTCGCCGCGATTTCCCGTGGGATGATGATGAGCGCCACCC
CCTCCCCGTGACCGTGCAGCTGTAACAATCGCGCGGCTCGTGCCGTAGTACGTACAGGCAACTGTCAACCGTTAGTGTAA
GTTTAGATGAGCATGCTCCTCGTGACTGCATGC-----------------CACGTGGCGCGCAGGAGAAAGGTGAAACT-
---------------------------CCTTTCCTCAAGTGGCAGTATCCCAGATTGCCAGTGGT--------AGATTCA
TGTAGTGCACCTGGTTATCAATTTGCACCC---AGTACAACAGTAGATCAAATCTACGCAAAATTGTTATGTATAGGAAG
ATGA---AGTAATTCTCAGCCTTTGTGGATGACTCCGTGTTTCTTTGAAGAAGAGACCGTGGAGTTTGAGCGCGTCATAC
GTGGCGGTGGGGGTTTATTTTGACCGACCGCACGCGCTCTCTCCGTTTCAGATCTCCACCTACACCCGCTGGACTGAAAG
TTTTCCTCGTCGGGTCGT---------------CGCGCGGGCGCGAAAACCGCCGGT-----------------------
---------------CCGCGTCTGGACTTGACAGTCGTCGGCCCGCACCGCGTCCTCGCGTGACGCCGCACGCGCGTTGC
--------TTGCGACTTTGTGAGAACTCCTCTTGCGGCGCGTGACCACGGGACTCGCCTG-------GCCACCTCTGGTA
GC----CCGG----TGTCGTCGCAT-------------------------------------GTACACGCCTCCGATCGA
CTCGGGTC---------CGTGCACGGTTGATGGAGATGTAA-------CCGGTGGTCCGGAGGCAGGCGGTGTGTCAG--
--CTGCAGGGCGCGCGCACCCGGCCAATGGATGGGACCGACGTTACGCGCCAACAACCTTAAACAGCAACCCTTTCAGTT
CAGGACC---TGATGTGCCATGGCACCACGGCTGGCTCATCTCGCCTCGCCTTTTCGTGAACTCACT-------------
--CGACGCGCGTCACGCTTTAATCAAGTTACAATCAGT------------------------------------------
-------CGAAGTCGCGAAATCTTAATCACCAACTCCCATCCAGTGCCATTAAGAAGTA---------------------
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----
>chr3B_1
TCTCCCTTTCACGCGCACATGCAA----AGACAGCGGAAGCGGTTGCTGCAG--ACACACGTCTCTGTGTGAAAACGTCG
CGTGTTCCCTTGAGCTC----------------CGTGCGTGCGTGCTCGATTTGCTCCTAT-----TATCGTTTTCTTTC
CGGGCCGCAGATGAAATGAAGGCGGATCAAACATGATGCTCGCTGTCTCAGCGTGCGGGCATGGTCCAGAGCGAGCAG--
---TTGCCAACGTACCGAACTAGTCCCAGCCGTGTAGCAGCAATGTTTGGCTATTTTGGCTAGTCATTAACCAACCGTCT
TCAGCTCCTGGGTT----AACTTGGGAACCTAG----AATTTTGGAGCTAATACTTCCTCCGTCCGGAAAAACTTGTCCC
TCAAATGAATGTATCTAGCACCAAGTTAGTGCTAGATACATCTATTTGAAGAACAAGCTTAGGACAAGTTTTCTCGGACG
GGGGGAGTATGAGATATCCGCGACGAAACCGCGTACTAGGAGCTCTGCGTTTGCCGTGTCATTTTTGGTGCGTGCGTGCG
TGCAGCGTGCACCGAGTTCCATTTTGCGTGCGGTTTGCGCCCTCTTCTGCCCAGCTCTCCCCAAATCATTACTCGCCGGC
CCGACCATCAAAAGGCACCGTTCGTTCCCTCAAAAAAAAAAGGCACCGTCCGTATATACACCGAACTTGTGCAAATGATC
CATCCGATGTGGCCGAACAAAGGTAC--GCGATGCATGCATGTAGCAGCGAGCA-CAGGCAGCAGGTTCTCGGCATCTAG
AACAGATTGACTGACAGCTCACCCTACTCCCGATTCCGACATACAGTAGTACA---------------------------
--------------------------------------------------------------------------------
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-------------TGAAATCTTCACTCACTCGCTGCTCAGTAGAGTACTGCATGCATTAGCAACATGATTCACGTGACAC
GGCAAGCAGTGCGCTCTCGGGGCAAATCCTCCCCCGTCCCGGTGCGCCGAATCCACCTGGCTCCCGTACCTTCCTTCCTT
CCTTGTCGTACGGCCGCGTCTCGTTTTTAACGGGGGCGCATCCACTCCACAGACCACAGC----ACAGTTATTACTTGTA
GTAGTAGTAGCTTGTAGTCCAGTGACCAACGCACTCGCGACGAGTCTCTCGCAACCGAGTGAGGTCTGAAATAAACCCTG
AGGTTGTAGAAGCCGACGTAAATGAACCCTTACCTCTAAATCCCTGAAGTTTGTACCCCGTATTTACAGATCCCAGCCAA
TTCACACCTTGTATGAGTAAAATCCTGTTTGCTGAAATAGGAAAGGCGCAATCCCAGCCGGGATTCATTTTTACTGCCGC
TTACTGCATGGGCCCATCTGTCATATGCATCTCCTCCCCCAATCTCCTCAATACCAACTGCAAGGAGGCGCGGCTGCACT
AGAGTTCAAGGTGTTCGATCTGCTCCCAGAAAATGACCTACTTTCCTTGGGCACCGTTCTGAGCACCATGGCCGTGCACA
GCCGATGGATCGATTCTAGCCGCCGGCTAATCGATGTGTTCAAGTACACAAAAGAAACAAACGGACGTCGAGAAAAAAGG
CGAAGCTCGTACTCGGCCTTTGACGCCTCCTCCGACTTGACGTGCCCGTGCGGCATCGTCAGTAGCTGTCAGAAGACCCC
TGCAACGTCCAGGAAGCAGCCACCGTGAGCGCGAGCAGCTGCTTCTCATCCGGCCCGTCCGCGCGCCTCTGAAGCTCCTC
ATCCGGCCCGTCCAGTTCGTGGACGGCGTCGACAACTGCGGTGGCGTGGGTACCGCCGGCGGTGTCATGAGCGGCTTGGT
TGTCCCTGAACTTCGTGAGGCGTGAGGCTTGGTCGGCGAAGTGGGCCTAGACCACCAAACGCCGTCGTACTGCTAGTGCC
ACTCGCCGGCACAGCGCCGCGTACTGCCGCGGCTGGAGATGCTCCCCGCCACAAGCAGCCGCTGCCCTCGCTGGCCAACA
CCATGTACTGCTGCAGCTGCACGCCGCCGCATACTGCTACTGCTTTGTGCTCTCGCCGCCAATGCCCACATAGGAAGAGC
AAATTCTCACCGTTGTACCTTGTGTTGTGCTCTCGCGCCGCATATTTGCTACTGCTTGTGCTCATGTCGTCCTTGTTGTG
CTATGTGCAAAATAATCAGCATGGGCGCATGGCCCGCCCGTTCTCCAGCACGAGGTTGGCTCGTACAAGAACGGCGCCAT
ATATATTGCCTGTCTGACTCTACGTCTGGGGTCGTCGTCCGGTGGCTGCCATCTTGTGCTGCTCTCCTCTGCTCAAGCTA
GTCATGGTGAGATGGGAACTAGGAAAAATGGCTATGATGTGTTGACCCACACCACAGTGAGAAAAGCGAGTACCCGGCCA
GGATTATGTTTTTCCCGGTCTACCAAACATATCTAAGGTTCGGATAAACCGGGATGAGAAAGGTTAGGGTACAGATTTCA
GGGATTTGGAGGTGAGGGTTCATTTGCGTCGACCTCTACAACCTTAAGATTCATTTTAGACTTCACTCCTCGCAACCCAG
AAAATCAACTTCTTTTTTTTTAGGGTAC-GAAAATCAACTTCTTGGCGCACGTGAGCTTCCGCTGTCATATCCAGCTCCA
GGGCCGGAAG------CCGGCTCGGCTCTATATAAAACCA----CAGA----------CAGCAAGCCGACCGAGAGCAGA
GCC-----ACCAAAGGCAGCGCAGCGCTAGCGTCTT-GCCGGGTCCATTTCTTCGACAGACCAACCAAACGCTCTCGCAG
GACACGCACGGCCGCACCGCATGTCGTGGTCTGACACGGACGCGGCGCTCTTCGCGGCCGTCCTGGGCCACGACGCCGCG
CGCCACCTGGCCACCACGCCGCCGCACCTCGACGGCCCGGCCTCGTCGTCGCCCGAGCTGCAGGCGCGCCTGTACGACCT
CGTCGAGCGGGGAGGAGCCTGGACCTACGGCATCTACTGGCAGGAGTCCCGGGCCGGCGCCGGC---------GTGCTCG
GCTGGGGCGACGGGCACTGCCGCGACGGCCCGGCCGAGCAAGCCGGGGCCACGGACAGGAGCCTGGCGCGTAAGCGCGCG
CTGCTGCGGCTCCACGCGCTGTATGGCGGCGGGGACGAGGACGGCGCCGACTACGCGCTCCGCCTCGACCGGGTCACTGG
CGTCGAGATGTACTTCCTGGCGTCCATGTACTTCTCGTTCCGCGAGGACGCCGGCGGGCCGGGCCGCGCGCTCACCTCCG
GCCACCACGCCTGGGCCGCCGTCGATCCCCACCTGCCCGGCTCA---------CCCGGGTGGTACGTCCGTGCGTCCCTC
GCCCAGTCCGCCGGCTTACGCACCGTCGTCTTCCTCCCTTGCAAGGGCGGCGTCCTTGAGCTCGGTTCCGCCGTGGCCAT
GCGCGAGAACCCCGAGGTCCTGCGCGCCATCCAATCTGCCTTCCACGTCGAGTCCGCCTCGCCGGACGATCACATGAGGA
TCTTCGGGAAGGACGTCTCCCGCGGCTCCCCAATGCCGCCAGCGCAAACCACGGGGAGCGACGCCAGTTGGGCGCTGCGG
C-------------------------------CAAGCAGGAGGTGGCGGCGGTAGTCAAACCGAAACCCCAGCAGGAGCC
TCCCAAGACCATAAGCTTCAGCAACGCCGTCGACGCGCAGAAGCAGGCGGGCGGCGAGGAGCGGAGGCCGCGGAAGCGGG
GGCGCAAGCCGGCGAACGGGCGGGAGGAGCCCCTGAACCACGTGGAGGCGGAGCGGCAGCGGCGGGAGAAGCTGAACCAG
CGGTTCTACGCGCTGCGCGCGGTGGTGCCCAAGATCTCCAAGATGGACAAGGCGTCGCTGCTGAGCGACGCCATCGCGTA
CATCCCGGAGCTAGAGGAGCGCCTCCGGGGCGGCGCGGCGGGGCCGGCGCCGGCGCGGGCGGAGGCCGGCCCGTCCGTGG
AGGTGAAGGCAATGCAGGACGAGGTGGTGCTGCGCGTGAGCACCCCCCTGGACGCGCACCCCATCTCCGGGGCGCTGAGC
GCCATGCGGGACTCCCAGCTGAGCGTGGTGGCGTCGAGCATGGCGGTGGCGGACGACACCGTCACGCACACGCTCGTGGT
GCGGTCGGCGGGCGCCGACCGGCTCACGGCCGAGACCGTGCTGGCCGCGATTTCCCGTGGGGTGATGATGAGCGCCACCC
CCTCCCCGTGACCGTGCAGCTGTAACAATCGCGCGGCTCGTGCCGTGGTACGTACGGGCAACTGTCAACTGTTAGTGTAA
GTTTAGGTGA-----------------GCATGC-----------------CACGTGGCGCGCAGGAGGAAGGTGAAACT-
---------------------------CCTTTCCTCAAGTGGCGGTATCCCAGATTGCCAGTGATAGT-----AGATTCA
TGTAGTGCACTGGTT-----------------------------------------------------------------
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----
>chr3A_1
TCTCCCTTTCACGCGCACATGCACAGACAGACAGCGGAAGCGGTTGCTGGAG--ACACACGTCTCTGTGTGAAAACGTCG
CGTGTTCCCTTGAGCTCTGTGCGTGCGTGCGCGCGTGCGTGCGTGCTCGATTTGTTCCTATTGGAGTATCGTTTTCTTTC
CGGGCTGCAGATGAAA---------------------------TGTCTCAGCGTGCGGGCATGGTCCAGAGC----AG--
---TTGCCAACGTACCGAACTAGTCCCAGCCGTGTAGCAGCAATGTTTGGCTATTTTGGCTAGTCATTAACCAACCGTCT
TGAGCTCCTGGGTT----AACTTGGGAACCTAG----AATTTTGGAGCTAA-----------------------------
--------------------------------------------------------------------------------
-------TATGAGCTATCTGCGACGAAACCGCGTACTAGGCGCTCTGCGTTTGCCGTGTCATTTTTGGTGCGTGCGTGCG
T-------GCACCGAGTTCCATTTTGCGTGCGGTTTGCGCCCTCTTGTGCCCAGCTCTCCCCAAATCATTACTGGCCGGC
CCGACCATC----------------------------AAAAGGCACCGTCCGTATATACACCGAACTTGTGCAAATGATC
CATCCGATGTGGCCGAACAAAGGTAC--GCGATGCATGCATGTAGCAGCACATTGCAGGCAGCAGGTTCTCGGCATCTAG
AACAGATTGACTGACAGCTCACCCTACTCCCGATTCCGACATAC--TAGTACA---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------TGAAATCTTCACTCGCTGCTC---------AGTACTGCATGCATTGCCAACATGATTCACGTGACAC
GGCGGCCAGTGCGCTCTCGGGGCAAC----------------------------------------------CCTTCCTT
CCTTGTCGTACGGCCGCGTCTCGTTTTTAACGGGGGCGCATCCACTCCACAGACCACAGCGAGCACAGTTATTACTTGTA
CTAGTAGCAGCCTGTAGTCCAGTGACCAA---------------------------------------------------
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----------------------------------------------------------------------CGCAACCCAT
AAAATCAACTCTTTTTTTTTTTGAGAATAGAAAATCAACTTCTTGGCGCACGTGAGCTTCCGCTGTCATA------TCCA
GGGCCGGAAG------CCGGCTCGGCTCTATATAAAACCAACCACAGACCGTGAAAACCAGCAAGCCGACCGAGAGCAGA
GCC-----ACAGCCACCAAAG--------GCGTCTTGGCCGGGTCCATTTCTTGGACAGACCTACC-AACGCTCTCGCAG
GACACGCACGGCCGCACCGCATGTCGTGGTCTGACACGGACGCGGCGCTCTTCGCGGCCGTCCTGGGCCACGACGCCGCG
CGCCACCTGGCCACCACACCGCCGCACCTCGACGGCCCGGCCTCGTCGTCGCCCGAGCTGCAGACGCGCCTGTACGACCT
CGTCGAGCGGGGAGGAGCCTGGACCTACGGCATCTACTGGCAGGAGTCCCGGGCCGGCGCCGGC---------GTGCTCG
GCTGGGGCGACGGGCACTGCCGCGACGGCCCGGCCGAGCAAGCCGGGGCCACGGACAGGAGCCTGGCGCGTAAGCGCGCG
CTGCTGCGGCTCCACGCGCTGTATGGCGGCGGGGACGAGGACGGCGCCGACTACGCGCTCCGCCTCGACCGGGTCACTGG
CGTTGAGATGTACTTCCTGGCGTCCATGTACTTCTCGTTCCGCGAGGACGCCGGCGGCCCGGGCCGCGCGCTCACCTCCG
GCCACCACGCCTGGGCCGCCGTCGATCCCCACCTGCCCGCCGCA---------CCCGGGTGGTACGTCCGCGCGTCCCTC
GCCCAGTCCGCCGGCCTACGCACAGTCGTCTTCCTCCCTTGCAAGGGCGGCGTCCTTGAGCTCGGTTCCGCCGTGGCCAT
GCGCGAGAACCCCGAGGTCCTGCGCGCCATCCAATCTGTCTTCCACGTCGAGGCCGTCGCGCCGGACGATCGCATGAGGA
TCTTCGGGAAGGACGTCTCCCGCAGCCCCCCATTGCCGCCGGTGCAAACCACGGGGAGCGACGCCAGTTGGGCGCTGCGG
CTCGGCGGGCA------------------GGCTAAGCAGGAGGCGGCGGC---GGCCAAACCGAAACCCCAGCAGGAGCC
TCCCAAGACCATAAGCTTCAGCAACGCCGTCGGCGCGCAGAAGCAGGCGGGCGGCGAGGACCGGAGGCCGCGGAAGCGGG
GGCGCAAGCCGGCGAACGGGCGGGAGGAGCCGCTGAACCACGTGGAGGCGGAGCGGCAGCGGCGGGAGAAGCTGAACCAG
CGGTTTTACGCGCTGCGCGCGGTGGTGCCCAAGATCTCCAAGATGGACAAGGCATCGCTGCTGAGCGACGCCATCGCGTA
CATCCAGGAGCTGGAGGAGCGCCTCCGGGGCGGCGCG------------CCGGCGCGGGCGGAGGCCGGGCCGTCCGTGG
AGGTGAAGGCAATGCAGGACGAGGTGGTGCTGCGCGTGAGCACCCCCCTCGACGCGCACCCCATCTCCGGGCCGCTGAGC
GCCATGCGGGACTCCCAGCTGAACGTGGTGGCATCGAGCATGGCGGTGGCGGACGACACCGTCACGCACACGCTCGTGGT
GCGGTCGGCGGGGCCCGAGCGGCTCACGGCCGAGGCCGTGCTGGCCGCGATTTCCCGTGGGGTGATGATGAGCGCCACCC
CCTCCCCGTGACCGTGCAGCTGTAACAATCGCGCGGCTCGTGCCGTAGTACGTACAGGCAACTGTCAACCGTTAGTGTGA
GTTTAGGTGA-----------------GCATGCTCCTCGTGACTGCATGCCACGTAGCGCACAGGAGAAAGGTAAAATGG
TCAATGGGGAGGCTAAAAGGTGAAACCCCTTTCCCCAAGTGGCAGTATCCCAGATTGCCAGTGGTAGATTCTAAGATTCA
TGTAGTGCACCTGGTTATCAATTTGCACTTACTAGCAC-ACAGTAGATCAAATCTACGCAAAATTGTTATGTATAGGAAG
ATGC---AGTAATTCTCAGCCT-TGTGGATGACTCCGTGTTTCTTTGAAGAAGAGACCGTGGAATTTGAGCGCGTCGTGC
GTGGCGGTGGGGGTTTACTTTGACCGACCGCACGCGCTCTCTCCGTTCCAGATCTTTACCTACACCCGCTGGCCTGAAAG
TTTTCCTCGTCGGGTCGTCGTCCACGTCTCTCTCGCGCGGGCGCG-----------------------------------
---AAAACCGTCGTCCCGCGTCTGGACTTGACAGTCGCCGGCCCGCACCGCGTCTTCGCGTGACGCCGCACGCGCGTTGC
--------TTG--------TGACAACTTCTCTTGCGGCGCGTGACCACGGGACTCGCCTCTCGCCTCGCCACCTCTGGTA
GC----CCGG----TGTCGTCGCATCGTGTGACCGCAACCCAACAACCGGGGCTCGTGTCGTGTGCACGCCTCCGATCGG
CTCGCTACTCCTCGCGTCGTGCACGGTTGATGGAGATGTAAGATGTAACCGGTGGTCCGGAGGCAGGCGATGTGTCAGTC
AGCTGCAGGGCGCGCGCACCGGGCCA----ATGGGACCGACGTTACGCGCCAAGAACCTTAAACAGTAACCCTTTCAGTT
GAGGACC---TGATGTGCCGTGGCACCACGGC------------------CTTTTTCTGAACTC----ACTCACCCATGC
TCCGACGCGCGTCACGCTTTAATCAAGTTACAATCAGTTTTTTTTCTTCGAAAAACTTTCAATCTATTGATTTTCAATAC
AATTAGTCGAAGCCGCGAAATCTAAATCACCAACTCCCATCCAGTGCCATTAAGAAGTAGGAGTAACTAAAAGCACGGTG
GCC-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------GATAGAAAGATGTTGATAGAAAAAAAAGCCGT
CTTGATAAACTTTTATAATAGACATGATCCTTTTCATAAGAAAAAAGCACTGCTAATGCTTCACCGTGTAGAGAGTGGGG
GCTATGGAGCCAACTGATTTGATTACTCAACTAAGCTCACTAAAACACAACAAAACAAAAAAGTTCAACAACTATACAAT
TATG
>chr3B_2692
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-------------------AATTTGCACCTACTAGTAC-ACAGTAGATCAAATCTACGGAAAATTGTTATGTATATGAAG
ATGCAGTAGTAATTCTCAGCCT-TGTGGATGACTCCGTGTTTCTTTGGAGAAGAGACCGTGGAATTTGAGCGCGTCGTGC
GTGGCGGTGGGGGTTTACTTTGACCGACCGCACGCGCTCTCTCCGTTTCAGATCTCCACCTACACCCGCTGGACTGAAAG
TTTTCTTCGTCGGGTCGTCGTCGACGTCTCTCTCGCGCGGGCGCAAAAACCGCCGTCCCTTTTGCCTCTGTTTCAAAAAA
AAAAAAACCGCCGTCCCGCGTCTGGACTTGACAGTCGCCGGCCCGCACCGCGTCTTCGGGTGACGCCGCACGCGCGTTGC
TTGCGACTTTG--------TGACAACTTCTCTTGCGGCGCGTGACCACGGGACTCGCCTCTCGCCTCGCCACCTCTGGTA
GC----CCGGCCGGTGTCGTCGCATCGTATGACCGCAACCCAACAACCGGTGCTCGTGTCGTGTACACGCCTCCGATCGA
CTCGGGTC---------CGTGCACGGTTGATGGAGATGTAA-------CCGGTGGTCCGGAGGCAGGCGGTGTGTCAG--
--CT-CAGGGCGCGCGCACACGGCCA----ATGGGACCGACGTTACGCGCCAACAACCTTAAACAGCAACCCTTTCAGCT
CAGGACC---TGATGTGCCGTCGCACCACGGC------------------CTTTTCCTGAACTCACTTACTCACCCATGC
TCCGACGCGCGTCACGCTTTAATCAAGTTACAATCAGT------------------------------------------
-------CGAAGTCGCGAAATCTTAATCACCAACTCCCATCCAGTGCCATTAAGAAGTA------ACTAAAAGCACGGTG
GCGGCAGTAGTGATCGTCTGTCGGACCCGGAGTTTCTGCTCTGCGCTCATTTGCATCCGCGCTTAAAAAAAATCAAAACA
AATACTAAAAGAATTTAAAAAAATTAATTTTTTGTGTGATAGATAATTTGATGAGTGAGGTCCGCTTTAAATTTTAAATT
ATTTGAACATCTAAGCAGCTCTCGGCAAAAAAAATACAAATTCAGGGTGTGTAAAAAGGTTTATTATTCACATACTGTTC
TGACCAGATTTGTCTTTTTTGCCGACAGCTGCTCAGATGTTCAAATGAGTTAAAATTTGGAGTGGACCTCACACATCAAA
TTATCTACCACACAAAAAAATGGATTTTTTTTTATTTTTTTAGTATTTATTTTGATTTTTTTTTTCTGAGCGTGAGCAGA
TAAGCCTGGGCACCGAGTTGAATTTCCCTCATCTGATCATGAAATCTTGAGGCAACTTTTATCATATTTGAGATGCCTTG
TCTTCAATAACCTAGTGCATCATCAATTGAAAGCAATATTTATTGTTAGATAGAAAGATGTTGATAGAAAAAAGAGTTGT
TATGATTAATTTTTATAATAGATCTGATCCTTTTTATAAGAAAAAAGCACTGCTAATGCTTCACCGTGTAGAGAGTGGGG
GCTATGGAGCCAACTGATTTGATTACTCAACTAAGCTCACTAAAACAAACAAAA--------------------------
----
>SNPs
----------------------------------------------------SS--------------------------
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-------------------------------------------------------S------------------------
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S-------------------------------------------------------------------------------
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--------------------------------------------------------S-----------------------
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-------S-S----------------------------------------------------------------------
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--------------------------------------------------S-----------------------------
---S----------------------------------------------------------------------------
------------------------------------S-------------------------------------------
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----------------S---------------------------------------------------------------
------------------------SSS---S-------------------------------------------------
--------S-----------------------------------------------------------------------
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-------------------------------------S------------------------------------------
----------------------------------------------------------------------S---------
--------------------------------------------------------------------------------
-------------S-------------------------------------------------------------S----
--------------------------------------------------------------------------------
------------------------------------S-------------------------------------------
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----------------------------------------------------------------------S---------
--SSSS--------------------------------------------------------------------------
-------S------S-----------------------------------------------------------------
-----------------S--------------------------------------------------------------
------SSSS-----------------------------------SS--------------------SS-----------
--------------------------------------------------------------------------------
----------S---------------------S-----------------------------------------------
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------S--S--------S--S-----------S-----------------
----S-------------SSS---S------SSSSS-S------------------------------------------
-S--------------------------S-----------------------------------------S---------
---------------------------------------------------------------S--SS------------
----
>forward_561
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--------------------------------------------------------------TCATTTTTGGTGCGTGCG
C-------------------------------------------------------------------------------
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>reverse_3849
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--------GCATAAGCTTCAGCGACGC-----------------------------------------------------
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>forward_3697
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-----------------------------------------------------------------------------GGA
TCTTCGGGAAGGACGTT---------------------------------------------------------------
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>reverse_5553
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--------------------------------GCTCCCATCCAGTGCCATTA----------------------------
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----
