>input_sequence_43670
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----------------------------ATGGCGTTCGCGCCGCGGCTCCTGCTGCCGCCACGGCCC------CCCTTGC
CCGC---TCCGGCGCGGGCCTCCGCGCGCCACAACGGCGGCGGGGGGCGCACGGCGCCGGAGCTGTCGGGCCCGACGCCG
CGGGTGGTGGTGGTGACCTCGGGCAAGGGCGGCGTGGGGAAGACCACCACCACGGCTAACCTGGCCGCCTCCCTGGCGCG
GCTGGGGCTCCCCGTGGTGGCCGTGGACGCCGACGCGGGCCTCCGGAACCTCGACCTGCTGCTGGGGCTGGAGAACCGGG
TGAACCTGACCGCCGCCGACGTGCTCGCCGGCGACTGCCGCCTCGACCAGGCCCTCGTCCGCCACCGCTCCCTCCGGGGC
CTCCACCTGCTCTGCCTCTCCAAGCCCCGCTCCAAGCTGCCCCTCGCCTTCGGCTCCAAGACCCTCACCTGGGTCGCCGA
CGCCCTCCGCCGCGGCGCCGACCCGCCCGCCTTCATCCTCATCGACTGCCCTGCAGGTCCGGCCTCGCCGCTCGCCGCAT
TTTTTGCTCGCGTGAATTCCGCATTTGCATCGC-CCTGAT--GAGTCAAAATTGCAATTAGCTCATTTGTTCAACACAAT
CTTATCAGT---ATGATTCTACCATGAATCCATTACCCATGATATTCTCTAGTGTAGTTCAGTTGA-------TTAATCG
TATGATTATACCGTAATACCTCTACACTCTAGTACCGATTACTCTTATGAAATGGACAGCGTCGTGTAATAACCAGTATG
GTTGATTGTCAGTGTTCTGTGCCCCTTG---ATTTGCTTGAGGAATGCAGCTACTGCTGTTTGTTCACCTCTCCCTAGAT
CATAAGGATTTCAGAGCCAGGACTTGTTCTGAATCTCTGATTGTTTCATGATGCGTGTGCACTTG--------GCCGGTA
TGGGGATGGTATCTGGATTTGTCAGATTTGAGCCATTTATCGGGTTATTCTTAC---------------AACATTGTATC
TTAGTTTTGCATTTTCTTACTGCTGTTCTCAAGCAGCATTATTCAAGTTTCACTGCTTGAACTTGTCCCT----GCCGTT
TTAACAAACTGCCTGGTGGCTAGTAGGATCATGTATCTGTAATGTACTCCCTCCGTTCCAAATTACTCGTCGTGGTTTTA
GTTCAAATTAAACTAAAACCAC----------------------------------------------------------
---------------GACGAGTAATTTGGAACGGAGGGAGTAGCAGTGAACATTTGCATGATTCTGTAGTATAATTTGCA
TCATCAGTAACA---------GTTCTACAAGAAGTCTGATTCCTTCCCAGCCTCTGCAGTTTGCATTCAACCCTGTTT--
--CATGCAGTTGCCTGAAAGGCTGAACCGCTCATCTTTACACTGCTTATCTTGGGTTTTTGCCT-TGTAGGTGTTGATGC
TGGGTTTGTCACAGCCATCGCCCCTGCAGAAGAGGCAGTGCTTGTCACCACTCCTGACATCACGGCACTCCGTGATGCAG
ACCGCGTCGCGGGGCTGCTGGAGTGTGACGGCATCAAGGACATCAAGATCATCGTGAACAGAGTGCGGCCGGACCTGGTG
AGGGGGGAGGACATGATGTCAGCGCTCGACGTGCAAGAAATGCTTGGGTTACCTCTGCTAGGTGTGGTGCCAGAAGATTC
AGAGGTAATCCGCAGCACAAACAGGGGCATGCCGTTGGTGCTGACGGACCCGCCCACGCCTGCAGGCCTCGCCCTGGAGC
AGGCGACGTGGCGTCTGGTGGAGCGGGACGCGATGACGGCCGTCATGGTCGAGGAGCAGGAGCGGCCCAAGAAGAAGGGC
GGCTTCTTCTCGTTCTTCGGCGGGTGA-----------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------
>chr7A_1_TraesCS7A01G017400
CTTTGAGAGGTTGATGCAGATGGAGCTCACAGCAAGATCAAAGCAGATACATCCAGCCATGGCCGGTCCTGTGCCTGGTG
GCAGCATGTACGGGCCTGAGCTGGACATGAACCTGAGATACAGATGAAGAAC-GTCTCTGTTGTGCCTGTCGTCGCCATT
CCCTGTTACCCAAACAAACCACCATGTTCTGTGTCCATGAAC----TTGCGCTAGCGTTTGCGGTTGCTACAAGATAAGA
TAGCTCGTCGGGGAGGAAGTGTCGCTGGTGCCGGCGTGCGCCATGTATGTAGTACTTTGTGTCTGAAATGGTTGGATGGG
TTGCTGATGATGATCTGGTGA-----------GGGAGGGAGCGAGGGAGGATACATTGGGTGCTGTCATTGTAGCAGTCA
CATCTGTACCTGTGTCT----GTGTCTGTGTCTGACTATTTGTTTTTCATTTTTGTATAAATACTAAAAAAAAGGACCAG
ATTAACAATAACATATTTGCATTTGGTCCCCCTGATGTTTTTC--T-TTCTTTTTTGAGGAAAAACTAACCATTCACATC
AACCGGGATAAAAGGCTGTGACACAAAGTTAAAATCCAAAAAATAAATTAAAAAGACCAATATATCGATGGATGTCAGCC
TTGGACAATACTGTATTTTTTAGCCCAACAAAGTGGGAGAAATGCACCTCATGCTGAACTTGATGGTGTTATT-------
--------------------------------------------------------------------------------
----------------------------AGTTGGTTGGGGTAAAATGCTTGCGGAAATCTGTGACATGAAGTTAAAAGTT
GATCATCACAAAACCAAATTGTGTACATTTAGATGAATCTTAAAGGACAAATTTTATGTAGCTTATAACAAAGAAAAAAA
GCAGTGCCA----TTTTAACCTTGTTTTTGTGAGGGTAAAATGGGAATTTGTTTTTTGCTAGTCTGAACTCTGAAGCAGC
GGCACTGTGTTGGAGTCTAGTGTTGGTTCCCATCAGCCATGGGCGCAGCCGCCACCCCCGCCTCCTCGTGAGATCCTCCC
GAAACCCTAGCCGCCGC------GCCCAATGGCGTTCGCGCCGCGGCTCCTGCTGCCGCCACGGCCC------CCCTTGC
CCGC---TCCGGCGCGGGCCTCCGCGCGCCACAACGGCGGCGGGGGGCGCACGGCGCCGGAGCTGTCGGGCCCGACGCCG
CGGGTGGTGGTGGTGACCTCGGGCAAGGGCGGCGTGGGGAAGACCACCACCACGGCTAACCTGGCCGCCTCCCTGGCGCG
GCTGGGGCTCCCCGTGGTGGCCGTGGACGCCGACGCGGGCCTCCGGAACCTCGACCTGCTGCTGGGGCTGGAGAACCGGG
TGAACCTGACCGCCGCCGACGTGCTCGCCGGCGACTGCCGCCTCGACCAGGCCCTCGTCCGCCACCGCTCCCTCCGGGGC
CTCCACCTGCTCTGCCTCTCCAAGCCCCGCTCCAAGCTGCCCCTCGCCTTCGGCTCCAAGACCCTCACCTGGGTCGCCGA
CGCCCTCCGCCGCGGCGCCGACCCGCCCGCCTTCATCCTCATCGACTGCCCTGCAGGTCCGGCCTCGCCGCTCGCCGCAT
TTTTTGCTCGCGTGAATTCCGCATTTGCATCGC-CCTGAT--GAGTCAAAATTGCAATTAGCTCATTTGTTCAACACAAT
CTTATCAGT---ATGATTCTACCATGAATCCATTACCCATGATATTCTCTAGTGTAGTTCAGTTGA-------TTAATCG
TATGATTATACCGTAATACCTCTACACTCTAGTACCGATTACTCTTATGAAATGGACAGCGTCGTGTAATAACCAGTATG
GTTGATTGTCAGTGTTCTGTGCCCCTTG---ATTTGCTTGAGGAATGCAGCTACTGCTGTTTGTTCACCTCTCCCTAGAT
CATAAGGATTTCAGAGCCAGGACTTGTTCTGAATCTCTGATTGTTTCATGATGCGTGTGCACTTG--------GCCGGTA
TGGGGATGGTATCTGGATTTGTCAGATTTGAGCCATTTATCGGGTTATTCTTAC---------------AACATTGTATC
TTAGTTTTGCATTTTCTTACTGCTGTTCTCAAGCAGCATTATTCAAGTTTCACTGCTTGAACTTGTCCCT----GCCGTT
TTAACAAACTGCCTGGTGGCTAGTAGGATCATGTATCTGTAATGTACTCCCTCCGTTCCAAATTACTCGTCGTGGTTTTA
GTTCAAATTAAACTAAAACCAC----------------------------------------------------------
---------------GACGAGTAATTTGGAACGGAGGGAGTAGCAGTGAACATTTGCATGATTCTGTAGTATAATTTGCA
TCATCAGTAACA---------GTTCTACAAGAAGTCTGATTCCTTCCCAGCCTCTGCAGTTTGCATTCAACCCTGTTT--
--CATGCAGTTGCCTGAAAGGCTGAACCGCTCATCTTTACACTGCTTATCTTGGGTTTTTGCCT-TGTAGGTGTTGATGC
TGGGTTTGTCACAGCCATCGCCCCTGCAGAAGAGGCAGTGCTTGTCACCACTCCTGACATCACGGCACTCCGTGATGCAG
ACCGCGTCGCGGGGCTGCTGGAGTGTGACGGCATCAAGGACATCAAGATCATCGTGAACAGAGTGCGGCCGGACCTGGTG
AGGGGGGAGGACATGATGTCAGCGCTCGACGTGCAAGAAATGCTTGGGTTACCTCTGCTAGGTGTGGTGCCAGAAGATTC
AGAGGTAATCCGCAGCACAAACAGGGGCATGCCGTTGGTGCTGACGGACCCGCCCACGCCTGCAGGCCTCGCCCTGGAGC
AGGCGACGTGGCGTCTGGTGGAGCGGGACGCGATGACGGCCGTCATGGTCGAGGAGCAGGAGCGGCCCAAGAAGAAGGGC
GGCTTCTTCTCGTTCTTCGGCGGGTGA---AGCCTGAGCTGAACCGAGCCGCCGGTGACGTGCGTGGTGTGTATAGAGCT
GCGATTTGGAGCTGCTTAGTCGTTTTTCGGTTTG--TTTTGCTCTTGTTTT--TCCTAGCGTAGCACGATTCATTCGGTG
TGCTTGATTCCACAGAGACAGACGGTCT-TTTCTTTGTTCTTCCAAATTTACGCCGAACATTAGCAGAGTAAATGTATGT
AGTTTTGTGGTTGATTGCTTCTTGCTGTT---GCAGTGAGCTCATCTTGTTGGAGTGTTGTTGTTCATGGCTTAATTTTG
ATTGTTGAACTGACATCCAGAGGAGATGGGAGAGAAGAGGAGCAGAG--------CCAGGGGCATTGCTCCTTTTATCCC
TTCCAGGAACA-CACCCATTGCAAGCCATTAGAACAATATTTCTTTGTTCCTTTTTCTTGGCATTTGTTTGAAATGTTTA
GTTCTAATTTGTTG--------------------------------------------------------------CATT
GTGGGCAAATTTGTTGCATTCTAAAAAGAATAAACATCATGGTGCGTCAGGGCATGCAACAATATATAGGAATTTATAGG
ACAGTAAAACCGAACCTAAACCCAG-CCCTCACGACCGTCTGTTCACGTGATCTGGCCGTTAGAATTTTTTTTTTTGAGC
AACTTCTGGCCGTTAGATGTGCTGTCAGTTTTGTTCTTTAACGCAGTTTTTTTATGGGCCAACTGTGGCAGCTACTCCAG
AAGAAATAACTGAGCCCTCTAGTTATTTGGGCCTTTTCTCTTAGCCCAGTTACCAATTTGCTAACTACAGTCCGTTACGG
GAATGAGTCCAGTCGATCCGTCGTTGTGGG-TGTTTTCCTATTTGCCGCTCGCTGCGGCAAGTTGCCGAAATCGCTAGTT
GATGAGTACTCGTTGCAAAGATCTTCAACTTCCCAGGTTGCAACAAATGGCGCACATGCAGTGCGCCACTTGTCGCAACC
TGGGAATTTTCCCTTTTTTCGTAGATCCGTTTATTCAGAACGTTTTATCTTTCAAATCGCGCGTTCAAATC
>chr7D_1
CTTCGAGAGGCTGATGCAGATGGAGCTCACAGCCAGATCAAAGCAGATACACCCAGCCATGGCCGGCCCTGTACCAGGCG
GCGGCATGTACGGGCCCGAGCTCGACATGAACCTGAGATACAGATGAAGAAC-GACCCTGTTGTGCCTGTCAT-------
-------ACCCAGACAAACCACCATGTTCTGTGTCCATGAAC----TTGCGCTAGCGTTTGCGGTTGCTACAAGATAAAA
TAGCTCGTCGGGGAGGAAGTTTCGCTGGTGCCGGCGTGCGCCATGTATGTAGTACTTTGTGTCTGAAATGGTTGGATGGG
TTGCTGATGATGATCTGGTGAG----GATGGAGGGAGGGAGGGATGGAGGATACATTGGGTGCTGTCATTGTAGCAGCCA
CATCTGTACCTGTGTCC----GTGTCTGTGTCTGGCTATTTGTTTTTCATTTTTGTATAAATACTAAAAA-AAGGACCAG
ATTAACAATAACATATTTGCATTTGGTCCCCTCTGACGTTTTAGTT-TTTTTGTGTGAAGAAAAACTAACCATTCACATC
AACTGGGATAAAAGGCCGTGACACAAAGTTAAAGTTCAACAAAT-----AAAAAGACCAGTACATGGATGGATTTCATCC
CTACACAATG-----TTTTTCAGCTCAACAGAGCGGGAGGAATGCACCCCATGCTGAACTTGATGGTGTTTTTTC-----
--------------------------------------------------------------------------------
----------------------------AGTTTGTTGCGGTAAAATACTTACTGAAATTTGTCACATGATCATT------
-------ACAAATCCAAGATTTGTATGTTTTGGTCAATCTTAAAGAACAAATGT----TACCTTATAACCAAGAAAAGAA
AAGGCTGTGCCATTTTTCACTCTGTTTTTGTGAGGGTAAAATGGGCATTTTTT--TTGCTAGTCTGAACTCTGAAGCAGC
GGTACTGTGTTGGAGCGTAGTG-TGGTTTCCTTCAGCCATGGTCGCAGCCGCCA---------CCTCGTGAGATCCTCCC
GAAACCCTAGCCGCCGCACG-----CCAATGGCGTTCCCGCCGCGGCTCCTGCTGCCGCCCCGGCCC------CCCTTGC
CCGCCCCACCGGCGCGGGCCTCCGCGCGCCCCAACGGCGGCGGGGGGCGCACGGCGCCGGAGCTTTCGGGCCCGACGCCG
CGGGTGGTGGTGGTTACCTCGGGCAAGGGCGGCGTGGGGAAGACCACCACCACGGCCAACCTGGCCGCCTCCCTGGCGCG
GCTCGGGCTCCCCGTGGTGGCCGTGGACGCCGACGCCGGCCTGCGCAACCTCGACCTGCTGCTGGGGCTGGAGAACCGGG
TGAACCTGACCGCCGCCGACGTGCTCGCCGGGGACTGCCGCCTCGACCAGGCCCTCGTCCGCCACCGCTCCCTCCGGGGC
CTCCACCTGCTCTGCCTCTCCAAGCCCCGCTCCAAGCTGCCCCTCGCCTTCGGCTCCAAGACCCTCACCTGGGTCGCCGA
CGCCCTCCGCCGCGGCGCCGACCCGCCCGCCTTCATCCTCATCGACTGCCCCGCAGGTCCGGCCT---------------
-TTTTCCCCGCGTGAATTCCGCATTCCCATTGC-CCCCCAAAGAATCCAAACCGTAACCAATTCATG---TCAACATGGT
CTTGTCAGTATGATGATTCTACCATGAATCCATTATG-------TTCTCTAGTGTAGCCAATCAATTACTCATTTACTCG
TATGATTATACCGTAATAC--CTACACTGT-GTACAAATTACTCTTATGAAATGGACAGCCCCGTATAATAGCTAGTATG
GTTAATTGTCAGTGTTGTTGTTTGTTCACCCATTTGCTTGAGGAATGCAACTATTGTTGTTTGTTCACCCCTCCCTAGAT
TATAAGGATTTCAGAGCCAGGACTTGTTCTGAATCTGTGGTTGTTTCATGATGCTAGTCCACACTTAT--------GGTA
CGAGGATGGTATCTGGATTTGTCAGATTTGAGCCATTTATCGGGTTATTCTTAC---------------AACGGTGTATC
TTAG--TTGCATTTTCTTACTGCTGTTTTCAAGCAGCATTACTCGAGTTTCACTGCTTGGACTTGTCATAAACTACCGTT
TTAACAAACTGCCTGGTGGCTAGTAGTATCATGTACTCTATCTGTAAT--------------------------------
--------------------------------------------------------------------------------
---------------------------------------GTAGCAGTGAACATAGCATAATTCT----GTATAATTTGCA
TCATTATCAGTAACAACAGTTGTTCTACAAGATGTTTGATGA-TTCCCAGCCTCTGCA-TATGCATTCGACCCTGTTT--
--CATGCAGTTGCCTGAAA--------CGTGCATCTTGCCCCTGCTGAACTTGGTCTTTTGCCT-TGTAGGTGTTGATGC
CGGGTTCGTCACAGCCATCGCCCCTGCTGAAGAGGCGGTGCTTGTCACCACTCCCGACATCACGGCACTCCGTGATGCAG
ACCGCGTTGCGGGGCTGCTGGAGTGCGACGGAATCAAGGACATCAAGATCATCGTGAACAGAGTGCGGCCAGACCTGGTG
AGGGGGGAGGACATGATGTCAGCGCTCGACGTGCAAGAAATGCTCGGGTTACCTCTGCTAGGCGTTGTGCCAGAAGATTC
AGAGGTGATCCGCAGCACAAACAGGGGCGTGCCGTTGGTGTTGACGGACCCGCCCACGCCCGCGGGCCTCGCCCTGGAGC
AGGCGACGTGGCGTCTGGTGGAGCGGGACGCGATGACGGCCGTCATGGTCGAGGAGCAGGAGCGGCCCAAGAAGAAGGGC
GGCTTCTTCTCCTTCTTCGGCGGGTGA---AGCCTGAGCTGAGTCGAGCCGCCGGTGACGTACGTGGTGTGTATAGAGCT
GCGATTTGGAGCTGCTTAGTCGTTTTTCGGTTTG--TTTTGCTCTCGTTTT--TCCTAGCGTAGCACGATTCATTCGGTG
TGCTTGATTCCAC--AGACAGACGGTCT-TTTCTTTGTTCTTCCAAATTCACGCTGAACATTAGCAGAGTAAATGTATGT
AGTTTTGTGGTTGATTGCTTCTTACTGTT---GCTGCGGTTTCATCTTGTTTGAGTGTTGTTGTTCATGGCTTCATATTG
ATTGTTGAACTGAGATGGAGAGGAGATGGGAGAGAAGAGGAGCAGAGAAAATTGGCCAGGGGCATTGCTCTTTTTTATCC
TTCCCAGGAACGCACCCATTGCAAGCCATTAGAACAATATTTCTTTGTTCCTTTTTCTTGGCATTTGTTTGAAATGTTTA
GTTCTAATTTTAGGTTTTAAAACAGTAATTAAAAGTGAATCAAGAACTCCATGACATTCGAAATACCAAGTTCTTACATT
GTGGGCAAATTTGTTGCATTCTAAAAAATTTAAACATCATGGTGTGTCAGGGCGTGCAACAATATATAGGAATT--TAGG
ACAGTAAAACCGAACCTAAACCCAGTCCCTCATGACCGTCCGTTCACGTGATCTGGCCGC--------------------
-------------TAGATGTGCTGTCAGTTTTGTTCTTTAACGCAGTTTTTTTATGGGCCAACTGTGGCAGCTACTCCAG
AAGAAAAAACTGAGCCCTCTAGTTATTTGGGCCTTTTCTCTCAGCCCAGTTACCAATTTGCTAACTACAGTCCGTTGCGC
GAATGAGTCCAGTCGATCCGTCGTTGTGGGGTGTTTTCCTATTTGCCGCTCGCTGCGGCAAGTTGCGGA-----------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>chr4A_1
CTTCGAGAGGCTGATGCAGATGGAGCTCACAGCCAGATCAAAGCAGATACACCCAGCCATGGCCGGCCCTGTACCAGGCG
GCGGAATGTACGGGCCCGAGCTCGACATGAACCTGAGATACAGATGAAGAACTGTCTCTGCTGTGCCTGTCGTCGCCATG
CCCTATCACCCAAACAAACCACCATGTTCCGTGTCCATGAACGAACTTGCGTTAGCGTTTGCGGTTGCTT-AAGATAAGA
TAGCTCGTCGGGGAGGAAGTTTCGCCGGTGCCGGTGTGTGCCATGTATGTAGTACTTTGTGCCTGAAATGGTTGGATGGG
TTGCTGATGATGATCTGGTGAGGAGGGAGGGAGGGAGGGAGGGAGGGGGGATACATTGGGTGCTGTCATTGTAGCAGCCA
CATCTGTACCTGTGTCTGTCTGTGTCTGTGTCTGACTATTTGTTTTTCGTTTTTGTATAAATACTAAAAA-AAGGACCAG
ATTAACAATAACATATTTGCATTTGGTCCCCCTGATGCTTCAATTTGTTTTTGTTTGAGGAAAAACTAACCATTCACATC
AACTGGGATAAAAGGATGTGACACAAAATTA-AGTTGAACAAAT-----AAAAAGACCAATACATGGATGGATGCCATCC
TTACACAATA-----ATCTTTAGTTCAACAAAGTGCGAAAAATGCACCTCATGCTGAACTTGATAATGTTATTCAGTACT
CCTTCCGTCCCAAAATAAGTGTCTCAATTTCGTACTAACTTTGGTACAAAGTTTAGTACAAAGTTGAACTAAGGTTGAGA
CAGACGCTTACTTTGGGATAGAGGGAGTAGTCGGTCGGGGTAACATGCTTGCTGAAATCTGTGACACGAAGTTCAAAGTT
TATCATCACAAAACCAAAATTTGTACATTTAGATCAATCTTAAAGGACAATTTTTATGTTTCTTATAACAAAGAAAAAAA
AGCA--GTGCCATTTTTCACTTTGTTCTTGTGAGGGTAAAATGGGCATTTTTTTG-------------CTCTGAAGTGGT
CGCACTGTGTAGGAGTGTGGTG-TGGTTCCCATCAGCCATGGTCGCAGCCGCCA---------CCTCGTGAGATCCTCCC
GAAACCCTAGCCGCCGCTGCCCCGCCCAATGGCGTTCCCGCCGCGGCTCCTGCTGCCGCCCCGGCCCCCCTCGCCCTCGC
CCGC---ACCGGCGCGGGCCTCCGCGCGGCCCAGCGGCGGCGGGGGGCGGACGGCGCCGGAGCTGTCGGGCCCGACGCCG
CGGGTGGTGGTGGTGACCTCCGGCAAGGGCGGCGTGGGGAAGACCACCACCACGGCCAACCTGGCGGCCTCCCTGGCGCG
GCTCGGGCTCCCCGTGGTGGCCGTGGACGCCGACGCCGGCCTCCGGAACCTCGACCTGCTGCTGGGGCTGGAGAACCGGG
TGAACCTGACCGCCGCCGACGTGCTCGCCGGGGACTGCCGCCTCGACCAGGCCCTCGTCCGCCACCGCTCCCTCCGGGGC
CTCCACCTGCTCTGCCTCTCCAAGCCCCGCTCCAAGCTGCCCCTCGCCTTCGGCTCCAAGACCCTCACCTGGGTCGCCGA
CGCCCTCCGCCGCGGCGCCGACCCGCCCGCCTTCATCCTCATCGACTGCCCCGCAGGTCCGC------------------
-----------------TCCGCATTTGCTTCACACCCGAT--GAATCCAAATTTCAATTAGCTCATT---GCAATACGAT
CTTATCAGT---ATGATTCTACCATGAATCCATTGTCCGTGATATTCTCTAGTGTAGCTCAGTCGA-------TTAATCG
TGTGATTATACCGTTATAC--CTACACTCTAGCACCGATTAATCTTATGAAATG------------TAATAGCTAGTATG
GTTAATTGTCAGTGTTTTTTGCCCCTTG---ATTTGCTTGAGGAATGCAGCTGCTGCTGTTTGTTCACCCTTCCCTAGAT
CATAAGGATTTCAGAGCCAGCGCTTGTACTGAATCTCTGATTGTTTCATGATGCTTTTGCGCACTTGTGGTATGCCGGTA
TGGGGATGGTATCTGGATTTGTCAGATTTGAGCCATTTATTGGGTTATTCTTACCGGGTTAATTCTTAGAACAGTGTATC
TAAG--TTGCATTTTCTTACTGCTGTTCTCAAGCAGCATTATTCAAGTTTCACTGCTTGAACTTGTCATATAACGCCATT
TTAACAAACTGCTTGGTGGCTAGTAGTATCATGTATCTGTAATGTACTCC-TCCGTTCCTAAATATTTGTCTTTTTAGAG
ATTGACTACCGCATACGGATGTATATAGATATATTTTAGAGTGTAGATTCACTCATTTTGCTTCGTATGTAGTCACTTGT
TGGAATCTCTAGAAAGACAAATATTTAGGAATGGAGGGAGTAGCAGTGAATGTTTGCATGATTCTGTAGTATAATTTGCA
TCATCAGTAACA---------GTTC-ACAAGATATTTGATGA-TTGCCAGCCTCTGCAGTATGCATTCAACCCTGTCTGT
TCCATGCAGTTGCCTGAAA--------CGCGCACCTTCGTGCTGCCTAATTTGTTTTTTTTCCCCTGTAGGTGTTGATGC
CGGGTTTGTCACAGCCATAGCCCCTGCAGAAGAGGCGGTGCTTGTCACCACTCCCGACATCACGGCACTCCGTGATGCAG
ACCGCGTCGCGGGGCTGCTGGAGTGCGACGGCATCAAGGACATCAAGATCATTGTGAACAGAGTGCGGCCGGACCTGGTG
AGGGGGGAGGACATGATGTCAGCTCTTGACGTGCAAGAAATGCTCGGGTTGCCTCTGCTAGGCGTTGTGCCGGAAGATTC
AGAGGTAATCCGCAGCACAAACAGGGGCGTGCCGTTGGTGCTGACGGACCCGCCCACGCCCGCGGGCCTCGCCCTGGAGC
AGGCGACGTGGCGTCTGGTGGAGCGGGACGCGATGACGGCCGTCATGGTCGAGGAGCAGGAGCGGCCCAAGAAGAAGGGC
GGCTTCTTCTCCTTCTTCGGCGGGTGATGGAGCCTGAGCGGAGTCGAGCCGCCGGTGACGTGCGTGTTGTGTATAGAGCT
GCGATTTGGAGCTGCTTAGTCATTTTTTCGGTTTGCTTTTGCTCTTGTTTTTTTCCTAGCGTAGCACGATTCATTTGGCG
TGCTTGATTCCACGGAGAGACGAACAGTCTTTCCTTTTTCTTTCAAATTTGCGGTGAACATTAGCAGAGTAAATGTATGT
AGTTTTCTGGTTGATTGCTTCTTGCTGTTGCAGCAGTGAGCTCATCTTGTTCGAGTGTTGTTGTTCATGGCTTAATTTTG
ATTGCTGAACTGAGATGGAGAGGAAATGGGAGAGAAGAGGAACAGAGAAAATTGATCAGGGGCGTTGCTCCTTTTTATCC
TTCCCAGGAACGCACCCATTGCAAGCCATTAGAACAATATTTCTTTGTTCCTTTTTTCTTGGCATT--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>SNPs
---S------S----------------------S-----------------S--------------S-----S--S--S-
--S-------------S-----S--------------------------------------------------------S
----S-S-------------------------------------------------------------------------
--------------------S-----------------------------------------------------------
-----------------------------------------S-----------------------------------S--
----------------------------------------------------------------------S---------
-------------------------------------S----S------S--S---------------------------
---S-----------------------------S-S---S----SSSSS-------------S--S-----------S--
--SS------SSSSS---------S-------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------S--------------------S------
S-----------------S-S-------------S-------------------------S-------------------
SSS-SSSSS--------S--S------------------------S----S---S-------------------------
----------------S-----S-------------------S-----------SSSSSSSSS-----------------
-------------------------------------S----------------------S-------------------
-------S----------------------S-------------------------------------------------
--------------------------------------------------------S-----------------------
---S--------------------------------S-------------------------------------------
-------------------------------S------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S-------------SSSSSSSSSSSSSSS
S----S-S----------------------------S-------S--S-------------------SSS-------S--
-----------------------------------S--S------------------S-----S----------------
-------------------SS---------------------------------------SS---S-----S-S------
---S------------S-S--------------------------------------------------S----------
------------------------------------------------------S-------SSS---------------
-------------------------------------------------------------------------S------
----SS-------------------------------------------------------------SSS----------
--------------------------S-----------------------S--------S--S--S-S---S-SS-SSSS
S--S-SSSSSSSS--SSSSSSS----------------------------------------------------------
------------------S-S--S--S----S------------------------------------------------
--------------------------------S--S----SSS-----------------S-------------------
-------------------SSSSSSSS---S------SS-S-------S-----S-------------------------
S-----------------------------------S-----------------S-------------------------
-------------------------S------------------------------------------------------
--------------------------------------------S-----------------S--S--------------
----------------------------S-------------------------------S--S----------------
--------------------------------------------------------------------------------
-----------S------------------------------SS------------------------------------
--------------------------------------------------------------------------------
-------------S----------------------------------------S-------------------------
---------------------------------------------------S----------------------------
-------------S--SS---------------------------------------------------------SSS--
----SS-S-SS---------------------------------------------------------------------
----------SSS-------------------------------------------------------------------
---------------------------SSS--------------S--------S--------------------SS----
--------------------------------S-------S------------------SSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSS-------------------------------------------------------------------
------S----------------------------------S----------------------------------S--S
------------------------------------------------------------------S--SSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_644
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------------------------------------------------TCGATGGATGTCAGCC
TTGG----------------------------------------------------------------------------
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>reverse_2432
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------CGGAGGGAGTAGCAGTGAAC-----------------------------
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>forward_1652
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------TCATCCTCATCGACTGCCCT----------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------
>reverse_3765
--------------------------------------------------------------------------------
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----TCTGGCCGTTAGATGTGCTG--------------------------------------------------------
--------------------------------------------------------------------------------
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