>input_sequence_43659
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-------------------------------------------ATGGCGGATCTGCAGACGCCGCTGGTGCGACCAAAGA
GGAAGAAGGTCTTGGTGGACTACCTGGTGCAGTTCCGATGGATCCTCGTCATCTTCGTGGTGCTTCCGGCCTCGGCGCTC
ATCTACTTCAACATCTACCTGGGCGACATGTGGTCCGCCATGAAGTCGGAGAAGAAGCGGCAGAAGGAGCACGAGGAGAA
CGTGCAGAAGGTCGTGAAGCGGCTCAAGCAGCGCAACCCCAAGAAGGACGGCCTCGTCTGCACGGCCAGGAAGCCCTGGA
TCGCCGTCGGCATGCGCAACGTCGACTACAAGCGTGCCAGGCACTTCGAGGTCGACCTCTCTGCCTTCAGGAACATCCTT
GAGATCGACCCCGAGAGGATGGTTGCCAAGGTGGAGCCGCTCGTCAACATGGGCCAGATATCCAGGGCCACCTGCCCGAT
GAACCTCTCCCTCGCCGTGGTGGCGGAGCTCGACGACCTCACCGTCGGCGGCCTCATCAACGGCTACGGCATCGAGGGGA
GCTCTCACATCTACGGGCTCTTCTCCGACACGGTGGTGGCGCTGGAGATCGTCCTGGCTGACGGCCGGGTCGTCCGGGCC
ACCAAGGACAACGAGTACTCCGACCTCTTCTACGGCGTGCCCTGGTCGCAGGGCACTCTCGGGTTCCTTGTTTCAGCCGA
GATCAAGCTCATCCCCATCAAGGAGTACATGAGGCTGACCTACACCCCGGTGAAGGGCCCCCTGAAGGAGGTGGCGCAGG
CATACGCCGACGCCGTCGCGCCGAGGGACGGCGACCCCGCAAAGGTCCCCGACTTCGTGGAAGGGATGGTGTACAGCGCG
ACGGAGGGCGTGATGATGACCGGCGTGTACGCGTCCAAGGAGGAGGCCAAGAAGAAGGGCAACAAGATCAACAGCGTGGG
GTGGTGGTTCAAGCCATGGTTCTACCAGCACGCGCAGACGGCGCTCAAGAAGGGCGAGTTCGTGGAGTACATCCCGACGA
GGGAGTACTACCACAGGCACACCCGGTGCCTGTACTGGGAGGGGAAGCTCATCCTGCCCTTCGGCGACCAGTTCTGGTTC
AGGTTCCTCTTCGGCTGGCTGATGCCCCCCAAGGTGTCCCTGCTCAAGGCCACCCAGGGCGACGCCATCAGGAACTACTA
CCATGACAACCATGTCATCCAGGACATGCTCGTGCCGCTGTACAAGGTTGGAGACGCCCTCGAGTTCGTCCACCACGAGA
TGGAGGTATGTCTATCTTTCCCTTGCTTA-----ACATTCACGTAGGCATA-----------------------------
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---------------------------------TTGCTGCTCATGCTCATGCTCATGCTCATGCTCATGCTCAATAACAA
CAAACAGGTGTACCCGCTGTGGCTGTGCCCGCACCGGCTGTTCAAGCTGCCGGTGAAGACGATGATCTACCCGGAGCCTG
GGTTCGAGCACCACCAGCGGCAGGGGGACACGAGCTACGCGCAGATGTTCACGGACGTGGGGGTGTACTACACGCCGGCG
TGCATCTTCAGGGGGGAGGAGTTCGACGGGGCGGAGTCGGTGAAGCGGCTGGAGCAGTGGCTGATCGAGAACCACAGCTA
CCAGCCGCAGTACGCGGTGACGGAGCTGAACGAGAAGGACTTCTGGCGCATGTTCGACGCGTCGCACTACGAGCACTGCC
GGCAGAAATACGGCGCCGTGGGCACCTTCATGAGCGTCTACTACAAGTCCAAGAAGGGGCGCAAGTCGGAGAAGGAGGTG
CAGGAGGCCGAGGCCGCCATCCTCGAGCCCGCCTACGCCGACGAGGCCTAG-----------------------------
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>chr7B_1_TraesCS7B01G484200
GCATGTACTAACTACATCGCAGCCGCACAAATCTGGCTAAACATGCAGCATTTTTACTTACACGGCAACTCTGAATGTTA
CTATATGTTATCGGTGCTAGGGGTTAAAAGATGATGGTGCA---------TAGGTTTTGACATGTGGAGCTCTGAATGAA
TGACAGCAGGTGTTAGG-AATTACTCATGGTTGTGCGTATGTG---TACTTCTCACGGAGTTACTCATGCCATGTCATGT
CACCAGTTCCTTGGCAGCTACTGTAGGTTGCTCTGCCTGTGAACGATG-CTGTCTGTTACCCTCT--ACTCCATGTTGAT
CCAGTTTGTGTAAAGAATATGCTCCATGTTACTAGATGTCACTGCATCATTTTCACCTAACATCATGTGGCGATAAAAAA
TAGAATAGGGATGGATGCGTCTTGGCAACCAAGCCATAAGAAAAAGGCTACTCTGCTTTTGTTATGTTTCGCCTCTCCTG
TTTACAGTTTTTTAACC----CTAGTATACACTTCTTCCCTGTTACTCTTATATATACCACCATGGCTCAGCTGACATTA
CTGATGTGATC--------ATGCCCAATGGCCTGGCACCTGCACTGCCCATGTCCGTGACAGCATCTGTTTGTA---TAA
TAATAGGATATG--------------------------------CTTAACATTATATGACAGTTAAAAATTCAAAATGGA
ATTGGGATGGATAAAGAGTCTTACTGATACAGCCCTT-GGTCAATATATGTCT---------------------------
------------------------------------------------------------TTGGGGGCCATGACAATGCT
ACTCTTCTGTTCTTCTTTTCAGCCTCGCCTGTGTATAATTATTTCTTCCTGATATGCTTTGCTTTTAAGCTGTACAGTAC
ATGGTAAAT-TGGAATTGGGATGGTTGTGTCCTGGTAGTCATGAGAATATGT---TACTGCTGCTGCATTTGTTATTTTT
TGCCTTTCCTGTGTAGAT--TTTCTCCCTGATATGCTTCAATGTTACTGTTATATCAT--ATCATGGCTCAGCTAACATC
TGTTTG---TACACTTTT-CATTTCAGAAATTAGCCTCCAGCCATGGCGGATCTGCAGACGCCGCTGGTGCGACCAAAGA
GGAAGAAGGTCTTGGTGGACTACCTGGTGCAGTTCCGATGGATCCTCGTCATCTTCGTGGTGCTTCCGGCCTCGGCGCTC
ATCTACTTCAACATCTACCTGGGCGACATGTGGTCCGCCATGAAGTCGGAGAAGAAGCGGCAGAAGGAGCACGAGGAGAA
CGTGCAGAAGGTCGTGAAGCGGCTCAAGCAGCGCAACCCCAAGAAGGACGGCCTCGTCTGCACGGCCAGGAAGCCCTGGA
TCGCCGTCGGCATGCGCAACGTCGACTACAAGCGTGCCAGGCACTTCGAGGTCGACCTCTCTGCCTTCAGGAACATCCTT
GAGATCGACCCCGAGAGGATGGTTGCCAAGGTGGAGCCGCTCGTCAACATGGGCCAGATATCCAGGGCCACCTGCCCGAT
GAACCTCTCCCTCGCCGTGGTGGCGGAGCTCGACGACCTCACCGTCGGCGGCCTCATCAACGGCTACGGCATCGAGGGGA
GCTCTCACATCTACGGGCTCTTCTCCGACACGGTGGTGGCGCTGGAGATCGTCCTGGCTGACGGCCGGGTCGTCCGGGCC
ACCAAGGACAACGAGTACTCCGACCTCTTCTACGGCGTGCCCTGGTCGCAGGGCACTCTCGGGTTCCTTGTTTCAGCCGA
GATCAAGCTCATCCCCATCAAGGAGTACATGAGGCTGACCTACACCCCGGTGAAGGGCCCCCTGAAGGAGGTGGCGCAGG
CATACGCCGACGCCGTCGCGCCGAGGGACGGCGACCCCGCAAAGGTCCCCGACTTCGTGGAAGGGATGGTGTACAGCGCG
ACGGAGGGCGTGATGATGACCGGCGTGTACGCGTCCAAGGAGGAGGCCAAGAAGAAGGGCAACAAGATCAACAGCGTGGG
GTGGTGGTTCAAGCCATGGTTCTACCAGCACGCGCAGACGGCGCTCAAGAAGGGCGAGTTCGTGGAGTACATCCCGACGA
GGGAGTACTACCACAGGCACACCCGGTGCCTGTACTGGGAGGGGAAGCTCATCCTGCCCTTCGGCGACCAGTTCTGGTTC
AGGTTCCTCTTCGGCTGGCTGATGCCCCCCAAGGTGTCCCTGCTCAAGGCCACCCAGGGCGACGCCATCAGGAACTACTA
CCATGACAACCATGTCATCCAGGACATGCTCGTGCCGCTGTACAAGGTTGGAGACGCCCTCGAGTTCGTCCACCACGAGA
TGGAGGTATGTCTATCTTTCCCTTGCTTA-----ACATTCACGTAGGCATA-----------------------------
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---------------------------------TTGCTGCTCATGCTCATGCTCATGCTCATGCTCATGCTCAATAACAA
CAAACAGGTGTACCCGCTGTGGCTGTGCCCGCACCGGCTGTTCAAGCTGCCGGTGAAGACGATGATCTACCCGGAGCCTG
GGTTCGAGCACCACCAGCGGCAGGGGGACACGAGCTACGCGCAGATGTTCACGGACGTGGGGGTGTACTACACGCCGGCG
TGCATCTTCAGGGGGGAGGAGTTCGACGGGGCGGAGTCGGTGAAGCGGCTGGAGCAGTGGCTGATCGAGAACCACAGCTA
CCAGCCGCAGTACGCGGTGACGGAGCTGAACGAGAAGGACTTCTGGCGCATGTTCGACGCGTCGCACTACGAGCACTGCC
GGCAGAAATACGGCGCCGTGGGCACCTTCATGAGCGTCTACTACAAGTCCAAGAAGGGGCGCAAGTCGGAGAAGGAGGTG
CAGGAGGCCGAGGCCGCCATCCTCGAGCCCGCCTACGCCGACGAGGCCTAGGGTCGTCGTGTTCGTCGTCGTCGGCCGTC
CGTGTCTCGACGGTTTCGGTTCCTTCAGTCGTCGGAACT---------CTGGATTAATTGGTTCCCTTTTGCTTGGTTGC
TTAATTATTAATAAGTAGAACTTGATCGATCGTGTAGCGTTGATTGGTAGCAGCCTGCGGCCTGTAGCAGCATGAGTCAT
TGTTGTCGCCCGTGAGTACTTGATTCAACCGCCCCTTTATGTTGATGGGATT-AATTGCTTAGAACTTAAAATGAGGCAG
ATGCGTATGTGGGAATAATATTGCGATTTGTGTTGAAAGTGGGATGAAGTGGATGATAGC--------------------
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-------------------TGATTCAGGGATGAAAATTCAAGATAAAAACGGGCGGTGAGTGATGATGATGCACTAGTGT
GGTTGCCTCTGTGCGTGTGGGACCGACCAAAAGTGACCGTCCATTCCATCCTTGTGCGCTGCTGGGTGGTAATAATACTG
TGTGATGGTCACGGGAGGGGCATGATGCGTGCAGTCTAACAATGTCTAACAATAAAAATAAAAAGAGAGGGATGGACGGC
TGTGAGTGAGTGCCGACGCCGACGCTGGCTGGTCCGTGGTGTAGTAATCAATAGGCATGGTCGCCGTGGTAGCTCTGTCA
GACTGTCTGCCACCACCACGCTGCGCACTGCTGCCGGCGTTATTACATAAGCGACAACCCGGCCTCGTGGATCCATCTCT
CTCGGGTCTAGCTAAAAACCCTCGCAAACCAAGCCCCTGCCACTTGCAACGCACACTTACACCGCTTGCAGAGCTCCAGC
TCGACCTCTAGCTAGCATCCATGGCGCAGCCTCTCACTCGCCGCCGTCTCCTCCTTCCTCCGCCTCTGCTTCTGCTGATG
CTCCTCCTCGCTCTCGCCGCCCACCATCAGGCCGCTTCCGACCCACCGGTAATTAAGCAAACCACACACACAATCAAACA
CGCATGCAGATGTTTTTTACCCTCAGATCATCACATCTCAACCCTTTTTCTGCTGCAGGC
>chr7D_43
------------------------------------------ATGCAGCATTTTTACTTACGCTGCAACTCTGAATGTTA
GATAGTACCGGTGTTAGGAGCT----AAAGATGATGGTGCAGTGTCGGTGTAGGTTTTGACATGTG--------------
--ACAGGAGGTGTTAGG-AATTACTTATGGTCGTGCT----TGTACTACTTCTCATGGAATTACTCATGTCATGC-----
C--CAGTTCCTTGGCAGC-----TAGGTTGCTCTGCCTGTGAATGATAAGTGTCTGTTACCCTCT--A---CATGTTGAT
CCAGTTTGTGCAAAGAATATGCTCCATGTTA---GATGTAACTGCATCGTTTTCACCTAACATCATGTGGCGATTAAAAA
TAGGATAGGGATGGATGCGTCTTGGCAACCAC-----GAGAAAAAGACTACTCTGCTTT-GTTATGTTTCGCCTTTCCCA
TTTACGATTT---AACC----CTAGTAC--G---CTTCCCTGTTACTCTT----GTACCATCATGGCTCAGCTAACATTA
CTGATGTGAC--------GATGCCCAATGGCCTGGCAGCTGCATTGCCCCTGTCCGTGACAGCATCTGTTTGTG---TAA
TAGGATATGCTCATCCATGTTGCTGCAC---------TTAATTTCTTAACATTATATGACAGTTAAAAATTAAAAATGGA
A----------------------CTGATACAGCCATAGGGTCAATATATGTCT---------------------------
------------------------------------------------------------TTGGGGGCCATGACAATGCT
ACTGTTCTGTTCTTCTTTTCAGCCTCGCCTGTGTATAATTATTTCTTCCTGATATGCTTCGCTTTTAAACTGTACTATAC
ATGGTAAAA-TGGAATTGGGATGTTTGTGTCCTGATAGTCATGAGAATATGT---TACTGCTGCT---TTTGTTATTTTT
CGCCTTTCCCGTGTACAG--TTTATCTCTGATATGCTTCACTGTTACTGTTATATCATCAATCATGGCTCAGCTAACATC
TCTTTG---TACTCTTTT-CATTTCAGAAGTCAGCCTCCAGCCATGGCGGATCTGCAGACGCCGCTGGTGCGACCAAAGA
GGAAGAAGGTGCTGGTGGACTACCTGGTGCAGTTCCGATGGATCCTCGTCATCTTCGTGGTGCTTCCGGCCTCGGCGCTC
ATCTACTTCAACATCTACCTGGGCGACATGTGGTCCGCCATGAAGTCGGAGAAGAAGCGGCAGAAGGAGCACGAGGACAA
CGTGCAGAAGGTCGTGAAGCGGCTCAAGCAGCGCAACCCCAAGAAGGACGGCCTCGTCTGCACGGCCAGGAAGCCGTGGA
TCGCCGTCGGCATGCGCAACGTCGACTACAAGCGTGTCAGGCACTTCGAGGTCGACCTCTCTGCCTTCAGGAACATCCTT
GAGATCGACCCCGAGAGGATGGTCGCCAAGGTCGAGCCGCTCGTCAACATGGGCCAGATATCCAGGGCCACCTGCCCCAT
GAACCTCTCCCTCGCTGTGGTGGCGGAGCTCGATGACCTCACCGTCGGCGGCCTCATCAACGGCTACGGCATCGAGGGGA
GCTCTCACATCTACGGGCTCTTCTCCGACACGGTGGTCGCGCTGGAGATCGTCCTGGCTGACGGCCGGGTCGTCCGAGCC
ACCAAGGACAACGAGTACTCCGACCTCTTCTACGGCGTGCCCTGGTCGCAGGGCACTCTCGGGTTCCTTGTTTCAGCTGA
GATCAAGCTCATCCCCATCAAGGAGTACATGAGGCTCACCTACACCCCGGTGAAGGGCCCCCTGAAGGAGGTGGCGCAGG
CGTACGCCGACGCCGTCGCGCCGAGGGACGGCGACCCCGCAAAGGTCCCCGACTTCGTGGAAGGGATGGTGTACTCCGCG
ACGGAGGGCGTGATGATGACCGGCGTGTACGCGTCCAAGGAGGAGGCCAAGAAGAAGGGCAACAAGATCAACAGCGTGGG
GTGGTGGTTCAAGCCATGGTTCTACCAGCACGCGCAGACGGCGCTGAAGAAGGGCGAGTTCGTGGAGTACATCCCGACGA
GGGAGTACTACCACAGGCACACCCGGTGCCTGTACTGGGAGGGGAAGCTCATCCTGCCCTTCGGCGACCAGTTCTGGTTC
AGGTTCCTCTTCGGCTGGCTGATGCCGCCCAAGGTGTCCCTGCTCAAGGCCACCCAGGGCGATGCCATCAGGAACTACTA
CCATGACAACCATGTGATCCAGGACATGCTGGTGCCCCTGTACAAGGTTGGAGACGCCCTCGAGTTCGTCCACCACGAAA
TGGAGGTAC----GTTCCTCTTCTGTTCTGCGTGACATTCATGCAGATATGCTTGCATCAAGTCTTTTAGCTAGGAATTT
GCTATGAATTCATATTCTTCCCCTT-------------------------------------------------------
------------------------------------TTGTTGCTTACTCTGAATGCTCACTGAATATTGATACAGTAGGT
AGTACCTAATTTTGCTGCTTGTGCTCACTGAATGTTGGTATGGTAATTAATAGGCGCCTGATATTGCTGCTAAT-ATTAG
TCTGAAAGTAGGAAAGAATGTTGTTGGTTCACCGAGTGAAACTGAAGAACGTGTCTGTGTTATAACATAAC---------
--AACAGGTGTACCCGTTGTGGCTGTGCCCTCACCGGCTGTTCAAGCTGCCGGTGAAGACGATGATCTACCCGGAGCCGG
GGTTCGAGCACCAGCAGCGGCAGGGGGACACGAGCTACGCGCAGATGTTCACGGACGTGGGGGTGTACTACACGCCGGCG
TGCATCTTCCGCGGGGAGGAGTTCGACGGGGCGGAGTCGGTGAAGCGGCTGGAGCAGTGGCTGATCGAGAACCACAGCTA
CCAGCCGCAGTACGCGGTGACGGAGCTGAACGAGAAGGACTTCTGGCGCATGTTCGACGCGTCGCACTACGAGCACTGCC
GGCACAAGTACGGCGCCGTGGGCACCTTCATGAGCGTCTACTACAAGAGCAAGAAGGGGCGCAAGTCCGAGAAGGAGGTG
CAGGAGGCCGAGGCCGCCATCCTGGAGCCCGCCTACGCCGACGAGGCCTAGTCGTGTTGTCTCGCTGCTGGTTTCGGT--
----------------------CTTGAGTCGGCGGAACTCCTCCGATCCTGGATTAATTGGTTCCCTTTTGCTTGGTTGC
TTA-TTATTAATAAGTAGAACTTGATGGATCGTGTAGCGTTGATTCGT--------------------------------
---------------------------ACCCCCCCTTTATGTTGATGGGATTTAATTGCTTACAACTTAAAATCAGGCAG
ATGTGTATGTGGGAATAATATTGTGCTTTGTGCTTTGTGCTTTGTGCTTTGTGGCGTGTGTCCGTGCCCGGGTTCTGTGC
ACCAAGCTGAGAACCTGAGTGCTGCTGGGATGTGCTCCTGCTAGTGAGTAGGCAATGGGGCTGTGCTCATGAGACGGGTG
TGTTTGTGGCTTGTGCGTTGGTTTCAGTTGAGTGCCAACAAGTTTGCAGTGACACCGAGCTTGCAGGATATGGAAGGTGA
AGTAGTGATTCGGAGATGAAAGTTGAAAGAAAAATAACGGCTCTGTGGGTGAGCAGTAATGTGCTTGTGCTTGATTGCCG
GGTGAGTCAAGTGAAGAATTTATTCTGGGATAGAAATTCAAAGATAAAACTAGCATTGTGC-------------------
--TTGCCTCTGCCTGTGTGGGACCGACCAAAAGTGACCGTCCAT------------------------------------
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>chr1B_141
--------------------------------------------------------------------------------
---------------------------------------------------------------------CTCTGAATGAA
TCTTAGGAGGTGTTAGGGAATTACATATGGCTGTGCA----TG---TACTTCTCATGGAATTACTCATGTCATGTCA---
----AGTTCCTTGGCAGC-----TAGGTTGCTCTGCTTGTGAATGATA-GTGTCTGTTACCCTCT--A---CATGCTGAT
CCAGTTTGTGTGAAGAATATGCTCCATGTTA---GATGTCACTGCATCATTTTCACCTACCATCATGTGGCGATTAAAAA
TAGAATAGGGATCGATGCGTCTTGGCAGC--AGCCATGAGAAAAAGGCTACTTTGCTTTTGTTATGTTTTGCCGTTCCTA
TTTACAGTTT---AACC----CTAGTATGTG---CTTCCCTGTTACTCTTGG-TATGCCATCATGGCTCAGCTAACATTA
CTGATGTGATGAACTGATGATGTCCAATGGCCTGGCAGCCGCATTGG--CTGTCCGTGACAGCATCTTTTTGTA---TAA
CAATAC------------------------------------------ACATTATATGACAGTTAAAAATTCAAAATGGA
ATTGGGATGGATAAAGAGTCTTACTGATACAGCCCTT-GGTCAATATATGTCT---------------------------
------------------------------------------------------------TTGGGGCCCATGACAATGCT
ACTGGTCTGTTTTTCTTTTCAGCGTTGTCTGTGTACA---ATTTCTTCTTGATATGCTTCACTTCTAAGCTGTACAGTAC
ATGGTAAA------------------------------------------------------------------------
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>chr2A_192
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-----------------------------------------TG---TACTTCTCATGGAATTGCTCATGTCATGTCATGT
C--CAGTTCCTTGGCACA-----TAGGTTGATCTGCCTGTGAATGATA-GTGTCTCTTACCCTCT--A---CATGTTGAC
CCAGTTTGTGTAAAGAATATGCTCCATGTTA---GATGCCACTGCATCATTTTCACCTAACATCATGTGGCGATTAGAAA
TATAATAGGGATGGATGCGTCTTGGAAACCAC-----AAGAAAAAGGCTACTCCGCTTTTGTTATGT-------------
-----------------------AGTATATG---CTTCCATGTTGCTCTT----ATACCATAATGGCTTAGCTAACATTA
CTCATGTT--------ATGATGTCCAATGGCCTGGCAGATGCATTGCG-ATGTCCGTGATAGCATCTGTTTGTG---TAA
CAGGATATGCTCATCCATGTTGCTGCACCATTTCCGCTTAACTTCTTACCATTATATGACAATTAAAAATTCAGAATGGA
ATTGGGATAGAC---GAGTCTTATTGATACACCCCTT-GGTCAATATTTGTCT---------------------------
------------------------------------------------------------TTGGGGGCCATGACAATGCT
AATGTTCTATTTTT---TTAT-CCTTGCCTGTGTACA---ATTTCTTCTTGATATGCTTCACTTTTAAACTATACATTAC
ATGGTAAAA-TGGAATCGGGATGGTTATGTCCTGGTTGTCATAAGAATATGT---TACTCCTGCT---TTTGTTATTTAT
CGCCTTTCCTCTGTACAG--TTTATCCCTGGTATGCTTCCATGTTACTACTATATC----ATCATGGCTCAGCTAACATC
TCATTG---TGCTCTTTTTCATTTCATAAGTCAGAATTCGGCCATGGTGGCTCTGCAGACGCCGCTGGTGCGACCAAAGA
GGAAGAAGGTTCCGGTGGACTACCTG------------------------------------------------------
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>chr7A_251
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-----------------------TAGGTTGCTCTGCCTGTGAATGATA-GTGCCTGTCACCCTCTTAA---CATGTTGAT
CCACTTTGTGCAAAGAATATGCTCCGTGTTA---GATGTCACTGCATCATTTTCACCTAACATCATGTGGCGATTACAAA
TAGGATACAGATGGATGCATCTTGGCAACCAAGCCATGAGAAAGGGGCTACTCTGCTTTTGTTATGTTTTGCCTTTGCTG
TTTACAGTTT---AACCCTAGCTAGTATATG---CTTCCCTGTTACTCTTATATATACCATCATGGCTCAGCTAACAGTA
CTGATGTGATC--------ATGTCCAACGGCCTGGCAGCTGCATTGCCCCTGTCCGTGACAGCATCTGTTTGCATAATAA
TAGGATATGCTCATCCATGTTGCTGCACCATTTTCACTTAATTTCTTAACATTATATGACAGTTGAAAATTCAAAATGGA
ATTGGGATGGATAAAGAGTCTTACTGATACAGCCCTT-GGTCAATATACAGTACTCCCTCCGTAAACAAATATAAGAGTG
TTTAGATCACTACTTTAGTGATCTAAATGCTCTTATATTCCTTTACAGAGGGAGTATGTCTTTGGGGCCATGGCAATGCT
ACAGTTCTGTTCTTCTTTTCAGCCTTGCCTGTGTATAATTATTTCTTCCTGATATGCTTCACTTTTAAACTGTACTA--C
ATGGTAAAAATGGAATTGGGATCCTTGTGTCCTGGCAGTCATGAGAATATACTAGTACTGCTGCT---TTTGTTATTTAT
CACCTTTACTGTGTATATTCTTTCTCCCTGATATACCTC-CTGTTACTGTTATATCATCAATCATGGCTCGGCTAACATC
TCTTTCTACTACTCTTTT-CATTTCAGAAGTCAGCCTCCAGCCATGGCGGACCTGCAGACGCCGCTGGTGCGACCAAAGA
GGAAGAAGGTTCTGGTGGACTACCTGGTGCAGTTCCGATGGATCCTCGTCATCTTCGTGGTGCTTCCGGCCTCGGCGCTC
ATCTACTTCAACATCTACCTGGGCGACATGTGGTCCGCCATGAAGTCCGAGAAGAAGCGGCAGAAGGAGCACGAGGACAA
CGTGCAGAAGGTCGTGAAGCGGCTCAAGCAGCGCAACCCCAAGAAGGACGGCCTCGTCTGCACGGCCAGGAAGCCGTGGA
TCGCCGTCGGCATGCGCAACGTGGACTACAAGCGCGTCAGGCACTTCGAGGTCGACCTCTCCGCCTTCAGGAACATCCTC
GAGATCGACGCCGAGAGGATGGTCGCCAAGGTCGAGCCGCTCGTCAACATGGGCCAGATATCCAGGGCCACCTGCCCCAT
GAACCTCTCCCTCGCCGTGGTGGCGGAGCTCGACGACCTCACCGTCGGCGGCCTCATCAACGGCTACGGCATCGAGGGGA
GCTCTCACATCTACGGGCTCTTCTCCGACACGGTTGTCGCGCTGGAGATCGTCCTGGCCGACGGCCGGGTCGTCCGAGCC
ACCAAGGACAACGAGTACTCCGACCTCTTCTCCGGCGTGCCCTGGTCGCAGGGAACTCTCGGGTTCCTTGTCTCAGCCGA
GATCAAGCTCATCCCCATCAAGGAGTACATGAGGCTCACCTACACCCCTGTGAAGGGCCCTCTGAAGGAGGTGGCGCAGG
CGTACGCCGACGCCGTCGCGCCGAGGGACGGCGACCCTGCAAAGGTCCCCGACTTCGTGGAGGGGATGGTGTACAGCGCG
ACGGAGGGCGTGATGATGACCGGCGTGTACGCGTCCAAGGAGGAGGCCAAGAAGAAGGGCAACAAGATCAACAGCGTGGG
GTGGTGGTTCAAGCCATGGTTCTACCAGCACGCGCAGACGGCGCTGAAGAGGGGCGAGTTCGTGGAGTACATCCCGACGA
GGGAGTACTACCACAGGCACACCCGGTGCCTCTACTGGGAGGGGAAGCTCATCCTGCCCTTCGGCGACCAGTTCTGGTTC
AGGTTCCTCTTCGGCTGGCTGATGCCCCCCAAGGTGTCCCTGCTCAAGGCCACCCAGGGCGACGCCATCAGGAACTACTA
CCATGACAACCATGTCATCCAGGACATGCTGGTGCCCCTGTACAAGGTTGGAGACGCCCTCGAGTTCGTCCACCACGAGA
TGGAGGTAAAAATGTTCCTCTTCTGCCTA-----ACATTCATGCAGATATGCTTGCATCAAGTCTTTTAGCTAGGAATTC
ATCTTCCCTTTTTTGGGCTACTTAGCATTCATTTCAGTAGATATGTGCATCGAGTATGCTAGGCTGCAGGAGCTGTGAAT
TTCTGCGCATTTACCAACTGCATTGTCATTGTGTAGTTGTTGCTTGCTCTGATTGTTCATCCAGCAG-------------
-GTAACTAATATTGCTGCTTGAATGTCGATACAAAGTATA--------------------ATATTGCTGCTAAAAATTAG
TCTGAAAGAAAGAAAGAAAGAAGAACGTTCTGTTTGGTGTTCATTCTCATGATAATGCTTATGACAT-------------
--AACAGGTGTACCCGCTGTGGCTGTGCCCTCACCGGCTGTTCAAGCTGCCGGTGAAGACGATGATCTACCCGGAGCCGG
GGTTCGAGCACCAGCAGCGGCAGGGGGACACGAGCTACGCGCAGATGTTCACGGACGTGGGGGTGTACTACACGCCGGCG
TGCATCTTCCGCGGGGAGGAGTTCGACGGGGCGGAGTCGGTGAAGCGGCTGGAGCAGTGGCTGATCGAGAACCACAGCTA
CCAGCCGCAGTACGCGGTGACGGAGCTGAACGAGAAGGACTTCTGGCGCATGTTCGACGCGTCGCACTACGAGCACTGCC
GGCACAAGTACGGCGCCGTGGGCACCTTCATGAGCGTCTACTACAAGAGCAAGAAGGGGCGCAAGTCGGAGAAGGAGGTG
CAGGAGGCCGAGGCCGCCATCCTCGAGCCCGCCTACGCCGACGAGGCCTAGGCCGTCAGTTCGT----------------
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>chr5B_296
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-----------------------------------------------------------------------CATGTTGAC
CCAGTTTGTGTAAAGAATATGCTCCATGTTAG----------------ATTTTCACCTAACATCATGTGGCGATTAGAAA
TATAATAGGGATGGATGCGTATTGGCAACCAC-----AAGAAAAAGGCTACTCTGCTTTTGTTATGT-------------
-----------------------AGTATATG---CTTCCCTGTTGCCT-----TATACCACCATGGTTCAACTAACATTA
CTCATGTT--------ATGATGTCCAATGGCCTGGCACATGCATTGCAT-TGTCCGTGATAGCATCTGTTTGTG---TAA
TAGGATATGCTCATCCATGTTGCTGCACCATTTTCGCTTAATTTCTTACCATTGTATGACAATTAAAAATTCGGAATGGA
ATTGGGATGGAC---GAGTCTTACTGATACACCCCTT-GGTCAATATTTGTCT---------------------------
------------------------------------------------------------TTGGGGGCCATGACTATGCT
AATGTTCTGTTCTT---TTCAGCCTTGCTTGTGTACA---ATTTCTTCTTGATATGCTTCACTTTTAAACTGTATAGTAC
ATGGTAAAA-TGGAATT-GGATGGTTATGTCCTGGTTGTCATGAGAATATGT---TACTGCTGCT---TTTGTTATTTAT
CGCCTTTCCTGTGTACAG--TTTATCCCTGGTATGCTTCCCTGTTACTACTATATC----ATCATGGCTCAGCTAACATC
TCATTGTGCTCT--TTTT-CATTTCAGAAGTCAGCCTCCGGCCATGGCGGATCTGCAGACGCCGCTGGTGCGACCAAAGA
GGAAGAAGGTTCTGATGGACTACCT-------------------------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------S-S----------------
SSSSS-SSSSSS-S-SSS--SSSSSS----------------------------------------SSS-----------
-S----S------------------S----------SSSSS--------------S---S---------S----------
-SS---------------SSSSS--------------------S---S-S------------------SSS---------
-------------------------------SSS----------------------------------------S-----
--------------------------------------------------------------------------S-----
----------SSS----------------SSSSS---------------------------------------S------
-------------------------------------------S------------------------------------
-----SSSSS-S--------------------------------------------------------------------
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---S-------------------------------------------------------S--------------------
--------S--------------------------------------------------------SSS------------
S--------------S----------------------------------------------------------------
-S----------S----------------S-S------------------------------------------------
----------SS--------------------------------------------------------------------
-----------------------------------------------------------------------------S--
---------------------------------------------------------------------------S----
------------------------------------S-------------------------------------------
-----------------------S--------S--------------------------------------------S--
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-------------------------------------S--------------------------------------S---
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------------------------------------S-------------------------------------------
-S------------------------------------------------------------------------------
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---------------------------------------------S----------------------------------
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------------------------------S-----S-------------------------------------------
--------SSSS-S-SSS--SSS------------------S-S--SS--S-----------------------------
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------------------------------------S--S----S------S-S-----S---SS---SSSSSSSSSSSS
SS----------------------------S-----------------------------------------------S-
-------------S------------------------------------------------------------------
---------S-S--------------------------------------------------------------------
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----S--S---------------------------------------SS-------------------------------
----------------------------------------------------SSS--S--S-SSS-SS-S--SSSSSSSS
SSSSSSSSSSSSSSSSSSSSSS---S-----S------------------------------------------------
---S----------------------S------------------S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSS---S-------------------------------S----------S------
---S-------------------S-S------S-SSSS-SSSSS--SSS--SSSSS-SSS--------------------
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--------------------S----S-----SS--------SSSS-----SS--SS--S-SSSSSSSSSSSSSSSSSSSS
SS---------SSS------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_260
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
CACCAGTTCCTTGGCAGCTA------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------
>reverse_1358
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------GAA
CGTGCAGAAGGTCGTGA---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------
>forward_261
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-ACCAGTTCCTTGGCAGCTAC-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------
>reverse_2126
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------CAAGAAGGGCGAGTTCGTGG---------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------
>forward_1553
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------AGAGGATGGTTGCCAAGGTG-----------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------------------------
>reverse_3911
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------GCACTAGTGT
GGTTGCCTCT----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------
