>input_sequence_43654
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----------------------------------------------------------------------ATGTTGCATG
AGCGGCACGCACCACCCTCCGCGTCCGACGACGAGGACGATGCCCCAGGGCCCAACGACGAGGAGGGCACTCTGGTGA--
-------CCAGCACCACCAACACCACCTTCCACGACGTCGACGAGGTGATCGAGGTGCGCGAGGTCCACCCCCTGTCGCC
GCCGCCGCAGCACCCGCCCTTCACGCCGCCCACGCGCACCGTCTCCGCCGCCTCCACCGCCTGGGACAGCGCCAGCAGCC
ACCGCTCCGTCACCTCCGAGGAGCAGTTCATGACGATGAGCCGCGAGTTCACGGCCATGGTCGCCGCCGGCGCCGGCGCC
GGCGCGGCCAACA---ACGCCAACAGTAACAACAGCAACAGCAACCACCCC---GGCGGCCCCTACGACGGCGGCGCCGA
CCAGCTGACCAGCATCGGCGAGGACGAGCTGGAGGAGCACAACCCGCTGGCCATCGTGCCGGACAGCGGCCGCCCCTTCG
CCACGCCGCCCAGCAGGAGCGGCGGCGGCAGCGGCAGGGCGGCGCGGCTCGACCTGGAGGTGGTTCCCGCCGCCGGCCCG
CCGGTGGAGGCGAGCCAGGTGAAGAAGGAGGAGGTGGAGACCAAGGTGTCGGCGTGGCAGACGGCGGAGATCGCCAAGAT
CAACAACCGGTTCAAGAGGGAGGAGGTGGTCATCAACGGCTGGGAGACGGAGCAGGTCGACAAGGCCTCCGCCTGGCTCA
AGAAGATTGAGGTAATGATTACTCTACAGAAGAAATTCTTCACCTCCTTTTGCACTTCTTTTCTGATGATT------AAA
ATATCACTGGAATTCTGCTTGCTTTGAGCTTAATTTACATCTAGCATCATC---------TTTCCTTGCAACAAAGAAAG
AAAAAAAATCTCCAAGCTTGACAG---TCCTATCAATTCAAGAGAGAAAAGGAGTAAAGCATGACAAATTAATACAGCGA
CTAAACTGCCCAAAAATATTTTGTCTTGCACAG-ATTAGAACGGTTCCGATACTGAA----TAGATAACTGATGGTTGGT
GGACTCAGCACATATAATTTGTGATCACTGATTAGCAAGCTGG--TTTTTTTCTCCAAAAAAAAAAGAGAGGAAGTTTCT
AGGCCTAGCAACACTAATACAGTACTCCTTTTGAGTAGAATAGTACTCCACTATTGGTTATCTATTCTTGTTTTGAGAAA
AGGTATATGAAATGAACCAATCCCAAATTAGTTATTTAGAGGTGTTACATCTGA--GTGGCTGTCTCAATTGCCCCTTTC
CTTCTGGGTGCGTGCATGTGAACATCAGTTCGTTTTACAGCTC--AATCATGCAACTTTCTGCGCATAAAGGAGACTACT
GTTTACCTGTGAGATTATCATGGATCGTTAGCACGTTGGTTTCACAGCGATAAGACCAGT------AGAGTGGTGGTCTT
TGTCCGAGAGAGCCACTGGCTATCAGTTCAGTTTCAGAGTTCTCCTTTAGCTTTTCACACACATACCCTTTCCTCCATGC
TGCAAATCATGCTTAGTTACTGTCTGGTTGGTGTCTTTTATCAAGAAGCACAGTACAGACTCTGTATCTATGTCTAACTG
TGATGGATCCCACGAAATGGCGGGTGCAGAGGAAGCTGGACGAGCAGCGCGCCAAGGCGGTGGAGAAGACGCAGAACGAC
GTGGCCAAGGCGCGGCACAAGGCGGAGGAGAAGCGGGCGTCGGCGGAGGCCAAGCGGGGGCTCAAGCTGGCCAAGGTGCT
GGAGCTGGCCAACTTCATGAAGGCCGTCGGCAGGGTGCCCACCAAGCGCTCCTTCTTCTAG-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------
>chr5D_1_TraesCS5D01G477500
CCGAGACATTGGTTAAGCCTCCGTTTGACTTTGGCGAGACTATGGTGTCACCGTACGCGTGAATAAAGTCTCTCCACCTC
ACCCTCGTTCCGGTGATGCTTATTCGTATCGCCAGGAGGTGTGTGGAAGATGGTGTGTCCTAAGATCTGGTTCTTCTGGT
CTGGTGTTTCTTTTGCAGGTTTGTCTCGGTCGCGCTACCCTGCGGAGCAGATAACGTGTCT----GTCTTGATCCGCTGG
CTCCAGTTTTGATCGGCGAAGGTTAACCAGACTCGGCCTTGTCAAGGAGCGTGTGAGATTTGTGTTCTCCGGCTCCGTCT
GGCCGGAATTGGGGTCTACAAGCCCTCTCAACCATCTTCTTCTCCATAGCGGCAATTTGTTACAGAAACTGCGGCGGCCG
ACGTCTTCAAATCAACATCGATGACTTGTC-GGCGCTACTTTTATAAGCTTCTTTTGGGTTTAAACAAGTTTGCTCCGAT
GAAATAGGGACCAA-AGGAGGGAAGGAGCTTTGCTCACGGCGCGCCGCCGATGTATGGGTGGGGGGAGAACACTGAGTGC
CCTAAAGAAATTGGATGTATTTTTTTCATGCAAGGGTGTCTTTGTACACCATAATGTCAAAAAAAATGTCTTACATTATC
GGACTGAGGGAGTACTTTGT-------ATAGTGTCTTTGGACTTTTCAAAAAAATATAAATAAAACCAAGGCTTAAACGA
ACATTCGCAGCTGCCCCCGCGACACGTACGTGTCATCCGCCGGTACGCGCCACGGGAGACAAGCCAGCCCCCACCTGCCA
TCGCCGTCGCCTCACCCGCGCCCGGGACAGATGGACGGATGAACAGATTGATATAACCACACCCCATCACCCACCCACAC
ACA----CCACCACACCGCGCGCTGACACAGCAAGATCATCGACCGAGCAGTGA-------GTCTGTCAAGAGGGCGAGG
CGTGCACTGCTGGTCCTCCT------TCTCCCGCGCATGGTGCCCCGTCCCCGCCGGCCGGCGCCGACACATGTTGCATG
AGCGGCACGCACCACCCTCCGCGTCCGACGACGAGGACGATGCCCCAGGGCCCAACGACGAGGAGGGCACTCTGGTGA--
-------CCAGCACCACCAACACCACCTTCCACGACGTCGACGAGGTGATCGAGGTGCGCGAGGTCCACCCCCTGTCGCC
GCCGCCGCAGCACCCGCCCTTCACGCCGCCCACGCGCACCGTCTCCGCCGCCTCCACCGCCTGGGACAGCGCCAGCAGCC
ACCGCTCCGTCACCTCCGAGGAGCAGTTCATGACGATGAGCCGCGAGTTCACGGCCATGGTCGCCGCCGGCGCCGGCGCC
GGCGCGGCCAACA---ACGCCAACAGTAACAACAGCAACAGCAACCACCCC---GGCGGCCCCTACGACGGCGGCGCCGA
CCAGCTGACCAGCATCGGCGAGGACGAGCTGGAGGAGCACAACCCGCTGGCCATCGTGCCGGACAGCGGCCGCCCCTTCG
CCACGCCGCCCAGCAGGAGCGGCGGCGGCAGCGGCAGGGCGGCGCGGCTCGACCTGGAGGTGGTTCCCGCCGCCGGCCCG
CCGGTGGAGGCGAGCCAGGTGAAGAAGGAGGAGGTGGAGACCAAGGTGTCGGCGTGGCAGACGGCGGAGATCGCCAAGAT
CAACAACCGGTTCAAGAGGGAGGAGGTGGTCATCAACGGCTGGGAGACGGAGCAGGTCGACAAGGCCTCCGCCTGGCTCA
AGAAGATTGAGGTAATGATTACTCTACAGAAGAAATTCTTCACCTCCTTTTGCACTTCTTTTCTGATGATT------AAA
ATATCACTGGAATTCTGCTTGCTTTGAGCTTAATTTACATCTAGCATCATC---------TTTCCTTGCAACAAAGAAAG
AAAAAAAATCTCCAAGCTTGACAG---TCCTATCAATTCAAGAGAGAAAAGGAGTAAAGCATGACAAATTAATACAGCGA
CTAAACTGCCCAAAAATATTTTGTCTTGCACAG-ATTAGAACGGTTCCGATACTGAA----TAGATAACTGATGGTTGGT
GGACTCAGCACATATAATTTGTGATCACTGATTAGCAAGCTGG--TTTTTTTCTCCAAAAAAAAAAGAGAGGAAGTTTCT
AGGCCTAGCAACACTAATACAGTACTCCTTTTGAGTAGAATAGTACTCCACTATTGGTTATCTATTCTTGTTTTGAGAAA
AGGTATATGAAATGAACCAATCCCAAATTAGTTATTTAGAGGTGTTACATCTGA--GTGGCTGTCTCAATTGCCCCTTTC
CTTCTGGGTGCGTGCATGTGAACATCAGTTCGTTTTACAGCTC--AATCATGCAACTTTCTGCGCATAAAGGAGACTACT
GTTTACCTGTGAGATTATCATGGATCGTTAGCACGTTGGTTTCACAGCGATAAGACCAGT------AGAGTGGTGGTCTT
TGTCCGAGAGAGCCACTGGCTATCAGTTCAGTTTCAGAGTTCTCCTTTAGCTTTTCACACACATACCCTTTCCTCCATGC
TGCAAATCATGCTTAGTTACTGTCTGGTTGGTGTCTTTTATCAAGAAGCACAGTACAGACTCTGTATCTATGTCTAACTG
TGATGGATCCCACGAAATGGCGGGTGCAGAGGAAGCTGGACGAGCAGCGCGCCAAGGCGGTGGAGAAGACGCAGAACGAC
GTGGCCAAGGCGCGGCACAAGGCGGAGGAGAAGCGGGCGTCGGCGGAGGCCAAGCGGGGGCTCAAGCTGGCCAAGGTGCT
GGAGCTGGCCAACTTCATGAAGGCCGTCGGCAGGGTGCCCACCAAGCGCTCCTTCTTCTAGCCCGCCCGCCCGCCGGCCT
CCCTCAACTCTGGAATCC----TGTCTGTTTTTGCCCATGGGTA----GTAAAAAGTAAGGGCGTGTGCTGCTGCTGCTG
CATCCGATCGGTCGGGAAACCTAATTGTAAAAAGG-ATTTGAAAACT---TGCTGCTGCTGCTGCCTCCGTTGTATACTA
GCCGCCGGGGGCCATCACTGATCACACGGTGGCGCTTTTTTGTTTGGCTTGTATATGCACG-AAAAACTGGTGTGGAAAT
GGAATGAATAGCGTGTTTGCCACAAACCTGCAAACATTCAGAGCAATTGTTCGTATCTAACACTGCTGGTGTGGATCTTT
ACGTTCTTCGGTTCTGTAT-----T----ATGTATCTAGCTGAAAGTTATCATAGTCCTT-TAACGCCTATCACGAGAGA
C-------GTTGCATCAATGGTCCGGCTGGTGGAGACGATTGTTACCCTTG------CACACCCAGGATCACGCAATAAG
TTAACCCTTGTGTGTGTGCGTGCGTTTCGACGAAACGGCTTAGTTTTT----------CAACGTGCTGCCCGTCGATAAT
GAAGTGCACTGTGTCCAATCTTGGATTTCTT-GGTTTTGCAGCGACT--TTG---CTATTAGTCTTCCAGCTCCAGAGTC
CACCCTTGGCTTGCGTTTTCTTTTCTTTTTTTGAGATTTTGGAGATATGGCTTGCGTTGTCTGAACTCGAGCTGGCACTT
TTGGCCACAAAAAATAATGGTGATAACTCGAGCCGGGCACTGTGTGTGTGCCCGTCGAGTACGCATCATGGTGACCGATG
AGGAACCTGCGCCGCACGTCACCGCATTCGCCATTTT-----CATTTCCCTCGTGACAACGCCGGCTAGTGGAATCATCA
TTTTATTCTATTCTATCTATCTATCGTCTGAATGGCGAAAGCGACCCCGTGCCTGTGATTGACCGACGGGCATAACCCCA
ACTAAGACGGGCCTTGTCTGGCATCGACACGAGGGCGTGGCTGTAGACATCGGCATCGGCATGGCCAGGCACTGCCCG
>chr5A_2
CGAGGCATTA-GTTAGGCCTCCGTCTGACTGTGGCGAGACTATGGTGTCACCGCAGGCGTGGAATCCACCTC--------
-CCCTCGTTCCGGTGATGCTTCTTCGTATTGCTAGGAGGCGTGTGGAAGATGGTGTGTCCTAAGATCTTATTCTTCGGGT
CTGGTGTTTCTTTTGCAGGTTTGTCTCGGTTGCGCTATCCTGCAGAGCACATAACGTGTCTATACGTCTTGATCCGCCGG
CTCCAGTTTTGATCGGCGAAGGTTAACCAGACTCCGCCTTGTCAAGGAGTGTGTGAGATTTGTGTTCTCTGGCTCCGTCT
GACCGGAATTGGGGTCTACAAGCCCTCTCAACCATCTTCTTCTTCATAGCGGCAATTTGTTACACAAACTGCGGCCGCCG
ACGTCTTCAAATCAACATCGATGACTTGTCGGGCGCTACTTTTATAAGCTTTTTTGGGGTTTAAACAAGTTTGCTCCGAT
GAAATAGGGACCTAGAGGGGGCAAGGGGCTTTGCTCA-------------------------------------------
-----------------------------GCAAGGGTGTCTTTGTACACCATAGTGTCAAAGAAAC-GTCTTACATTATC
GGACTGAGGGAGTACTTTATAGTTTACATACTGTCTTTGGACTTTTAAAAAAAAAATAAGAA----CAAGGCTTAAACGA
ACATTCGCAGCTGCCCCCGCGACACGTACGTGTCATCCGCCGGTACGCGCCACGGGAGACAAGCCAGCCCCCACCTGCCA
TCGCCTTCGCCTCACCCACACCCGGGACAGATGGACGGATGAACGGACTGATATAACCACACCCCAT----CACCCACAC
ACA----CCACCACACCGCGCACTGACACAGCAAGATC--------------GA-------GTCAGTCAAGAGGGCGAGG
CGTGCACTGCTGGTCCTCCTC------CTCCCGCGCATGGTGCCCCGTCCCCGCCGGCCGGCGCCGACACATGTTGCATG
AGCGGCACGCACCACCCTCCGCGTCCGACGACGAGGACGATGCCCTAGGGGCCAACGACGAGGAGGGCACTCTGGTGACC
ACCACCGCCAGCACCACCAACACCACCTTCCACGACGTCGACGAGGTGATCGAGGTGCGCGAGGTCCACCCCCTGTCGCC
GCCGC------ACCCGCCCTTCACGCCGCCCACGCGCACCCTGTCCGCCGCCTCCACCGCCTGGGACAGCGCCAGCAGCC
ACCGCTCCGTCACCTCCGAGGAGCAGTTCATGACGATGAGCCGCGAGTTCACCGCCATGGTCGCCGCCGGCGCCGGCACC
GGGGCGGCCAACAGCAACCCCAACAGTAACAACAGCAACAGCAACCACCACCCAGGCGGCCCCTACGACGGCGGCCCCGA
CCAGCTGACCAGCATCGGCGAGGACGAGCTGGAGGAGCACAACCCGCTGGCCATCGTGCCGGACAGCGGCCGCCCCTTCG
CCACGCCGCCCAGCAGGAGCGGCGGCAGCAGCGGCAGGGCGGCGCGGCTCGACCTTGAGGTCGTCCCCGCGGCCGGCCCG
CCGGTGGAGGCGAGCCAGGTGAAGAAGGAGGAGGTGGAGACCAAGGTGTCGGCGTGGCAGACGGCGGAGATCGCCAAGAT
CAACAACCGGTTCAAGAGGGAGGAGGTGGTCATCAACGGCTGGGAGACGGAGCAGGTCGACAAGGCGTCCGCCTGGCTCA
AGAAGATTGAGGTAATCATCACTACTACATGAACAACAAGATCCTTCAGA----------TTCTGATGAAAATCT-----
---ACTGTGGAATCCTACTTGCTTTGAGCTTAATTTGCATCTAGCATCATC---------TTTCCTTGCAACCG----AG
AAAACAATTCTCCAAGCTTCACAGCACTCCTGTCAATTCAAGAAAGAAAAGTAGTAGAGCATGACAAATTAATACAGCAA
CTAAATTGCCCAAAATTAGCACATGAGA----------------------------TTAGGTAGACCATCGATGGTTGAT
GCAATCAGCACATGAGATTTGTGCACACTGATTAGCGAGCTGA--TTTTTTTTCTCCC---AGATAAAAAGGAAGTTCCT
ACGCCTAGCAACACTAATACAGTACCCCTTTTGAGTAGAATAGTGTAA-----------ATCTATTCTTGCTTTGAGAAA
AGGTATATGAATCTCCAAGAT----AATTAATTAGATAGAGGTGTTACATCAGAGCGTGGCTGTCTCAATTGCCCCTTTT
CTTGTGGGTGAGTGCATGTGAACATCAGTTCGTTTTACAGCTC--AATCATGCAACTTTCTGCGCCAAAAGGGAG--ACT
GTGTACCTGTGAGATTATCATGGACCGTTAGCACGTTCATCTCACGGCGATAGGACTGTTCT-ATGAGAGTGGCGGCCTT
TGTCCGGGAGAACCACTAGTAGTGCATGTGA-------------------------------------------------
---AAATCATGCTTGCTTGCTGTCCAGTTAGTGTATCCTATCTGAATGTTCATCTCGGTCACCT----TATGTCTAACTG
TGATGGATCCCACGACCACGC--GTGCAGAGGAAGCTGGACGAGCAGCGCGCCAAGGCGGTGGAGAAGACGCAGAACGAC
GTGGCCAAGGCGCGGCACAAGGCGGAGGAGAAGCGGGCGTCGGCGGAGGCCAAGCGGGGGCTCAAGCTGGCCAAGGTGCT
GGAGCTGGCCAACTTCATGAAGGCCGTGGGCAGGGTGCCCACCAAGCGCTCATTCTTCTAGCCCGCCGGCCT--------
-CCTCAACTGGAGAATCCTACGTATGTGTTTTTGCCTATAGGTCGTA----------AAGGGCGTGTGC------TGCTG
CATCCGATCGGCCGGGAAACCTAATTGTAAAAAGG-ATTTGAAAC-------CTGCTGCTGCTGCCTCCGTTGTATACTG
GCCGCCGGTGGCGATCACGGATCACACGGTGGCGCTTTTTTGTTTGGCTTGTATATGCACG-CAAAACTGGTGTGAAGAT
GGAATGAATAGTGTGTTTGCCACAAACCTGCAAACATTCAGAGCATTTGTTCATATGTGACACTGCTGGTGTGGATCTTT
ACCTTCTTCATTCAGTTCTGTATGT----ATATATCTAGCTGAAAGTCGTCGTGGTCCTTCTAACGCCTATCAAGAGAGA
ACCAACAAGTTGCATCAAT-----GGCTGATGGAGACGACTGTTACTTGCCCTTGCACACACCCAGGATCAGGCAACAAG
ATGACCCACACCCTTGTGTGTTCCAACGAAG---ACGGCCTAGTTTTTCAGTGGTGGACAACGTGCTGCCCGTCGATAAC
GAAGTGCACGGTGTCCAATCTTGGATTTCTT-AGTTCTGCAGCGACT--TTATTATTATTAGTCTTCCAGCTACAGAGTC
CGACCTTGGCTCGCGTTTTGTTTTCTGTTCTTGAGATTTTGGGGATTTGGCTTGCGTTGTCTGAACTCGAGCTGGCACTT
TTGGCCACAAAAAATAATGCT-------------GGGCAC----TGTGCGGCCGTCGAGTAGGCATCATGGTGAGCGATG
AGGAACCTGCGCCGCACGTCACCGCATTCGCCATTTC-----CATTTCCCTCGTGACAAGGCCGGTTAGTGGAATCATCA
TTTTATTCTA-TCTATCTATCTATCGCCTGAATGGCGAAAGCGACCCCGTGCCTGTGATTGACCCAACTAGACGAGGGAG
GGAGGGATGGGCCTTGTCTGGCATCGACACGAGTCCGTGGCTGTAGGCATCAGGC-----------------------
>chr5B_685
AAAAA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------------AA----CAAGGGTTAAACGA
ACATTCGCAGCTGCCCCCACGACACTTACGTGTCATCCCACGGTACGCGCCACGGGAGACAGGGCCGCCCCCACCTGCCA
TCGCCGTCGCCTCACCCACACCCGGGACAGATGGACGGATGAAGAGATTGATATAACCACACCCCAT----CGCCCACAC
ACACACCCCACCACACCGCGCACTGACACAGCAAGATC--------------GACCGATCAGTCAGTCAAGAGGGCGAGG
CGTGCACTGCTGGTCCTCCTCCTCCCTCTCCCGCGCATGGTGCCCCGTCCCCGCCGGCCGGCGCCGACACATGTTGCATG
AGCGGCACGCACCACCCTCCGCGTCCGACGACGAGGACGATGCCCCAGGGGCCAACGACGAGGAGGGCACTCTGGTGACC
A---------GCACCACCAACACCACCTTCCACGACGTGGACGAGGTCATCGAGGTGCGCGAGGTCCGCCCCCTGTCGCC
GCCGCGGCAGCACCCGCCCTTCACGCCGCCCACGCGCACCGTCTCCGCCGCGTCCACCGCCTGGGACAGCGCCAGCAGCC
ACCGCTCCGTCACCTCCGAGGAGCAGTTCATGACGATGAGCCGCGAGTTCACGGCCATGGTCGCCGCCGGCGCCGGCGCC
GGGGCGGCCAACAACAACGCCAACGGCAACAACAGCAACAGCAACCACCCC---GTCGGGCCCTACGACGGCGGGGCCGA
CCAGCTGACCAGCATCGGCGAGGACGAGCTGGAGGAGCACAACCCGCTGGCCATCGTGCCGGACAGCGGCCGCCCCTTCG
CCACGCCGCCCAGCAGGAGCGGCGGCAGCAGCGGCAGGGCGGCGCGGCTCGACCTGGAGGTGGTCCCCGCCGCCGGCCCG
CCGGTGGAGGCGAGCCAGGTGAAGAAGGAGGAGGTGGAGACCAAGGTGTCGGCGTGGCAGACGGCGGAGATCGCCAAGAT
CAACAACCGGTTCAAGCGGGAGGAGGTGGTCATCAACGGCTGGGAGACGGAGCAGGTCGACAAGGCCTCCGCCTGGCTCA
AGAAGATTGAGGTAATGATT--------GAAGAAATTCTCCACTTCCTTTTGCACCTCTTTTCTGATGATGAAAGAAAAA
ATCACTGTGAAATCCTACTTGCTTTGAGCTTAATTTGCCCGAACATACAGAAAACAATTATTTCCTTGCAACCG----AG
AAAACAATTATCCAAGCTTCACAG---TCCTGTCAATTCAAGAAAGAAAAAGAGTAGAGCATGACAAATTAATACAGCAA
CTAAACTGCCCAAAAATATTTTTCCCTGCACAAAATTAGCACTGTTCCCAGACTGGTTAGGTAGACCATCGATGGTTGAT
GCAATCAGCACAAGAGATTTGTGACCACTGATTAGCAAGCTGGGTTTTTTTTTCTCCC---AAATAAAAAGGAAGTTTCT
AGGCCTGGCAACACTAATACAGTACTCCTTTTGAGTAGAATAGTACTAGAGTA---GTTATCTATTCTTGCTTTGAGAAA
AGGTATATGAAATGAACCAATCCCAAATTAGTTAATTAGAGGTGTTACATCAGA--GTGGCTGTCTCAATTGCCCCTTTC
CTTGTGGGTGCGTGCGTGTGAACATCAGTTCGTTTTACAGCTCTCAATCATGCAACTTTCTGCACATAAAGGAGACTACT
GTTTACGTGTGAGATTATCATGGACCGTTAGCACGTTCATCTCAAAGTGATAGGACTATGAGAATGAGAGTGGTGGTCTT
TGTCCGGGGGAACCACTATCGAG---------TTCAGAGTTTTCCTTTAGCTTTTCACA---------------------
----------------------------------------TCTGAATGTTCATCTCGATCACCT----TATGTCTGACTA
TGATGGATCCCACGAAATGGCGGGTGCAGAGGAAGCTGGACGAGCAGCGCGCCAAGGCGGTGGAGAAGACGCAGAACGAC
GTGGCCAAGGCGCGGCACAAGGCGGAGGAGAAGCGGGCGTCGGCGGAGGCCAAGCGGGGGCTCAAGCTGGCCAAGGTGCT
GGAGCTGGCCAACTTCATGAAGGCCGTCGGCAGGGTGCCCACCAAGCGCTCCTTCTTCTAGCCTCCCCCAGCCGGAGGAG
GGGAGA-------AATCC----TATGTGTTTTTGCCTATGGGTAGTACGTAAAAAGTAAGGGCGTGTGCTGCTGCTGCTG
CATCCGATCGGTCGGGAAACCTAATTGTAAAAAGGGATTTGAAAACTTGCTGCTGCTGCTGCTGCCTCCGTTGTATACTA
GCCGCCGGTGG-------TGATCACACGGCGGCGCTTTTTTGTTTGGCTTGTATGTGCACGAAAAAACTGGTGTGAGAAT
GGAATGAATAGCGTGTTTGCTACAAACCTGCAAACATTCAGAGCAATTGTTCGTATGTAGCACTGCTGGTGTGGATCTCT
ACGTTCTTCGGTTCTGTAT-----TATGTATGTATCTGGCTGGAAGTTATCACGGTCCTT-TAACGCCTATCACGAGAGA
C-------GTTGCATCAATGGTCCGGCTGGTGGAGATGATTGTAACCCGTG------CACGTCCAGGATCAGGCAATAAG
ATAACCCT-----------------------------------------------------------------------T
GAAGTGCACTGTGTCCAATCTTGGATTTCTTTAGTTCTGCAGCGACTATTTATTACTATTAGTCTTCCAGCTTCAGAGTC
CGACCTTGGCTTGCGTTTTCTTTTCTTTTTTTGAGATTTTGGAGATATGGCTTGCGTTGTCTGAACTCGAGCTGGCACTT
TTGGCCACAAAAAATAATGGTGATAACTCGAGCCGGGCAC----TGTGCGCCCGTCGAGTACGCATCATGGTGACCGATG
AGGAACCTGCGCCGCACGTCACCGCATTCGCCATTTCCATTTCATTTCCCTCGTGACAAGGCCGGTTAGTGGAATCATCA
TTTTATTCTA-TCTATCGTT-------CTGGATGGCGAAAGCGACCCCGTGCCTGTGATTGACCGACGGGCATAACCCAA
CTAAAGATGGGCCTTGTCTGGCATCGACACGAGGGCGTGGCTGTAGACG------TCGGCACGGCCAGGCACTGCCCG
>SNPs
-SS--SSS-SS----S--------S-----S----------------------S-S-----S-SSSSSS---SSSSSSSS
S--------------------S-------S--S------S----------------------------SS------S---
------------------------------S------S-----S-----S---------------------------S--
----------------------------------S--------------S-------------------S----------
-S-----------------------------------------S--------------------S----------S----
---------------------------------------------------S---S------------------------
------------S-----S--S----S----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------S-------S---SS-------------
------------------S-----------S---------------S-------S----SS-SSSS--------------
--------------------------------------------------------------------------------
-----------------S-S-----------------------------------------------SSSS---------
---------------------S----------------SSSSSSSSSSSSSS------------S---------------
--------------------------------------------------------------------------------
--------------------------------------------------S-----------------------------
--------------------------------------------------------------------------------
-----S--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--S-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------S-------------------------------------S---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------SSSSS-----------S---------------S--------------S---------
--SS-SS------S--S-------------------S-----------------------------------SSSSSS--
----S--S-----------S-----------S-----------S------------S---------------------S-
----------------------S--S------S------S--S-----S-S----SS--------SS-SS--------S-
-S-S---------SSS--------S---------------------------SSS-SSSSS---S-S-S-----------
-----------------------------------------------SS-S--SSS--------------S---------
----------------------------------S----------------S----------------------------
---S----------------------------------------------------------------------------
------------------------S------------SS-S-----------S---S-S---------------------
------S----S-----S--S--SSS-SSSSS---------S-----------------SSSSSSSSSSSSSSSSSSSSS
SSS-----------SS--S-----SS---S----S-SS----SSS-S-SS--SSS-S-S-S-SSSSSS------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------SSSS-SSS
S--------SSS-----------S-S----------S-------------------------------------------
--------------------------------------------------------------------------------
--------S---S--------------------------------------------------------------S----
--------------------------------------------------------S-----------------------
-----------------------------------------------------S--------------------------
------------------------------------------------S----------------------S--------
S-------SSSSSS----S--S-SSSSSS-SSSS-----S----------------------------------------
--------------------------------S---S--------------S--------------------S-------
-SS-----------------------------------------------------------------------------
----------------------------------------SSSS----S-------------------------------
------------------------------------S----------------------S-----S--------------
----------S---------------S---------------------------------------------------S-
SSS----S-------------------------------------------S-SS------S----------------
>forward_238
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------CGTGTCTGTCTTGATCCGCT--
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------
>reverse_2070
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------TGATGGTTGGT
GGACTCAGC-----------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------
>forward_929
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------AGCAAGATCATCGACCGAGC-------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>reverse_2544
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------TACCCTTTCCTCCATGC
TGC-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>forward_2498
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------TT
TGTCCGAGAGAGCCACTG--------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------
>reverse_3842
--------------------------------------------------------------------------------
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-CTAAGACGGGCCTTGTCTGG---------------------------------------------------------
