>input_sequence_43634
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----------------------------------------------------------------------------ATGG
TGGTGTTCAACGACGATGAGAACCCTGCCAGTACCTTGAACAAAGGTACAGTCACTCATTCGGTTAATTTGATACTACAA
GAGTGTTTCTATGAGTAGTG-------------TTTATCATGAATTATATGCGTGCGTGCATGCGATATCGATGCAGGGA
GCACCAAGGGGCTGGTGAAGATCCAAAAGCCCGCGTACAGCAGGGACGACGTGGCGCTGACGGCCGACGAGGTGACGGCG
GTGATAGAGCTGAACGCCGCGCCCAGCGCCGTGGTCAGGGAGGGACTGGACCTTGTGGTGGTGCTGGATGTGAGCGGCAG
CATGCAGGGGGAGCGGCTTGAAAGCATGAAGCAGTCGATGCAGTTCGTGATCATGAAGCTCACCCCCGTGGACCGCCTCT
CCGTCGTCACCTTCTCCAGCCACGCCCAGAGGCTCTGCCCGCTGCGCTCCATGACCGAGTCTGCCCAGAAGGAAGTCAAG
GCCATCATCGACGGCCTCAAGGCCAGTGGAACCACCAACATCAAGAGTGGCCTCGAGATCGCGCGGCAAGTCGTCGCCGA
ACGCTCCACCAAGAAATCCCGCACCGCCAACGTCTTCCTCATGTCCGACGGCGTGCAGAGCGCCGGTGAAGCCACGGACG
TCGATCTTGGCAGTGCCAGCGTCTACACCTTCGGTCTAGGCAAGGACACAGATCACAAGGTACTCCTACGTAGCTACTCT
A-----TCTAGCTA------------AGTCCGAGTGTCCAACGACTAAAGGGGGC-------GATGCTGATGCTGATGAT
ATCTTAATTATTTGATGGCATAAATTGCTAGCTGCTCAACGCCATCGCCAAGAAATCCCCCGGCGGC-ACGTTCAGCACG
GTGCGGGACGGGGCCAACCTCACCAGGCCCTTCTCCCAGATGCTGGGTGGCCTCCTCACCGTGGTGGCGCAGGACGTGAA
GCTCACCCTCACGCCCAAGACGGAGGAGGACGGCCTCAAGGCGATGGTGGTGCCCGCCGACACCGACTACACGCAGACCA
CGGACAGCGCCACCGGCGTCATCACCATCAACTTCGGCACCCTCTTCAGCGGGGAGTCGCGCAAGGTCACCGTCACCATG
ACGCTCTCGGACTGTGCCGCCGGCACCACGCGCCACGACGCGGTCCTGGCCGAGGCTCAGCACAGCTACACCGCCCAGTC
CGTCGTGCACGGCCTCCAGACCCCCGAGAACCTCAAGATCTACCGCACCCAGAACCCGGCCACCGTCGCCGGCAGCAAGG
CGCGCTGGGTGCTGGCCGAGCTGGCGCGGCGGCGCCAGGCCCAGGCCATCAGGGACGCCATGGCTCTGGCGGAAGCCGGC
GACCTTGACGGGGCACGCTACAAGCTTGTGGAAGCGCAGAACGCGCTGGAGGACCTCGTGCTGGACGACGGCCAGAAGCT
CATCGACTCGCTCCGCGCCGAGCTCGCGCAGCTCATCAAGCTCATGGCCACCAAGGAACTCTACGAGGCGCAGGGCCGCC
CCTACGCGCTCGCCTCCGATACCTCCCACGCCCGACAGCGCTACGCCGACAGGGGCGACGAGACCGACGCCGTCCGCCTC
TTCGCCACCGCGCGCATGGACACCTACCTTAAGCAGGCCAAGCAGTTCGACAGTGACCCCACCAAGCCGCTGCCCTCCGC
CGCCGACGATGTCAAGGAAGAGATCGCCGCCAACCCCATGGCCGCCTTCTCCTCCGAGCTCGCCGTATACCTCCAGAAGG
CAATCGAGGCTCTGCAGGCCATCGAGAAGATGATCAA---CCCCACCACCACCGCCTAG---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------
>chr3B_1_TraesCS3B01G577600
TAACCTTTTTCTTCCGAAAA-TAGACTTTTGCCCCGGTTTGTAAATAAAGCGCCAACCACACTATACAGCTGAACGATAA
AAGATAGTGTGGAAGCCTCTTACAAAGCAGATCAAAGGATAAACGGAAAACATAAACACATTGA-AAAAATGCAAAAGTG
CAAAAGATGACATGAATAAGC-GCTGAACAAGAGCGCATGAGGTCCATCAGGAAACGCCACATCACATCTTAGGTCACCT
GAGCTCCACGACAGTGCTCTGAAAGGGAAACGATACAAAGCATCCCCGTCGTCGAGTCCGTAGCGGACACAGGTTTTCAG
CTAGAGCTCTTGCCCGAACAAGATCACCGCAACTACGTCCTTAGGAGAAAAGCGGCACCATTGGGCACCATTACCATTGG
GACCGATACGTGGAGCTTTCGTCAGGTTCTACTACGAGCCACAAGTACCCTAGGACAACAAAACCCTAGAGGGAAGCCCC
GTCGGGACGAATATGGGACCTTTAGAACCAGATCTGGGCGCTGCCACTGTCGCCGGCAGAGAACATGCTAGGGCCACCTG
GCGCAACACCCCGTGCCACCCACACGATGAAGTGGCTCAGTCACCGTCCACACTGTGAAGAGCCTCAGCCACCGCGGCCA
CTCCGAGGCTCGCTGGAGAACCGGCCAACCGAAGCTTGACGAAGAAGTAACTTTTCCATTATTATCAAGTAAAGATATAT
GTGGTGCGTGACACATTAAAGCCGGAAACTGAGAATTATCTGCAGTTGATGTCTAGATGTGTAGCATCTTATGATCGATG
CAGATCCACATCTAGGGACGGCTTCGATTTCATATTATCTAAAAAAAATAGCATCGATACAGGAGACCAGGACAGACTGC
ATCTTAGATATTTATATACATGTAGATGTAGGGAGGTTATATATGCAT------------AGACAGACGGTAACTCAGTG
AGTAAGCTAGCTAGCTGCTA-ACAAACCGGTACACTCTGCCAGCG--------------------GCACGCTCAGGATGG
TGGTGTTCAACGACGATGAGAACCCTGCCAGTACCTTGAACAAAGGTACAGTCACTCATTCGGTTAATTTGATACTACAA
GAGTGTTTCTATGAGTAGTG-------------TTTATCATGAATTATATGCGTGCGTGCATGCGATATCGATGCAGGGA
GCACCAAGGGGCTGGTGAAGATCCAAAAGCCCGCGTACAGCAGGGACGACGTGGCGCTGACGGCCGACGAGGTGACGGCG
GTGATAGAGCTGAACGCCGCGCCCAGCGCCGTGGTCAGGGAGGGACTGGACCTTGTGGTGGTGCTGGATGTGAGCGGCAG
CATGCAGGGGGAGCGGCTTGAAAGCATGAAGCAGTCGATGCAGTTCGTGATCATGAAGCTCACCCCCGTGGACCGCCTCT
CCGTCGTCACCTTCTCCAGCCACGCCCAGAGGCTCTGCCCGCTGCGCTCCATGACCGAGTCTGCCCAGAAGGAAGTCAAG
GCCATCATCGACGGCCTCAAGGCCAGTGGAACCACCAACATCAAGAGTGGCCTCGAGATCGCGCGGCAAGTCGTCGCCGA
ACGCTCCACCAAGAAATCCCGCACCGCCAACGTCTTCCTCATGTCCGACGGCGTGCAGAGCGCCGGTGAAGCCACGGACG
TCGATCTTGGCAGTGCCAGCGTCTACACCTTCGGTCTAGGCAAGGACACAGATCACAAGGTACTCCTACGTAGCTACTCT
A-----TCTAGCTA------------AGTCCGAGTGTCCAACGACTAAAGGGGGC-------GATGCTGATGCTGATGAT
ATCTTAATTATTTGATGGCATAAATTGCTAGCTGCTCAACGCCATCGCCAAGAAATCCCCCGGCGGC-ACGTTCAGCACG
GTGCGGGACGGGGCCAACCTCACCAGGCCCTTCTCCCAGATGCTGGGTGGCCTCCTCACCGTGGTGGCGCAGGACGTGAA
GCTCACCCTCACGCCCAAGACGGAGGAGGACGGCCTCAAGGCGATGGTGGTGCCCGCCGACACCGACTACACGCAGACCA
CGGACAGCGCCACCGGCGTCATCACCATCAACTTCGGCACCCTCTTCAGCGGGGAGTCGCGCAAGGTCACCGTCACCATG
ACGCTCTCGGACTGTGCCGCCGGCACCACGCGCCACGACGCGGTCCTGGCCGAGGCTCAGCACAGCTACACCGCCCAGTC
CGTCGTGCACGGCCTCCAGACCCCCGAGAACCTCAAGATCTACCGCACCCAGAACCCGGCCACCGTCGCCGGCAGCAAGG
CGCGCTGGGTGCTGGCCGAGCTGGCGCGGCGGCGCCAGGCCCAGGCCATCAGGGACGCCATGGCTCTGGCGGAAGCCGGC
GACCTTGACGGGGCACGCTACAAGCTTGTGGAAGCGCAGAACGCGCTGGAGGACCTCGTGCTGGACGACGGCCAGAAGCT
CATCGACTCGCTCCGCGCCGAGCTCGCGCAGCTCATCAAGCTCATGGCCACCAAGGAACTCTACGAGGCGCAGGGCCGCC
CCTACGCGCTCGCCTCCGATACCTCCCACGCCCGACAGCGCTACGCCGACAGGGGCGACGAGACCGACGCCGTCCGCCTC
TTCGCCACCGCGCGCATGGACACCTACCTTAAGCAGGCCAAGCAGTTCGACAGTGACCCCACCAAGCCGCTGCCCTCCGC
CGCCGACGATGTCAAGGAAGAGATCGCCGCCAACCCCATGGCCGCCTTCTCCTCCGAGCTCGCCGTATACCTCCAGAAGG
CAATCGAGGCTCTGCAGGCCATCGAGAAGATGATCAA---CCCCACCACCACCGCCTAGCTAGCTAGCCCATTTCCGCCT
CAGTTTGCTTTCGTATCGTTCCTAGTCTCTCTTTCTCCTGCGCCCGCTGCTTGCTCTAGTTTGATCCTTTGGTTAATTAT
TACTTA----CAGTATCCAATAAGCGCGC-------------CCATTTAGTGCTAGAAAA---------------ATCCA
TTTGTTTCATGATCAACTTGTCAACCCATTTGCTTCAGCGGAATAATTTCAC---TACCATCATCAACCGTGTTTAATTT
CACTTCCCACCCAACCATGCATGGATGTGTTTTCATCCTCTTTTCCTCATTGTCTTTTTTTTAAAAAAAATCAACCAATT
TGTTAAGTTTATCGTTTATGAGTATGTTTTGTTATGCCAGTCCTATTCATTAACACTAACTAAAGTAGAGGCATCAGGAT
TCTCCTCCCCGCCAAAGGCCGCCGGAGAGGAGGCGATTCCACCCGCTCACTGAAGGAACCTGGAGGAGAGAGTTTGGCCT
AGCCGTCAAAGGATATGTGAGGAAAAAGGGAACGGGCCCTCATGACTTTGTTATGGCACATCTAAGTAACGTCATTCCGT
TCGGTTATGTCTGCCGTAAACACCAGTCCTCCATCCTCTTCTACGTTGTAGTATGACTGGACGTTGTGTTAAAAAAACTG
ACTGGATGTTGCTTTTTTTAATAATTTGATTGGATGTTGCTTTTTTTAGACAATCTTGTAAAACTTTATTTAAGTTGTGA
CGATGTTTACAGGGACGAACAGAAGAACACCGGGTTGACCTAAGTAAACACGGCTGTCAACCCCTAAATACAAAACATGC
TTCACTAGATTTTGAGCCTCAAAATTCGAGCTCCTAAACTCATGAACAAAACTACATAAAGTAAAAGTATCAAAGTACTC
TATGATTTCATGTATGCATGGTAGCTCCATAATTTGCCTAGCTTCGAAGCTGTATATCATCTATCCCCATCTTGCAGTCA
GACGTGACATGGTTTGTTCTTTGTTGTCCTTGTTGACTCACATCAAGGCTTTGT
>chr3D_1
TAACCTTTTTCTTCCGAAAAATAGACTTTCGCCCTGGTTTGTAAATAAAACGCCAACCACAGTATACAGCTGAACGATAC
AAGATAGCGTGGAAACTTCTTACAAAGCAGATCAAAGGATAAACAGACAAGATAAATCACATTACAAAAATGCACAAGTA
CAAAAAATGACATGAGTAAGCCGCTGAATAAGAGCACATGAGGTCCATCAGGAAACGCCACACCACATCTTAGGTCACCT
GAGCTCCACGACAGTGCTCTGAGAGGGAAACGATACAAAGCATCCCCGTCGTCGAGTCCGTAGCGGACACAGGTTTTCAG
CTAGAGCTCTTGCTCGAAGAAGATCACCCCAACTACGTCCTTAAGAGAAAAGTGACACCATTGGGCACCGTCGCCGTTAG
GACCGATACGTGGAGCTTTCCTCAGGTTCTACCGCGAGCCACAAGTACCCTAGGACAACAAAACCCTAGAGGGAAGCCCC
GTCGGGACAAATATGGGACCTTCAGAACCAGATCTAGGCGCCACCACTGCCGCCGGCAGAGAACATGCTAGGGCCACCTG
GCGCAACACCCCGTGCCACCCACACGATGAAGAGGCTCAGTCACCGTCCACACTGTGAAGAGCCTCAGCCACCGCGGCCA
CTCCGAGGCTCGCTGGAGAACCGAACAACCGAGGCTTGACGAAGAAGTAACTCTTCCGTTATTATCAAGTAAAGATATAT
GTGGTGTGTGACACATTAGGGCGGGAAACTGAGAATTAGCTGCAGTTGATGTC--------TAGCATCTTATGATCGATG
CAGATCCACATCTAGGGACGGCTTCGATTTCATATTATCTAAAAAAA-TAGCATCGAT--------CCAGGACGGACTAC
ATCATAGATATTTATATAC------ATGTAGGGAGGTTATATATGCATAGACATGTACCAAGACAGACGGTAACTCAGTG
AGTAAGCTAGCTAGCTGCTAAACAAACCGGTACACTCTGCCAGCGGTTTCTAGCAGCTAGCCCTCGCACGCTCAGGA---
TGGTGTTCAACGACGATGAGAATCCTGCCAGTACCTTGAATACAGGTACAGCCA----TTCGGCTAATTTGA---TACAA
GAGTGTTCG-------AGTG-------------CTTATCATGAATTATATGCGTGCATGCATGCGATATCAATGCAGGGA
GCACCAAGGGACTGGTGAAGATCCAAAAGCCAGCGTACAGCAGGGACGACGTGGCGCTGACGGCCGACGAGGTCACGGCG
GTGATCGAGCTGAACGCCGCACCCAGCGCCGTCGTCAGGGAGGGGCTGGACCTTGTGGTGGTGCTGGATGTGAGCGGCAG
CATGCAGGGGGAGAGGCTTGAAAGCATGAAGCAGTCGATGCAGTTCGTGATCATGAAGCTCACCCCCGTGGACCGCCTCT
CCATCGTCACCTTCTCCAGCCACGCCCAAAGGCTCTGCCCGCTGCGCTCCATGACCGAGGCCGCCCAAAAGGAAGTCAAG
GCCATCATCGACGGCCTCAAGGCCAAGGGAACCACCAACATCAAGAGTGGCCTCGAGATCGCGCGGCAAGTCGTCGCCGA
ACGCTCCACCAAGAAATCCCGCACCGCCAACGTCTTCCTCATGTCCGACGGCGTGCAGAGCGCCGGTGAAGCCACGGATG
TCGATCTTGGCAGTGCTAGCGTCTACACCTTCGGTCTCGGCAAGGACACAGATCACAAGGTACG--TACCTAGCTACTCT
ACTATATCTAGCTTTTTTCATTCGATACTCCAAGTGCTCAACGAGTT----------------------ATGCTGATGAT
ATCTTAATTGATGCC--------ATTGCTAGCTGCTCAACGCCATCGCCAAGAAATCCCCCGGCGGC-ACGTTCAGCACG
GTGCGGGACGGGGCCAACCTCACCAGGCCCTTCTCCCAGATGCTGGGTGGCCTCCTCACCGTGGTGGCGCAGGACGTGAA
GCTCACCCTCACGCCCAAGACC---GAGGACGGCCTGAAGGTGATGGTGGTGCCCGCCGACACCGACTACACGCAGACCA
CGGACAGCGCCACCGGCGTCATCACCATCAACTTCGGCACCCTCTTCAGCGGGGAGTCGCGCAAGGTCACCGTCAAGATG
ACGCTCTCGGACTGCGCCGCCGGCACCACGCGCCACGACGCGGTCCTCGCCGAGGCCCAGCACAGCTATACCGCCCAGTC
CGTCGTGCACGGCCTCCAGACCCCCGAGAACCTCAAGATCTACCGCACCCCGAACCCAGCCACCGTCGCCGGCAGCAAGG
CGCGCTGGGTGCTGGCCGAGCTGGCGCGGCGCCGGCAGGCCCAGGCCATCAGGGACGCCATGGCTCTGGCGGAAGCCGGC
GACCTCGACGGCGCACGCTACAGGCTCGTGGAGGCGCAGAACGCGCTGGAGGAGCTCGTGCTGGACGACGGCCAGAAGCT
GCTCGACTCGCTCCGCGCCGAGCTCGTGCAGCTCATCAAGCTCATGGCCACCAAGGATCTCTACGAGGCGCAGGGCCGCC
CCTACGCGCTCGCCTCCGATACCTCCCACGCCCGCCAGCGCTACGCCGACAGGGGCGACGACACGGACGCAGTTCGCCTC
TTCGCCACGGCACGCATGGACACCTACCTTAAGCAGGCTAAGCAGTTCGACAGTGACCCCACCAAGCCGCTGCCCTCCGC
CGCCGACGACGTCAAGGAAGAGATCGCCGCCAACCCCATGGCAGCCTTCTCCTCCGAGCTCGCCGTATACCTCCAGAAGG
CAATCGAGGCTCTGCAGGCCATCGAGAAGATGATCAA---CCCCACCACCACCACCTAGCATG-----CCATTTCCGCCT
CAATTTG-------------CCTAGTCTCTCTCTCTCTCTCCCGCGCTGCTTGCTCTAGTTTATTCCTTTGGTTAATTAT
TACTGTACTTCAGTGTCCAATAAGCGCGG-------------CCTAGTGCT---AGTACTACTATCCAATAGGACATCCA
CTTGTTTCA---TCAACTTGTCAACCCATTTGCTTCAGCGGAATTATTTCACTAGTACCATCATCGACCGTGTTTAATTT
CACTTCCAACCCATGCATGCATGGATGTGTTTTCATCCTCTTTTTCTCATTGT-TTATTTCTTCTTAATTTCAACCAACT
TGTTGATTTTAGTGTTTATGACTATGTTTTGTTATGCCAGTCTTTTAATTAA----------------------------
--------------------------------------------------------------------------------
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>chr7D_983
--------------------------------------------------------------------------------
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-----------------------------------------------------------GCCATCGCAAGCTCAGGA---
TGATGTTCGCCGACGATGAGAACCCTGCTC---CCTTGAACAAAGGTACAGTCA----TTCGGTTTGAT--A---TACAA
GAGTGTTTATAGGAATAATGATCGGATATGTGCCTGATCATGAATTATATGCATGC---------------GTGCAGGGA
GCACCAAGGGGCTAGTAAAGATCAAGAAGCCGGCGTACAGCAGGGACGACGTGTCGCTGAAGGCCGACGAGGTGACGGCG
GTGGTAGAGCTGAACGCCGCGCCCAGCGCCGTGGTGAGGGAGGGGCTGGACCTGGTGGTGGTGCTGGATGTGAGCGGCAG
CATGGCGGCGGAGAAGCTTGTCAGCATGAAGCAGGCGATGCAGTTCGTGATCATGAAGCTCACCCCCGTGGACCGTCTCT
CCATCGTCACCTGCAACAACAGCGCCAAAAGGCACTGCGCGCTGCGCTCCATGACGGTGGATGCCCAGAAGGAGCTCAAG
GCCGTGGTCGACGGCCTGGAGGCCTATGGCGGGACCAACATCAAGAGTGGCCTCGAGACGGCGCGGGCAATCTTCGCCGC
CCGCAACATCGTAAAATCCCGCAGCGCCAACGTCTTCCTCTTGTCCGACGGCCAGCAGACCGCCAACGAAGCCACGGATG
TGGATCTTGGCAGCGCGGGAGTCTACACGTTCGGTCTCGGCAAGGACTCAGATCACAAGG----------TAGTTACTCT
G-----TCTAGCTTTTTGTTCCGATGAAGGTAGCTAAGTCGAACGGCTTAA-GGG-------GATGATGATGCTGATGAT
ATCTTAATTGATGCC--------ATTGCTAGCTGCTCAGCGACATCGCCAAGAAATCCCCCGGCGGG-ACGTTCAGCACC
GTGGTGGACGGGTCGAACCTGACCAAGCCCTTCGCCCAGATGCTGGGTGGCCTCCTCACCGTGGTCGCGCAGGACGTGCG
GCTCATCCTCACACCCAAGAAA---GCGGACGGCCTGAAGGATATGGTGGTGCCCGAAGACACCGACTACACCAAGACCA
CGGACGCCG---CCGGCGTCATCACCATCCACTTCGGCACCCTCTTCAGCGGAGAGTCGCGCAAGGTCACCGTCAAGATG
ACGCTCTCGGAGTGCGCCGTCGGCACGACGCGCCATGACGCGGTCTTGGCCGAGGCCCAACACAGCTACAGCGCCCAGTC
GATTGTGCAGGGTCTCCAAACCCCCGAGAACCTCAAGATCTTCCGCACCCCGAACCCAGCCACCGTCGCCGGCAGCAAGG
CGCGTTGGGTGCTGGCCGAGCTGGCGCGGCGGCGGCAGGCCGAGGCGATCAGGAAGGCCATGGCCCTGGCGGACACCGGT
GACCTCGACGGGGCGCGCTACTTGCTTGTAGACGCGCAGAATGCACTGGAGGACGTCTTGCTGGACGATGGCCAGAAGCT
GATCGACTCGCTCCGCGCCGAGCTCGTGCAGCTCATCAAGCTCATGGCCTCCAAGCAACTCTACGAGGCGCAGGGCCGCC
CCTACGCGCTCGCCTCCGATACCTCCCATGCCCGCCAGCGGTTCGCTGACAGGGGCGACGTCACGGACACCGTCCGCCTC
TTCGCCACGCCGCGCATGGACACGTACCTCGAGCAGGCCAAGCAGTTCGACAAGGACCCCACCAAGCCGCTGCCCTCCGC
CGCCGATGACGTCAAGGAAGAGATCGCCGCCAACCCCATGGCCGCCTTCTCCTCCGAGCTCGCCTTTTACCTCCGGAACG
CAATCGAGGCTCTGCAGGCCATCGAGAAGATGGTCGCCGCCCCCACCGCCACCGCCTAG---G-----CCATTTGTGCCT
CAATTTGCTTTCGTAGTT-------------TCTCTCTCCTGCGCGCTGCTCTAA-TAATTTGTTCCTTTAGTTAATTAC
TC------------ATCCAATAAGCGCGGACGCCCCTAAAATCCTAGTACT---AGTAGTACCATCCAATA-----TCCA
TCTGTTTCA---TCTCCTTGTCAACCCATTTGCTTCACTGGAATAATTTCAC---TACCATCATCGATCCTGTTTAATTT
CACTTCCCCCCA--------------------------------------------------------------------
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>chr7B_983
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-----------------------------------------------------------GCCATCGCAAGCTCAGGA---
TGATGTTCGCCGACGATGAGAACCCTGCTC---CCTTGAATAAAGGTACAGTCA----TGCGGTTTGATAG-----ACAA
GAGTGTTTATAGGAATAATGATCGGATATGTGCATGATCATGAATTATATGCATGC---------------ATGCAGGGA
GCACCAAGGGGCTAGTAAAGATCAAGAAGCCGGCGTACAGCAGGGACGACGTGTCGCTGAAGGCCGACGAGGTGACGGCG
GTGGTAGAGCTGAACGCCGCGCCCAGCGCCGTGGTGAGGGAGGGGCTGGACCTGGTGGTGGTGCTGGATGTGAGCGGCAG
CATGGCGGAGGAGAAGCTCGTCAGCATGAAGCAGGCGATGCAGTTCGTGATCATGAAGCTCACCCCGGTGGACCGTCTCT
CCATCGTCACCTGCAACAACAGCGCCAAACGGCACTGCCCGCTGCGCTCCATGACGGAGGATGCCCAGAAGGACCTCAAG
GCCGTCGTCGACGGCCTGGAGGCCTACGGCGGGTCTAACATCAAGAGTGGTCTCGAGACCGCGCGGGCAATCTTCGACGG
CCGCAAGATCGTAAAATCCCGCAGCGCCAACGTCTTCCTCCTGTCCGACGGTCTGCAGACCGCCAATGAAGCCAGGGAGA
CCGATCTCGGCAGCGCGGGCGTCTACACGTTCGGTCTCGGCAAGGACTCAGATCACCAGG----------TAACTGCTCG
A-----TCTATCTCTGCC------------TAGCAAAGTCCAGCTGTTTAA-GGTGGTGATAGATGATGAAGCTGATGAT
TTATCCCATTT----------------CTAGCTGCTCAACGACATCGCCAAGAAATCCCCCGGCGGGGACGTTCAGTACC
GTGGTGGACGGGTCGAACCTGACCAAGCCATTCGCCCAGATGCTGGGTGGCCTCCTCACCGTGGTCGCGCAGGACGTGCG
GCTCATCCTCACACCCAAGAAA---GCGGACGGCCTGAAGGATATGGTGGTGCCCGAAGACACCGACTACACCAAGACCA
CGGACGCCG---CCGGCGTCATCACCATCCACTTCGGCACCCTCTTCAGCGGAGAGTCGCGCAAGGTCACCGTCAAGATG
ACGCTCTCGGAGTGCGCCGTCGGCACGACGCGGCACGACGCGGTCTTGGCCGAGGCCCAGCACAGCTACAGCGCCCAGTC
GATTGTGCAGGGTCTCCAAACCCCCGAGAACCTCAAGATCTTCCGCACCCCGAACCCAGCCACCGTCGCCGGCAGCAAGG
CGCGTTGGGTGCTGGCCGAGCTGGCGCGGCGGCGGCAGGCTGAGGCGATCAGGAAGGCCATGGCCCTGGCGGACAACGGT
GACCTCGACGGGGCGCGCTACTTGCTTGTAGACGCGCAGAATGCACTGGAGGACGTCTTGCTGGACGACGGCCAGAAGCT
GATCGACTCGCTTCGCGCCGAGCTCGTGCAGCTCATCAAGCTCATGGCCTCCAAGGAGCTCTACGAGGCGCAGGGCCGCC
CCTACGCGCTCGCCTCCGATACCTCCCACGCCCGCCAGCGGTTCGCTGACAGGGGAGACGTCACGGACACCGCCCGCCTC
TTCGCCACGCCGCGCATGGACACCTACCTCGAGCAGGCCAAGCAGTTCGACAAGGACCCCACCAAGCCGCTGCCCTCCGC
CGCCGATGACGTCAAGGAAGAGATCGCCGCCAACCCCATGGCCGCCTTCTCCTCCGAGCTCGCCTTTTACCTCCGGAACG
CAATCGAGGCTCTGCAGGCCATCGAGAAGATGGTAGCCGCCCCCACCGCCACCGCCTAG---G-----CCATTTGTGCCT
CAATTTGCTTTCGTAGTT-------------TCTCTCTCCTGCGCGCTGCTCTAA-TAATTTGTTCCTTTAGTTAATTAC
TCC------------TCCAATAAGCGCGGACGCCCCTAAAATCCTAGTACTGGTAGTACTACCATCCAATA-----TCCA
TCTGTTTCA---TCTACTTGTCAACCCATTTGCTTCACTGGAATAATTTCAC---TACCATCATCGATCCTGTTTAATTT
CACTTCCCCCCA--------------------------------------------------------------------
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>chr5D_1144
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------------------------------------------------------------------------TGCAGGGA
GCAAAGATGGGCTGGTGACCATGGCAATTCCGGCGTACAGCAGGAAAGATGTGGGGCTGACCAAGGATACAGTGACGGCG
ATGGTGGAGATCAGCGCCACATCCTCCGCCGCCATGAGGGAGGGGCTGGACCTGGTGGCGGTGCTGGACGTGAGCGGCAG
CATGGGCGGGGACAAGATCCAGAGCGTGAAGAAGGCCCTGCAGTTCGTCATCATGAAGCTCACCCCCGTGGACCGCCTCT
CCATCGTCACCTTCGACAGCACCGCCCGCAGCCTCAACCCGCTGCGCTCCATGACGCAGGCTGCCCAGACCGACCTCAAG
GCCATCGTCAACCGCCTGGCGGCCGGCGGCGGCACCGACATAAAGGCCGGCCTTGACCTGGGGCTGGCCGTCCTCGGCGG
CCGCGTCCACACCGAATCCCGCACCCCCAACATCTTCCTCATGTCCGACGGGCA---GACCTCCGGTGACCCCAGGCAGG
TCAACCCTGGCGAAGTGGCCGTCTACACCTTCGGT---------------------------------------------
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>SNPs
-----------------------------S----S--------------S-----------S-----------------S
-------S------S-S---------------------------S--S--S-----SSSSS-S-----------S----S
-----S---------S------------S------S--------------------------S-----------------
----------------------S---------------------------------------------------------
-------------S----S---------S--------------S--------S-S--------------S-SS--S--S-
--------------------S-----------SS----------------------------------------------
--------S-------------S------------S-----SS------S------------------------------
--------------------------------S-----------------------------------------------
-----------------------SS-------S-------------------S----S----------------------
------S-----------SS--S---------------S--------------SSSSSSSS-------------------
-----------------------------------------------S----------SSSSSSSS-------S----S-
---S---------------SSSSSS-------------------------------------------------------
-----------------------------------------------------------------------------SSS
------------------------------------------------------SSSS--------------SSS-----
--------S--S--S------------------S----------------------S-------------S---------
-------------------------------S------------------------------------------------
--------------------------------------------S-----------------------------------
-------------S------------------------------------------------------------------
--S-------------------------S------------------------------S--------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------S-
----------------S--------------------S-------------------------SSS---S----------
-------------S-------------S---S----SS------S-SSSSSS--S-----------S-------------
---------S--SSSSSSSSSSS---------------------------------------------------------
--------------------------------------------------------------------------------
---------------------SSSS-----------S----S--------------------------------------
---------------------------------------------------------------------------SS---
--------------S-----------------------------------------S-----------------------
--------------------------------------------------S------S----------------------
----------------------------------S---------------------------------------------
-----S----------------S---------S-----------------------------------------------
S-------------------------S-----------------------------------------------------
----------------------------------S--------------------------S--S---------------
--------S-----------------------------------------------------------------------
---------S----------------------------------------------------------------------
------------------------------------------------------------SS-SSSSS------------
--S------------SSSSS------------S----SSS---S-------------------S----------------
----SS----------------------S---------------SSS--S--S---S-SS--------------------
---------SSS-----------------------------------------------------S--------------
-------------SS-----------------------------S--------S--S---S-SSSS--SS--------S-
----S-S----SS--------S--------------------S-S-SSS-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_421
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-ACCGATACGTGGAGCTTTCG-----------------------------------------------------------
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>reverse_1774
--------------------------------------------------------------------------------
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-------------AAGTCCGAGTGTCCAACGAC-----------------------------------------------
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>forward_879
--------------------------------------------------------------------------------
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-----------------------------------------------------------CAGGAGACCAGGACAGACTG-
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>reverse_1805
--------------------------------------------------------------------------------
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--------------------------------------------CTAAAGGGGGCGATGCTGAT----------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>forward_884
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------GACCAGGACAGACTGC
ATCT----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>reverse_2730
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------TGTCAAGGAAGAGATCGCCG---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>forward_1805
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------AAGTCCGAGTGTCCAACGAC-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>reverse_3450
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------TCTGCCGTAAACACCAGTCC---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
