>input_sequence_43622
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------A
TGGCCACCACTCAAGGTCAGGAGCCACATGTTTTCCAGCTTCC---TTCTTGCGTGATTACTCGGTCGGTTTC----TTG
TGGCGGGAAGAATTGGG-----GAGATGATGGAGAAATTAAGCTTTGCTTGTGGATTGTTTGGGCAGAGGAGCAGAAGAC
GAGCGTCGTCGAGGCCGTGGAGCAGCCTTCCCCCGTGGCGGCGGCGGCGCCGGCGGAGGAGAAGACAAGCGTTAAGGCCG
TGGAGGAGCCTTCCCCGGCGGCTGCGGCGCCGGCGGAGGAGAAGACAAGCGTT---AAGGCCGTGGAGGAGCCTTCCCCG
GCGGCTGCGGCGCCGGCAGAGGAGAAAACAAGCGTTAAGGCCGAGGAGGAGCCTTCCCCGGCGGCTGCGGCGGCGGAGGG
GCAGCGGCGGCCGCCTGCGGCTACGGCGGCGCGCCGGGCGGGTGCTCCGGCCAGCCCCTTCGACTTCTCCACCATGATGA
ACTTGCTCAACGTAATCAAAGCTACA------CTGAAGCATTTTACAGTTTCTGCAGAATTTGCAATACTCTGTTTTGCT
CTGCTCATTTCAAGCATGAGATA------------------------CAAA-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------TTTGAATCGGTTGATAATTTGCTTCGATTTCACGGA
G--------------------CAAATTTGAATCCTGAATTTTGTGGCATGGCGTGCACTGCAGGACCCGAGCATCAAGGA
GATGGCGGAGCAGATCGCCAAGGACCCGTCATTCAGCGAGATGGCGGAGCAGCTGCAGAAGACGGTGGCGC---------
------CGGCGCCGGCGGCGTCGGCGTCCGCGCGGTCGCCGCAGGAGGTGGCGGCGGCGCTGGACCCGCAGAAGTACGTG
TCGACGATGCAGCAGCTGATGCAGAACCCGCAGTTCGTGGCCATGGCGGAGCGGCTGGGCAGCGCGCTGATGCAGGACCC
GGCCATGTCCTCCGTCCTGGGCGGCCTCACCAACCCCGCCCAGAAGGAGCAGCTCGAGGCCCGCGTCGCCCGCATGAAGG
ACGACCCCTCCCTCAAGCCCATCCTCGACGAGATCGAGTCCGGCGGCCCCGCCGCCATGATGAAGTAACCACCTCCTGAC
CTTCTCGCCGCTCTCCGGCCGCCTCAACATTCCTTCCGCGTACGGCATCGTCAATGGCGGTCGACCAATCTTGACACCGT
TTGGTTTTCAATTCAGGTACTGGAACGACCCGGAGGCGCTGCAGAAGTTCGGCCGCGCAATGGGGGTGGGTCCATCCGGC
GCCGCCGCCGGAGCTGAAGCCGAGGCAGAGGAGGAGGAGGAGGTTGTTGCCGGCGAGGAAGGTGAGTACGAGGAGGAGTC
TATCATCCACCAGACGGCGAGCGTGGGCGACGTGGAGGGGCTGAAGAAGGCGCTGGCCGACGGCGTGGACAAGGACGAGG
AGGACTCGGAGGGGCGGCGGGGGCTGCACTTCGCGTGCGGCTACGGCGAGCTCGGGTGCGCGCAGGCGCTGCTGGAGGCC
GGCGCCGCCGCGGACGCCGTGGACAAGAACAAGAACACCGCGCTCCACTACGCCGCCGGCTACGGCCGCAAGGAGTGCGT
GGCGCTGCTCGTCGACCACGGCGCCTCCGTGTGAGTAGCCGTCG-------------ATCTCATCTCCCGCGCCGCCGCC
ATGCATGATCACATCACCTGCTTCTGCTTGCTCGCTGACATAGTAATCTAAGTAC----TGACGATGGAGCTCGATCATG
GTGG-----AAATGCAGGACGCTGCAGAACCTGGACGGGAAGACGGCCATCGACGTGGCGAGGCTCAACAGCCAGGAGGA
GGTGCTCAAGCTGCTGGAGAAGCACGCCTACGTCTAG-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---
>chr4A_1_TraesCS4A01G328600
TGTTGATGACAACCGGGAAGCAGTGACGAATCAACTGGATGGGCTTTAATAGGCTTGAGCCTGCCCTCCAGCAATGCAAA
AAAGAAATTAGTAGTTAATAGTATACGTTCCCAGTAGTATTATGGCAATTCTAACCTTCTTTCAACAAAAGAATTGAGAG
TTGGTGGTTTTG--TTTTCACACCGTTAACTTTGAGCCCGTCCTTGATTTTCCTTCAAGATTCGCCACTGCCGAGAAGTC
TTCATGCACGTGCCCCTAAGGGCCAATGCTCTAGAGAGGTAGTTGCCGCCAT--------TGAATCATTCTATAGTGCCT
AAACCAGCTCTCGCCGCCGCGCGCATATGGCGAGACACCCTAACCCAGCCGCCGGAGTGGCAGGCAGAGGGGAGGAGAAT
CCAGGAGGTGG------------CCGATGGAGCTATGAGGGGAGGAGAACTTTGCTGTAGCCCCCTTAGCTCGAGGGAAA
GGAAAATCCCATTTC-GTGTTGTCTTGTTTGCCATAATTTTTAAATACCTTCTTTATAAACTTCTATAAGACATTTTTAG
GTCATGAGGTTTTTCC----GAGTCGCTTGAGAAATAAGAAAGCAATTCGTTTTCGACTCGGCAATATGAAAGCCAGCCC
GGTTTGGTTTATGCGGCAA-TATGAAAGCATGATTTTCTTTATAATCTCATGGAATGCATAGAAATAAGTTCTT-TTCTT
GTGGTAAGTAAACATTCTTGCCTTTGAGGTCTCACACCTGGCACCTTCCAGAAAGATCTACTGTTGTTGTAAATCAAAGT
GATGTGTCCAAACATTAGTCGGCCAAGCGTTCCTATATAAACCGCCGGGC-GAAAAATACACCGGGAAAAGGAGACCGGC
TGGTTGGCTTTGGTTGGTTGG------TCGCACTCTCTCCTCTCCATCCAT---CACCACCACCTTATCATCTTCCCCAT
CATCGTCATCCTCTCCACCACCGTCTGCGTGAGCACAGTGCCAACGCCGGCGTCGTCTCCACTGCCGCCGTCGCTCGACA
TGGCCACCACTCAAGGTCAGGAGCCACATGTTTTCCAGCTTCC---TTCTTGCGTGATTACTCGGTCGGTTTC----TTG
TGGCGGGAAGAATTGGG-----GAGATGATGGAGAAATTAAGCTTTGCTTGTGGATTGTTTGGGCAGAGGAGCAGAAGAC
GAGCGTCGTCGAGGCCGTGGAGCAGCCTTCCCCCGTGGCGGCGGCGGCGCCGGCGGAGGAGAAGACAAGCGTTAAGGCCG
TGGAGGAGCCTTCCCCGGCGGCTGCGGCGCCGGCGGAGGAGAAGACAAGCGTT---AAGGCCGTGGAGGAGCCTTCCCCG
GCGGCTGCGGCGCCGGCAGAGGAGAAAACAAGCGTTAAGGCCGAGGAGGAGCCTTCCCCGGCGGCTGCGGCGGCGGAGGG
GCAGCGGCGGCCGCCTGCGGCTACGGCGGCGCGCCGGGCGGGTGCTCCGGCCAGCCCCTTCGACTTCTCCACCATGATGA
ACTTGCTCAACGTAATCAAAGCTACA------CTGAAGCATTTTACAGTTTCTGCAGAATTTGCAATACTCTGTTTTGCT
CTGCTCATTTCAAGCATGAGATA------------------------CAAA-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------TTTGAATCGGTTGATAATTTGCTTCGATTTCACGGA
G--------------------CAAATTTGAATCCTGAATTTTGTGGCATGGCGTGCACTGCAGGACCCGAGCATCAAGGA
GATGGCGGAGCAGATCGCCAAGGACCCGTCATTCAGCGAGATGGCGGAGCAGCTGCAGAAGACGGTGGCGC---------
------CGGCGCCGGCGGCGTCGGCGTCCGCGCGGTCGCCGCAGGAGGTGGCGGCGGCGCTGGACCCGCAGAAGTACGTG
TCGACGATGCAGCAGCTGATGCAGAACCCGCAGTTCGTGGCCATGGCGGAGCGGCTGGGCAGCGCGCTGATGCAGGACCC
GGCCATGTCCTCCGTCCTGGGCGGCCTCACCAACCCCGCCCAGAAGGAGCAGCTCGAGGCCCGCGTCGCCCGCATGAAGG
ACGACCCCTCCCTCAAGCCCATCCTCGACGAGATCGAGTCCGGCGGCCCCGCCGCCATGATGAAGTAACCACCTCCTGAC
CTTCTCGCCGCTCTCCGGCCGCCTCAACATTCCTTCCGCGTACGGCATCGTCAATGGCGGTCGACCAATCTTGACACCGT
TTGGTTTTCAATTCAGGTACTGGAACGACCCGGAGGCGCTGCAGAAGTTCGGCCGCGCAATGGGGGTGGGTCCATCCGGC
GCCGCCGCCGGAGCTGAAGCCGAGGCAGAGGAGGAGGAGGAGGTTGTTGCCGGCGAGGAAGGTGAGTACGAGGAGGAGTC
TATCATCCACCAGACGGCGAGCGTGGGCGACGTGGAGGGGCTGAAGAAGGCGCTGGCCGACGGCGTGGACAAGGACGAGG
AGGACTCGGAGGGGCGGCGGGGGCTGCACTTCGCGTGCGGCTACGGCGAGCTCGGGTGCGCGCAGGCGCTGCTGGAGGCC
GGCGCCGCCGCGGACGCCGTGGACAAGAACAAGAACACCGCGCTCCACTACGCCGCCGGCTACGGCCGCAAGGAGTGCGT
GGCGCTGCTCGTCGACCACGGCGCCTCCGTGTGAGTAGCCGTCG-------------ATCTCATCTCCCGCGCCGCCGCC
ATGCATGATCACATCACCTGCTTCTGCTTGCTCGCTGACATAGTAATCTAAGTAC----TGACGATGGAGCTCGATCATG
GTGG-----AAATGCAGGACGCTGCAGAACCTGGACGGGAAGACGGCCATCGACGTGGCGAGGCTCAACAGCCAGGAGGA
GGTGCTCAAGCTGCTGGAGAAGCACGCCTACGTCTAGACGCCGTCGCCTCTCTGCATACGCCATGCCAT-------CATC
AGTCGATCTTGCCTTCAGTTTGCTTAATTTTATTATTA---TTTCAGATTATGCTTAT----TACAATATTTTCCATGGA
AGA---AAAAAAGGGTCTCTCTTCGGCTGTAATTCATATTTCATCCATCTGTAT----CTATTGAGTG----TGGGTAGA
ATTTATCTGGTTTCTGGATTATTTATTATCGATTTTGCATTTTGCTGGTCGTTTCAAAGTTTTGCTTCGTGAATAAAGAA
ATAAAATTCATGTTTCATAGTTTATCTTGGGCTACATAG-----------------------------------------
-----------------------------------------------------------TTTCTGTGCTTGCATTTTTAC
CTTTTGTTTTCGTTACA-TTTTTAATTTATTTAGCAATCTTGGTGCCTGTGAAACCACTATCTGACGTGTCATCTAATAT
ATCATCCAGATGGTTTATGTGGCGG------TACGATTACCGCGATCCTTGTATCTTTTGACTGCCTTGCT--------T
AATAATATAAAGCGAGACAAAAACCTATTTCATAAAAAATCAGT------------------------------------
--------------------------------------------------------------------ACGATTGTACAC
GACGTCTTTTAAAGTTCAATAACCACATCTGAACTATGATAATAGTCGAGTACATGTCCTTATATAGGATGCACAACCCG
GTTATGAGATGTAGCTTGCACTTGTAGCTGTCTGCTTAATTTGAGAATTTTGGGACCAAGATGCCTGGATTCAAGCTTGT
GGTGCAAAAAGCTTGGAATGAAGCTTCCACCCAACCTGGTCCTTGCCAGCTTCTTTTTCACAAGCTCAAGAAGACTAGCC
AGCGGCTTCGTGCTTGGAGCAAAACCATCTTCTCCAACACTAGTGCAGCTGCG--CATGGCTCTTGAGGTCATCCTTTGC
TTCGATATGGCCCAACAAAAAAAAAAGAGTGCTTTTATATGGATGAGCGGGATCTCAAGAAAAGACTCGAAAGAAGAGTG
CTTGGTTTAGCCATTTTTAAGAGTGCTTGTAATGGGCAATGCTTCAGAATTATTAATCTGAAGAAGGGCGACGCAAACAC
TAA
>chr5B_127
--------------------------------------------------------------------------------
----------------------------------------------AATTCTAACCTTCTTTCAACAAAAGAATTGAGAG
TTAATGGCTTTCCTTTTTCACACCGTTAACTTTGAGTCTGTCCTTGATTTTCATTCAAGATTCTCCACTGCCGGGAAATC
TTCATGCACGTACCCCTAAAAGCCAGTGCTATGGAGAGGTAGTCGCTGCCATTAAATCCTTGAATCATTATGTAGTGCTT
AAATCAGCTCTCACCGCCGCGCACACATGGCGAGACACCCTAACCCAGCTGCCGGAGTGGCGGGTAG-----------AT
CCAGGATGTGG------------CCGATGGAGCTATGAGGGGAGCAGAACTTTGCCTTAGCCGCCTTAGCTCAAGGGAAA
GGAAAAATCCCATTTTGCGTTGTCTTGTCTGCCATAATTTTTAAATACCTTCTTTATAAACTTTTATAAGACGTTTTTAG
GCCATTAGGTTTTTTTTTTTGAGTCGCTTGAGAAACAAGAAAGCCAATCGTTTTCTCCTAGGCAATATGAA----AGCCC
GGTTTGGTTTATGCGGCAAATATGAAAGCATGATTTTCTTTATGATCTCGTAGAATGCATAGAAACAACTTA-T-TTCAT
GTGGTAAATGAACATTCTTACCTTTGGGGTCTCACACCTGGCACCTTCCAGAAAGATCTACTGTTGTTGTAAACCAAAGT
GATGTGTCCAAACATTAGTCGGCCAAGCGTTGCTATATAACCCGCCGGGAGAAAAAATACGCCGGGAAAAGGAGACCGGC
CGGTTGGGTTTGGTTGGTTGGTCGCACTCGCACTCCCTCCTCTCCATCCATCGCCACCACCACCTTATCATCTTCCCCAT
CATCGTCATCCTCAGTTCCTCACAACACCCACT--------CAACGCCGGCGTCGTCTTCACTGCCGTCGCCGCTCGACA
TGGCCACCACTCAAGGTCAGGAGCCACGCGTTTCGCTGCTTCGTTGTTCTTGCGTGGTTACTCGGTCGGTTTCTTGTTTG
TGGCGGGAAGAATTGGATTAGAGAGATGATGGGGAAATTAAGCTTTGCTTGTGGATTGTTTGGGCAGAGGCGGAGAAGAC
GAGCGTCGTCGAGGCCGTGGAGGAGGCTTCCCCGG---------------------------------------------
---------------CGGCGGCTGCGGCGCCGGCGGAGGAGAAGACGAGCGTC---AAGGCCGTGCAGGAGCCTTCCCCG
GCGGCTGCGGCGCCGGCGGAGGAGAAGACAAGCGTTAAGGCCGAGGAGGAGCCTTCCCCGGCGGCTGCGGCAGCGGAGGG
GCAGCGGCGGCCGCCTGCGGCTACGGCGGCGCGCAGGGCGGGTGCTCCGGCCAGCCCATTCGACTTCTCCACCATGATGA
ACTTGCTCAACGTAATCAAGCTCTCA------CTGAAGCATTTTACAGTTTCTGCAGAATTATCAATGCTCCGTTTTGCT
CTGTTCATTTCAAGCATGAGAGTTC----TTGGAAGATTTATGTTTACAAGTTTGAATCAATATTTTAAATAGCGCGCTA
CAAAATATAGCGAGGCCCTTCTCTAAACGCTACACGAGTTATAGCGTGCTAATAGCGTGCTATATTTCAAAATAGCGTTT
GCAAAAAAAATCAAATATATCTAAAAATAAAGTATTTAAGCAACTAAATTTTTCATAGGAGCAAGCAATATATGCATCTG
ATAAAAGGAGTAAGAAAGCTAGTGGGAGAATCTGATAAAAGGAGTGAGAAAGCTAGTGATCGTGGGTTGATTTTGGCCTG
CTGGGCCAGCTGGGTTGTGCTTATTTCAGTTTTGCATGGTCTGCGCGTTATAACGTTACAACGTTACAACGTTATAGCGT
GTGTAGCGCGCTAATTACGCGTTTAGCGCCATAGCGTCCGATTTTGCCAAAACGTAACGTCTCCCTTCCAAATATGCTAT
AACCGCATTATAACGGCGAAATAGCGTGCTATTTAAAATATTGGTTTGAATCGGTTGCTAATTTGCTTCGATTTCACTGA
AGAAATTTGGGATCATTTTAACAAATTTGAATCCTGAATTTTGTGGCGTGGCGTGCACTGCAGGACCCGAGCATCAAGGA
GATGGCGGAGCAGATCGCCAAGGACCCGTCCTTCAGCGAGATGGCGGAGCAGCTGCAGAAGACGGTGGCGC---------
------CGGCGCCGGCG---------------CGCTCGCCGCAGGAGGTGGCGGCCGCGCTGGACCCGCAGAAGTACGTG
TCGACGATGCAGCAGCTGATGCAGAACCCGCAGTTCGTGGCCATGGCGGAGCGGCTGGGCAGCGCGCTGATGCAGGACCC
GGCCATGTCCTCCGTCCTGGGCGGCCTCACCAACCCCGCCCACAAGGAGCAGCTCCAGGCCCGCGTCGCCCGCATGAAGG
ACGACCCCTCCCTCAAGCCCATCCTCGACGAGATCGAGTCCGGCGGCCCCGCCGCCATGATGAAGTAACCGCCTCCTTCT
CTCCGGCATCAATGGCGAT-------------------------------------GCGGTCGATCAATCTTGATATCGC
TTGGTATTCTG-TCAGGTACTGGAACGACCCGGAGGCGCTGCAGAAGTTCGGCCGCGCGATGGGCGTGGGCCCGTCGGGC
GCCGCCGCCGGAGCTGAAGCCGAGGCAGAGGAGGAGGAAGAGGTTGCTGCCGGCGAGGAAGGGGAGTACGAGGAGGAGTC
TATCATCCACCAGACGGCGAGCGTGGGCGACGTGGAGGGGCTGAAGAAGGCGCTGGCGGAGGGCGTGGACAAGGACGAGG
AGGACTCGGAGGGGCGGCGGGGGCTGCACTTCGCGTGCGGCTACGGCGAGCTCGGGTGCGCGCAGGCGCTGCTGGAGGCC
GGCGCCGCCGCGGACGCCGTGGACAAGAACAAGAACACCGCGCTCCACTACGCCGCCGGCTACGGCCGCCAGGAGTGCGT
CGCGCTGCTCGTCGACCACGGCGCCTCCGTGTGAGTACTGCGTAGCCATCGCATCCCATCTCATCTCCCGCGCCGCCGCC
ATGCATGATCGCATCAC------CTGCTTGCTCGCTGACATAGTAATCTAAGTACATACTGACGACGGAGCTCGATCATG
GCGGAATGAAAATGCAGGACGCTGCAGAACCTGGACGGGAAGACGGCCATCGACGTGGCGAGGCTCAACAGCCAGGAGGA
GGTGCTCAAGCTGCTGGAGAAGCACGCCTACGTCTAGACGCCGTCGCCG------------------TCGCCATGCCATC
AGTCGATCTCG----CAGTTTGCTTAAATTTATTATTATTGTTTCAGATTATGCTTATAAATTATTATCTTTTCCATGGA
AGAAAGAAAAAAGGGTTTCTCTTCGGCTGTAATTCATATTTCATCGATCTGTATGTATCTATTGAGTGTGTCTGGGTAGA
ATTTATCTGGTTTCTGGATTATTTATTATCGATTTTGCATTTTGCTGGTCGTTTCAAAGTTTTGCTTCGTGAATAAAGAA
ATAAAATTTATGTTCCATAGTTTATCTTGGGCTGCCACCTCGCGTCAAACTAAAGTTGCCATGAAAAACGTTCGTGTTGC
CATGCTTAAAATCCGAATGTTCGGTATTTACCATCTTCGTGGTTTATTTCGTAAGAGTATTTCTGTGCTTGCATCTT-AC
CTTTTGTATCTCTAACATTTTTTAACTGATTTAGCAATCATGGTGCCTGTGAAACCACTATATGTTGTGTCATCTAATAC
--CATCCAGATGGTTTATGTGGCGAAGTCTATACGATTGCGGCAAGCCTTGTATCTTTGGACCGCGGTTACTTTATTAAT
AATAATGTAAAGCGAGATGAAAGTCTATTTCAGAAAAAATCATT------------------------------------
--------------------------------------------------------------------ACGATTATAGAC
AAGATTTTTTAAAGTTTAGTAACAAAATCTAAACTATGGTAGTATTCGAGTACACGTCCTTATATAGGACAT--AAACCG
GCTATGAGATGCAACTTACACTTATAGCTATCTAC----TTTGAGAATCTTTGGACCAAGAAGCCTCAATTCAAGCTTGT
GGTGCAAAAAGCTTGGAATGAAGCTTCCACCCACTCCGGTCCTTCTGGGCTTCTTTTTCACAAGCTCAAGA-GACTAGCC
AGCGGCATCGCGCTTGGAGCAAAACCATCTTCTCCAACATCATGGTTTAGGTGCACATGGCTCTCGAGGCCATCCTTCGC
CTTGATGCGGCCCAA----GAAAATAGAGTGTTTTTTTGTTGATAAGTGGGATCTCAAGAAAAGACTCAAAAGAAGAGTG
CTTGGTTTAACCACTTTCAAGAGTGCTTGCAAGGGGCAATGCTCCAGAATTACCAATCTGAACGAGGG------------
---
>chr5D_304
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------AGTGCCT
CAACCAGCTCTCGCCGCCGCGCACATATGGCGAGACAACCTAACCCAGCCGCCGGAGTGGCAGGCAG-----------AG
GGGAGGAGAATCCAAGAGGTGGCCCGATGGAGCTATGAGGGGAGCACAACTTTGCCCTAGCCGCCTTAGCTCAAGGGAAA
GGAAAATTCCATTTTTGTGCTGTCTTGTCTGCCATAATTTTTAAATACCTCCTTTATAAATTTTTATAAGACGTTTTTAG
G-----------TTTTTTTTGTGTCGCTTGAGAAACAAGAAAACCATTCGTTTTCTCCTAGGCAATATGAA----AGCCC
GGTTTGGTTTATGCGGCAAATATGAAAGCGGAGTTTTCTTTATGATCTCATAGAATGCATGGAAACAACTTA-TTTTCCT
GTGGTAAATGAACATTCTTAGC-TTGAGGTCTCACACCTGGCACCTTCCAGAAAGATCTACTGTTGTTGTAAATCAAAGT
GATGTGTCAAAATTTTAGTCGGCCAAGCGTTGCTATATAAACCGCCGGGAGGAAAAATACACCGGGAAAAGGAGACCGTC
TGGTTGGCTTTGGTTGGTTGG------TCGCACTCCCTCCTCTCCATCCATCG---CCACCACCTTATCATCTTCCCCAT
CATCGTCATCCTCACCACCACCGTCTGCGTGAGCACAGCACCAACGCCGGCGT---------------CGTCGCTCGACA
TGGCCACTACTCAAGGTTAGGAGCCGCATATTCTCCTGCTTCC---TTCTTG---------------GGTTTC----TTG
TGGCGGGAAGAATTGGG-----GAGATGATGGAGAAATCTTGC-TTGCTTGTGGATTGTTTGGGCAGAGGCGGAGAAGAC
GAGCGTCGTCGAGGCCGTGGAGCAGCCTTCCCCCA---------------------------------------------
------------------CGTCGGCGGCCCCGGCAGAGGAGAAGACGAGCGTCGTCAAGGCGGAGGAGGAGCCTTCCCCG
GCGGCGGCGGCGCCGGCAGAGGAGAAAACAAGCGTTAAGGCCGAGGAGGAGCCTTCTCCGGCGGCTGCGGCGGCGGAGGG
GCAGCGGCGGCCGCCTGCGGCTACGGCGGCGCGCAGGGCGGGTGCTCCGGCCAGCCCCTTCGACTTCTCCACCATGATGA
ACTTGCTCAACGTAATCAAGCTACACTGAATTCTGAAGCATTTG-CAGTTTCTGCAAAATTAGCAATACTCTGTTTTGCT
CTGTTCGTTTCAAATAGTATGAGATTTCTTTGGAAGATTTATGTATGCAAA-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------TTTGAATCGGTTGTTAATTTGCTTCGATTTCACGGA
AGAAACTTG--------------------AATCCTGAATTTTGTGGCGTGCCGTGCACTGTAGGACCCGAGCATCAAGGA
GATGGCGGAGCAGATCGCCAAGGACCCGTCATTCAGCGAGATGGCGGAGCAGCTGCAGAAGACGGTGGCGCCGGCGCCGG
CGTCGTCGGCGACGGCC---------------CGGTCGCCGCAGGAGGTGGCGGCGGCGCTGGACCCGCAGAAGTACGTG
TCGACGATGCAGCAGCTGATGCAGAACCCGCAGTTCGTGGCCATGGCGGAGCGGCTGGGCAGCGCGCTGATGCAGGACCC
GGCCATGTCCTCCGTCCTCGGTGGCCTCACCAACCCCGCCCAGAAGGAGCAGCTCGAGGCCCGCGTCGCCCGCATGAAGG
ACGACCCCTCCCTCAAGCCCATCCTCGACGAGATCGAGTCCGGCGGCCCCGCCGCCATGATGAAGTACGCTCCTGAACAT
CTTCATTTCA-----------------------TTCCTCCGGCGACGACATTAACGGCGACCGGTCGATCTTTCTG----
---------AATTCAGGTACTGGAACGACCCGGAGGCGCTGCAGAAGTTCGGCCGCGCGATGGGCGTGGGCCCGTCGGGC
GCCGCCGCCGGAGCCGGAACCGAAGCAGAGGAGGAGGAAGAAGTTGTTGCCGGCGAGGAAGGGGAGTACGAGGAGGAATC
TATCATCCACCAGACGGCGAGCGTGGGCGACGTGGAGGGGCTGAAGAAGGCGCTGGCCGATGGCGTGGACAAGGACGAGG
AGGACTCGGAGGGGCGGCGGGGGCTGCACTTCGCGTGCGGCTACGGCGAGCTCGGGTGCGCGCAGGCGCTGCTGGAGGCC
GGCGCCGCCGCGGACGCCGTGGACAAGAACAAGAACACCGCGCTCCACTACGCCGCCGGCTACGGCCGCAAGGAGTGCGT
CGCGCTGCTCGTCGACCACGGCGCCTCCGTGTGAGTAGCCGTCG------------CATCTCATCTCCCGCGCCGCCGCC
ATGCATGATCGCATCAC------CTGCTTGCTCGCTGACGTAGTAATCTAAGTACGTACTGACGATGGAGCTCGATCATG
GTGG-----AAATGCAGGACGCTGCAGAACCTGGACGGGAAGACGGCCATCGACGTGGCGAGGCTCAACAGCCAGGAGGA
GGTGCTCAAGCTGCTGGAGAAGCACGCATACGTCTAGACGCCGTCGCCGTCGCCATCGCCATCGCCATCGCCATGCCATC
AGTCGATCTTGCCTTCAGTTTGCTTAATTTTATTATTA---TTTCAGATTATGCTTAT----TATAATATTTTCCATGGA
AGA---AAAAAAGGCTCTCTCTTCGGCTGTAATTCATATTTCATCGATCTGTAT----CTATTGAGTG----TGGGTAGA
ATTTATCTGGTTTCTGGATTGTTTATTATCGATTTTGCATTTTGCTGGTCGTTTCAAAGTTTTGCTTCGTGAATAAAGAA
ATAAAATTTATGTTCCATAATTTATCTTGGGCTGCCACCTCGCGTCAAACTAAAGTTGCCATGAAAAACGTTCGTGTTGC
CATGCTTAAAATCCGAATGTTCGGTATTTACCATCTTCGTGGTTTATTTCGTAAGCGTATTTCTGTGCTTGCATCTT-AC
CTTTTGTTTCTCTGACATTTTTTAACTGATTTAGCAATCATGATGCCTGTGAAACCACTATATGTTGTGTCATCTAATAC
--CATCCAGATGGTTTATGTGGCGAAGTCTATACGATTGCGGCGAGCCTTATATCTTTGGACAGCGGTTACTTTATTAAT
AATAATGTAAAGCGAGATGAAAGTCTATTTCGTAAAAAATCATTACAATTATAGACAAGATTTTTTAAAGTTTAGTAACA
AAATCTAAACTATGGTAATATTCGAGTATATGTCCTTATATAGGACATAAACCGGCTATGAGATCATTACGATTATAGAC
AAGATTTTTTAAAGTTTAGTAACAAAATCTAAACTATGGTAATATTCGAGTATATGTCCTTATATAGGACAT--AAACCG
GCTATGAGATGCAGCTTACACTTATAGCTATCTAC----TTTGAGAATCTTTGGACCAAGAAGCCTCAATTCAAGCTTGT
GGTGCAAAAAGCTTGGAATGAAGCTTCCACCCACTCCGGTCCTTCTGGGCTTCTTTTTCACAAGCTCAAGA-GACTAGCC
AGCGGCATCGCGCTTGGAGCAAAACCATCTTCTCCAACACCATGGTTTAGGTGCACATGGCTCTCGAGGCCATCCTTCGC
CTTGATGTGGCCCAA----AAAAATAGAGTGTTTTTTGC-TGATAAGTGGGATCTCAAGAAAAAACTCAAAAGAAGAGTG
CTTGGTTTAACCACTTTCAAGAGTGCTTGCAAGGGGCAATGCTCCAGAATTACCAATCTGAA------------------
---
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------------------
--SS---S---S------------------------S-S-------------S----------S---------S---S--
-----------S-------SS----S----S-S----------S--S----------------------S-S--------
----------------------S--------------------------------------------SSSSSSSSSSS--
------S-------------------------------------S----------SS-----S---------S-------
-------S------S-------------S----------------------------------S--------S-------
-S---S--------SS-------------------S--------S----------SS--S-----------SSSS-----
-------------------------------------------S-------S-------------S--S--SS-----S-
-------S-S---------S------------------------------------------------------------
-------------------------------S-----------------S------------------------------
-----------------------------------S--------------------------------------------
-------------S------------------------SS------------------S--------S------------
------------------------------------S-------------------S-----------------------
----------------------------------------------------------------------S-S-------
-----------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSS-------------------------------S-----S---------------------------
--------------------------------------------------------------------------------
----------------------------------S---------------------------------------------
-------------------SSSSS-------------------------------------S------------------
---S-----------------SS---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------S----------------------
S----------------------------------------------S--------------------------------
--------------------------------------------------------------------------------
-----------------SSSSSSSSSSSSSSS------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------S------S-S
----SSSS-SSSSSS--SSSSSSSSSSSSSSSS----S-SSS--S-SS-S-S--S---------S---------S-S--S
-----S----------------------------------------------------S-----S-----S--S--S---
--------------------------------------S-----------------------S-----------------
------------------------------------------------------------S-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
S-------------------------------------------------------------------------------
----------S------SSSSSS---------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------SSSSSSSSSS-SSSSSS-SSS-----------
----------------------------------------------------------------S---------------
---------------------------------------------S----------------------------------
--------------------------------------------------------------------------------
--------S-----S------------------S-SSSS-----------------------------------------
--------------------------------------------------------------------------S--S--
---------SSS-S-----------S-S-----------S---------------------S--SS-------------S
SS----------------------S-------------S-S----S------------S---S--SS-SSS---------
------S----------SS---SS------------------S-------------------------------------
--------------------------------------------------------------------------S--S--
S-SS-S----------S-S----S-S----S-------S-----S------------------------SSSSS--S---
-S---------S-----S-----S-----S---S-SSSS---------S--S---------S----SS------------
---------------------------------SS-S-------SSSS-----------------------S--------
------S---S-----------------------------S-SS-SSSSS-S------------S----S-------S--
S-S---S--------SSSS-----S------S----S-S-S---S--S--------------------S-----------
---------S---S---S-----------S--S----------S--------SS--------SS----SSSSSSSSSSSS
SSS
>forward_82
--------------------------------------------------------------GCCCTCCAGCAATGCAAA
AA------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---
>reverse_1254
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------CGGAGGAGAAGACAAGCGTT-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---
>forward_832
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------CATTAGTCGGCCAAGCGTTC------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---
>reverse_3222
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------TTCTGCTTGCTCGCTGACAT---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---
>forward_1273
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------CGGAGGAGAAGACAAGCGTT-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---
>reverse_3880
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------TTGGTGCCTGTGAAACCACT---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---
