>input_sequence_43607
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---------------------------------------------------GGATTCCTGGCGCGGCGCCTTTGCTTGCT
TCACCCGTTTCTTGGAGTGCGAGCTCGCTCACTGAGAGCGGCAGATCTCAGCGCCGAGCCCCAGCAAAAGCTGCAAGCCC
CCCCACCCAAGCCTTTCC-----------TCGCTGATTCTGGCAAGTATTTGCAAGGGGAAAGTTTGGAGAAGCTTTTTC
GTCCTCTGGTTTCCCCAAATTGGAAGACGCTTTCTTGGATGAGATTTGTGGTGGAATCTCAGTAGCGCTGGTGGAGATGG
GGATGTGTCCTGCCGACTCCCTCGCCGCCGGCCGGACCCGCCGCGCTGGGTCCCTCGCTCCCCTGCCCAAGCGCGTCTGC
GTCTTCTTCGTGGACGCCGACGCCACCGAGTCCGAGTCCTCGGGGGACGAAGAGGTCAGGCGCGGCAGGCGGCGCGTGCG
GAAGGTCATCGACATCAGCGTGAAGGCCTCCTCTCAGCCGTCTCCGGCGTCGTCCGTCCCGCGGAGACGGGCTCTGCTGC
GGCGGCGGCGGGTGGCCAAGGCCGGCGACGGCGGCTACCGTCGGCGGTTCCGTGGCGTGCGGCAAAGGCCGTGGGGCAAG
TACGCCGCGGAGATCCGCGACCCGAGCCTGCAGAAGCGGCTGTGGCTCGGCACCTTCGACACCGCCGAGGAGGCTGCCGC
CGTGTACGACGACGCGGCCGTGCGCCTCAAGGGATCCCACGCCGTCACCAACTTCACGTCCAGCTCCAGCTCCGACTCCG
ACTACGTCGCGTCCGCCAAGCCCCGCTCCCCGCCGCAGGCCAAGCTCCGTCCTACCGGGGAAGCGGCAGCAGAGGCCCCC
GCGACCGTTCCCCCTTCCGCGCCGTCGCCGCCCTCGCAGCCCGAGCCCGAGGAGGACGACGCCGACTCGTTCAACCCGTT
CGCCTCGTCCCTCACCCCCGTCCTCCGTCGCGCG------------CCCCGTCCAGTGGACCACCTGTACGGGGAGCTCA
GCGACCTGGCCTCGGCCGCTCCGCCGTCCAAGGCGGTGGAGTTCGACTGGCAGCAGCCGTGGTGGGACAGCGAACCGAAG
GCGACGGAGTTCGACTGGCAGCTGCCGTGGTGGGAGAGCGAGGACTTCGTGATGCCGCCGGCGGCGAGCGCCGTCGGCGT
GATATGACGCCCCTGCCCCTACCCCCACCCCCACCCCCTGCCGCGGCGTTTCGCGCCCTCGGGGCGGGC-AGTGGCGGGA
GACGCGTGAGGCAGTGGCGGGAGATGCGTTGCGTTCCAGTACTGTTAC---TATTATTACTTCGTTTATTAAT---TAGA
TCTACTAGTACTGCGTACACTCCAGTAGCCGCAGCAGCAGAGCAGAGGAGTGAATGGTTGTTGCTT-------------G
TGGTGGTGGTGGTGGTGAGCTCAGGCGGGGGCCCCGCCC-----------TTGTGCGTGACCCGCCTTAACTCGCACGTC
TCCGGGGTGGAAACGGAGCAGTGCGGTCGCGTCGCAGTGCCGACAGTGGCCGCATGCCCGTTACTGTAATGACGAGTAAA
AC-TGTAATTGTTGTCGTGATGGTGTGTTTGTT----------------------TTACATCGCCTTTCCGCCTTGGTCG
TCGTCGTGAGGAGTTGTTCAC---GCAAGCTGGCGTCCAAGTGGTGAAGATTTTGCATCTT-------------------
------------------TACTGGCTACAAATCCACGCCCAAGTGGGAGCGTGACCATGACAGGATCCCAGTAGTAGCAA
ATGAATGTTTTCTTTTTCCATTTTCCAGGCGTGTAGGGCCGCGGATTG------TGAGAGGTCAATTCGGCAAAGTTGCG
CAGATCAGATTAAAC----ATAGCCGGCCGCCGTGTCGCCGT--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------
>chr5A_1_TraesCS5A01G424600
GTCTAATTAGCTAGGAATTGTAAAAAAAAAACAGAATGACAATTCTGAAAAAAGCTGGGGAGGAGGTAAGAATTGCCCAA
AAGAACTGGCCTTGACATTTTTCTTGTGTGAAAAATACAA-GTTTAGACAAATAACATCCGGGAACCGAGCGCAGTCTTG
AATTGTCAATTGTCCCAGCACATATCATGCCAATGGAGTCACATACCTAACACAACGTG-TAAGTTCCAATCCACTTTCA
TGTGAACAAGTCATCCGAAACTATGCCAA-GCACACGATTTGTAAGAGTACTGCTGGTAACATTAAAGACCTAATCTGAT
GATACAGAGCAACGCAGCAGCTTAATTCATTTCAACCTGGCCACATGTTGGGCAACGGGCATCCCAAGCCCAAATTCAAA
TTCAAATCCACTTCGAATTCGAATCACGCACCTCACACTCCGG---GCATGAGGAGAGGAGGAGGGGCAAAGTGGTCAAA
TCCCGCAAAGGCAGGCACGGCCCAGTCCTCTGCACCACTGCATGCGCTCGTTTCACTGTCAAAAGCAGAGCAGGTCACGC
--GGAGGGCAGCAGTGTAAAATCACAAGGGG-TGATAAGATCGAGAGGACGAGAGGAGGACTCCGTAGTGGCATCCACCT
GTGCCGTGAGTGAATCTATACCATCTCCTTCCGCAACTACTTGTACTAGTACCTTTCTCCAAGCTCTGTCCCAACCCCCC
A--CTCTGCTTCTATCCCGCCGACCCGCCCGCCCGGCAGAACCCTGTCTAAANNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGATTCCTGGCGCGGCGCCTTTGCTTGCT
TCACCCGTTTCTTGGAGTGCGAGCTCGCTCACTGAGAGCGGCAGATCTCAGCGCCGAGCCCCAGCAAAAGCTGCAAGCCC
CCCCACCCAAGCCTTTCC-----------TCGCTGATTCTGGCAAGTATTTGCAAGGGGAAAGTTTGGAGAAGCTTTTTC
GTCCTCTGGTTTCCCCAAATTGGAAGACGCTTTCTTGGATGAGATTTGTGGTGGAATCTCAGTAGCGCTGGTGGAGATGG
GGATGTGTCCTGCCGACTCCCTCGCCGCCGGCCGGACCCGCCGCGCTGGGTCCCTCGCTCCCCTGCCCAAGCGCGTCTGC
GTCTTCTTCGTGGACGCCGACGCCACCGAGTCCGAGTCCTCGGGGGACGAAGAGGTCAGGCGCGGCAGGCGGCGCGTGCG
GAAGGTCATCGACATCAGCGTGAAGGCCTCCTCTCAGCCGTCTCCGGCGTCGTCCGTCCCGCGGAGACGGGCTCTGCTGC
GGCGGCGGCGGGTGGCCAAGGCCGGCGACGGCGGCTACCGTCGGCGGTTCCGTGGCGTGCGGCAAAGGCCGTGGGGCAAG
TACGCCGCGGAGATCCGCGACCCGAGCCTGCAGAAGCGGCTGTGGCTCGGCACCTTCGACACCGCCGAGGAGGCTGCCGC
CGTGTACGACGACGCGGCCGTGCGCCTCAAGGGATCCCACGCCGTCACCAACTTCACGTCCAGCTCCAGCTCCGACTCCG
ACTACGTCGCGTCCGCCAAGCCCCGCTCCCCGCCGCAGGCCAAGCTCCGTCCTACCGGGGAAGCGGCAGCAGAGGCCCCC
GCGACCGTTCCCCCTTCCGCGCCGTCGCCGCCCTCGCAGCCCGAGCCCGAGGAGGACGACGCCGACTCGTTCAACCCGTT
CGCCTCGTCCCTCACCCCCGTCCTCCGTCGCGCG------------CCCCGTCCAGTGGACCACCTGTACGGGGAGCTCA
GCGACCTGGCCTCGGCCGCTCCGCCGTCCAAGGCGGTGGAGTTCGACTGGCAGCAGCCGTGGTGGGACAGCGAACCGAAG
GCGACGGAGTTCGACTGGCAGCTGCCGTGGTGGGAGAGCGAGGACTTCGTGATGCCGCCGGCGGCGAGCGCCGTCGGCGT
GATATGACGCCCCTGCCCCTACCCCCACCCCCACCCCCTGCCGCGGCGTTTCGCGCCCTCGGGGCGGGC-AGTGGCGGGA
GACGCGTGAGGCAGTGGCGGGAGATGCGTTGCGTTCCAGTACTGTTAC---TATTATTACTTCGTTTATTAAT---TAGA
TCTACTAGTACTGCGTACACTCCAGTAGCCGCAGCAGCAGAGCAGAGGAGTGAATGGTTGTTGCTT-------------G
TGGTGGTGGTGGTGGTGAGCTCAGGCGGGGGCCCCGCCC-----------TTGTGCGTGACCCGCCTTAACTCGCACGTC
TCCGGGGTGGAAACGGAGCAGTGCGGTCGCGTCGCAGTGCCGACAGTGGCCGCATGCCCGTTACTGTAATGACGAGTAAA
AC-TGTAATTGTTGTCGTGATGGTGTGTTTGTT----------------------TTACATCGCCTTTCCGCCTTGGTCG
TCGTCGTGAGGAGTTGTTCAC---GCAAGCTGGCGTCCAAGTGGTGAAGATTTTGCATCTT-------------------
------------------TACTGGCTACAAATCCACGCCCAAGTGGGAGCGTGACCATGACAGGATCCCAGTAGTAGCAA
ATGAATGTTTTCTTTTTCCATTTTCCAGGCGTGTAGGGCCGCGGATTG------TGAGAGGTCAATTCGGCAAAGTTGCG
CAGATCAGATTAAAC----ATAGCCGGCCGCCGTGTCGCCGTCGCTCGCCAAGAAATTGGGGAGAAACGGTGGTGGAAAC
TAGAAAGCCACCTGGCCATGGCCACGTTTCTCGGTTTGGTAGACTTTTCAAACCGGATATTTGC----------TGCTTC
GGTGCGCCACGAGGCGGCATCTCGGCCGTTATTCGTGCGGCCCGGTGATGAGGCGGCGGTGGGGACCGCACGGGTGGATT
TGGCGGGAACTTGGCGTGGCCTCAAGCCAGCGTGACGCCTTTCGCGCCATTTCTTGCCCG-TCTGGTCAAAATGACGGTA
CTGTCCCTGTCCTATCGGCGGTGACAAGCGCTCTCGCGGGACAGTCCCGGTCGGCTGGATAGACTTGTTTTTAGATACTT
GCTATAATTCTCATGGTAATTAAAAAAATCTTATCTAGCTCCTACACTATTTGATTAATGAAAAAATTCCTATGAATCTT
CATGCAAAATCCAACTGTGTAGGCCCATGACCGCTAGGAAGTTCTTGTGCATGCACTAGACACCAAATCTCACTGTGGCG
TACGCATGACGAAAAACACTAACCTCGCGACGAAAAACACTAACCTCGCCGCCCTGAGGAGCTGGTAGGAATCAATGTTG
GAGCTCCGTCTAATCCTTTCTGACACACGAACTTGAGGATGATCGGATCTGAGAAGACCGACTGAAGATGAAACGTCACC
TATGCGAGGACTAAAACTCTAAGATATTTACAAGTCGAGCTAAACGGTGTTATTGAGAGTTTTTTTATGAGCGTATGCTT
CATCTGCTCAGTGGGCAACTAACCATGCTCTGAACTGCCTTTGGTAGGAAGTTTTTGGTGTCGTTGAGTTTTCGCCCCAT
AATAGGTGTTTCGGTGATGAGCACAGAACTCGTTTTCCCCTTTCTGGTCGCTTTACTCTCTTGTTCAGATAGTTGTATTT
ATGTTATTCTATTATTAATGCAAAGGGGCTATGTCCGGTTTGAAAATATAGATTCCGAGGACTTAGATTTTGCTCTTATT
TGCTTCCTGGGAG
>chr5B_91
CTTAGA--------------------------------------------------------------------------
---------------CATTTTTCTTCTGCAAAAAATACGA-GCTTAGACAAATAACATCCAGGAAGTGAGTGCAGTCTTG
AACTGTGAATTGTCCCAGCACATATCATGCCAATCGAGTCACACACCTAACACAAAGTGTTAAGTTCCAATCCACTTTCT
TGTGAACAAGTCATCCGAAACTATGCCAAAGCACACGATTTGTAAGAGTATTGCTGGTAACATTAAAGACCTAAACTGAT
GAT---TTG----------------------------------------------CGGGCATCCCAGGCTCA-----AAA
TTCAAATCCACTTCGAATTCGAATCACGCACCTCACATTCCGGGCAGCATGAGCCGAGGCGGAGGGGCAAAGTCGTAAAA
TCACGCAAAGGCA---ACGGCCCAGTCCTCTGCACCACTGCATGCGCTCGTTTCACTGTCAAAAGCAGAGCGGGTCACGC
GGGGAGGGCAGCAGTGTAAAATCACAAGGGGGTGATAAGATCGAGAGGACGAGAGGAGTACTCCGTAGTGGCATCCACCT
GTGCGGCGAGTGAATCTATACCATCTCCTTCCGCTAGTA---GTACTAGTACCTTTCTCCAAGCTCTGCCTCAACCCCCT
CCCCTCTGCTTCTATCCCGCCGACCCGCT--CCCGTTAGAACCCTGTCTAAACCCCCAAAATCATCCCAGGATTACTCTC
CTCCTCGCCCCGATCCGCCCGGAGCAGCCGAGAGGC-GCCCCCCCCTGCCCAAATCCGGAGCTTCGTCTCTGGTTGCGAG
GTATCCCGCTGG--------------------------------------------------------------------
---------------------------------------------------GGATTCCTGGCGCGGCGCCTTTGCTTGTT
TGACCCGTTTCTTGGAGTGTGAGCTCGCTCACTTGGAGCGGCAGATCTCAGCGCTGCACCCCAGCAAAGGCTGCAAG-CC
CCCCACCCAAGCCTTTTCTCGGCCCTTCTTCGCTGGTTCTGGCAAGTATTTGCAAGGGGAAAGTTTGGAGAAGCTTTTCC
GTCCTGTGTTTTCCCCAAATTGGAAGAGGCTTTCTTGGATGAGATTTGTGGTGGAATCTCAGTAGCGCTGGTGGAGATGG
GGATGTCTCCTGCCGACTCCCTCGCCGCCGGCCGGACCCGCCGCGCTGGATCTCTCGCTCCCCTGCCCAAGCGCGTGTGC
GTCTTCTTCGTGGACGCCGACGCCACCGAGTCCGAGTCCTCGGGGGACGAAGAGGTCAGGCGCGGCAAGCGGCGCGTGCG
GAAGGTCATCGACATCAGCGTGAAGGCCTCCTCTCAGCCATCTCCGGCGTCGTCCATCCCACGGAGACGGGCTCTGCTGC
TGCGGCGGCGGGCGGCGAAGGCCGGCGACGGCGGCTACCGCCGGCGGTTCCGTGGCGTGCGGCAGCGGCCGTGGGGCAAG
TACGCCGCGGAGATCCGTGACCCGAGCCTGCAGAAGCGGCTGTGGCTCGGCACCTTCGACACCGCCGAGGAGGCTGCCGC
CGTGTACGACGACGCGGCCGTGCGCCTCAAGGGATCCCACGCCGTCACCAACTTCTCGTCCAGCTCCAGCTCCGACTCCG
ACTACGTCGCGTCCAACAAGCCCCGCTCCCCGCCGCCGGCGAAGCTCCGTCCTACCGGGGAAGCGGCAGCAGAGGCCACC
GCGACCGTTCCCCCATCCGCGCCGTCGCCGCCCCCGGAGCCCGAGCCCGAGGACGACGACGCCGACTCGTTCAACCCGTT
CGCCTCGTCCCTGACCCCCGTCCTCCGTAGCGCGCCCGGCGAGGCGCCCCGCCCAGTGGACCACCTGTACGGCGAGCTCT
GCGACCTGGCCTCGACCGCTCCGCCATCCAAGGCGGTGGAGTTCGACTGGCAGCAGCCGTGGTGGGAGAGCGAGCCGAAG
GCAACGGAGTTCGACTGGCAGCTGCCGTGGTGGGAGAGCGAGGACTTCGTGATGCCGCCGGCGGCGAGCGCCGTCAGCGT
GATATGACGCCCCTGCCCCTACCCG-------------TGTCGCGGCGTTTCGCGCCCTCGGGGCGGGGAAGTGGCGGGA
GATGCGTGAGCCGGTGGCGGGAGATGCGTTT-----CAGTACTGTTACTATTATTATTACTTCGTTTATTAATTA-TAGA
TCTACTAGTAGTGCGTACACTCCGGTAGC------AGCAGAGCAGAGGAGTGAATGGTGTGTTGCTTGTGGTGGTGGTGG
TGGTGGTGGTGGAGGTGAGCTCAGGCGGGGGGCCC--CGGCGCCCCGGCGTTGTGCGTGATCCGCCTTAACTCGCACGTC
TCCGGCGTGGAAACGGAGCAGTGCGGTCGCGTCGCAGTGCCGACAGTGGCCGCATGCCCGTTACTGTAATGACGAGTAAA
-C-TGTAATTGTTGTCGTGGTGGTGAAGTGGTCGTCAGCTCGTGTGTTTGTTTCATTACACAGCCTTTCCGCCTTGGTCG
TCGTCGTTGTGAGTTGTTTAC---GCGAGCTGGCGTCCAAGTGGTGAAGATTTTGCGTCTT-------------------
------------------TACTGGCTCCAAATTCAGGCCCAAGTGGGAGTGTGACCTTGACAGGATCCCAGTAGTAGCAA
GCGAATGTTTTCC-TTTGCATTTTCCAAGCGTGTAGGGCCGCCGATTG------TGAGAGGTCAATTCGGCAAAGTTGCG
CAGATCAAA-TAAAC----ATAGCCGGCCGCCGTGTCGCCGTCGCTCGCCAAGAAATTGGGGGGAAATGGTGGTAGAAAC
TAGAAAGACACCTGGGCATGGGCACGTTTCTTGGTTTGGTAGACTTTTCAAACCGGATATTTGCTGCTTACGAGTGCTTC
GGTGCGCCACGAGGCGGCATCTCGGCCGTTATTCGTGCGGCCCGG---TGAGGAGGCGGTGGGGACCGCCCGGGTGGATT
TGGCGGGAACTTGGCGTGGCCTCAAGCGAGCGTGACGCCTTTCGCGCCATTTTCCTGCCCATCTGGTCAAAATGACGGTA
GTGTCCCTGTCCTATCGGCGGTGAGAAGCGCTCTCGCGGGACAGTCCCGGTCGGCTGGATA-------------------
--------------------------------------------------------------------------------
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-------------
>chr5D_91
CTTAGA--------------------------------------------------------------------------
---------------CAATTTTCTTCTGCGAAAAATAAGGGGCTTAGACAAGTAACGTCC-GGAAGTGAGTGCAGTCTTG
AACTGTCAATTGTCCCAGCACATATCATGCCAATCGAGTCACATACCTAACACAAAGTGTTAAGTTCCAATCCACTTTCT
TGTGAACAAGTCATCCGAAACTATGCCAA-GCACACGATTTACCAGAGT-------------------ACCTAATCTGAT
GATACATTG----------------------------------------------CGGGCATCCCAAAGC-----TCAAA
TTCAAATCCACTTCGAATTCGAATCACGCACGTCACATTCCGG---GCATGAGCCTAGGAGGA-GGGCAAAGTGGTCAAA
TCCCGCAAAGGCA---ACGGCCCAGTCCTCTGCACCACTGCATGCGCTCGTTTCACTGTCAAAAGCAGAGCGGGTCACGC
GGGGAGGGCAGCAGCGTAAAATCACAAG-GGGTGATAAGATCGAGAGGACGAGAGGAGTACTGCGTAGTGGCATCCACCT
GTGCCGCGAGTGAATCTATACCATCTCCTTCCGCTAGTA---CTACTAGTACCTTTCTCCAACCTCTGTCTCAACCCCCT
CCCCTCTGCTTCTATCCCGCCGACCCGCT--CCCGTTAGAACCCTGTCTAAACCCCCAAAATCATCCCAGGATTACTCTC
CTCCTCGCCCCGATCCGTCCGGAGCGGCCGAGAGCCGGCCCCCCCCTGCCCAAATCCGGAGCTTCGTCTCTGGCTGCGAG
GTATCGGGCTGG--------------------------------------------------------------------
---------------------------------------------------GGATTCCTGGCGCGGCGCCTTTGCTTGCT
TGGCCCGTTACTTGGAGTGCGAGCTCGCTCACTTGGAGCGGCAGATCTCAGCGCTGAGCCCCGGCAAAGGCGGCCA----
-------------------------TTCTTCGCTGATTCTGGCAAGTATTTCCAAGGGGAAAGTTTGGAGAAGCTTTTTC
GTCCCGTGTTTTCCCCAAATTGGAAGAGGCTTTCTTGGATGAGATTTGTGGTGGAATCTCAGTAGCGCTGGTGGGGATGG
GGATGTCTCCTGCGGACTCCCTCGCCGCCGGCCGGACCCGCCGCGCTGGGTCCCTCGCTCCCCGGCCCAAGCGCGTGTGC
GTCTTCTTCGTGGACGCCGACGCCACCGAGTCCGAGTCCTCGGGGGACGAGGAGGTCAGGCGCGGCGAGCGGCGCGTGCG
GAAGGTCATCGACATCAGCGT---------CTCTCAGCCGTCTCCGGCGTCGTCCATCCCACGGAGACGGGCTCTGCTGC
GGCGGCGGCGGGCGGCGAAGGCCGGCGACGGCGGCTACCGTCGGCGGTTCCGTGGCGTGCGGCAGCGGCCGTGGGGCAAG
TACGCCGCGGAGATCCGCGACCCGAGCCTGCAGAAGCGGCTGTGGCTCGGCACCTTCGACACCGCCGAGGAGGCTGCCGC
CGTGTACGACGACGCGGCCGTGCGCCTCAAGGGGTCCCATGCCGTCACCAACTTCTCGTCCAGCTCCAGCTCCGACTCCG
ACTACGTCGCGTCCACCAAGCCCCGCTCCCCGCCGCAGGCGAACTTTCGTCCTACCGGGGAAGCGGCAGCAGAGGCCCCC
GCGACCATTCCCCCCTCCGCGCCGTCGCCGCCCTCGCAGCCCGAGCCCGAGGAGGACGACGCCGACTCGTTCAACCCGTT
CGCGTTGCCCCTGACCCCGGTCCTCCGTCGCGCGGCCGGCGAGGCGCCCCGCCCAGTGGACCAGCTGTACGGCGAGCTCT
GCGACCTGGCCTCGGCCGCTCCGCCGTCGAAGGCGGTGGAGTTCGACTGGCAGCAGCCGTGGTGGGATAGCGAGCCGAAG
GCGACGGAGTTCGACTGGCAGCTGCCGTGGTGGGAGAGCGAGGACTTCGTGATGCCGCCGCCGGCGAGCGCCGTCAGCGT
GATATGACGCCCCTGCCCCTACCCCG-----------CTGCCGCGCCGTTTCGCGCCCTCGGGGCGGG-AAGTGGCGGGA
GGCGCGTGAGCCAGTGGCGGGAGATGCGTTGCGTTCCAGTACTGTTAC---TATTATTACTTCGTTTATTAATTAGTAGA
TCTACTAGTACTGCGTACACTCCAGTAGC------AGCAGAGCAGAGGAGTGAATGGTTTGTTGCTTGTG---GTGGTGG
TGGTGGTGGTGGTGGTGAGCTCAGGCGGGGCCCCCGCCGGCGCCCCGCCGTTGTGCGTGATCCGCCTTAACTCGCACGTC
TCCGGCGTGGAAACGGAGCAGTGCGGT-----------GCCGACAGTGGCCGCATGCCCGTTACTGTAATGACGAGTAAA
CTGTGTAATTGTTGTCGTGATGGTGTGTTTGTT----------------------TTACATCGCCTTTCCGCCTTGGTCG
TCGTCGTTATGAATTGTTTACTACGCGAGCTGGTGT-CAAGTGGTGAAGATTTTGCGTCGTGATTGTGCATGTAATCGGG
CGTGCACATCATCTTTACTACTGGCTCCAAATCCACGCACAAGTGGGAGCGTGGCCATGACAGGATCCCAGTAGTAGCAA
GCGAATGTTTTCC-TTTCCATTTTCCAAGCGTGTAGGGCCGCGGATTGGGATTGTGAGAGGTCAGTTCTGCAAAGTGGCG
CAGATCGAA-TATACGTACATAGCCGGCCGCCGAGTCGCCGTCGGTCGCCAAGAAATTGGGGAGAAATGGTGGTAGAAAC
TAGAAAGCCACCTGGCCATGGCCACGTTTCTCGGTTTGGTAGACTTTTCAAACCGGATATTTGCTGCTTACGAGTGCTTG
GGTGCGCCACGAGGCGGCATCCCGGCCGTTATTCGTGCGGCCCGG---TGAGGAGGCGGTGGGGACCGCCCGGGTGGATT
TGGCGGGAACTTGGCGTGGCCTCAAGCCAGCGTGACGCCTTTCGCGCCATTTCTTGCCCG-TCTGGTCAAAATGACGGTA
CTGTCCCTGTCCTATCGGCGGTGAGAAGCGCTCTCGCGGGACAGTCCCGGTCGGCTGGATAGACTTGTTTTTTAGATAGC
----TAATTCTCATCGTATAATTAACAAAA--------------------------------------------------
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>SNPs
S-SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSS----------S--S---------S---S-----------------S----SS---S---------
--S-------------------------------S--------------------S-----------------------S
--------------------------------------------------S-----------------------------
------SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------SSS-----
-------------------------------------S---------------SS-------------------------
-------------SSS-------------------------------------------------------S--------
----------------------------------------------------------S---------------------
------S---------------------------S-S--SSS----------------------------S--------S
S---------------------------SSS----SS---------------SSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------
-S-------------------------------SS-------------------S-------------S--------S--
----------------S---------------------------------------------------------------
-----S--S------------------S----------------------------------------------------
------S---------------------------------------------------------------------S---
-------------------------------------------------------------------S------------
-------------------------------------------------------S----S-------------------
------------S---S-----------------------------------------------SS--------------
--------------------------------------------------------------------------------
-------------------------------------------------------S------------------------
--------------S-------------------------S---------------------------------------
--------------S-----------------------------------------------------------------
------------S--------------------------------------S--------------------S------S
-------------------------------------------------------------------S-----S------
---------------------------------------------------------------------------S----
-------------------------SSSSSSSSSSSS-------------------------------S-----------
----------S---------------------------------------------------------------------
-----------------------------SSSSSS------------------------SS-SSS---------------
--------------------------------------S---------------------S-------------------
-----S--------------------------------------------------------------------------
S-------------------------------------------------------------------------------
-------S-S--------S-------S-----------------------------S-----------------------
--------------------------S-----------------------------------------------------
SS----------SS-------------S----------------------------------------------------
-------S-S---------------------------------------------------------S------S-----
--------------------------------------------------------------------------------
---------------------------------------------SSS-----S---------------S----------
--------------------------------------------------------------------------------
------------------------S-----------------------------------------------SSSSSSSS
SSSS----------S---SSSSS--S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSS
>forward_94
--------------------------------------------------------------------------GCCCAA
AAGAACTGGCCTTG------------------------------------------------------------------
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>reverse_1137
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------CCTCGCTGATTCTGGCAAGT--------------------------------------------
--------------------------------------------------------------------------------
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>forward_339
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------T
GATACAGAGCAACGCAGCA-------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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>reverse_2355
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------CAGCAGAGCAGAGGAGTGAA--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>forward_619
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------ATCGAGAGGACGAGAGGAGG---------------------
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>reverse_2650
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------GGAGTTGTTCACGCAAGCTG---------------------------------------------------
--------------------------------------------------------------------------------
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>forward_2350
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------CTGCGTACACTCCAGTAGCC--------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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>reverse_3861
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------CAAAGGGGCTATGTCCGGTT----------------------------------------
-------------
