>input_sequence_43582
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------ATGGAGGCGAACCAGGA
GAAGGCTCCGGGGACTGCCACCGGCGGCGACGCCCCGAGGCCGGTGCGAGCGGTGTGCGTCTTCTGCGGCAGCAGGCCTG
GCAACCGGCCGTCCTTCAGCGCGGCCGCCCTCGACCTCGGGAAGCAACTGGTGAGC------------------------
-------------TAGCTAGCCGTCAAGCTCTGCCCATGTGGTGCATGTCTCGCTAACT----TGGTTCTCGACGGCGCA
CGTACGCATCCTTAATCCTTTTGCAGGTTGAGCGGCAGCTCGATCTCGTCTACGGCGGCGGCAGCGGCGGCCTGATGGGC
CTCGTGTCCAAGGCCGTCCACGACGGCGGCCGCCACGTCCTCGGGTAAAGTCCTACACTGCGCAT-------------CT
ACAGTGCCTCTCACTCTCTGAGATACTAGCTTCCATGGTGGAACTATAGCTTGCAGTTTTGCCATAAATAATCGTCTGGC
TGGCTGCTCCTGTGTGCAGGGTCATCCCTAGTGCTCTCCTGCCGGAAGAGGTAGTGCATGCGCGAATCTCTTCTGCCACC
GTACA-----CACATACATGTCCTGCTCTCCCTGCATTATCTGCATGAACGAAATGCATGCATGTTCC------TGATTA
TTTTAACTTCTAGTAATATACTATGATATATGAAACGTGTTTTTGAATGT---------GCGTACGAGTCTTTCCTAGGT
GTCAGGGGAGACGTTGGGAGAGGTGAAAGTGGTCAGGGACATGCATGAGCGCAAGTCAGAAATGGCAAAACACTCGGACG
CCTTCATCGCCCTGCCAGGTCACAGACTGT--CACTGATCTTAGCCACTGCGTGCTACTCATGCGTGTGTGCGTGTGNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTGTGTGTGTGTGTGTGT-TGAG
TTTCTTGGAAAATGTTGGTAATGTGTGAAGTTAGCCAAACGTTCAAGGTCGATACATGGAGTAATC-AAGAATCTTAGAA
GGCGGGTTAATGAGTTCTTGCGTTGCTGCTCATTGCTTGTGTAACGTACGTACGTGCAGGCGGATATGGGACGATCGAAG
AGCTGCTGGAGATCATAACGTGGGCGCAGCTGGGGATCCATAACAAACCTGTAAGCTTGTCGCATTTAACTGCCATTCTG
CATTCTTCCTACA-TAATGTATGTGCCGGGGCCAGTGATTGGTTAGGCAGATACTAGTG-----GTGTATACATATGTA-
TACGTAGGCCCTCG----TGCCCTAATCCTCACGCCGTTCCT-GCTAGCTC-------AACGAAAACGATGTGTAACTAA
----TGGCAACTTACGTGCGGTTGGTGATGATGTCTCGTTGCATTAGGTGGGGCTGCTCAACGTGGACGGCTACTACAAC
AGCCTGCTTTCGCTGTTCGACAAGGGCGTCGAGGAGGGCTTCATCGACGACGCGGCGCGCAACATCTTCGTCCTCGCCGA
CAACGCCTCCGAGCTGCTCACCAAGCTCACGGCCCATCTTG---------ACGACGCCGGCGGCAGCGAC---GACCGCA
ACGGCATGGCAGCCGCCGGCGTCAAGAGGAAAAGAGGCTAG---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>chr4A_1_TraesCS4A01G277200
TCCTTACATTTCCCTACCCATACTTAAATCATATCAAATCTTACCAAAATATAGGATATGATTGGTGTAAGAACATCTAT
AACCGGACCTCATATTTTGCGGACAGCCCGGACAGGGGAGAGAATAAGAAAAAATCACTCAACCGGACTCCTGAAATTGT
CCTCATATGTCCAAGTTCTCCGTGAACCATTTCTCTCCTTGTTTTTGTCCTTCTCTCTTTACCATCACCAATCATGTGCA
TGTGTCTAGACATGGAAATGAGGGTTCGGAGCGGACACGTCCGGGGATGTACCGGGGATCAAATTAGTTTAGTCCGGCTG
TAGATGGTCTAAGGTATATGACTT---------ATATTGAATTAGAATATGTATATTAGTAGCGAAAGTGCTATTGTGAG
CTCGAGCTCACAGGCTCCCTTTGCTACAGTACACACGAAAAAATATTTAAATAGTTCAAAAAAATCTGAATTTTTTTGGC
TACAAACATTGATATCTTTTTCACATGCGTGCAAAATTTCATGAAAAAATGACATTCATGCAGGTCTCGGAAAAAAAGAC
AAAATCGATGCTCCAAAATGTATCCAAAAACAGTTTTTTTGGAGCATGATTTTTTTTTTGCCGGGACCTCCACAAATGTC
ATTTCATTACGAAAATTGGTACGCATGTAGAAAAAACATCAAAGTTTCTTGACAAATAATTTCAGATTTTGTTGAATTGT
TTTACTATTTTTTCTGATGTTACTGTTCATCCGTGATCACTGGTGACCGGGATCAATTCCTCCGTGTCCTATTAGTAGCT
ACTTTTATACAGCAGGCAAGTTAAGCAACAACGCCTGTCTGGTGCATAAATAGGCGGCGAGGGGACCTCACAA-------
GGGCGCCGTCCTCCATAGCAGCAC-----AGCACACCCACCCTCATCTTCAGCTCTGCCGAAGCACAAGCAGAAGCACCC
ACCCTCATCTTGGTCTCTCTATCCGTACGCCTCCCTCACCCCTCCCTTCACCGCCCGAC--ACATGGAGGCGAACCAGGA
GAAGGCTCCGGGGACTGCCACCGGCGGCGACGCCCCGAGGCCGGTGCGAGCGGTGTGCGTCTTCTGCGGCAGCAGGCCTG
GCAACCGGCCGTCCTTCAGCGCGGCCGCCCTCGACCTCGGGAAGCAACTGGTGAGC------------------------
-------------TAGCTAGCCGTCAAGCTCTGCCCATGTGGTGCATGTCTCGCTAACT----TGGTTCTCGACGGCGCA
CGTACGCATCCTTAATCCTTTTGCAGGTTGAGCGGCAGCTCGATCTCGTCTACGGCGGCGGCAGCGGCGGCCTGATGGGC
CTCGTGTCCAAGGCCGTCCACGACGGCGGCCGCCACGTCCTCGGGTAAAGTCCTACACTGCGCAT-------------CT
ACAGTGCCTCTCACTCTCTGAGATACTAGCTTCCATGGTGGAACTATAGCTTGCAGTTTTGCCATAAATAATCGTCTGGC
TGGCTGCTCCTGTGTGCAGGGTCATCCCTAGTGCTCTCCTGCCGGAAGAGGTAGTGCATGCGCGAATCTCTTCTGCCACC
GTACA-----CACATACATGTCCTGCTCTCCCTGCATTATCTGCATGAACGAAATGCATGCATGTTCC------TGATTA
TTTTAACTTCTAGTAATATACTATGATATATGAAACGTGTTTTTGAATGT---------GCGTACGAGTCTTTCCTAGGT
GTCAGGGGAGACGTTGGGAGAGGTGAAAGTGGTCAGGGACATGCATGAGCGCAAGTCAGAAATGGCAAAACACTCGGACG
CCTTCATCGCCCTGCCAGGTCACAGACTGT--CACTGATCTTAGCCACTGCGTGCTACTCATGCGTGTGTGCGTGTGNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTGTGTGTGTGTGTGTGT-TGAG
TTTCTTGGAAAATGTTGGTAATGTGTGAAGTTAGCCAAACGTTCAAGGTCGATACATGGAGTAATC-AAGAATCTTAGAA
GGCGGGTTAATGAGTTCTTGCGTTGCTGCTCATTGCTTGTGTAACGTACGTACGTGCAGGCGGATATGGGACGATCGAAG
AGCTGCTGGAGATCATAACGTGGGCGCAGCTGGGGATCCATAACAAACCTGTAAGCTTGTCGCATTTAACTGCCATTCTG
CATTCTTCCTACA-TAATGTATGTGCCGGGGCCAGTGATTGGTTAGGCAGATACTAGTG-----GTGTATACATATGTA-
TACGTAGGCCCTCG----TGCCCTAATCCTCACGCCGTTCCT-GCTAGCTC-------AACGAAAACGATGTGTAACTAA
----TGGCAACTTACGTGCGGTTGGTGATGATGTCTCGTTGCATTAGGTGGGGCTGCTCAACGTGGACGGCTACTACAAC
AGCCTGCTTTCGCTGTTCGACAAGGGCGTCGAGGAGGGCTTCATCGACGACGCGGCGCGCAACATCTTCGTCCTCGCCGA
CAACGCCTCCGAGCTGCTCACCAAGCTCACGGCCCATCTTG---------ACGACGCCGGCGGCAGCGAC---GACCGCA
ACGGCATGGCAGCCGCCGGCGTCAAGAGGAAAAGAGGCTAGCTGACTAGCTAGC---GAGCAGCAGGTCCCTGCCCTTCG
TCGTGTAGCTTCGTCTTCGTCAAGCTTACTAAGTTCTATCTATTGCTAGCTCTTATTAAATAAATAATCT---TCTTCAT
GCATGTAATATCGAGCGTTCCCTAACCC---TAATATTCCGTGGCAAGCACAAAGTATGCATGCTTCAATGCTCCGTAAT
TAAGCACAAGTGTACAAGCGTACGGGTGCTGGAGTTGTACCTTGCAGCGCAGCAA-TCGTACCATCGCGTTGTACTCTTC
CCACCTA---ATATTTTATGTCTTCTGGCTACGATATTAATGTGCACAGTCATGTCAGCAGCACACAGCGCACTCGTTTC
---GTACCACGTACACCTAGTACAGCTTGCCGTGCGTCTCGCAAAATGAAAGCAAAAGATAGGCGCGAACCATTTATACC
CTCTCACATGGACCCACAAGCTTCTGAGCATCTACAACCATGGTTGCCTAATCTGGTGCACTGCAC-----TTGGGGCCC
ACGCAGAGGTAGATCATGGCAACGTAGAAATATAGAGCACAATCGGGCACAGATCAACATAGCACCCAAAAGGC----AT
AGTTCAACATTCCACACAAAAGGCACAGTTCACGTAGGGCATAGTTCTTAGGACACTGTTCATCACACCCAAAAGAGACA
GTTGGCCAGATATATTACTAGATACTCCCTTCGTTTCTTTTTAGTCTACATATAAGATTTGGTCAAAGTCAAACTTTGTT
AACTTTGACTAAGTTTATAAACATGTCAAGATTCACAATATGAAATCAATATTGTTAGATGCATCCTGAAATTAATTTTC
AAACCATATAACTTTAATATTGTAGATGTTGATATTTTTTCCTAAAAAGTTGGTCAAACTTTACAAATTTTGACTTTGAC
CAAATCTTATATAAAGACTAAAAAGAAACAGAGGGAGTACTCCCTAATTTAGCTAGAGGAGGTGAGGAGGCGGAAATCAC
CATTTCTTAGCTGGGCCCTTGGCCTT
>chr4D_256
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------AAATGAGGGCTCGGAGCGGACACGTCCGGGGATGTATCGGGGATCAAATTAGTTTAGTCCGGTTG
TAGATGGTCTAAGGTATATGTCGGACACGATTAATATTGAATTAGAATATGTATATTAGTAGCTACTTT-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------TATAGCAGGCAAGTTAAGCAACGT---GTGTCTGGTGCATAAATAGGCGCCGAGGGGACCTCACAA-------
GGGCGCCGTCCTCCATAGCAGCAC-----AGCACACCCACCCTCATCTTTAGCTCTGCCGAAGCACAAG------CACCC
ACCCTCATCTTGGTCTCTCTATCCGTACGCCTCCCCCGTCCCTCCCTTCACCGTCCGACACACATGGAGGCGAACCAAGA
GAAGGCTCCGGAGACTGCCACCGGCGGCGACGCCCCGAGGCCGGTGCGAGCGGTGTGCGTCTTCTGCGGCAGCAGGCCTG
GCAACCGGCCGTCCTTCAGCGCCGCCGCCCTCGACCTCGGGAAGCAACTGGTGAGCCAGTACTTAATTAGAGACACCAGC
CAAAGTAGCTAGCTAGCTCGCCGTCAAGCTCTGCCCATGTGGTGCATGTCTCGCTGACT----TGGTTCTGGACGGCGCA
CGTACGTACGCG---TCC-TTTGCAGGTGGAGAGGCAGCTCGATCTCGTCTACGGCGGCGGCAGCGGCGGCCTGATGGGC
CTCGTGTCCAAGGCCGTCCACGACGGCGGCCGCCACGTCCTCGGGTAAAGTCCTACACGCACTACGCATCTGCTGCTCCT
GCAGTGCCTCTCACTTTCTGAGATA---GCTTCCATGGAG---CTATAGCTTGCAGTTTTACCATAAATAATCGTCTGGC
TGCTTGCTCCTGTGTGCAGGGTCATCCCTAGTGCTCTCCTGCCGGAAGAGGTAGTGCATGCGCGAATCTCTTCTGCCACC
------TACACACATGCATGTCATGTCCTCCCTGCATG------ATAAACGAAATGTATTGCATG---------TGCTTA
TTTTTACTGCT--------------ATATATGAAACGTGCTTTTGAATGTCTACTACGTGCGTACGAGCATTTCCTAGGT
GTCAGGGGAGACGTTGGGAGAGGTGAAAGTGGTCAGGGACATGCATGAGCGCAAGTCAGAAATGGCAAAACACTCGGACG
CCTTCATCGCACTGCCAGGTCACAGACTG--CCACTCATCTTAGCCACTATGTACTACTCGTGTGTGTGTGTGTGTGTG-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------TGTGTGTGTGTGTGTGTGTGTGTG
TTTCTTGGAAAATGTTGCTAATGTGTGACGTTTAAGGTCGACATGACATGATAATAACAAATCAAGAAGCTTAGA-----
--AAACGGGTTAAGTTCTTGCGTTGCGGCTCATTTCTTGTGTAACATACGTACGTGCAGGCGGATATGGGACGATCGAAG
AGCTGCTGGAGATCATAACGTGGGCGCAGCTGGGGATCCATAACAAACCTGTAAGCTTGTCGTATTTAACTGCCATTCTG
CATTATTCCTACATTCATGTATGTGCCGGGGCCAGTGATTGGTTAGCCAGATACTAGTAGTTGTGTGTACATATATGCAC
TACGTAGGCCCTCGTGCCTGCCCTAATCCTCACGCCGTTCCTAGCTAGCGAAAGCGAAAGCGAAAACGATGTGTAACTAT
AATTTGGCAACTTACGTACGGTTG---GTGATGTCTCGTTGCATTAGGTGGGGCTGCTCAACGTGGACGGCTACTACAAC
AGCCTGCTTTCGCTGTTCGACAAGGGCGTCGAGGAGGGCTTCATCGACGACGCGGCGCGCAACATCTTCGTCCTCGCCGA
CAACGCCGCCGACCTGCTCACCAAGCTCACGGCCGCGGCGGTGGCGGCCCACGTTGACGACGGCGGCGAC---GACCGCA
ACGGCACGGCGGCCGCCGGCGTCAAGAGGAAAAGAGGCTAGCTGACTAGCTAGCAGCT-------GGTCCCTGCCCGTCG
TCGTGTAGCTTCGTCTTCGTCAAGCTTACAATGTTCTACTATCTATTAGCTCTG-------AAATAATCT---TCTTCAG
GCATGTAATATCGAGCGTTCCCTAACCC---TAATATTCCGTGGCTAGCACAAAGTATGCATGCTTCAATGCTCCGTAAT
TAAGCACAAGTGTACAAGTGTACGGGTGCTGGAGTTGTACCTTGCAGCGCAGCA-GTCGTACCATCGCGTTGTACTCTTC
CCACCTACTAATATTTTATGTTTTCTGGCTACGATATTAATGTGCACAGTCATGTCAGCAGCACACAGCGCACTCGTT-C
---GTATCAGGTACGCCTAGTACAGCTTGCCGTGCATCTCGTAAAATGAAAGTAAAAGATGGGCGCGAACCATATATACC
CTCTCACTTGGACCCACAAGCTT--GAGCATCTACAACTATGATTTCCTCGTCTGGGGCCCT------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>chr4B_791
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------TACTTT-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------TATAGCAGGCAAGGTAAGCAACGT---CTGTGTGGTGCATAAATAGGCGCCGAGGGGACCTCACAACTCACAA
GGGCGCCGTCCTCCATAGCAGCACAGCACAGCACACCCACCCTCATCTTTAGCTCTGCCGAAGCACAAG------CACCC
ACCCTCATCTTGGTCTCTCTATCCGTACGCCTCCCTCATCCCTCCCTTCACCTCCGAT---ACATGGAGGCGAACCAGGA
GAAGGCTCCGGAGACTGCCAGCGGCGGCGACGCCCCGAGGCCTGTGCGAGCGGTGTGCGTCTTCTGCGGCAGCCGGCCTG
GCAACCAGCCGTCCTTCAGCGCCGCCGCCCTCGACCTCGGGAAGCAACTGGTGAG-----------------ACACCAAC
CAAAATAGCTAGCTA----GCCGTCAAGCTCTGCCCATGTGGTGCATGTCCCGCTGACATGCATGGTTCTCGACGGCGCA
CGCACGTACGCG---TCCTTTTGCAGGTGGAGAGGCAGCTCGATCTCGTCTACGGCGGCGGCAGCGGCGGCCTGATGGGA
CTCGTGTCCAAGGCCGTCCACGACGGCGGCCGCCACGTCCTCGGGTAAAGTCCTGCAGTACGC-----------------
----TGCCTCTCACTCTCTGAGATAC-AGCTTCCATGGAG---CTATAGCTTGCAGTTTTACCATGAATAATGGTCTGGC
TGGCCGCTCCTGTGTGCAGGGTCATCCCTAGTGCTCTCCTGCCGGAAGAGGTAGTGCATGCGCGAATCTCTTCTGCCACC
GTACACTAGACACATACATGTCCTGCTCTCCCTGCAGCATCTGCATGAACGAAATGCATGCATATGCATGTGCTTGATTA
TTTTTACTTCTAGT-----------ATATATGAAACGTGTTTTTGAATATCTACTACGTGCGTACGAGCATTTCCTAGGT
GTCAGGGGAGACGTTGGGAGAGGTGAAAGTGGTGAGGGACATGCATGAGCGCAAGTCAGAAATGGCAAAACACTCGGACG
CCTTCATCGCCCTGCCAGGTCACAGACTGCCCCACTCATCTTAGCCACTATGGACTACTCGTGTGTGTGT----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------T-TGTG
TTTCTTGGAAAATGTTGCTAAGCCAA-ACGTTTAAGGTCGACATGACATGATAATAACAAATCAAGAAAGAAGCTTAGTA
GTAAACGGGTGAAGTTCTTGCGTTGCGGCTCATTTCTTGTGTGACGTACCTGCGTGCAGGCGGATATGGGACGATCGAAG
AGCTGCTGGAGATCATAACGTGGGCGCAGCTGGGGATCCATAACAAACCTGTAAGCTTGTCGTATTTAACTGCAATTCTG
CATTATTCCTACATTAATGTATGTGCCGGGGCCAGTGATTGGTTAGCCAGATACTA---GTTGTGTGTACATATATGTG-
TACGTAGGCCCTCGTGCCTGCCCTAATCCTCACGCCGTTCCTAGCTAGCTC-------AGCGAAAGCGATGTGTAACTAA
CCAATGGCAACTTACGTACGGTTGTTGGTGATGTCTCGTTGCATTAGGTGGGCCTGCTCAACGTGGACGGCTACTACAAC
AGCCTGCTTTCGCTGTTCGACAAGGGCGTCGAGGAGGGCTTCATCGACGACGCCGCGCGCAACATCTTCGTCCTCGCCGA
CAACGCCGCCGACCTGCTCACCAAGCTTACGGCCGCGGCGGTGGCGGCCCACGCTGACGACGGCGGCGGCGAGGACCGCA
ACGGCACGGCGGCCGCCGGCGCCAAGAGGAAAAGAGGCTAGCTGACTAGCGAGCACCGAGCAGCAGGTCCCTGCCCGTCG
TCGTGTAGCTTCGTCTTCGTCAAG----------------ATCTATTAGCTCTC-------AAATAATCTGCTTCTTCAT
GCATGTAATATCGAGCGTGCCCTAACCCTAATAATATTCCGTGGCTAGCACAAAGTATGCATGCTTCAATGCTCCGTAAT
TAAGCACAAGTGTACAAGTGTACGGGTGTTGGAGTTGTACCTTACAGCGCAGCGGGTCGTACCATCGCGTTGTACTCTTC
CCACCCAC---TATTTTATGTTTTCTGACTACGATATTAATGTGCACAGTCATGTCAGCAGAACACAGCGCACTCGTTTC
GTAGTACCACGTACACCTAGTACAGCATGCCGTGCAGCTGGCAAAATGAAAACAAAAGATAGGCGCGA---------ACC
CTCTCACATGGACCCACAAGCTTCTGAGCATCTACAACCATGGTTGCGTAATCCGGTGCCCTACACGTACGTTGGGGCCC
ATGCAGAGGTAGATCATGGCAACGTAGAAATATAGAGCACAATCGGGCACAGATCAACATAGCACCCAGAAGACATATAT
AGTTCAACATTCCACACAAAAGGCACAGTTCACGTCGGGCATAGTTCTTAG-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSS---------S--------------------------S-------------------------S--
--------------------S-SS---------------------------------------S-SSS-SSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSS--S-------------------SSSSS----------------------S-----------------------
-------------------------------------------------S-------------------SSSSSS-----
--------------------------------------S-----------------------------------------
-----------S--------------------------------------------------------------------
----------------------S---------------------------------------------------------
------------------S------------------------------------S------------------------
------S-SS-SSSS-------------S---S-----------------------------------------------
-----------------------------------------------------------S----S---------------
S-------------------------S-----------S-SSS-----------------S-------------------
--------------------------------------------------------------------------------
-------------------------------------S-------------------------S-S-S------------
----S---------SSSSSSSSSSS-------------------------------------------SS----------
--------------------------------------------------------------------------------
-----------------------------S------S------------SS--S------S--S-------S-----SSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------S-
-----------------S----------S---SSSSSSSSSSSSS-SS-SSSS-S-SSS-S-S-SS------S-----S-
-SSSSSSSSS-S--------------S-------S---------------------------------------------
--------------------------------------------------------------S-----------------
----S-----------------------------------------S-----------S----------S-S--------
-----------------------------------------------------------S--------------------
-----------------S------S--S----------------------------------------------------
--------------------------------------------------------------------------------
-------S----S---------------------SSSSSS-------------SS-S--S----S---------------
------S---S-----------------------------------------------------------------S---
-----------------------------S-S------SSSSS-SS-------SSSSSSSS-------------------
---------------------------------------------S----------------------------------
------------------S-----------------------------------S-------------------------
---------------------S----------------------------------------------------------
-----------------------------------S-------------------------------------S------
-----------------------------------------------------------S--S-----------------
-S------------------------------------------------------------------S---S-------
-----------------------------------S---------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_641
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------CGGGACCTCCACAAATGTC
A-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>reverse_2332
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------GAGTTCTTGCGTTGCTGCTC-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>forward_774
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------GATCACTGGTGACCGGGATC--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>reverse_2658
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------GCGGTTGGTGATGATGTCTC-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>forward_787
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------CGGGATCAATTCCTCCGTGT-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>reverse_2808
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------TCCGAGCTGCTCACCAAG-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>forward_2292
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------AGCCAAACGTTCAAGGTCGA----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>reverse_3919
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------AC
CATTTCTTAGCTGGGCCC--------
