>input_sequence_43551
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----------------------------------------ATGGCCCACCCTATTTACCCTCTAGCTTCGCCAATGCACA
CAACCTCCTCCTTGACCCCTTTTGATGCCCTCTCGTACATCTTCTCCTTGTGCGCCCACAACCTCCTCCTCGACCCCTTT
TACTGCCCTCTCATACAGCTTCACCTTGTGCGATGTTCTGTGGCTTTGTTCAGAGGGCCGTTGCACACGGGCGTCACCGT
GACCGCCACGTGCTCCTAGTCATCTCCGCCTTCTCTACATCGGCATGTAACACTATAGATAAAACATTGTTGCTCAACTT
TTGGAGAATTGAATACTTGCGTTGAGCCATTGTGTCGGATGGGTAGTGCACATTTGAGAGCTAGGTAATGTACACCTGTC
AATTAATCATG-AATATGGCGATGATATCCATACATTTCAGGTAAAATGTACATGAGTTTGTATTAGTTCATGAAAATGA
ATGGTTGCATACAAATGAAATCACTACTATGATTTCTGATGTGTGTTTTC-AACGCTTTTACATTAGACAGATTGTTCTT
CTTTTACACGTGTTGTGAACTAGAGCAAGCGAATCATCCCATGGGCTAAATATTTTTCAAGAAAGTGACCTTGGTGGGAA
AGACACTCAAAAATAGGACTAAGATTTTTT---CCTATTGTTTGGGCATGGTGCAACAAATCTGATCATTCCAGTCTCCT
CGTATATCCACCTTCCATGGGTAATGGCTTTTCTTTATCTCTCATGTGTGCCAAATTTCTCAGTCTAAGTGTCGTTGCTC
TCTGATGTTCAACTCCCTGTCCTTTGCCAATCAATGTTTTTCTGTTGGTTCTTTGATGTCCATGTTGATTTTCAGAATGT
TTTGGTTGAATTTTGTGATGCAAGTAACACGAGATCAAATATGATGGTAAGTTCAGTTTCTGGAGCCTCAATTCATTTTC
CAAATTCATGGATTCTCAGTTCCACGGGACTTGCTATACGGTACATGTATGG---AATTTGCTTGCTCTACGT-------
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--------------------------------------GTATGATTTTGCTCAGGTTTCAGCCCGG--------------
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--------------------------------------TGCCAGTTGTTGTTTTTG-CTTGTTTTTTGTTTTATAGAAAA
TCGATACCTACAAAGGTCCAAAAACGATGCCAATTTTTGAC--CTTTTTCTAGACAAAAATAAGCCCTCAAAGTTTCAGT
AGTCATCGAGAGGAAGTTCGAGGGCACCACAAGGGCAGGCGGCCCGACCAGGGGGGTGGCTACGCCACCTGGCCTTGTGG
GCTCCCTGAGTCTCTATTTGCCCCAATTCCTGGCCTACAAATACACATATATTCTTAAACCCTCAAAGCGACACCCAAAG
TGGTGGCAATCCTCATCAGGCAACAAGGTGGATATGAAGATAAATTGCCCTCAATGCAATCAGCATTCCCTGCCTCATGT
ACATGGCGGCTTCTAGCACGATGAATTACTTGGTAATATCCCCATGGATCAGGTGGTGATTAATCCCCAGAATGAGAATC
TCGGTGCCCCTTATGAAGGTGTACATGTTGCTGTTGCTGATCTAGATAACCACAATGTTGCTTTGGGTGACAATGTTGCA
GTACATGCTGATGTTGCAGTCAATGCAGTTGATCATAATGTTGCAGTACAACCAAATGCTCCTACGAACAATGATGCCAA
TGATCATAGTACTGTGCCTGGACTGCCTCCTGATAATGATATGAACAGCAATACTGGTCCTGAGTTTATCCCTCTGCCTG
CTGCCTCCAGTCCTATATTTGTTCCTAGCAATGTCAACATGAACTATAATGATATTCCTTCCTCAAGTAATGCACAATCT
ATTCATACTAGTTGA-----------------------------------------------------------------
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>chr7A_1_TraesCS7A01G301600
ATTCCTCCCTACCCTTCCCCTGCTAACCATACCCACCAACTCTAGCTTTCCTGCCCGACCGTGTCATATGTTGTTGGTGC
CGCTCTCCTGTTATCTTACCTCGGTGTTGTCTCCGCCAACACAACCCCATCCTCGACCCCTTCTGTTGCCCTCTCGCACA
ACTTCTCCTTGCGTGCTATTTTGTGTCCTGTTTGGAGGGCCGCTGCACATGGGGGCCACCACCGCCGTGACATGCTCCTG
GTCATTCGTGCCTCCTCTACATTGTCGAGTAACACCGCGGATAAAACTTTGTTGCTCAACTTTCGGAGATTTTTACTTAA
TCATGTCCTAATGTGGATGGCATACTTGTGCCGAACCATTGTGTTGGACGACCGGTGCAGACTTGAGAGTTCTGTCTTAC
GTCAATTTTTCTTTCAACCTCTTTGTCTGTCCTCCCCAGTCCCCATGTACGTCCACCCTTCCACCGGTTTTCCAACCCCT
CCTCTCCCGCTTGGGTTTTCTTGGCCCATCTAAAGTCTTTGGATTTTTTCATACCACCACCTTCACCAGTTCACAACACA
CACGGTATGGACTATTAAGAACGCATGAACACCCTTATTTCCTGATACCTCTCTCTCCCTCTCTGCTGCAAACCGCCGCC
GTCGCCCGCCCCTTGCCTCTGATTCCAGCCAATGCCGGTCATCTCCCATTCTCTTCTCGACCGGTGTTGCTCCATCTCGA
TCTGCAACATCGATCCCAATGCCTCGTTGCCATTCCACCCTTGCGCGCGCCCGTTGCTAACCCTAGCCACCGGCTCGGGC
TTGCCTGCGCAACCGCATTGTGTGTTGTTGGAGTTGCTCTCCTATTATCTGACTCTGATTTTGTCTCCGTACACGGGACC
AGTAGATGATCCATCCCATTAGGCTAGGGTGGGCCAATGGTAGAGCTTTTCATAAATTTTTAATATTTTTAACTTTTTCT
GCGATGATATAAAGCTATTGGAAAAAACCCAGGGTGGGCCATGGCCCACCCTATTTACCCTCTAGCTTCGCCAATGCACA
CAACCTCCTCCTTGACCCCTTTTGATGCCCTCTCGTACATCTTCTCCTTGTGCGCCCACAACCTCCTCCTCGACCCCTTT
TACTGCCCTCTCATACAGCTTCACCTTGTGCGATGTTCTGTGGCTTTGTTCAGAGGGCCGTTGCACACGGGCGTCACCGT
GACCGCCACGTGCTCCTAGTCATCTCCGCCTTCTCTACATCGGCATGTAACACTATAGATAAAACATTGTTGCTCAACTT
TTGGAGAATTGAATACTTGCGTTGAGCCATTGTGTCGGATGGGTAGTGCACATTTGAGAGCTAGGTAATGTACACCTGTC
AATTAATCATG-AATATGGCGATGATATCCATACATTTCAGGTAAAATGTACATGAGTTTGTATTAGTTCATGAAAATGA
ATGGTTGCATACAAATGAAATCACTACTATGATTTCTGATGTGTGTTTTC-AACGCTTTTACATTAGACAGATTGTTCTT
CTTTTACACGTGTTGTGAACTAGAGCAAGCGAATCATCCCATGGGCTAAATATTTTTCAAGAAAGTGACCTTGGTGGGAA
AGACACTCAAAAATAGGACTAAGATTTTTT---CCTATTGTTTGGGCATGGTGCAACAAATCTGATCATTCCAGTCTCCT
CGTATATCCACCTTCCATGGGTAATGGCTTTTCTTTATCTCTCATGTGTGCCAAATTTCTCAGTCTAAGTGTCGTTGCTC
TCTGATGTTCAACTCCCTGTCCTTTGCCAATCAATGTTTTTCTGTTGGTTCTTTGATGTCCATGTTGATTTTCAGAATGT
TTTGGTTGAATTTTGTGATGCAAGTAACACGAGATCAAATATGATGGTAAGTTCAGTTTCTGGAGCCTCAATTCATTTTC
CAAATTCATGGATTCTCAGTTCCACGGGACTTGCTATACGGTACATGTATGG---AATTTGCTTGCTCTACGT-------
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--------------------------------------GTATGATTTTGCTCAGGTTTCAGCCCGG--------------
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--------------------------------------TGCCAGTTGTTGTTTTTG-CTTGTTTTTTGTTTTATAGAAAA
TCGATACCTACAAAGGTCCAAAAACGATGCCAATTTTTGAC--CTTTTTCTAGACAAAAATAAGCCCTCAAAGTTTCAGT
AGTCATCGAGAGGAAGTTCGAGGGCACCACAAGGGCAGGCGGCCCGACCAGGGGGGTGGCTACGCCACCTGGCCTTGTGG
GCTCCCTGAGTCTCTATTTGCCCCAATTCCTGGCCTACAAATACACATATATTCTTAAACCCTCAAAGCGACACCCAAAG
TGGTGGCAATCCTCATCAGGCAACAAGGTGGATATGAAGATAAATTGCCCTCAATGCAATCAGCATTCCCTGCCTCATGT
ACATGGCGGCTTCTAGCACGATGAATTACTTGGTAATATCCCCATGGATCAGGTGGTGATTAATCCCCAGAATGAGAATC
TCGGTGCCCCTTATGAAGGTGTACATGTTGCTGTTGCTGATCTAGATAACCACAATGTTGCTTTGGGTGACAATGTTGCA
GTACATGCTGATGTTGCAGTCAATGCAGTTGATCATAATGTTGCAGTACAACCAAATGCTCCTACGAACAATGATGCCAA
TGATCATAGTACTGTGCCTGGACTGCCTCCTGATAATGATATGAACAGCAATACTGGTCCTGAGTTTATCCCTCTGCCTG
CTGCCTCCAGTCCTATATTTGTTCCTAGCAATGTCAACATGAACTATAATGATATTCCTTCCTCAAGTAATGCACAATCT
ATTCATACTAGTTGAAGGAAATATGCCCTAGAGGCAATAATAAAGTTGTTATT-TTATATTT-CCTTA-TTCATGACAAA
GGCTTATTATTCATGCTAGAATTGTATTGACCGGAAACTTAAATACATGTGTGAATATATAAACAAAT-A-CCGTGTCCC
TAGTAAGCCTCTACTAGACTAGCTCGTTGATCAAAGATGGTTAA-GGTTTCCTAACCATAGACATGTGTTGTCATTTGAT
-AACGGGATCACATCATTAGGAGAATGATGTGATGGGCAAGACCCATCCATTAGCTTAGCATA-TTGATTGTTCAG-TTT
A-TTGATATTGCTTTCTTCATGTCAAAAAAATATTCCTCCAACTATGAGATTATGCAACTCATGGATACTGGAGGAATAC
CTTGTGTGCTATCAAACGTCACAACGTAACTGGGTGATCATAAAGATGCTCTACAGGTATCTTCGAAGGTGTTTGTT-GA
GTTGGCATAGATCGAGATTAGGATTTTTCACTCCTAGTATCGAAGAGGTATCTCTGGGCCCTCTCGGTAATACACATCAT
AA-GAAGCCTT-GCAAGCAAAGTGACTAATGAGTTAGTTGCA-GGATGATGTATTACAGAACGAGT-AAAGACACTTGTC
GGTAACGAGATTGAACTAGGTATG----TGAAGGAAATATGCCCTAGAGGCAATATTAAAGTTGTTATTTATATTTCCTT
ATATCATGATAAATGTTTATTATTCATGCTAGAATTGTATTAACCGGATACTTAGTACATGTGTGAATATATAGAC-AAA
CAGAGTGTCAGTAGTTTGCCTCTACTTGACTAGCTCGTTGAGTCAATGATGGTTATGTTTCCTAACCATAGACAT-GAGT
TGTCATTTGATTAACGGGATCACATCATTAG-AGAATGATGTGATTGACTTGACCCAT-CTGTTAGCTTAGCATGATGAT
CGTTTAGTTT-GTTGCTATTGCTTTCTCCATAACT-ATACATGTTCCTATGACTATGAGATCATGCAACTCCCGAATACC
>chr7D_13
CCTC------------CCCCCGCTAACCATACCCACCAACTCTGGCTTTCCCGCCCAACTGCGTCATGTGATGTTGGTGC
CGCTCTCCTGTTATTTGACCTCGGTGTTGTCTCCGCCAACACAACCCCCTCCTTGACCCCTTTTGTTGCCCTCTCGCATA
GCTTCTCCTTGCGCGCTATTTTG---------------------------------------------------------
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--------------------TGTGCTGTTGGCGCTGCTCCCCTATTATCTAACTCTGATTTTGTCTCCGTACACACAACC
AGTAGAGGATCCATCCCAT------------------TGGCAGAGCTATTCATAAAATTTTAATATTTTTA--TTTTTTT
GCTATGATATAAAGCTATTGAAAAAAA--CAGGGTGGGCCGTGGCCCACCCTGTCTACCCTCTAGCTTTGCCAATGCACA
CAACCTCCTCCTTGACCC-TTTTGTTGCCCTCTCGTACATCTTTGCCTTGTGCGCCCAAAACCTCCTCCTTGACCCCTTT
TGCTGCCCTCTCATACAGGTTCGCCTTGTGCGTTGTTATGTGGCTTTGTTTAAAGGGTTGTTGCACAC------------
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>chr7D_1195
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--------------------------------------------------------------------------CACCGT
GACCGCCACGTGCTCCTAGTCATCCCCACCCCCTCTACATCGGCGTGTAACACTATAGATAAAACATTGTTGCTCAACTT
TTGGAGATTTGGATACTTGCGTTGAAGCATTGTGTCAGATGAGCAGTGCACATTTGAGAGCTAGGTAATGTATGCTTGCC
AATTAATTATGAAATATGGCGATGATATCCACACATTTCAGGTAAAATGTACATGAGTTTGTATTAGTTCATGAAAATGA
ACGGTTGCATAAAAACGAAATCACTACTACGATTTCTGATGTGTGTTTTTTAACGCTTTTACATTAGACAGATTGTTCTT
CTTTTACACGTCTTGTGAAGTAGAGCAAGAGAACCATCCCATAGGCTAAATATTTTTCAAGAAAGTGACCTTGGTGGGAA
AGACACTCGAAAATAGGACTAAGACTTTTTTTCCCAATTGTTTGGGCATGGTGTGAAAAATCCGATCATTCGAGTCTCCT
CGTACATCCAACTTCCATGGGTAATGGCTTTTCTTTATCTCTCATGTGTGCCAAATTTCTCAGTCTAAGTGTCATTGCTC
TCTGATGTTCAACTCCCTGTCCTTTGCCAATTAATGTTTTTCTGCTGGTTCTTTGATGTTCATGTTGATTTTCAGAATGT
TTTGGTTTAATTTTTTGATGCAAGCAACATGAGATCAGATATGATGGTATGTCTAGTCTCTCGTGCCTCAATTCATTTTT
AAAATTCATGATTTCTCAGTTCCATGAGGCTTGCCATAAGGTTACCTGTATGGAAAATTTGCTTGCTCTACATGTACTCC
CTCCGTCCGAAAATACTAGTCATCAAAATGAATAAAAATGAATGTATCTAGAACTAAAATATGTCTAGATACATCCCCTT
TTACTCATTTTGATGACAAGTATTTCCGGACGGAGGGAGTATGATTTTGCTCAGGTTTCAGAAGGATCATGCTAAGGTGT
ACTGATACGTCTCTAACATATCTATAGTTTTATATTATTTCATGCTATTATATATCATTCCTACATATTTTCCATCATTT
TATATTATTTTTGGACTAACATATTATTTAGTGCTCACTGCCAGTTGTTGTTTCCTACTTGTTTTTGGTTTTACAGAAAA
TCGATACCTACGAAGGTCCAAACACGATGCCATTTTTTGACGACTTTTTGTAGACCAAAAGGAACCCTCGAAGCTTTACT
AGTCATCAAGAGGAAGTTCAAGGGCCCCACAAGGGCAGACGACCCGGCCA-GGGGGTGGTTGCGCAACCTGGCCTTGTGG
GCTCCCTGAGTTTCCGTTTGACCTAATTCCTGGCCTATAAATACACATATATTCTGAAACCCTCAGAGCGACACCCGAAA
TGGTGGCAATCCTCATCAGGTAACAAGGTGGAGATTAAGATAAATCCCCCCAATA-CAATCAGCATCCCCTGCCTCATGT
ACATGGCGGCTTCTGGCATGATGAAGTACTTGGTAATATCCCCATGGATCAGGTGGTGATTA---CCCATAATGAGAACC
TGAGTGCCCCTTATGAAGGTGTACATGTTGCTATTGCTGATCCAGATAACCACAATGTTACTTTGGGTGACAATGTTGCA
GTACATGCTAATGTTGCAGTCATTGCAATTGATCATAATGTTGCAATACAACCAAATGCTCCTATGAACAATGATGCCAA
TGATCACAGAACTGTGCCTGGACTACCTCCTAGTAATGATATGAACAACAATACTGCTCCTGAGTTTATCCCTCTGCCTG
CTGCCTCTAGTCCTATATTTGTTCCTAGCAATGTCAACATGAACTACAATGATATTCCTTACTCCAGTAACATCCAATCT
GTTCATACTAGT--------------------------------------------------------------------
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>chr5D_2781
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--------TAGGTGAAGGAAATATGCCCTAGAGGCAATAATAAAGTTGTTATT-TAATATTT-CCTTATATCATGATAAA
TGTTTATTATCCATGCTAGAATTGTATTAACCGGAAACTTG-ATACATGTGTGGGTACATAGACAAAACACC-ATGTCTC
TAGTAAACCTCTACTAGACTAGCTCGTTAATCAAAGATGGTTAA-G-TTTCCTAACCATAGACATGTGTTTTCATTTGAT
GAATGGGATCACATCATTAGGAGAATGATGTGATGGAGATGACCCATCAGTTAGCTTGGCATTTTTGATCATTCAGTTTT
A-TTGCTATAGCTTTCTTCATGTCATATACATATTCCTTTGACTATGAGATTATGCAACTCCCGGATACCGGAGGAATAC
CTTGTGTGCTATCAAAGGTCACAACGTAACTAGGTGATTATAAAGATGCTCTACAGGTATCTCCGAAGGTGTTTTTTTGG
CTTGGCATAGATCGAGATTAGGATTTGTCACTCTCAGTATCGGAGAGGTATCTCTGGGCCCTCTCGGTAATGCACATCAT
AATAAAGCCTT-GCAAGCAATGTGACTAATGAGTTATTTGCG-GGATGATGTATTAGGGAACGAGTAAAAGAGACTTGCT
GGTAATGAGATTGAACTAGGTATGAAGATGAAGGAAATATGCCCTAGAGGCAATAATAAAGTTGTTATTTATATTTCCTT
ATATCATGATAAATGTTTATTATTCATGCTAGAATTGTATTAACCGGAAACTTAGTACATGTGTGAATACATAGAC-AAA
CAGAATGTCACTAGTATGCCTCTACTTGACTAGCTCGTTGAATCAAAGATGGTTAAGTTTCCTAACCATAGACAT-GAGT
TGTCATTTGATTAACGGGATCACATCATTAG-AGAATGATGTGATTGACTTGACCCATTCTGTTAGCTTAGCATT-TGAT
CGTTTAGTAT-GTTGCTATTGCTTTCTCCATGACTTATACATGTTCCTATGACTATGAGATTATGCAACTCCCGAATA--
>chr4D_2784
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-----------TTGAAGGAAATATGCCCTAGAGGCAATAATAAAGTTGTTATT--TATATTT-CCTTATATCATGATAAA
TGTTTATTATTCATGCTAGAATTGTATTAACCGGAAACTTG-ATACATGTGTGGATACATAGACAAAACACC-GTGTCCC
TAGTATGCCTCTACTTGACTAGCTCGTTGATCAAAGATGGTTAT-G-TTTCCTGACCATAGACATGTGTTGTCATTTGAT
GAACGGGATCACATCATTA-GAGAATGATGTAATGGACAAG-CCCATCCGTTAGCTTAGCATA-ATGATCGTTAAG-TTT
TGTTGCTATTGCATTCTTCATGACTTATACATATTCCTATGACTATGAGATTATGCAACTCCCGAATACCGGAGGAAAAC
CTTGTGTGCTATCAAACGTCACAACGTAACTGGGTGATTATAAAGATGCTCTACAGGTTTCTCCGAAGGTGTTTGTT-GG
GTTGGCATAGATCAAGATTAGGATTTGTCACTCCGAGTATCGGAGAGGTATCTCTGGGTCCTCTCGGTAATGCACATCAC
TAT-AAGCCTT-GCAAGCAATGTGACTAATGAGTTAGTTGCT-GGATGATGCATTACGGAACGAGT-AAAGATACTTGCC
GGTAACGAGATTGAACTAGGTATG----TGAAGGAAATATGCCCTAGAGGCAATAATAAAGTTATTATT--TATTTCCTT
ATATCATGATAAATGTTTATTATTCATGCTAGAATTGTATTAACCGGAAACATGATACATGTGTGAATACATAGAC-AAA
CAGAGTGTCACTAGTATGCCTCTACTTGACTAGCTCGTTGA-TCAAAGATGGTTATGTTTCCTAGCCATAGACAAAGAGT
TGTCATTTGATTAATGGGATCACATCATTAGGAGAATGATGTGGTTGACTTGACCCATTCCGTTAGCTTAGCACT-CGAT
CGTTTAGTAT-GTTGCTATTGCTTTCTTCATGACTTATACATGTTCCTATGACTATGATATTATGCAACCCCCGTTTACC
>chr4D_2784
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-----------TTGAAGGAAATATGCCCTAGAGGCAATAATAAAGTTGTTATT--TATATTT-CCTTATATCATGATAAA
TGTTTATTATTCATGCTAGAATTGTATTAACCGGAAACTTA-GTACATGTGTGCATACATAGACAAAACAGA-GTGTCCC
TAGTATGCCTCTACTTGACTAGCTCGTTGATCAAACATGGTTAT-G-TTTCCTGACCATAGACATGTGTTGTCATTTGAT
GAATGGGATCACATCATTA-GAGAATGATGTGATGGACAAGACCCATCCGTTAGCTTAGCATA-ATGATCGTTAAGTTTT
A-TTGCCATTGCTTTCTTCATGACTTATAAATATTCCTCTGACTATGAGATTATGCAACTCATGAATACCGGAGGAACAC
CTTGTGTGCTATCAAACGTCACAACGTAGCTGGGTGATTATAAATATGCTCTACAGGTGTCTCCGAAGGTGTTTGTT-GG
GTTGGCATAGATCAAGATTAGGATTTGTCACTCCGAGTACCGGAGAGGTATCTCTGGGCCCTCTCGGTAATGCACATCAG
TAT-AAGCCTT-GCAAGTAATGTGACTAATGAGTTAGTTGTG-CGATGTTGCATTACAAAACGAGT-AAAGAGACTTTCT
GGTAACGAGATTGAACTCGGCATG----TGAAGGAAATATGCCCTAGAGGCAATAATAAAGTTGTTATTTATATTTCCTT
ATATCATGATAAATGTTTATTATTCATGCTAGAATTGTATTAACCGGAAACTTAGTACATGTGTGAATACATAGAC-AAA
CAGAGTGTCCCTAGTATGCCTCTACTAGACTAGCTCGTTGA-TCAAACATGGTTAAGTTTCCTGACCATAGACAT-GTGT
TGTCATTTGATGAACGGGATCACATCATTAG-AAAATGATGTGATGTACAAGACCCAT-CCTTTAGCTTAGCGTAATGAT
CATTTAGTTTTATTGCTATTGCTTTCTTCATGACTTATACATGTTCCTCTGACTATGAGATTATGCAACTCCCGAATACC
>chr5A_2785
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------------TGATGGAAATATGCTCTAGAGGCAATAATAAAATGCTTATTATTATATTT-CCTTA-ATCATGATAAA
GGTTTATTATTCATGCTAGAATTGTATTGACCGGAAACTTAAATACATGTGTGGATACATAAACAATT-A-CCGTGTCCC
TAGTGAGCCTCTACTAGACTAGCTCGTTGATCAAAGATGGTTAA-GGTTTCCTAACCATAGACATGAGTTGCCATTTGAT
-AACGGGATCACATCATTAGGAGAATGATGTGATGGACAAGACCCATCCGTTAGATTAGCATA-TTGATCGTTCAG-TTT
A-TTGCTATTGCTTTCTTCCTGTCAAATACATATTCCTTCGACTATGAGATTATGCAACTCTCGGGTATCGGAGGAATAC
CTTGTGTGCTATCAAATGTCACAACATAACTGGGTGATTATAAAGATGCTCTATAGGTATCGCCGAAGGTGTTTGCT-GA
GTTGGCATAGATCGAGATTAGGATTTGTCACTCCGAGTATCGGAGGGGTATCTCTGGGCCCTCTCGGCAATACACATCAT
AA-G----CTT-GCAAGCAA-ATGACTAAGGAGTTAGTCATG-AGGTGATGTATTACGGAACGAGT-AAAGATACTTGCC
GGTAACGAGATTAAACTAG----G----TGAAGGAAATATGCCCTAGAGGCAATAATAAAGTTATTATTTATATTTCCTT
ATATCATGATAAATGTTTATTATTCATGCTAGAATTGTATTAACCGGAAACTTAGTACATGTGTGAATACATAGGC-AAA
CAGAGTGTCACTAGTTTGCCTCTACTTGACTAGCTCGTTGAATCAATGATGGTTATGTTTCCTAACCATAGACAT-GAGT
TGTCATTTGATTAACGGGATCACATCATTAG-AGAATGATGTGATTAACTTGACCCAT-CCGTTAGCTTAGCACGAGGAT
CATTTAGTTT-GTTGCTATTGCTTTCTCCATAACTTATACATGTTCCTATGACTATGAGATCATGCAACTCCCGAATACC
>chr5D_2785
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------------TGAAGGAAATATGCCCTAGAGGCAATAATACAGTTGTTATT-TTATATTT-CCTTAT-TCATGATAAA
GGTTTATTATTCATGCTAGAATTGTATTGATCGGAAACTTAAATAGATGTGTGAATACATAAACAAAT-A-C-GTGTCCC
TAGTAAGCCTCTACTAGACTAGCTCGTTGATCAAAGATGATTAA-GGTTTTCTAACCATGGACATGTGTTGTCATTTGAT
-AACTGGATCGCATCATTAGGAGAACGATGTGATGGACAAGACCCATCCGTTAGCTTGGCATA-TTGATCATTAAG-TTT
A-TTGCTATTGCTTTCTTAATGACAAATATATATTCCTTCGACTATGAGATTATGCAACTCCCGGATACCGGAGGAATAC
CTTGTGCGCTATCAAACGCCACAACGTAACTAGGTGATCATAAAGATGCTCTACAGGTATCTCCGAAGGTGTTTGCT-GA
GTTGGCATAGATTGAGATTATGATTTGTCACTCCGAGTATTGGAGAGGTATCTCTGGGCCCTGTCTGTAATACACATCAT
AA-G----CTT-GCAAGCAA-ACGACTAAGGAGTTAGTTACG-AGATGATGTATTACAAAACGAGT-AAAGAAACTTGCC
GGTAATGAGATTGAACTAGGTATG----TGAAGGAAATATGCCCTAGAGGCAATAATAAAGTTGTTATTTATATTTCCTT
ATACCATGACAAATGTTTATTATTCATGCTAGAATTGTATTAACCGAAAACTTAGTACATGTGTGAATACATAAACAAAA
CAAAGTGTCTCTAGTATGTCTCTACTTGACTAGCTCGTT-AACCAAAGATGGTTAAGTTTCCTAACCATAGACAT-GTGT
TGTCATTTGATAAACGGGATCACATCATTAG-AGAATGATGTGATGGACAAGACCCAT-CCATTAGCTTAGCATTATGAT
CGTTTAGTTTTATTGCTATTGCTTTCTTCATGACTTATACATGTTCCTCTGACTATGAGATTATGAAACTCCCAAATACC
>chr5D_2785
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------------TGAAGGAAATATGCCCTAGAGGCAATAATAAAGTTGTTATT--TATATTT-CCTTATATCATGATAAA
TGTTTATTATTCATGCTACAATTGTATTAACC-GAAAACTTAGTACATGTGTGAATACATAGACAAAACAGA-GTGTCCC
TAGTATGCCTCTACTTGACTAGCTCGTTAATCAAAGATGGTTAA-G-TTTCCTGACCATAGACATGTGTTGTCATTTGAT
AAACGGGATCACATCATTAGAA-AATGATGTGATGGACAAGACCCATCCGTTATCTTAGCATT-ATGATTGTTTAATTTT
A-TTGCTATTGCTTTCTTCATGACTTATACATGTTCCTCTGACTATGAGATTATGCAACTCCCGAATACCGGAGGAACAC
CTTGTGTGCTATCAAACGTCACAACGTAACTGGGTGATTATAAAGATGCTCTACAGGTGTCTCCGAAGGTGTTTGTT-GG
GTTGGCATAGATCAAGATTAGGATTTGTCACTCCGTGTATCGGAGAGGTATCTCTGGGCCCTCTCGGTAATGCACATCAC
TAT-AAGCCTT-GCAAGCAATGTGACTAATGAGTTAGTTGCG-GGATGATGCATTACGGAACGAGT-AAAGAGACTTGTC
GGAAACGAGATTGAACTAGGTATG----TGAAGGAAATATGCCCTAGAGGCAATAATAAAGTTATTATT--TATTTCCTT
ATATCATGATAAATGTTTATTATTCATGCTAGAATTGTATTAACCGGAAACATGATACATGTGTGAATACATAGAC-AAA
CAGAGTGTCACTAGTATGCCTCTACTTGACTAGCTCGTT-GATCAAAGATGGTTATGTTTCCTAGCCATAGACAT-GAGT
TGTCATTTGATTAACGGGATCATATCATTAGGAGAATGATGTGATTGACTTGACCCATTCCGTTAGCTTAGCACA-CGAT
CGTTTAGTAT-TCTGCTATTGCTTTCTTCATGACTTATACATGTTCCTATGACTATGAGATTATGCAACTCCCG------
>chr3B_2785
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------------TGAAGGAAATATGCCCTAGAGGCAATAATAAAGTTGTTATT-TTATATTTTCCTTAT-TCATGATAAA
GGTTTATTATTCATGCTAGAATTGTATTGACCGGAAACCTAAATACATGTGTGAATACATAAACAAAT-ACC-GTGTCCC
TAGTAAGCCTCTACTAGACTAACTCGTTAATCAAAGATGGTTAATG-TTTCTTAACCATGGACATGAATTGTCATTTGTT
-AAGGGGATCACATCATTAGGAGAGTGATATGATGAACAAGACCCATTCATTAGCTTAGCATA-ATGATCGTTCAGTTTT
A-TTGCTATTGCTTTCTTCATGTCAAATACATATTTCTTCGACTATGAGATTATGCAACTCCCGGATACTAGAGGAATGC
CTTGTGTGCTATCAAAAGTCACAACACAACTGGGTGATTATAAAGATGCTCTACATGTATCTCCGAAGGTATTTGTT-GA
GTTGGCATAGATCGAGATTACGATTTGTCACTCCGAGTATCGGAGAGGTATCTCTGTGCCCTCTCGGTAATACACATCAT
AA-G----CTTTGCAAGCAA-ATGACTAAGGAGTTAGTCACA-AGGTGATGTATTACAGAACGAGT-AGAGAGACTTGCC
GGTAACGAGATTGAACTAGGTATG----TGAAGGAAATATGCCCTAGAGGCAATAATAAAGTTATTATT--TATTTCCTT
ATATCATGATAAATGTTTATTATTCATGCTAGAATTGTATTAACCGGAAACATGATACATGTGTGAATACATAGAC-AAA
CATAACGTCACTAGTATGCCTCTACTTGACTAGCTCATT-AATCAAAGATGGTTATGTTTCCTAACCATAGACAT-GTGT
TGTCATTTGATTAACGGGATCACATCATTAGGAGAATGATGTGATTGACATGACCCATTCCGTTAGCCTAGCACT-TGAT
CGTTTAGTAT-GTTGCTATTGCTTTCTTCATGACTTATACATGTTCCTGTAACTATGAGATTATGCAACTCCCGTTTACC
>chr7D_2785
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------------TGAAGGAAATATGCCCTAGAGGCAATAATAAAGTTGTTATTTC--TATTT-CCTTATATCATGATAAA
TGTTTATTATTCATGCTAGATTTGTATTAACCGGAAACTTC-GTACATGTGTGAATACATAGACAAAACAAA-GTGTCCC
TAGTATGCCTCTACTTGGCTAGCTCGTTAATCAAAGATGGTTAA-G-TTTCCTGACCATAGACATGTGTTTTCATTTGAT
GAACGGGATCACATCATTAGGAGAATGATGTGATGGACAAGACCCATCCGTTAGCTTAGCATT-ATGATCATTTAGTTTT
A-TTGCTATTGCTTTCTTCATGACTTATACATATTCCTCTGACTATGAGATTATGCAACTCCCGAATACCGGAGGAACAC
CTTGTGTGCTATCACACGTCACAACGTAACTGGATGATTATAAAGATGCTCTACAGGTGTCTCCGAAGGTGTTTGTT-GG
GTTGACATAGATCAAGATTAGGATTTATCACTTCGTGTATCGGAGAGGTATCTCTGGGCCCTCTCGGTAATGCACATCAC
TAT-AAGCCTT-GCAAGCAATGTAACTAATGAGTTAGTTGAG-GGATGATGCAGTACAGAACAAGT-AAAGAGACTTGCC
GGTAACGAGATTGAACTAGGTATG----TGAAGGAAATATGCCCTAGAGGCAATAATAAAGTTATTATT--TATTTCCTT
ATATCATGATAAATGTTTATTATTCATGCTAGAATTGTATTAACCGGAAACTTAGTACATGTGTGAATACATAGAC-AAA
CAGAGTGTCACTAGTATGCCTCTACTAGACTAGCTCGTT-GATCAAAGATGGTTATGTTTCCTAGCCATAGACAT-GAGT
TGTCATTTGATTAACGGGATCACATCATTAGGAGAATGACGTTATTGACTTGACCCATTCCGTTAGCTTAGCACT-TGAT
CGTTTAGTAT-GTTGCTATTGCTTTCTTCATGACTTATACATGTTCCTATGACTATGAGATTATGCAACTCCCGTTTACC
>chr4A_2786
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-------------GAAGGAAATATGCCCTAGAGGCAATAATAAAGTTGTTATT-TTATATTT-CCTTATATCATTATAAA
TGTTTATTATTCATGTTAGAATTGTATTAACTGGAAACTTG-ATACATGTGTGGATACATAGATAAAACATC-GCGTCCC
TAGTAAGCCTCTACTAGACTAGCTCGTTAATCAAAGATGGTTAA-G-TTTCCTAACCATAGACATGTGTTGTCATTTGAT
GAACGGGATCACATCATTAGGAGAATAATGTGATGGACAAGACCCATCCGTTAGCTTAGCATA-TTGACTGTTCAGTTTT
A-TTGTTATTGCTTTCTTCATGTCAAATACATATTCCTTCGACTATGAGATTATGCAACTCCCGGATACCGGAGGAATAC
CTTGTGTGCTATCAAACATCACAACTTAACTGGGTGATTATAAATATGCTCTACAGGTATCTCCGAAGGTGTTTGTT-GG
GTTGGCATATATCGAGATTAGGATTTGTCACTCCTTGTATCGGAGAGGTATCTCTGAGCCCTCTTGGTAATGCACATCAC
-ATGAAGCCTT-GCAAGCAACATGACTAATGAGTTACTTACAAAGATGATGTATTACAGAACGAGT-AAAGAGACTTGCC
AGTAACGAGATTGAGCTAGGTAT-----TGAAGGAAATATGCCCTAGAGGCAATAATAAAGTTCTTATTTATATTTCCTT
ATATCATGATAAATGTTTATTATTAATGATATAATTGTATTAACCGGAAACTTAGTACATGTGTGAATACATAGAC-AAA
CAGAGTGTCACTAGTATGCCTCTACTTGACTAGCTCGTT-AATCAAAGATGGTTAAGTTTCCTAGCCATAGACAT-GAGT
TGTCATTTGATGAACGAGATCACATCATTAT-AGAATGATGTGATTGACTTGACCCAT-CCGTTAGCTTAGCACTATGAT
CGTTTAGTTT-ATTGCTATTGCTTTCTCCTTAACTTATACATGTTCCTATGACTAAGAGAGTATGCAGCTCCCGAACACC
>SNPs
SS--SSSSSSSSSSSS----S----------------------S-------S----S--S-S-----S--S---------
--------------S-S-------------------------------S----S--------S---------------S-
S------------S---------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSS----S------S-S-----S----------S-----------------------SSS---
------S------------SSSSSSSSSSSSSSSSSS---S------S--------S--------------SS-----S-
--S-----------------S------SS-----------S-----------S-S-------------S-----------
------------------S-----S------------------SS-------------S-----------S---------
-S----------------S---S---------S----S------------S-S----SS---------SSSSSS------
------------------------S--S--SS------------S-----------------------------------
-------S---S-------------SS---------S----S-S----------------------------SS-S--S-
-------S-----------------------S------------------------------------------------
-S---------S---S-------------S-------------------S------------------------------
-----------S-------S---------S---S--------S-------------------------------------
--------S---------------S----------S-----------------SS-S-----S--------S--------
----S-----S--------------------------------------------------------------S------
-------------------------------S------------S--------------S--------------------
-------S------S---------S----S-------S-----------S--SS---S---S-S---------------S
S---------SS------------S-S-S-----S---S---SSSSSSSSS--------------------S--------
--------------------------------------------------------------------------------
-------------------------------------------------------------SSS-S--------------
--------------------------------------------------------------------------------
-----------------------------------------------------SSS----------S------S------
-----------S----------S---------S----------------S-----S----SS-S-----S---S--S-S-
-------S-----------S-----S------------S--S----S---S--------S-S---S--------------
-----------S--SS----S--S-------------S-----------------S---------S----------S--S
--------------------S-----------S--S---------SS---SS-SSS----------S-------------
--------------S---S------S------------------------------------SSS----S--------S-
-SS-----------------------------S---------S----------------S--------------------
---------S------------S----S-----------------S------------------S---------------
------S--S--------------S------SS--------------S--------S-----------------------
-------S--------------------------------------S-------------S---S-----SSSS------
S--------------------------------------------------------------------S------S---
--S------------------------------------------------------S----------------------
--------------------------------------------------------------------------------
------------------------------------S-------------------------------------------
-----S---------------------S------------S---------------------------------------
--------------------------------------------------------------S-----------------
--------------------------S---------------S-------------------------------------
--------------------S---------------------------------------------------S-------
-------------------------------------------------------S------------------------
------------------------------------------------S--------------------S----------
----------S------------------------------S--------------------------------------
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>forward_743
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---GCAACATCGATCCCAATGCC---------------------------------------------------------
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>reverse_2408
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-------GAGAGGAAGTTCGAGGGCAC-----------------------------------------------------
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>forward_928
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----------------------------GTGGGCCAATGGTAGAGCTT--------------------------------
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>reverse_2627
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------------------------------------------------------------------TCCCTGCCTCATGT
ACATGG--------------------------------------------------------------------------
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>forward_2496
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----------------------------------------------------------------------------GTGG
GCTCCCTGAGTCTCTA----------------------------------------------------------------
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>reverse_3317
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------------------------------------GCAAGACCCATCCATTAGCT------------------------
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