>input_sequence_43546
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----------------------------------------------------------ATGGATCGTTCATCAGATAAGC
AGCCACCAACCATTCATACGGTCGTGGTCACGGCCATGGCTTCCTCCTTCTCCAAACGCTCCCTATGCCTCCTCCTCCTC
CTGGCCGTCTTCCTCCATGGCTCGTCCGGCACGTCCCGCTCGGCCACCGAGGACACTGACCCGATGACGTCGCGGACGAT
GGAGCAGCGATTCCGGCGATGGAAGGCGGAGCACAACCGGACCTATTCCACCCCGGAGGAAGAGCGCCACCGCCTCCGCG
TCTACGCCGACAACATGCGCTACATCGAGGCCACCAACGACGACGCCGGCGCCGGGCTCACCTACGAGCTCGGCGAGACC
GCCTACACCGACCTCACCAGCGACGAGTTCATGGCCATGTACACGTCGCGGGCGCCGCCCCTCTCGGACGACGACGAC--
-GCGACGATGATGATGATCACCACCCGCGCCGGCCCGATCGACGCCGGTGGCCGCCGGCAGCAGGTGTACGTGAACGAGT
CGGCCGGCGCGCCGGCGAGCGTTGACTGGCGAAAGAGAGGCGCCGTCACGGCGGTGAAGAACCAAGGCCAGTGCGGTACG
T-----TACGCTACGTGGATGGTGGGCCGTCGCCATCCACGTATCCATCGTTCATTTCTTCCCTTGGTCTCCAATTATTG
TGTCCTCCTCCCTGTAAACACATGGCTGTCTGCGATCCACATGCTTGCATGTGCTCCTGCTGCCTG------------GC
TAGCTGCTTCATCATTAGGGATTACACAATTGCTTACTTAACTGTCATACACACTGTTAATTGTCAACTGAGCATTATAG
TATTAGACAGTTGGCCAATTTGC-GGGGTCTCTTGTGGATGTATTCACACCTAATATGCAGAAA----------------
-------------AAAAAAGAAGCATTTCCTTGTCGGTGGGGTCCAGGGTTTGAAATTTCAAAAAGAAAAGGTTTTTAGA
CCTTATCGAACTGACCGGTTTTTATTTTTGTTGGAAATGATTCGAATAACATCACCATATTTTAAGGGTTTTTTAATGAA
AAGTTGAATCCATTTGAAATACACTTATAATTTTAAAAT-A-----TATATTACGGTGACCATCAATTTTTTTTGTCAAA
GTTTGAACCTTGTGATGGTCGATCATATGATTTGAGGGACAATATAAGCGGCTATCAAATTTTATCTCATAGTTCTTGTG
TGTGTTATAAATTCATTATCTTTGACAGGATCGTGTTGGGCATTCTCCACCGTAGCGGTGGTCGAAGGAATCTACCAAAT
CCAGACTGGGAAACTTGCCTCGCTCTCAGAGCAAGAGCTGGTGGACTGCGACAAGTTGGACCATGGTTGCAATGGTGGAG
TGAGCTATCGTGCGCTGCAGTGGATCACCTCCAACGGCGGCATCACCTCCCAGGAAGACTATCCATACACGGCAAAGGAC
GACACTTGTGACACCACAAAGCTTTCGCACCATGCCGCTTCCATCTCAGGCTTCCAACGTGTGGCAACGAGGAGCGAGCT
ATCGTTGACAAACGCGGTGGTCATGCAGCCCGTGGCGGTGTCGATCGAGGCTGGCGGAGCCAACTTCCAGCACTACCGGA
ATGGCGTGTACAATGGTCCATGTGGGACGCGGCTGAACCATGGCGTCACGGTGGTAGGGTATGGGGAGGACGAGGTGACT
GGGGAGAGTTACTGGATCGTGAAGAACTCATGGGGTGAGAAGTGGGGGGATAGTGGGTACCTCAGAATGAAGAAGGGCAT
CATAGACAAGCCCGAGGGGATCTGCGGCATTGCCATCCGGCCATCTTTCCCGTTCATGTGA-------------------
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----------------------------------------------------------
>chr5A_1_TraesCS5A01G365800
TACAAGGAAT-TGCTATAGTTGCCCTCTATGGTGGACATAGAGATGATTTGAGTGTGGCATATTTCAGGATAACTGTTTT
TCAGTCTGCACAAACATGACAAAACTTAGCAGTATTGACAATTCAGTAGCTAGTTCGGCAAAAATCTCTCAAGCAAGCAA
TAGCTCACTCACTGATCTCACTTGTGAAAAAAGGGGCGACCTATTCACCAGATATCTGAAAACAAACACTCAGTTTCTTC
TTCTTGCGCATGATGTTTTGCGTCCCAGGCCGCCGATTACCGCCAGCCGGATTACCACCCCAGTGGCGTAGCCAGGCCCT
AGGCTACA--------GAGGCCATGGCATTGGGCGTGGCTGCTCGATCGATTGTTCGTTGACTGTAGCTAGAAAACACTA
TCTTGACACTGTTCAGTACTGTACACAGC-TGTTGGCCCGCGGCGTGTTCCCAAGCTAGCTATG-AACTGACGTGGGTGG
ATTTTTGGAACCCCG-TGTATTGGAGGATCTTATTTTAAATACTTTAAAAATCACATTTGAAGTTCCAAAAAAATCCAAA
AAGAATGCTACATGATCATATGGATGTATACTACATACGTATGTGTAAAGTTTGTCGATGAAATAAGTAAACATGTAAGC
TATACAAAAATAATAAAAAGCACTATTCATCTTTCCAAAATCAGGATTTAGTCATTTTTATGTAACTCACATGGTTACTT
ATTTGCACATCAAAATTTGCACATGTTTAATATACATCCATATAAACATGTTGATTTATTTTCAGAAATTTTTTGGAACT
TTAAAATAACAATTTTGCACTAATAAAAATATAGGATTTCAATGCACCCGTCCTCTAAAATGACTTTTTGACGCAAGTAA
AATTTTCAGGTA--CCTCATGTTTAGCAAATGCGTGAAAAA-AAAGACACTCGATGACCGCACACGACTGGCACGACTGA
CATTCTTGTACCCACACATCAAACC-GTTGCGCAGTTGTACCTC--TATATAAGCGTGATGGATCGTTCATCAGATAAGC
AGCCACCAACCATTCATACGGTCGTGGTCACGGCCATGGCTTCCTCCTTCTCCAAACGCTCCCTATGCCTCCTCCTCCTC
CTGGCCGTCTTCCTCCATGGCTCGTCCGGCACGTCCCGCTCGGCCACCGAGGACACTGACCCGATGACGTCGCGGACGAT
GGAGCAGCGATTCCGGCGATGGAAGGCGGAGCACAACCGGACCTATTCCACCCCGGAGGAAGAGCGCCACCGCCTCCGCG
TCTACGCCGACAACATGCGCTACATCGAGGCCACCAACGACGACGCCGGCGCCGGGCTCACCTACGAGCTCGGCGAGACC
GCCTACACCGACCTCACCAGCGACGAGTTCATGGCCATGTACACGTCGCGGGCGCCGCCCCTCTCGGACGACGACGAC--
-GCGACGATGATGATGATCACCACCCGCGCCGGCCCGATCGACGCCGGTGGCCGCCGGCAGCAGGTGTACGTGAACGAGT
CGGCCGGCGCGCCGGCGAGCGTTGACTGGCGAAAGAGAGGCGCCGTCACGGCGGTGAAGAACCAAGGCCAGTGCGGTACG
T-----TACGCTACGTGGATGGTGGGCCGTCGCCATCCACGTATCCATCGTTCATTTCTTCCCTTGGTCTCCAATTATTG
TGTCCTCCTCCCTGTAAACACATGGCTGTCTGCGATCCACATGCTTGCATGTGCTCCTGCTGCCTG------------GC
TAGCTGCTTCATCATTAGGGATTACACAATTGCTTACTTAACTGTCATACACACTGTTAATTGTCAACTGAGCATTATAG
TATTAGACAGTTGGCCAATTTGC-GGGGTCTCTTGTGGATGTATTCACACCTAATATGCAGAAA----------------
-------------AAAAAAGAAGCATTTCCTTGTCGGTGGGGTCCAGGGTTTGAAATTTCAAAAAGAAAAGGTTTTTAGA
CCTTATCGAACTGACCGGTTTTTATTTTTGTTGGAAATGATTCGAATAACATCACCATATTTTAAGGGTTTTTTAATGAA
AAGTTGAATCCATTTGAAATACACTTATAATTTTAAAAT-A-----TATATTACGGTGACCATCAATTTTTTTTGTCAAA
GTTTGAACCTTGTGATGGTCGATCATATGATTTGAGGGACAATATAAGCGGCTATCAAATTTTATCTCATAGTTCTTGTG
TGTGTTATAAATTCATTATCTTTGACAGGATCGTGTTGGGCATTCTCCACCGTAGCGGTGGTCGAAGGAATCTACCAAAT
CCAGACTGGGAAACTTGCCTCGCTCTCAGAGCAAGAGCTGGTGGACTGCGACAAGTTGGACCATGGTTGCAATGGTGGAG
TGAGCTATCGTGCGCTGCAGTGGATCACCTCCAACGGCGGCATCACCTCCCAGGAAGACTATCCATACACGGCAAAGGAC
GACACTTGTGACACCACAAAGCTTTCGCACCATGCCGCTTCCATCTCAGGCTTCCAACGTGTGGCAACGAGGAGCGAGCT
ATCGTTGACAAACGCGGTGGTCATGCAGCCCGTGGCGGTGTCGATCGAGGCTGGCGGAGCCAACTTCCAGCACTACCGGA
ATGGCGTGTACAATGGTCCATGTGGGACGCGGCTGAACCATGGCGTCACGGTGGTAGGGTATGGGGAGGACGAGGTGACT
GGGGAGAGTTACTGGATCGTGAAGAACTCATGGGGTGAGAAGTGGGGGGATAGTGGGTACCTCAGAATGAAGAAGGGCAT
CATAGACAAGCCCGAGGGGATCTGCGGCATTGCCATCCGGCCATCTTTCCCGTTCATGTGATGTGATCATGTGTGGTGTG
GTGGGTTCATTGTTCTTTCCCTAGCAGGGGCCAAAGCTTAGCCAACTTGTTGTTACAAGTACGATACTTGTAAGGTAGTT
AATACGTGCTTGTAAAAATGGGAGTATATTCAAACATTTGTGAATAATAAACATGGGAATTGCTTGAATTGTTCATGTGG
ATTCAGCACTTTTATGATTTTTCTATGAGCTTTTAGGCTTTTTGGTGGATTTGGTTGTCCAATAGGTCAAGTCACTTTTT
GTGTGGGCCTGACTGGTGCAAACTTTATGGAATTTAGAAGCTACATGTGGTACAGCGAGATTGAGATGACTATAGGGACC
CCCTATACGCCG--------------------------------------------------------------------
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---------------------------------CTCACCTGGGCCGGTCCATTTGCAGTGCACGGGGTGGCACGCGTTAG
TGACGTGATAAAAAGAAGAAAAAGGAACGTGCGGGCACTGGGAATCGAACACACGTCCTGCAAGTAGCGGAAGCTTGCGC
ACCGTGCTAG-CACTACGTGAGGCAAGTTTTAGTATTAGATTGGCAGCG---TACTTAAAGAACTAAACGACACCGGCAA
ATTTAAACCCCC-GCAGCACAAATTCCCATAAGCACAACTCTGTGCGAGGGATTGAACCGAGGTCTTCTTTCTAGTG-A-
CACTGTTGCTAGCCACCATCATTACTTTGATTAGGTGTCTAAAATGGCAGCCCCATGTATATTAACTATAAGCCACAATT
GTGATTTTCTTTTTGAAAACAGCAACTATTTTTTAAAACACAAAATATTTCTAATTGCTGAACATATTTATAAAAAATCG
AACTTTTCATGAAACCCAAACAATTTTTTTAAAAGAA---ACAAATTTCAAAGGAAGAACA-TTTTTTAAAATTAAGAAT
AAAACTTTGAAAATGCT-AACA-TTTTTTAGAAAACAAAAACAAATTAATAATTCAA---TTTCCTTTTCAAATCACGAA
CAAATTTATCAAGATGCATTTTTTAAAAAATTCGCTGATTTTTTTTTCTGAATTGATG
>chr5B_1
TACAAGGAAACTGCTATAGTTGCCCTCTATGGTGGACATAGAGATGATTTGAGTGTGGCATATTTCAGGATAACTGTTTT
ACAGTGTGCACAAACATGACAAGACTTAGCAGTATTGACAATTGAGTAGCTAGTTCGGCAAAAATCTCTCAAGCAAGCAA
TAGCTCGCTCACTGATCTCACTTGTGAAAAAAGGGGCGACTTATTCACCAGATACCTAAAAACAAATACTCCGCTTCTTC
TTCCTGCGCATGATGTTTTGCGTCCCACGCTGCCGATTATCGCCAGCCGGACTACCACCCCAGTGGCGTAGCCAGGCCCT
AGGCTACAGGGGCCATGAGCCCATGACATTGGGCGTGGCTGCTCGATTATTAGTTGG----CTGTAGCTAGAAAACACTA
TTTTGACACTGTTCAGTACTGTACAAAGGTTGTTGGCCCGCGGCGTGTTCCCAAGCTAGCTATGCAACTGACACGAGTGG
ATTTTTGAAACCCGGCTGTATTGGAGGATCTTATTTTAAATACTTTAAAAATCACATTT---------------------
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------------------------------------AAAAA-AAAGACACTCGGTGACCGCACACAACTGGCACGACTGA
CATTCTTGTACCCACCCATCAAAACAGTGGCGCTGTTGTACCTCTATATAAA--CGTGATGGATCGTTCATCAGATAAGC
TGCCACCAACCATTCATAACGTCGTGGTCACGGCCATGGCTTCCTCCTTCTCCAGACGCTTCCTATGCCTCCTTCTCCTC
CTGGCCGTCTGCCTCCATGGCTCCCCCGCCACGTCCCGCCCGGCCACCGAGGGCACTGACCCGATGACGCTGTGGATGAT
GGAGCAGCGATTCCGGCGATGGAAGGCGGAGCACAACCGGACCTACGCCACCCCGGAGGAAGAACGCCACCGGCTCCGCG
TCTACGCCCGCAACGTGCGCTACATCGAGGCCACCAACGACGACGCCGGCGCCGGGCTCACCTACGAGCTCGGCGAGACC
GCCTACACCGACCTCACCAGCGACGAGTTCATGGCCATGTACACGTCGCGGGCGCCGCCCCTCTCCAACGACGACGACGA
AGCGCCGATGATGATGATCACCACCCGCGCCGGCCCGGTCGACGCCGGTGGCCGCCGGCAGCAGGTGTACGTGAACGAGT
CGGCCGGGGCGCCGGCGAGCGTTGACTGGCGAGAGAGAGGCGCCGTCACGGCGGTGAAGAACCAAGGGCAGTGCGGTACG
TTACGCTACGCTACGTGGATGGTGGGCCGTCGCCATCCACGTATCCATCGTTCATTTCTTCCCTTGGTCTCCAATTATCG
TCACCTCCTCCCTGTAAACACATGGCTGTCTGTAATCCACATGCTTGCATGTGCTCCTGCTGGCCGCTGCCTAGCTTAGC
TAGCTGCTTCATCATTAGGGATCAGACAATTGCTCACTTAACTGTCATGCACACTGTTAATTGTCAACTTAGCATTATAG
TATTAGACAGTTGGCCAATTTGC-GGGGTCTCTTGTGGATGTATTCACACCTAATATGCAGGAA----------------
-------------AAAAAAGCATTTCCTGGCAGGT-----GGTCCAGGGTTTGAAATTTCGAAAAGAAAAG-TTTTTGGA
CCTTAACGAACTGACCGGTTTTCATTTTTTA--GAAATTATTCAAATAACATCATCATAGTCTAAGGTTTTTATAATGAA
AAGTTTAATTCATTTGAAATATACTTATAATTTTAAAATAAATATGTATATTACAGTGACCATCAATTTTTTTTGTCAA-
-TTTGAACCTTTTGATGGTCGATCATATGATTTGAGGAACAATATAAACACCTATCTAATTTCTCTTGCAGTC-CTTATG
TATGTTCTAAATTCATTATCTTTGACAGGATCATGTTGGGCATTCTCCACTGTAGCAGTGGTCGAAGGAATCCACCAAAT
CCAGACCGGGAAACTTGCCTCACTCTCAGAGCAAGAACTGGTGGACTGTGATAAGTTGGACCATGGTTGCAACGGCGGAG
TGAGCTATCGTGCGCTGCAGTGGATCACTTCGAACGGCGGCATCACCTCCGAGGACAACTATCCATATACGGCAAAGGAC
GACACTTGTGACACCACAAAGCTTTCACACCATGTTGCTTCCATCTCAGGCTTCCAACGTGTGGCAACAAGGAGCGAGCT
ATCATTGACAAACGCGGTGGCCATGCAGCCTGTGGCGGTGTCGATCGAGGCTGGTGGGGCCAACTTCCAGCACTACAGGA
ATGGTGTGTACAATGGCCCATGCGGGACACGGCTGAACCACGGCGTCACAGTGGTCGGGTATGGGGAGGATGAGGTGACT
GGGGAGAGTTACTGGATCGTGAAGAACTCGTGGGGTGAGAAGTGGGGCGATAGTGGGTACCTCAGAATGAAGAAGGACAT
CATAGACAAGCCCGAGGGGATCTGCGGCATCGCCATTCGGCCATCTTTCCCGTTCATGTGATGTGATCATGTGTGGTGTG
CTTGGTTCATTGTTCTTTCCCTAGCAG--ACCAAAGCGTAGTCAACTTGTTATTACAAGTACAATACTTGTAAGGTATTT
AATACATGCTTCTAAAAATGGGAGTATATTCAAACATTTGTGAATAATAAACATGGGAATTCCTTGAATTGTTCATGTGG
ATTCAGCATTTTAATGATTTTTCTATGAGCTTTTAGGCTTTTTAGTGGACTTGGGTGTCCAATAGGTCAAGTCAACTGTT
TG------------------------------------------------------------------------------
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>chr5D_856
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-------------------------------------------------------------------TTGACGCACGTGA
AAATTTCAAGTATACCTATTGTTTAACAAACGCGTAAAGAAAAAAGATACTCCCTGACCGCACACAACTGGCACGACTGA
CATTCTTGTACCCACCCATC-AAACAGTTGCGCAGTTGTACCTCTATATATAAGCGTGATGGATCGTTCATCGGATAAGC
TGCCACCAACCATTCATAACGTCGTGGTCACGGCCATGGATTCCTCCTTCTCCAGACGCTCCCTATGCCTCCTCCTCCT-
--GGCCGTCTGCCTCCATGGCTCCCCCGCCACGTCCCGCCCGGCCACCAAGGACACTGACCCGATGACGCTGCGGATGAT
GGAGCAGCGATTCCGGCGATGGAAGGCGGAGCACAACCGGACCTATTCCACCCCGGAGGAAGAGCGCCACCGGCTCCGCG
TCTACGCCCACAACGTGCGCTACATCGAGGCCACCAACGAGGACGCCGGCGCCGGGCTCACCTACGAGCTCGGCGAGACC
GCCTACACCGACCTCACCAGCGACGAGTTCATGGCCATGTACACGTCGCGGGCGCCGCCCCTCTCGGACGACGACGACG-
--CGCCGATGATGATGATCACCACCCGCGCCGGGCCGGTCGACGCCGGTGGACGGCGGCAGCAGGTGTACGTGAACGAGT
CGGCCGGCGCGCCGGCGAGCGTTGACTGGCGCGAGAGAGGCGCCGTCACGGCGGTGAAGAACCAAGGCCAGTGCGGTACG
TTACGCTACGCTACGTGGATGGTGGGCCGTCGCCATCCACGTATCCATCGTTCATTTCTTCCCTTGGTCTCCAATTATTG
TCACCTCCTCCCTGTAAACACATGGCTGTCTGTAATCCACATGCTTGCATGTGCTCCTGCTGGCCGCTGCCTAGCTTAG-
---CTGCTTCATCATTAGGGATTAGACAATTGCTTACTTAACTGTCATGCACACTGTTAATTGTCAACTTAGCATTATAG
TATTAGACAGTTGGCCAATTTTGTGGGGTCTCTTGTGGATGTATTCACACCTAACATGCAGAAAATTGTCTACAAAAAAA
CCTAACATGCAGAAAAAAAAAAGCATTTCCATCATTGCCGG---------------------------------------
--------------CCGGTTTTTATTTTTTA--GATATTATTCGAATAACATCATCATACTCTAAG-TTTTTTTAATGAA
AAGTTTAATTCATTGGAA-TATACTTATAATTTAAAGTAAA-----TATATTACAATGACCATCG--TTTTTTTGTCAA-
-TTTGAGCCTTTTTATGGTCGATCATATGATTTGAGGAACAATGTAAATGACTATCTAATTTTATCTTGTAGTTCTTATG
TATGTACTAAACTCATTATCTTTGACAGGATCGTGTTGGGCATTCTCCACCGTAGCGGTGGTCGAAGGAATCTACCAAAT
CCAAACTGGGAAACTTGCCTCGCTCTCAGAGCAAGAGCTGGTGGACTGCGACAAGTTGGACCATGGTTGCAATGGTGGAG
TGAGCTATCGTGCGCTGCAGTGGATCACCTCCAACGGCGGCATCACCTCCCAGGAAGACTATCCATATACAGCAAAGGAT
GACACTTGTGACACCACAAAGCTTTCGCACCATGCCGCTTCCATCTCAGGCTTCCAACGTGTGGCAACGAGGAGCGAGCT
ATCGTTGACAAACGCGGTGGCCATGCAACCCGTGGCGGTGTCGATAGAGGCTGGCGGAGCCAACTTCCAGCACTACCGGA
ATGGCGTGTACAATGGTCCATGTGGGACGCGGCTGAACCATGGCGTTACGGTGGTAGGGTACGGGGAGGACGAAGTGACT
GGGGAAAGTTACTGGATCGTGAAGAACTCGTGGGGTGAGAAGTGGGGCGATAGTGGGTACCTCAGAATGAAGAAGGGCAT
CATAGACAAGCCCGAGGGGATATGCGGCATCGCCATTCGGCCATCTTTCCCGTTCATGTGATGTGATCATGTGTGGCGTG
CTTGGTTCATTGTTCTTTCCCTAGCAG--GCCAAAGCTTAGTCAACTTGTTGTTACAAGTACAATACTTGTAAGGTAGTT
AATACGTGCTTGTAAACATGGGAGTATATTCAAACATTTGTGAATAATAAACATGGGAATTGCTTGAATTGTACGTGTGG
ATTCAGCACTTTAATGATTTTTCTATGAGCTTTTAGGCTTTTTAGTGGATTTGGGTGTCCAATAGGTCAAGTCACTTTTT
ATGTGGGCCGGACTGGTGCAAACTCTTTGGAATTTAGAAGCTACATGTCGTACAGTGAGATTGAGATGACTATAGGGACC
CGAGCTCCTCTTGGGCGCCCTCAGCGCCGCTTAGTCTAGTGAGCGCTCGAAGGCGAGCCATAGTGGGCCGGCCCAGCATC
GGTCGCCTCACAGAAAAAAAAGTTCACTGCTATTATTCCGTGAGACGTGGGTTTCGAAACTGCATGCCTACGCCTGCAGG
GTTGTTGCACTGACCACTCGACCACAACAACGTCGATGAATTATATCGGAAAATAGCGCTACTTGAAAGAGGTTTCTATC
CCAGTTATGATTTTTCGAAAAAAGAAAACGTAAATATGAAACCGAATTCACGAATATTAAAAATGTTCATCGATTCTGAA
AAAAGAATTCACGAATTTGCCAAAAGAATGTTCAAAAAATTGAAAAAAATTCACCGGATTTCAGACAAAGTCCACGAATA
TGAAAAACGTTCACCGGATTTTGAAAAAAAGTTCATCGATTTTGACAAAAAAATTCAAGAATTTAAAAAAAGTTCACCAT
ATTCTGAAAAAAGGTTCACTTGTTTGAACAATGTTCATCGATTTTGCTAAAACGATGAAAATTTTGAAAAAAAAAATCAT
CGATTTTGAAAGCAGGTTAACGGATTTTCAGAAAAGGTTCATCAATTTTGGAAAAAAAGTTCATGAATTCTAGAAAGTTT
ACCGATTTTGAAAAATAGTTCATCAATTTTGTGAAAAAGTTCATCGAATTTGGAAAAAGTTCATCAAATTTGAAAAAGAG
GTTCATCGAATTTGAAAAAAGTTCATCAAATTCGAAAAAAAGTTTATCAAATTCAAAAAAAGTTCATCGAATTAAAAAAA
AGTCCATCAAATATGGAAAAATTTCATTGAATTTGAAAAAACAGATCATCCATTTTGTAGAAAAAAAACATAAAGAAAAA
GAAAAATTCTCGAATTTGAAATAGAAAATGGGGATTGCTACGCGTCCGCCGGAGGATCTTTTAGAAAGATCCGCCGGCTC
GCGAGCCGTTGGATTTATACAATGGATCAGCTAAATATCTTTCTCTACTTCGCAACAAAGAACTTGTTGCGGAAACATTT
TTAACAAGGGTTATATTGCTGGTTTTTTGCAACATAGGTTGTATTGCGGGATTTTTTTTTGCAACATGGGTCGTGTTGTA
GGATTTTTTTTGTAACATCGGTCATGTTGCAGAAAAAAATTGCCCTCCCTAGTGTGAGCTGCAACAGTATCTAGCCGCTG
GCCGGTTTGCAACTAGGGGCTAATTGCGGAATCCCTTTCAGAAACAATGGACCAGTTGCAGAAAGAGGACACAGATAGGG
TAGCTCCCCACCGTTGACTAAGAATTCATCTGACAGACATAAAGACGGCGGACGCTCGCACAAATTCGATCGGTTGAAGG
GAATCTTTTCCCAAAGAAAATTTGGAAAAAGGGAAAAAGAAACGACAGAAGTATAAAGGATAAAAAAGATGTAACTTATC
ACAGACGGGGAAGTGTCGCGGTGGTTATTTCATCCTCCCTCGATGTTGAAGGTCGCAGGTTCGATTCACCTTCCATCGCC
CTTGTTTGCGGGATAAAAACATATAACGGAAGGGGGAGATGGGCCGGCCTATTAGTAGTGAAGGGAGGGAGTAGGGGTGT
GCGCCCGTTTGCGGAAACCACTGTATCAGGCGCTAAAGGCACCAAATAGTATCTGCCCCCCCCCCCCATACGCCGCTCGT
TGCGACAAAGAGTTGACGTTTCGCACAAGGCGACTCACCTGGGCTGGCCCATTTGCAGTGCACGGGGTGGCATGCGTTAG
CGACGTGATAAAAAGAAGAAAAAAGAACGTGCGGGCACTGGGAATCGAACACACGACCTGAAAGTGGCGCAAGCTTGCGC
ACCATGCTAGCCACTATGTGAGGCAATTTTTAGAATTAGATTGGCATCGCGATACTTAAAGAACAAAACGACACCGGCAA
ATTTAAACCCCC-GCAACACAAATTCCCATAAACACAGCTCTGTGTGAGGGATTGAACCGAGGTCTTCTTTCTAGTG-AA
CACTGTTGCTAGCCACCATCATTACTTTGATTAGGTGTCTAAAATGGCAGCCCCATGTATATTAACTATAAGCCACAATC
GTGATTTTCTTTTTGAAAAAAGTAACTATTTTTTAAAACACAAAATATTTCTAATTCCTGAACATATTTATGAAAAATCA
AACTTTTCATGAAACCCAAACATTTTTTT--AAAGAA---ACCAATTTCAATGGAAGAACT-TTTTTTAAA-TTAAGACC
AAATTTTTAAAAAATTCTAACATTTTTTGAGAGAACTAGTACAAATTAATAATTTAC---TTA--TTTTTAAATCACAAA
CAAATTTATCAAGATGCAATTTCTTTATAA----------------------------
>chr4D_3139
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---------------------------------CTCACCTGGGCCGACCCATTTGCAGTGAACGGGGTGGCGCGCGTTAG
CAATGTGAAAAAAAGAAGAAAAAGGAGCGCGCGTGCAGTAGGGTTCGAACACGCGACCGCGAGGTGGG------TTGCGC
ACCGCGCTAGCCACTGTAACAGGTAAGTCATAGTTTCACATTGGCAGCGCGACTCCAAAAGAAGTAAACGACCGCGGCAA
ATTTAAACACCAGGCAACACAAATTCCCATAAACACAAATCTGTATGAGGGATCGAACCTAGCTCCTATTTCTAGTGCA-
CAGCGTTGCTGGCCACATTCATTACTTTGATTAGGTGTCTAAAATGGCAGCCCCATGTATATGAACTATAAGCCACAAAC
GTGATTTTCTTTTTGACAAAAGTAAATATTTTAAACG-GAAAT----TTTCTAATTTGTGAACAAATTTATAAAAAGTCC
AACATTTCGTGAAACCCAAACATTTTTTG--AAAAAATGAACAAATTTCGAAGGGACAACAATTTTTTTAA-TTACGAAC
AAACTTTTGAGAATGAA-AACATTTTTTCAAAAAACAAGAACAAAATTTAATAATGCACTTTT--TATTGAAATCACGAA
CAAATTTATCAAAATG------------------------------------------
>chr2A_3139
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---------------------------------CTCACCTGGGTCGGCCCATTTGCAGTGAATGGGGTGGCGCATGTTAG
CGACGTGAAAAAAAGACGAAAAGGGAGCGCGCGGGCAATAG--ATTGAACACGTGACCTCGAGGTGGG------TTGCGC
ACCGCGCTAGCCACTGTAACAGGCAAGTCATAGTGTCATATTGGCAGCGCGACTCCAAAAAAAGTAAACGACCGCGACAA
ATTTAAACACCAGGCAGCACAAATTCGCATAAACACAAATTTGTATGAGGGATCGAACCTAGGTCCTATTTCTAGTGCA-
CAGCGTCGCTGACCACATTCATTACTTTGATTAGGTGTCTAAAATGGCAGCCCCGTGTATATGAACTATAAGCCACAAAT
GTTATTTTCTTTTTGAC-AAAGTAA--ATTTTTTAAAAGAAAT----TTTCCAATTTGTGAACAAATTTATAAAAAGTCC
AACATTTTTTGAAACCCAAACATTTTTTG--AAAAAAGGAACAAATTTCGAAGGGAGAACAATTTTTTGAA-TTACGAAC
ACATTTTTGAGAATGAA-AATATTTTTTCAAAAAACAAGAACAAATTTTAATAATGTACTTTT--TATTGAAACCACGAA
CAAATTCATCAAAATGCGAACTTTTTATGAAATTCCCT--------------------
>SNPs
---------S----------------------------------------------------------------------
S----S----------------S--------------------S------------------------------------
------S---------------------------------S-------------S--S--------S----S-S------
---S-----------------------S--S--------S-----------S----------------------------
-------------------S-----S---------------------SSS-S---S-SSSS-------------------
-S-----------------------S--S-------------------------------------------SS-S----
-------S-----S---------------------------------------------SSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------S--S-
--S-----S--------SS------S----S----S-----------------S-----------S--------------
---------------S-------S--------------------------------------------------------
S-----------------SS----------------------------------S-------------------------
----------S------------SS---S----------S-----------------------------SS-----S---
------------------------------------------------------------------------S-------
--------S-----S-----------------------------------------------------------------
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----S--------------------------------S------------------------------------------
--------------------------------S-----------------------------------------------
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-SS-----------------------------SS----------------------------S-S---------------
------------------------S-----------------------S--------------------S----------
--------------------------------------------------------------------------------
------------------------------S--SSS-SS---------------------S----------S-----S--
-----S-----------------------SSSS-----S---------------S----S-S-----S------------
-----S---S-----------S--------------------------------S------------------------S
S----------S-------------------------S---------S--S-----S----------SS--------S--
-S----S-------------------------------------------------------------------------
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-------------------------------------------------------------------S------------
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--------------------S-----------------------------------------------------------
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-----------------------------S-----------------S--------------------------------
------------------------------S-----S-------------------------------------------
S-S------------------------SS------------S--------------------S-----------------
--------------------------------------------------------------------------------
------------S------------------------------S----------S-------------------------
S--------S--------------S-S---------------------S------S------------------------
-SSSS-S-S-SS--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------S--------------------------------
S------------------------------------------------------S----S----S---S----------
----------------S---------------------------------------------------------------
--------------------------------S------------S----------------------------------
--------------------------------------------------------------------------------
-------------------S--S---------------------------------S----------------------S
----------------------S------SS----------------------------------------S-------S
---SS----------SS-----------S---------S---------------S-S------SS----S----------
------------------S-----SS-S--SSSS-SSSSSSSSSSSSSSSSSSSSSSS
>forward_856
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------TTTCAATGCACCCGTCCTCT------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------
>reverse_1958
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------TGGGGTCCAGGGTTTGAAAT-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------
>forward_1191
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------GACACTGACCCGATGACGTC---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------
>reverse_3202
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-CCTATACGCCGCTCACCTG------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------
