>input_sequence_43545
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----------------------------------------ATGCAGGGCGGCGACGGA---GGGATGGAGGAGACACCGG
CGG---------------------CGGCCAAGAACCGCGGCGGCGGTGTTGGTGAGGGCGCCGCC------------GTG
GAGGTGCAGGAGGGGCCTCGGTTCCGGCGGGTGTGCGTGTTCTGCGGGAGCAGCTCCGGGAAGCGCAGCAGCTATCGCGA
CGCCGCCGTCGAGCTCGGCAAGGAGCTGGTACGTAAC-------CGATCTAGTTGATTACACACGTTTTTTGTACTATCA
TGT-----TTAGT-TAGTTAGTTAGGTAAGCATGTCGGGCACGCCTGTGTGGTG---GCAGGTTGCTCGTGGGATGGATC
TGGTGTACGGCGGGGGCAGCCTGGGGCTCATGGGGGAGGTGTCAGAGGCCGTCCACAAGGGCGGCGGCCACGTCATCGGG
TGAGTC-GATCCGTGCAT--A-----CG---CACCCTCTTGCATTATTGGACTCGTCGTCTGC-----------CTTTTC
TCTCT-------CTTATTCTACTCGAAGTGCTGTAGCCACCTTTCTGTCGACACTGAAGTTTCTCCAACTGGCCTAATTA
ACAGTATCAAAAATTTTAAAAAAATTAACAGTATCCATGTCCAAGTTGCTCACCGGCGGTCACGTTCTGC--TTTTCTTT
GATGTGCAGCATCATACCTACCACTCTCATGGGCAAGGAGGTACGTACGTTGGAGACGATCGAGATCGATCGATCGACAC
CATACCCCAACCACCGGACAGGAGGAGAC--------CATGCATGCAA---------------------TTGCGGCGTAG
CCGTAGCTTGTGCTA-------------------------ATGTAGTACT-GTACTAACAAACTAGTACTAATTCATG--
-CATGCAAAATGGA--------ACAGATCACCGGGGTGACGGTGGGGGAGGTGGTGGCGGTGTCGGGGATGCACGAGCGG
AAGGCGGCCATGGCGCGCAACGCCGACGCCTTCATCGCGCTGCCCGGCGGCTACGGCACCCTGGACGAGCTGCTCGAGGT
CATTGCCTGGGCGCAGCTCGGCATCCACACCAAGCCAGTTAAGCT---CATCAAATAACTGGCCTTAGCTGCTC------
--TAGTTACTTAGTTAGCTCTGCTAA-------------TGGCGG-------ATGGATGGGTGCAGGTGGGGCTGCTGAA
CGTGGATGGGTACTACGACTTCCTGCTGGCCT---TCATCGACAAGGCCGTGGACGACGGCTTCATCAGGCCATCCCAAC
GCCACATCTTCGTCAGCGCGCCCGACGCCAGGGACCTCGTCCGCAAGCTCGAGGTAC-------TGTAAAAACTG--TAA
TCACGCACCTTCCTTCGTCCTGCCACCTTCTTGCATG-----CATGCATGACTAGCTAGCTAGCTTGGTCCGTCCGGTCC
AT-----GCATCCACCCTCCAATCCAAAAAGAAAAAAGAACTTAACTTGTCCGG-----------G--TCTCCGTCGGCT
CCGTGTGCACGACGGCATCTGCGAGCTTCTTCCG----------GCCTACTACTAGC-----------------------
-------TACTTCTACTCTCTGA-----------------------------------------TTAGTCGCCCTAGCTA
GGTTGCTTGCTACGTGTC------GAGTTGATAGTTGAACTCTCTTTCTCCATCAGTTGG------GTGCTGATCAAAAG
TTGCCATGCATGATTGCTCAGTGTCAGTGTGTAT-GTACTCTGGCAGAGCTGGTCTTCGTTTGCTTAGGT----------
-----------------AGTAGTAGAAAAATCGTTTGAGTTAGCTAGTG--GGCGG----TCATAATTTTGATTCAGAAT
AGTTGATTA-----------------------------------------------------------------------
------------------------------ATCTTAATAGATTTTTTGATGTGATTAACTGATAATGTTC----GCGTGC
C-------GCGCTCAGGAGTACGTGGCGGTGGAGGAGGAGGACCCGGCGACGCCCAAGCTGCGGTGGGAGATCGAGCAGG
CCGGCTACAAGGCCACGCTCCAGGCAGGGATCGCCCGCTGA---------------------------------------
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>chr5A_1_TraesCS5A01G347400
TAATGGAATCCAAACTATATGAGAAGTACTTGCTGGTGTATTGCCTCACCTGGTGAGCTGGAGCCACCTGATTGATCAAG
CCCATTCCACCACATAGCAAAGCTTCTAG-AAACGATTTTGCGACCAAATTAACCGAGCCAAGGAAGGCCAGAACGGTTC
AATCATATGGGTTCCAAACGAACTCACATCCTCTGCATACAGAACTGCTACTACTACAAA--------------------
------GACCACAAAAGTAAATCCTCGCAAGTGACGTGACACAGTTTACAATTTCGTCCTCTTTTTATCTTCTGGATTTT
GACCAGGGAATTGAATTACTAAGATCAAATTAGGATATACTACTA-----------------------------------
---------------------------ATAACTCCAGTTGACAGGAATA-------------------------------
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--------------------------------------------GCATGGGCAGGGCACCATCCCATCTACACATCGAGC
AGTTCGAGCAGTTTCACAGATTAGTTAAGAACTGGATGGATGGACCAGAGTA------------CGCTGTAGATAACTAG
TCC---TACCACTTGGCTACACGCTATGCATGCCTGGACGGACGGCGAGTTGAACTATCAACGCGTATAGTCAAGTCACT
GGAGTAGGAGTACTGGTACGGGAGGCAGGCAGCTCAGCTAGGTCATAACAGCTACTCCTAGTAGCTGCGAGGAAGCAAAA
GCTAGCTACGACGTACCCTCCCTGATTGGACGGGCGGCCGGGGTAGCATTTTGGACCGA-------------CCG-GGGG
TCATGCATAGCATCGGTAC-----GTAC----CCCACGTATATACAC-----ATGCTGGTTCGATCGTTCAG--AGAGTT
AACTGCGGTAAAAGAAACACATGTGCTCC------AGTCCGTAGGGTACCATTCGTCACGAACTCCTGTTCCC----GCT
AGCTCCCACGCCATCATATATACCCATCCACCCGTCTGCCCTGCCGGCACCCGCCTTGAAGCTTCCTTGCTACAACAAGT
CGCCACCAGCAGTCCACAGTCCACGCGCGAGAGCGC--ACGGCAC--CACAACTGTTTACCTTCCTTTCCGCGGC-----
--------AGTCGGCAGCTAAAGCT----AGCCAGGAGGCATGCAGGGCGGCGACGGA---GGGATGGAGGAGACACCGG
CGG---------------------CGGCCAAGAACCGCGGCGGCGGTGTTGGTGAGGGCGCCGCC------------GTG
GAGGTGCAGGAGGGGCCTCGGTTCCGGCGGGTGTGCGTGTTCTGCGGGAGCAGCTCCGGGAAGCGCAGCAGCTATCGCGA
CGCCGCCGTCGAGCTCGGCAAGGAGCTGGTACGTAAC-------CGATCTAGTTGATTACACACGTTTTTTGTACTATCA
TGT-----TTAGT-TAGTTAGTTAGGTAAGCATGTCGGGCACGCCTGTGTGGTG---GCAGGTTGCTCGTGGGATGGATC
TGGTGTACGGCGGGGGCAGCCTGGGGCTCATGGGGGAGGTGTCAGAGGCCGTCCACAAGGGCGGCGGCCACGTCATCGGG
TGAGTC-GATCCGTGCAT--A-----CG---CACCCTCTTGCATTATTGGACTCGTCGTCTGC-----------CTTTTC
TCTCT-------CTTATTCTACTCGAAGTGCTGTAGCCACCTTTCTGTCGACACTGAAGTTTCTCCAACTGGCCTAATTA
ACAGTATCAAAAATTTTAAAAAAATTAACAGTATCCATGTCCAAGTTGCTCACCGGCGGTCACGTTCTGC--TTTTCTTT
GATGTGCAGCATCATACCTACCACTCTCATGGGCAAGGAGGTACGTACGTTGGAGACGATCGAGATCGATCGATCGACAC
CATACCCCAACCACCGGACAGGAGGAGAC--------CATGCATGCAA---------------------TTGCGGCGTAG
CCGTAGCTTGTGCTA-------------------------ATGTAGTACT-GTACTAACAAACTAGTACTAATTCATG--
-CATGCAAAATGGA--------ACAGATCACCGGGGTGACGGTGGGGGAGGTGGTGGCGGTGTCGGGGATGCACGAGCGG
AAGGCGGCCATGGCGCGCAACGCCGACGCCTTCATCGCGCTGCCCGGCGGCTACGGCACCCTGGACGAGCTGCTCGAGGT
CATTGCCTGGGCGCAGCTCGGCATCCACACCAAGCCAGTTAAGCT---CATCAAATAACTGGCCTTAGCTGCTC------
--TAGTTACTTAGTTAGCTCTGCTAA-------------TGGCGG-------ATGGATGGGTGCAGGTGGGGCTGCTGAA
CGTGGATGGGTACTACGACTTCCTGCTGGCCT---TCATCGACAAGGCCGTGGACGACGGCTTCATCAGGCCATCCCAAC
GCCACATCTTCGTCAGCGCGCCCGACGCCAGGGACCTCGTCCGCAAGCTCGAGGTAC-------TGTAAAAACTG--TAA
TCACGCACCTTCCTTCGTCCTGCCACCTTCTTGCATG-----CATGCATGACTAGCTAGCTAGCTTGGTCCGTCCGGTCC
AT-----GCATCCACCCTCCAATCCAAAAAGAAAAAAGAACTTAACTTGTCCGG-----------G--TCTCCGTCGGCT
CCGTGTGCACGACGGCATCTGCGAGCTTCTTCCG----------GCCTACTACTAGC-----------------------
-------TACTTCTACTCTCTGA-----------------------------------------TTAGTCGCCCTAGCTA
GGTTGCTTGCTACGTGTC------GAGTTGATAGTTGAACTCTCTTTCTCCATCAGTTGG------GTGCTGATCAAAAG
TTGCCATGCATGATTGCTCAGTGTCAGTGTGTAT-GTACTCTGGCAGAGCTGGTCTTCGTTTGCTTAGGT----------
-----------------AGTAGTAGAAAAATCGTTTGAGTTAGCTAGTG--GGCGG----TCATAATTTTGATTCAGAAT
AGTTGATTA-----------------------------------------------------------------------
------------------------------ATCTTAATAGATTTTTTGATGTGATTAACTGATAATGTTC----GCGTGC
C-------GCGCTCAGGAGTACGTGGCGGTGGAGGAGGAGGACCCGGCGACGCCCAAGCTGCGGTGGGAGATCGAGCAGG
CCGGCTACAAGGCCACGCTCCAGGCAGGGATCGCCCGCTGATCCATCGACGCTTGCTTAATTTATTAT-TACACTAGTCA
CC-------------------TACTACTACTGTATGGGACCAATTGGTTACTGGCCCGCGCCGCTAGTTGTTAGTTAATT
AGTTTATTAGTACCATCACACGTACTACGCCATGCATTCATGC------ATGTAGCACGGACGGAGGAACG----GGATA
TTCTATTCCTCTTTGGTGCATACAT--GCATGCATTCCCGCGTGTTAAACTTCCAACACGTTCCAGTTTGTGCCTGCTGC
TTACTT------------------------AGTCCTGTAGGCTGACGTACGGAAGTGTGTAACAGTGTTGCATCTATTTT
GATTATGT------GTAGGTGGCTGCAACAGTGGTGCGTATGGTTCATGGCATGATTAATCATACTTAAGTGTATTTTGT
CTAGATTATTTGTGCACACTACTGGAAATTAACTGCACGCTGACGGCTTGGCTCTTGGCCGAGGACCAAACAACGGGCGC
TGAGTTTAGTCCCCTTTACC-TAAGGACGAGCGGCAGGAACGGTTTAATAGTCAGATAGTTCAGAAGCAGTAAACTTCTA
TCTTCATTACATTTTTATTAAGAATATGGACTGTCACTATAAATCTTTACCTGTTCCGGGCAGAGAAGGTCCATGGTGAC
AGTCCATATTCCTAAAAATAATGACGGATGCTGACGCTTTTTATTAATCTGGTTAATTTTTAAAAACAATCATA---TGT
GTGAGAGCAATGGTCCAACCGTTTAAATCCACGGAAAATCATACGACGCTGGAAATCGCTCCCT-TAGGTTGCGATAAAT
GTTTGGGCGTGTTTCGAAGAAGCCTCACCCGAGGCTGCTTGTAAATTGCACCATCTCTGAGGTAGTATCTGGGTATTGAG
AGAAAACGTGTCCGGTTTGTGAAGGAAACGCGGGCCATGTTGCTCTATTGGACTTCAAACTTTTCATCCTCTCAAAGGAG
ACCATCACAAGACATGTGACATGCCACTGCATTATTCGGAACTGCCTACAATATTTGAGACATTTATT
>chr5B_1
TAAAGGAATCCAAAATTGATGTGAAATACTAGGTGGTGTATTGCCTCACCTGGTGAGCTGGAGCCACCTGATTGATCAAG
CCCATTCCACCACATAGCGAAGCCAATAGAAAACGATTTTGCGACCAAA----CCGAGCCAAGGAAGGCCAGAACGGTAA
AATCATATGGGGTCCGAACAAACTCACATACTTTGCATACATAACTGCTACTAGTACAAAGACTACAGCCCCTAAAAAAG
TAAAAAGACTACAAGAGTAAATCCTCGAAATTGACATGACACAGTCTATAATTTTGTCATCTTTTTATCTTCTGGATTTT
GACCAGGGAATTGAATTACTAAGATAAGATTAAGATATACTAATTATTCCAGTTTTTTTGTTTGCCAGATACTAATAACT
CTAGTTTCCTTTGTTTGCAAGATACAGATAACTCTAGTTGACAGGCCGTCTAGCTACTCAGATAAAATTAAGATATACTA
CCTCCGTCTTAGTTTATTGGTCCTCATTGTAATGCATGTCACAAAAAATAATATCATTAGAAACTATGTTCAGATGCGAA
TGCAATGATATAATTTTTGTTGACATGCATTAACATTTTGTTAGTTAAATATTTGATCAAAATTTGACACAACTTACAAA
GGGGACCAATAAACCAAGACGGAGGTAGTATATACTACTACCTCCATTCACTTTTGTAAAATCGTTTAGATATTTAAGAC
AACACTCAAAACAGTTTAATTTCAGCTGTCTAAAAGGTCTTATAAAAGTGAACAGGGGGAGTGGCTAAGATTGGTAGAAG
CGAGATTAAGATTGGCTAAGGTCAGGTCCTGAGAGGGTTGTCAGGCATACCCATGGCACCATCCATC------TACATA-
---TCGAGCAGTTTCACAGATTAGTTAGG-ACTGGATGGATGGATCAGAGTACGCATAGCTTTGCGCTGTAGATAACTAG
TCCCACTACCACTTGGCTACACGTTTTGCGTGCCTCGACGGACGGCGAGTTGAACTATCAATGCGTATATTCAAGTCACT
GGAGAGGTAC------TACGGGAGGCAGGCAGCTCAGCTAGGTCATAACAGCTA------GTAGCTGCGAGGAAGCAAAA
GCTAGCTACGACGTACCCTCCCTGATTGGACGGGCGGCCGGTCTAGCATTTTGGACCGTCCGCTCGGGGCCTCCGCTCGG
CCATGCGCAGCACTGGTATGTACTGTAC----CCCACGTATATACAC-----ATGCTCCATCGCGATGGATGACAGAGTT
AACTGCGGTAAAACAAACACGTGTACTCC------TGTTGGTAGTGTACCATTCATCACGAACTCCTGCTCCCTTG----
--------CGCCATGATATATACCCATCCACCCGTCTGCCCTGCCGGCACCCGCCTTGAAGCTTCCTTGTTAGAACAAGT
CGCCGCAGGCAGTCCACAGTCCACACGCGAGAGCGCGCACGGCACCACACAACTGTTCTCCTTCCTTGCCACACCCGGTA
CGTACGGCAATCGGCAGCTAAC-CT----AGCTAGGAGGCATGCAGGGCGGCGGTGGCTGCGGGATGGGGGAGACC----
--------GCGGCGGCGGCGGTGCCGGCCAAGAACCACAGCGGCGGTGTTGGTGAGGGCGCCGGC------------GTG
GAGGTGGAGGAGGGGCCTCGTTTCCGGCGGGTGTGCGTGTTCTGCGGGAGCAGCTCCGGGAAGCGCAGCAGCTACCGCGA
CGCCGCCGTCGAGCTCGCCAAGGAGCTGGTACGTTGC-------CGATCAAGTTAATTACACACGTTTTTTGTACTATCA
TGT---------T-TAGTTAGTTAGTTAAGCATGTCGAGCATGCGTGTGTGGTA---GCAGGTTGCTCGTGGGATGGATC
TGGTGTACGGCGGGGGCAGCCTGGGGCTCATGGGGGAGGTCTCAGAGGCCGTCCACAAGGGCGGCGGCCACGTCATCGGG
TGAGTC-GATCCGTGCATATA-----CG---CATCCTCTTGCATTATTGGACACATCGTCTGC-----------TTTTTT
TCTCT-------CTTATTCTACTCGAACTACTGTAGCCACCTTTCTGTGGACACTGAAGTTTCTCCAACTGGCCTAATTA
ACAGTATCCATGTCCAATT-----------------------AAGTTGCTCA-CGGCTGTCACGTTCTGC--TTTTCTTT
GATGTGCAGCGTCATACCTACCACTCTCATGGGCAAGGAGGTACGTACGAGATCACCGGG--------------------
--------------------------------------------------------------------------------
-----GCTTGTGCTA-------------------------ATGTACTGTACTAA--AACAAACTACTA---ATTGATACT
ACATGCAAAGTGGA--------ACAGATCACCGGGGAGACGGTGGGGGAGGTGGTGGCGGTGTCAGGGATGCACGAGCGG
AAGGCGGCCATGGCGCGCAACGCCGACGCCTTCATCGCACTGCCCGGCGGCTACGGCACCCTGGACGAGCTGCTCGAGGT
CATCACCTGGGCGCAGCTCGGCATCCACACCAAACCAGTTAAGTTATTCATCAGCTAACAGGTCCTGGCTGCTC------
--TAGTTAGC---------TTGCTGA-------------TGGCGGACGGGTCACGGATGGGTGCAGGTGGGGCTGCTGAA
CGTGGATGGGTACTACGACTTCCTGCTGGCCT---TCATCGACAAGGCGGTGGACGACGGCTTCATCCGACCATCCCAGC
GCCACATCTTCGTCAGCGCGCCCGACGCCAGGGACCTCGTCCACAAGCTCGAGGTAC-------TGTAAAAACTAACTGA
CCACGCACCTTCCTTCGTGCTGTCAACTTCTTGCATG-----AATGC------------CTAGCTTGGTCCGTCCGGTCC
ATTGCATGCATGCACCTCCCAATCCCCATCCCCAAAAGAAAACGAGCGCGACTTGTCTGGCCTGGG--TCTCCGTCGTCT
CCGTGTGCACGAGGGCATCTCCGAGCTTCTTCCCAGCTCCGGGCGCCTACTACTAGC-----------------------
-------TACTTCTACTCTCTTTTTGTTTGCGGGTAGAAAAAAAAAGCTACTTCTACTCTCTGTTTAGTCGTGCTAGCTT
TGCTAGCTCCACGTGTCGAGTTGAGACTTGAGAGTTCAACTATCTTTCTTCATCAGTTTAGTTCGCGTGCTGACCAAAAG
TTGCCATGCTTGC----------TCGGTGTGT-T-GTACTCTGGCAGGCCTGGTCTTCGTTTTGCTTAG-----------
---------------------GTAGAAAAATCGATTGAGTTAGCTAGTA--GGCATCCTTTCATAATTTTGATTCAGAAT
AGTTGATTG-----------------------------------------------------------------------
------------------------------ATCTTAATAGATTTTTTGATGTGATTAACTGATAATGATTGAGGCGTGCC
GCGTGCATGCGTGCAGGAGTACGCGGCGGTGGAGGAGGAGGACCCGGCGGCGCCCAAGCTGCGGTGGGAGATCGGGCAGG
TCGGCTACAACGCCACGCTCCACGCAGGGATCGCCCGCTGATGGATGGACGCTTGCT-----------------------
CC-------------------CACTACTACTGTACGGGACCAATTGGTTACTGGCCCACTCCGCTAGTGGTTAATTAATT
AATTTACTAGTACCATCACACGTACTACGCCATGCATTCATGGCCATGGATGTAGTACGGACGGGACGGAGGAACGGATA
TTCCACT----TTGGTGTGCATGCATAGCATGCATTCGCGCGTGTTAAGCTTCCAGCACGTTCCAGTTTGTGCCTGCTAA
TTACTAGTAGTCCTGTTGGCTGCTCAGTTGACTCCTGTTGACTCACGCACGGAAGTGTGTAATACTGCTGTATCTATTTT
GATGATGT------GTAGCTGGCTGGAACAGTGGTGTGTATGGTGCATGCCATAATTAATCATCGTCAAGTATATTTTGT
CTAGATTATTTG--------------------------------------------------------------------
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>chr5D_356
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--------------------------------------------GAATA-------------------------------
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--------------------------------------------GCAAGGGCATGGCACCATCCCATCTACAGTACATA-
---TCGAGCAGTTTCACAGATTAGTTAAGAACTGGATGGTTGGACCAGAGCACGCATAGCTTTGCG--GTAGATAACTAG
TAC---TA------------------------------------------------------------------------
---------------GTACGGGAGGCAGGCAGCTCAGCTAGGTCATAACAGCTA------GTAGCTGCGAGGAAGCTAAA
GCTAGCTACGACGTACCCTCCCTGATTGGACGGGCGGCCGGGCCAGCATTTTGGACCGA-------------CCGCGGGG
CCATGCATAGCATCGGTAT-----GTAC----CCCACGTATATACAC-----ATGCTCGTTCAGAGAGTT------AGTT
AACTGCGGTAAAAGAAACACACGTACTCC------AGTTGGTAGTGTGCCATTCATCACGAACTCCTGTTCCCTTGGGCT
AGCTCCCACGCCATGATATATACCCATCCACCCGTCTGCCCTGCCGGCACCCGCCTTGAAGCTTCCTTGCTAGAACAAGT
CGCCACCAGCAGTCCACAGTCCACGCGCGAGAGCGC--ACGGCAC--CACAACTCCTTTCCTTCCTTTCCGCGGCCGGTA
CGTACGGCAG--------------T----AGCCAGGAGGCATGCAGGGCGGCGGCGGA---GGGATGGAGGAGACACCGG
CGGCGGTGGCG---G---------CGGCCAAGAACCGCAGCGGCGGTGTTGGTGAGGGCGCCGCC------------GTG
GAGGTGCAGGAGGGGCCTCGGTTCCGGCGGGTGTGCGTGTTCTGCGGGAGCAGCTCCGGGAAGCGCAGCAGCTACCGCGA
CGCCGCCGTCGAGCTCGGCAAGGAGCTGGTACGTGCTCGCTTATCGCTCGAGTTAATTACACACGTTTTGTGCATGATGT
TCAGC-------T-TAGTTAGTTAGTTAAGCATGTCGGGCATGCGTGTGGTGTG---CCAGGTTGCTCGTCGGATGGATC
TGGTGTACGGCGGGGGCAGCCTGGGGCTCATGGGGGAGGTCTCGGAGGCCGTCCACAAGGCCGGCGGCCACGTCATCGGG
TGAGTC-CATCCGTGCGTGCATGCACCG---TATCCTCTTGCATTATTGTCGTCGACGACTCATCGCTTGCTTTCTTTTC
TCTTGTCCTCTTCATCTACTAGCACTACTACTGTAGATACCTTTCTGTCGACACTGAAGTTTCTCCAACTGGCCTAAG--
--AGTATCCATGTCCAA---------------------------GTTGCTCA-CGGCAGTCGCG-TTCTGCTTTCTCTTT
GATGTGCAGCGTCATACCTACCACTCTCATGGGCAAGGAGGTACGTACGACACGACA-------------CGATCGACAC
CATGCCCCCAACCACGGACAGGAGGAGACCATCCATGCATGCATGCAA---------------------TTGCGGAGTAG
CCGTAGCTTGTAGTAGTA-------------GTAGTAGTGATGTACTGTACGTACTAACAAACTACTA---ATTCATT--
-CATGCAAAATGGA--------ACAGATCACCGGGGTGACGGTGGGGGAGGTGGTGGCGGTGTCGGGGATGCACGAGCGG
AAGGCGGCCATGGCGCGCAACGCCGACGCCTTCATCGCGCTGCCCGGCGGCTACGGCACCCTGGACGAGCTGCTCGAGGT
CATCGCCTGGGCGCAGCTCGGCATCCACACCAAGCCAGTTAAGCTATTCCTTTG----CTGATCCTAGCTGCCG------
--TACTTAG----TTATTCGCTGGCTTTACTAATGGCGGTGGCGC-------ATGGATGGACGCAGGTGGGGCTGCTGAA
CGTGGATGGGTACTACGACTTCCTGCTGGCCT---TCATCGACAAGGCGGTGGACGACGGCTTCATCCGGCCATCCCAGC
GCCACATCTTCGTCAGCGCGCCCGACGCCAGGGACCTCGTCCGCAAGCTCGAGGTACGTACTACTGTAAAAACTGACTAA
TCACGCACCTTCCTTCGTCCTGTCACCTTCTTGCATGCGATGCATGCATGA----CTAGCTAGCTTGGTCCGTCCGGTCC
AT-----GCATGCACCCTCCAATCCAGAAAGAAAAAAGACCTTAACTTGTCCGG-----------GCCTCTCCGTCGGCT
CCGTGTGCACGACGGCATCTGCGAGCTTCTTCCG----------GCCTACTACTAGC-----------------------
-------TACTTCTACTCTCTGA-----------------------------------------TTAGTCGCCCTAGCTA
GGTTGCTTGCTACATGTC------GAGTTGAGAGTTGAACTCTCTTTCTCCATCAGTTGG------GTGCTGATCAAAAG
TTGCTATGATTGC----------TCAGTGTGTAT-GTACTCTGGCAGAGCTGATCTAGATACATCCATTTTTACGACAAG
TATTTCTGGATGGAGAGAGTAGTAGAAAAATGGGTTGAGTTAGCTAGTG--GGTATCCTTTCATAATTTGGATTCAGAAT
AGTTGATTC-----------------------------------------------------------------------
------------------------------ATCTTAATAGATTTTTTGATGTGATTAACTAATCATGCATGTTTGCGTGG
C-------GCGTGCAGGATTACGTGGCGGTGGAGGAGGAGAACCCGGCGACGCCCAAGCTGCGGTGGGAGATCGAGCAGG
TCGGCTACAAGGCCACGCTCCAGGCAGAGATCGCCCGCTGATCCATCGACGCTTGCTTAATTTATTATTTACACTAGTCA
CC-------------------TACTACTACTGTATGGGACGAATTGGTTACTGGCCCGCGCCGCTAGTGGTTAGTTAATT
AATTTATTAGTACCAACACACGTACTACGCCATGCATGCATGC------ATGTAGTACGGACGGAGGAACG----GGATA
TTCCACT----TTTGGTGCATACAT--GCATGCAACCCCGCGTGTTAAACTTCCAACACGTTCCAGTTTGTGCCTGCTGC
TTACTT------------------------AGTCCTGTAGGATGACGTACGGAAGTGTG--ACAGTGTTGTGTCTATTTT
GATTATTATGTGTAGTAGGTGGCTGGAACAGTGGTGCCTATGCTGCATGCCATAATTAATCATCCTTAAGTATATTTTGT
CTAGATTATTTGTGCACACTACTGGAAATTAACTGTACGCTGAGCGCTTGGCTCTTCGCCAAGAACCAAACCATGGGCGC
T-------------------------------------------------------------------------------
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>chr5B_498
GACGGATT------------------------------------------------------------------------
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--------------------------------------------GCGAGTTGAACTATCAATGCGTATATTCAAGCCACT
GGAG---TAC------TACGGGAGGCAGGCAGCTCAGCTAGGTCATAGCAGCTACT------------------------
-----------CGTACCCTCCCTGATTGGACGGGCGGCCGGGCTAGCATTTTGGACCGA-------------CCACGCGG
CCATGCATAGCACTGGTAT-----GGTATGTACCCGTGTATATACACCACACATGCTTGGTCGATCAGAATT-----GTT
AACTGTGGTAAAAGATACACTTGTACTCCTACTACAGTTGGTTCTGTACCATTCATCACCAACTCCTGTTCCCTTGCGCT
AGCTCCCATGCCATGATATATACCCATCGACCCGTCGGCTCTGCCGGCACCCGCCTTGATGCTTCCTTGCAACTTCAAGT
CGCCACCAGCAGTCCATAGTCTCCACACAAGAGCGA--ACGGCACCACACAACTGTTCTCCTTCCTCGCCACGCCCGGTA
CGTACGGCAGTCGGCAGCTAAC-CT----AGCTAGGAGGCATGCAGGGCGGCGGCGGCGGCGGGATGGAGGAGGCG----
--------GCGGCGG---------CGGCCAAGAACCGGAGCGGCGGTGTTGGTGAGCGCGCCGCC------------GTG
GAGGTGCTGGAGGGGCCTCGTTTCCGGCGGGTGTGTGTGTTCTGCGGGAGCAGCTCCGGGAAGCGCAGCAGCTACCGCGA
CGCCGCCGTCGAGCTGGGCAAGGAACTGGTACGTGTAACAGA--CGATCAAGCTAATTACACACGTTTTGTGTATGATGT
CTTGTTAGTTATAGTAGTTCGTTAGGTGAGTATGTTGGGCATGCGTTCGTGTGTGGTGCAGGTTGCTCGTCGGATGGATC
TGGTGTACGGAGGAGGCAGCCTGGGGCTCATGGGGGAGGTCTCGGAGGCCGTCCACAAGGCCGGCGGCCACGTCATCGGG
TGAGTC-GATCCGTGCATGCACCTACGTACATATCCTCTTGCATTATTAGTTGACGATCGATGGCCTCA-----------
TTTCT-------CTTCATCTACTAGTACTACTGTGGCCACCTTTCTGTAGACACTGAAGTTTCTCCAACTGGCCTAATTA
ACAGTATCCATGTCCAA---------------------------GTTGCTCA-CTGCAGTCATGTTTCTGCTTTCTCTTT
GATGTGCAGCGTCATACCTACCACTCTCATGGGCAAGGAGGTACGTACCA------------------------------
-ATACCCCAACCACAGGACAGGAGGAGAC--------CATGCATGCAA---------------------TAGCGGAGTGC
CCGAAGCTTCTTCTAGCTTGTAGAAGTACTAATT------------TACT-GTACTAATAAAG------TAATTGATG--
-CATGCCAAATGGA--------ACAGATCACCGGGGAGACGGTGGGGGAGGTGGTGGCGGTGTCGGGGATGCACGAGCGG
AAGGCGGCCATGGCGCGCAACGCCGACGCTTTCATCGCGCTGCCCGGCGGCTACGGCACCCTGGACGAGCTGCTCGAGGT
CATCGCATGGGCGCAGCTCGGCATCCACACCAAGCCAGTTAAGCT---CATCAAATAACCGGTCTTAGCTGCTC------
--TAGTTAC----TTAGCTCTGCTAA-------------TGGCGG-------AAT----TATGTAGGTGGGGCTGCTGAA
CGTGGATGGGTACTACGACTTCCTGCTGGCCT---TCATCGACAAGGCGGTGGACGACGGCTTCATCAGGCCATCCCAGC
GCCACATCTTCGTCAGCGCGCCCGACGCCAGGAGCCTCGTCCGCAAGCTCGAGGTAAA---------------TAACTAA
TCACGCACCTTCCTTCGTGCTGTCAGCTTCTTGAAC---------GCATGACTAGCTTCTTGAACATAGACACACACACT
ATG--------------------------------AAGTGCTTGACTTGTCG----------------------------
-----------------TCTGCGTGCTTCTTCCG----------GCCTACTAGCTTGCAAAAATGTCTTATTATAGGACG
GAGAGAGTACGTCTACTCTTTGA-----------------------------------------TTAGTCGTCCTAGCTC
GATCGCTACACGTATC---------AGTTGAGAGTTCAACTCTCTTTCTCCATCAGCTGT------GTAC--ACCAAAAG
TTGTCATGATTGC----------TAAGTGTGTATCGTACTCTGGCAGAGTTGATCTTCGTTTTGCTTAG-----------
---------------------GTACAA-AATAGGTTGAGTCAGTAGGCAGTGGCACCCGTCTCTAATTTTTGCTCAGATG
AGCTGATATTGTACCAGATTCTCTGATATGATTAATTAACTACTCCCTCCATCTCATAATGTAAAACGTTTTTTGAGATT
AGTTAGTAATGAATCTGAGGTCAAAGCCATATTGTACCAGATTCTCTGATATGATTAATTAACTAATTCAT---------
GCGTGCGTACGTGCAGGAGTACGTGGCGGTGGTGGAC---GACCCGGCGACGCCCAAGCTGCGGTGGGAGATCGAGCAGG
TCGGCTACAACGCCACGCTCCAGGCAGAAATCGCCCGCTGATGGATCGACACTTGCT-----------------------
CAATTACGCTACTTACCTTATTACTACTATTGTATGACACCAACTGATTACTGGC-----CCGCTAGTGGTTAACTAATT
AATTTGGTACGATCACACG------TACGCCATGCATTCCTGC------ATGTAGTACGAACGGAGAAACGG--------
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>chr5A_902
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CGCCACCAGCAGTCCACAGTCCACACGCGAGAGCGC--AAGGCACA--------------------------GCCGGGTA
CGTACGGCAGTCGGCAACCAAGTTAGCTAAGCTAGGAGGCATGCGGCGCGGCGGCGGA---GAGATGGAGGAGACA----
--------GCG---G---------CGGCCAAGAACCGCAGCGGCAGTGTTGGTGAGGGCGCCGTCGTGGAGTTGGAGGTG
GAGGTGGAGGAGGGGCCTCGGTTCCGGCGGGTGTGCGTGTTCTGCGGGAGCAGCTCCGGGAAGCGCAGCTGCTACCGCGA
CGCCGCCGTCGAGCTGGGCAAGGAGCTGGTACGTA-------ATCCCTCAAGTTAATTGCACACGTTTTGTGCATGATGT
TTAGTTAGTTAGT-TAGTAGTTA---TAAGCATGTCGGGCATGCGTGTGTGGTG---GCAGGTTGCTCGTGGGATGGATC
TGGTGTACGGCGGTGGCAGCCTGGGGCTCATGGGGGAGGTCTCAGAGGCCGTTCACAAGGCCGGCGGCCACGTCATCGGG
TGAGTC-GACA--------------------------CTTGCATTATTGTC----------GATCGCCTGGTTTCCTTTC
TCT---------------------------CTTTTGCTACCTTTCTGTCGAAACTGAGGTTTCTCCGACCGGCCTAATTA
ACAGTATCCATGTCCCACT-----------------------AAGTTGCTCA-CGGCAGTCGCGTTCTGC--TTTTCTTT
GATGTGCAGCGTCATACCCACCATTCTCATGGGCAAAGAGGTACGATCGACGTC-------------------TCGACAC
CCAACCACAACCACATG---GGACGATGC--------CATGCATGTTAATTACATAGTTTGCACTATCCTTGGGGAGTAG
CAGTAGCTTGTAGGACTACTTTAGTACAGCTCTA-------------------ATTAAGT--------------------
------AAAATGGACTGATGTTACAGATCACCGGGGAGACGGTGGGGGAGGTGGTGGCGGTGTCCGGGATGCACGAGCGG
AAAGCGGCCATGGCGCGCAACGCCGACGCCTTCATCGCGCTGCCCGGCGGCTACGGCACCCTGGACGAGCTGCTCGAGGT
CATCGCCTGGGCGCAGCTCGGCATCCACACCAAACCAGTTGAGCTATTCATCGACTAACTGGTCCTGGATGCTC------
--TAGTTACC---------CTGCTGA-------------TGGCGG-------ACGGATGGGTGCAGGTGGGGCTGCTGAA
CGTGGATGGGTACTACGACTTCCTGCTGGCCTTCATCATCGACAAGGCGGTGGACGACGGCTTCATCCGGCCATCCCAGC
GCCACATCTTCGTCAGCGCCCCCGACGCCAGGGACCTCGTCCACAAGCTCGAGGTACGTA--------------------
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>chr5B_994
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---------------------------------AGGAGTCATGCAGGGCGGCGGCGGA---GGGATGGAGGAGACA----
--------GCG---G---------CGGCCAAGAACCGCAGCGGCGGTGTTGGTGAGGGCGCCGTCGTGG------AGGTG
GAGGTGGAGGAGGGGCCTCGGTTCCGGCGGGTGTGCGTGTTCTGCGGGAGCAGCTCCGGGAAGCGCAGCAGCTACCGCGA
CGCCGCCGTCGAGCTGGGCAGGGAGCTGGTACGTA-------ATCGCTCGAGTTAATTGCACACGTTTTGTGCATGATGA
TTAGTTAGTTAGT-TTGTTTGTTA-TTAAGCATGTTGCACATG----CGTGTGGGCTGCAGGTTGCTCGTGGGATGGGTC
TGGTGTACGGCGGGGGCAGCCTGGGGCTCATGGGGGAGGTCTCCGAGTCCGTCCACAAGGCCGGCGGCCACGTCATCGGG
TGAGTCAGACA--------------------------CTTGCATTATTGTC----------CATCGCCTGGTTTCTTTTC
TCTCTTTCGCTTCATTTACTAATAGTAGTACTGTAGCCACCTTTCTGTGGACACTGAAGTTTCTCCGACTGGCCTAATTA
ACAGTATCCATGTCCAATT-----------------------AAGTTGCTCA-CGGCAATCGCGTTCTGC--TTTTCTTT
GATGTGCAGCGTCATACCCACCGCTCTCATGGGCAAGGAGGTACGATCGACGTC-------------------TGGACAC
CCGACCACAACCACAGGAACG-------------ATGCATGCATGTTAATTACATATTTTGCAGTATCCTTGGGGAGTAG
CAGTAGCTTGTACTAGTA-------------CTA-------------------ATTAAGTAAT------CCATGCATG--
-CATGCAAAATGGACTGATGTT--AGATCACCGGGGAGACGGTGGGGGAGGTGGTGGCGGTGTCGGGGATGCACGAGCGG
AAGGCGGCCATGGCGCGCAACGCCGACGCCTTCATCGCGCTGCCCGGCGGCTACGGCACCCTGGACGAGCTGCTGGAGGT
CATCACCTGGGCGCAGCTCGGCATCCACACCAAGCCAGTTAAGCT---CATGAAATCACTGGTTTTAGCTGCTGCAGTTA
CTTACTTAG----TTAGCTCTGCTAA-------------TGGCGG-------AAT----GGTGTAGGTGGGGCTGCTGAA
CGTGGAGGGGTACTACGACTTCCTGCTGGCCT---TCATCGACAAGGCGGTGGACGACGGCTTCATCCGGCCCGCCCACC
TTCACATCTTCGTCAGCGCGTCCGACGCCAGGGACCTCGTCCGCAAGCTCGAGGTACGTA--------------------
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>chr3D_3243
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------------------------------------------------------------------------------GC
TGAGTTTAGTCCCACCTCGCTTAAGGACGAGTAGTTCGGCAGGTTGAAATAGTT-ATAGTCCAGAAGCAGTCAGCTTTGG
TATTCATTATAGTCTCGTTAAGAATCCAGACTGTAACTATGAATCTTCACCTGTTCTGGGCAAAGAAGGTTCATAGTGAC
AGTCAATATTACTAACAATAGTGATGGATACCTGCGCTTTTTATTACTTCAATTAAATTTTCTTTGACTTTTTTGTCTGT
GTGAGAGCAATGATCCAACCGTTTAAATCCACGGAAAATCATACGATAATGGAAATCAGCCCTAGTAGGGTGTGGTAAAA
GTTTGGACGCGTTTCGAAGAGGCGTCACCTGAGGCCACTTGTAAACTGCATCATCTCT----------CTAGGTATCGAG
AGGGAACGTGTCGAGTTCGTAAAGGAAGTGTGAGTCATGTTGCTTTGTTGGCCTCGAAACTGCTCATGCTCTTAGTGGTG
GCCATCGAATGACATGTGCCAGGCCCCCGCATTTTTTGGACCCGCCTGTAATATTTCAGACATTTATT
>SNPs
---S----------S-SS---S---S----S-S-----------------------------------------------
------------------S----SSS-----------------------SSSS-------------------------SS
-----------S---S---S---------S--S--------S-----------S--------------------------
---------S----S------------S--S----S---------S--S-----S---S---------------------
-------------------------S-S----S---------S-S-----------------------------------
----------------------------------S---------------------------------------------
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-----------------------------------------------------S------------------SSS-SSSS
SSS-----------------------------------------------------------------------------
-----------------------S-S---S-----S-------------------------S-------S----------
----SS-S-SSSSSS-----------------------------------------SSSS--------------------
------------------------------------------S-------------------------------------
S-----------------S--------------------------------------S--------SS-SS---------
------------------------S-------------SS----S---------S-------------------------
--------------S-----------------------------------------------------------------
----------------------------------------------------------S---------------------
---------------------SS------------------------------S--------------------------
--------------------------------------S-----------------------------------------
--------------------------------------------------------------------------S-----
-----------------------------------S-------------S----S-------------------------
-----------------------------------------S--S-----------------------------------
----------------------------------------S---------------------------------------
---------------------------------S----------------------------------------------
-----------------------------S--------------------------------------------------
--------S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------S----S----------------------
----------S--------------------------------------SS-SSSS--SSSSSSSSSSSS----------
---------------------------------------------------------------------------S----
---------------------------------------------S-------------------S--S-----------
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---S----------------------------------------------------------S-----------------
---------SSSS-------------------------------------------------------------------
------------------------------------------------S-----------------------------S-
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----------------------S---------------------------------------------------------
-----------S--------------S-----------------------------------------------------
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-------------S-----------------S------------------------------------------------
---------S--SSSSSSSSSSS---------------------------------------SSS--S------------
---------------------------------S--------------------SS------------------------
--------S-----------------------------------------------------------------------
---------------------------------------------------------------------S----------
-----------SS-------------------------------------------------------------------
S-------------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
-S-----------------------------------------------------S------------------------
---S-S-SSSS---------------------------------------------------------------------
----------------------------------------------------------------------S---------
-------------------------S------------------S----S---S---------S-------S--------
-----------------------------------S-------SS-----------S---S--S-------S-S------
-------------SSS-SS------------SS-SSS-SSS----S--SSSSSSS-----S----------S-S---SSS
-S-------S-S-S-SS--------SSS------S-----S------S--------S-----S-------S---S-----
----S-----S----S----S---S----S-SSS------------S-SSSS----S----SSSSSSSS-SS-S------
------------S---------------------------------SSS--------SSS--SS-----S--S-S----S
------S--S----------S--S-----S-----SS--------S----S-------SSSSSSSSSS--S-----S---
--SS--------SS---S--S------SS-S-S-S---------S-S----S--SS-----SS----S----S-SS--S-
S-----SS-S--------S--S---S-S-----S--S---S-S----SS-------S-----------
>forward_1268
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------------------------------------------------ACACATGCTGGTTCGATCGT------------
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>reverse_2310
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---------------------------------------------------------------------TCGATCGACAC
CATACCCCA-----------------------------------------------------------------------
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>forward_1882
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----------------------TAGGTAAGCATGTCGGGCAC--------------------------------------
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>reverse_4335
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--------------TTTACCTAAGGACGAGCGGC----------------------------------------------
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--------------------------------------------------------------------
