>input_sequence_43530
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---------------------------------ATGGCTCGCTGTGTAGAAGTAGTGTACCATCTCATGCAGCAGACCCC
TCTACAGCTACAAGCACTTCTGCTACTGTCGCTCATCATACTACTACTGCGTCTGGCCACAACCGGCGGAGGCGGTAGCA
GCAAGCAAGCAAAGGCGAAGCGTCTCCCTCCTTCGCCTCCGGCCCTTCCCATCATAGGGCACCTGCACCTCGTCGGCGAT
CTCCCTCACGTCTCCCTCCGCAGCCTCTCCAGGACTCATGCCGCTGACGGCCTCATGCTCCTCCACCTCGGCTCCGTCCC
GAACCTCGTCGTGTCGTCCCCACGAGCCGCCCAGGCGGTCATGCGGACGAACGACCACCTCTTTGCGTCCCGCCCGCCGT
CCAGGATCGCCGACGCCCTCTTGTACGGCTGGTCGTCCGACATCGCCTTCTCCCCCTACGGCGAGCACTGGCGGCAGGCG
AGGAGGCTCGTCACCACGCACCTCTTCACAGTCAAAAAGGTCCAGTTGTTCCGCATCGCCCGTCAACAGGAGGTCAGCAT
CATCACCCTCTGAATCTGATCATGCATGTTTGTGAGAATGAAGAACATATATACGTAACCTGCTCTGCTCTTGCATGTAT
AGGTGAAAGTGGTGATCTCTAGGATCCGTGAGGCCGCGGCGGCGAGCGTGGCCGTGGACCTGGGCGAGGTGGTGAACACC
TACGCCAACGATGTGGTGTGCCGCGCTGTGTCGGGTAAGTTCTTCAGGGCGGAAGGCCGGAATAAAATGTTCAGAGAGCT
GATCGAGGAAAACTCAGCTCTCGTCGGAGGGTTTCATATGGAGGACTACTTCCCAAGGTTAGCCAAGGTACGTCTTCTCC
ATAGGTTCGTCCGCAACAACGTCGAGACGACACACAAGCGGTGGGACGAACTGCTAGAAGCGATAATAAGAGACCACGAG
AAAAACCCGATGCACCATGGCAGGGAGAACGGTGTCGACGAGCAAGGAGAGAGTGACTTCATCGACGTGTTGCTATCGGT
TCAGCAAGAGTTTCATGGCATCACCAGAGACCATATCAAGGCCATCTTAATGGTGAGCAAG-----TAAT---TAAATAT
AGAAAAATACGTTACACGC----ACCGGGTTATATTGCCTCACACAATTACCTCTGGTGAACAATGT--ACGTACGTACA
GGACCTGTTCGGAGCGGGCACGGACACATCGTCTCTGGTCCTAGAATTCGCCATGGCCGAGCTCATGCGCAAACCTGATC
AACTCATGGTCAAGCTGCAAGCTGAGGTGCGACGCGGCACTCCCGCCGGACAAGAATTTGTCGAGGAGCATAACCTGGCC
GGCATGACCTATCTGAAGGCTGTGGTGAAGGAGGCGCTCCGACTGCATCCGCCGGCGCCGCTCCTCCTCCCACACCTGGC
GATGGCGGACTGCGACCTCGACGGCTACAGCATACCTTCTGAGACTCGAGTCATCGTCAACGCATGGGCTATTGGCAGAG
ACCCCGGGTCCTGGGAGAAGCCGGACGACTTCGTGCCTGAGAGATTCCTCGAGGGTGGCACCGCGGCAGCGGTGGACTTG
ACGGGCAAAGACTTTCAGTTCGTGCCATTCGGGGCTGGCCGGAGAATATGCCCCGGTCTCAACTTCGGGTTGGCTACCGT
CGAGATCATGCTGGCGAACCTCGCATACTGCTTCGACTGGGAGCTGCCGGTCGGCATGGAGAGGGACGAG---ATCGATA
TGACGGAGGTGTTTGGTCTGACTGTGCGTAGAAAGGAGAAGCTCATGCTTGTCCCCAACACCCACGTGGTTGCGTGA---
--------------------------------------------------------------------------------
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----------------------------------------
>chr1B_1_TraesCS1B01G119900
GAAAAAGTTTGAAGGAAAAATATGACTTTTTGAAATGCCAAATATATCCATGATTTTTTAATATCCATGAATTATATTGG
ACTGTGTCAA-AAATATCAAAATAATATTATTTAGTTTTTTTGGTAGATCAATACCAAATATATACACGTATAAGAAATG
CAATCTCTAATCTTAGCACGGGACAGCATAGTATTGACTACAGGCATCCGACTCCATTAGAAATGCTTCTCCTTTCACAA
TTGGGCTTTTGGAGGACGAGCTCCATGGAGCCTGCTATTTTTAAAACTTCAAAATTCAAATTTTTAGGTTTCAAAATGAT
CTGGAAAAAATTATACACGTATATAAGGATGTTATGTATATGTGTGCGAAATTTCAAGACGAAGGAACTTGAATTGCAAG
CTGCGGAACAAAATCTTGGATTTTGAGAGTGAACAATACTTTTACATATTTCATCGTAAAATTTACACACATTATTAAAA
GTTA----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------AACCCTTGATTTTTAATATCCATGAATTAT
ATTGGACTGTGTCAAAAATATGTAAAAGTACGTAC---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------TATATGGGTATATGTGTATTTGTT
TTCAGAATTTTTTGAAACATAAAAGTATTTGTTCAATAGTCGGGCTCCATGAAGCCGGAGCTCCATTTAGCATCTTCGCG
CTGAGATGTGTCCACCCTCGAGTAATAGGAAGCGGCTCCCCTGACGGGCGGCTCCTGCCGTTGTGACGCTGCCATGTGGG
CCTGTTCCCCGATGGGTCCATCAGTCAGTGGTCGAACAGCACCCTGCCGAACGGCAGAGGATTCTCGTCCTGAGTAATAG
TACTAGTACTGAAGCGTGAAAAGGAAAGGTGCCACTGTGCAC--CACTAGTCTAGCACGGAACTGGAAGCCTTGCCCAGC
GGTGAAGATAAATTAACCACGTGCGGGAAAACTTCTCACGCAGCTATAAATAATAGTATGCATCCTCAGCTCTCTCCATA
CCACACA---CCAGTTGCACCCCAGCCTACCCCATGGCTCGCTGTGTAGAAGTAGTGTACCATCTCATGCAGCAGACCCC
TCTACAGCTACAAGCACTTCTGCTACTGTCGCTCATCATACTACTACTGCGTCTGGCCACAACCGGCGGAGGCGGTAGCA
GCAAGCAAGCAAAGGCGAAGCGTCTCCCTCCTTCGCCTCCGGCCCTTCCCATCATAGGGCACCTGCACCTCGTCGGCGAT
CTCCCTCACGTCTCCCTCCGCAGCCTCTCCAGGACTCATGCCGCTGACGGCCTCATGCTCCTCCACCTCGGCTCCGTCCC
GAACCTCGTCGTGTCGTCCCCACGAGCCGCCCAGGCGGTCATGCGGACGAACGACCACCTCTTTGCGTCCCGCCCGCCGT
CCAGGATCGCCGACGCCCTCTTGTACGGCTGGTCGTCCGACATCGCCTTCTCCCCCTACGGCGAGCACTGGCGGCAGGCG
AGGAGGCTCGTCACCACGCACCTCTTCACAGTCAAAAAGGTCCAGTTGTTCCGCATCGCCCGTCAACAGGAGGTCAGCAT
CATCACCCTCTGAATCTGATCATGCATGTTTGTGAGAATGAAGAACATATATACGTAACCTGCTCTGCTCTTGCATGTAT
AGGTGAAAGTGGTGATCTCTAGGATCCGTGAGGCCGCGGCGGCGAGCGTGGCCGTGGACCTGGGCGAGGTGGTGAACACC
TACGCCAACGATGTGGTGTGCCGCGCTGTGTCGGGTAAGTTCTTCAGGGCGGAAGGCCGGAATAAAATGTTCAGAGAGCT
GATCGAGGAAAACTCAGCTCTCGTCGGAGGGTTTCATATGGAGGACTACTTCCCAAGGTTAGCCAAGGTACGTCTTCTCC
ATAGGTTCGTCCGCAACAACGTCGAGACGACACACAAGCGGTGGGACGAACTGCTAGAAGCGATAATAAGAGACCACGAG
AAAAACCCGATGCACCATGGCAGGGAGAACGGTGTCGACGAGCAAGGAGAGAGTGACTTCATCGACGTGTTGCTATCGGT
TCAGCAAGAGTTTCATGGCATCACCAGAGACCATATCAAGGCCATCTTAATGGTGAGCAAG-----TAAT---TAAATAT
AGAAAAATACGTTACACGC----ACCGGGTTATATTGCCTCACACAATTACCTCTGGTGAACAATGT--ACGTACGTACA
GGACCTGTTCGGAGCGGGCACGGACACATCGTCTCTGGTCCTAGAATTCGCCATGGCCGAGCTCATGCGCAAACCTGATC
AACTCATGGTCAAGCTGCAAGCTGAGGTGCGACGCGGCACTCCCGCCGGACAAGAATTTGTCGAGGAGCATAACCTGGCC
GGCATGACCTATCTGAAGGCTGTGGTGAAGGAGGCGCTCCGACTGCATCCGCCGGCGCCGCTCCTCCTCCCACACCTGGC
GATGGCGGACTGCGACCTCGACGGCTACAGCATACCTTCTGAGACTCGAGTCATCGTCAACGCATGGGCTATTGGCAGAG
ACCCCGGGTCCTGGGAGAAGCCGGACGACTTCGTGCCTGAGAGATTCCTCGAGGGTGGCACCGCGGCAGCGGTGGACTTG
ACGGGCAAAGACTTTCAGTTCGTGCCATTCGGGGCTGGCCGGAGAATATGCCCCGGTCTCAACTTCGGGTTGGCTACCGT
CGAGATCATGCTGGCGAACCTCGCATACTGCTTCGACTGGGAGCTGCCGGTCGGCATGGAGAGGGACGAG---ATCGATA
TGACGGAGGTGTTTGGTCTGACTGTGCGTAGAAAGGAGAAGCTCATGCTTGTCCCCAACACCCACGTGGTTGCGTGATCG
GTACATAGTGCGTCCATATTTGTATACCGTTGCATATGTTTTTTTAGAACATAGTGTGTACAC---TGTGTAGGCGAGCC
AATCGTAGACTATGTGAATGAGCTATGTAATCTCGAGTTTGACTGGTTGTGGTTGTATTTTTTTTTCTTCTTCTTCACTG
TCTGAAACTCGGTGACTGGACCTTGATTTATGTTTGCTGTGTGCATCCTAATGCAGGATGAGGTAATCCTCTTTTCAAAG
AAAAACAAACTTTACCATTTTCATTCAGGTCCTTCTATGTCGCATCTAGATGTGAGATAATATTTCTCACATCTAAATAT
GATGTCAGTGTCATCTCATTTTTTTTTCACTGTTTGTCCTGTTTAATTGATTTTAATTTGTCAAAGCCCAAAGTCCGAAA
TTAAAAACCAGCTAGCCCCGCGTCCGCCAGGGTGGCTACCCGTACAAAAAAGAATCTGATCGCTAGCTTTCTTAGAAAAA
AGAACTGATTTTAATTTGTCAAAGCCCAAAGTCCGAAATTAAAAACCAGCTAACATCGATTTGTTAGCTTTTGTGCATGA
TCGTTATATACTCCCTCCGTCTGAAAATATTTGTCATAGAAATGGATAAAAATGGATACATCTAGAACAAAAATACGTCT
AGATACATCCATCTCTCCGACGAGTATTTCTGGATGGAGGGAGTATTTACAAATACGTCTCTTATCGCTAGCTTCTAGGT
TACCAACGATTTTTTTTTTGCCTTTTGGTTTTTGCATTTTTCACTCTCATATTTTATAATTAATTTTCAGTAAGGAACAA
AGTTTGATCTAAACATATTTTAAAAAAACATGTTCACGAGTTTACATATTTTGTCAAATTATAAAAATGTTAACAATACC
AAAAATGTTCTAATATATGGTGAATAATGTTTGATTATATGAAGATCATTTTCTGACTACACACTAATATTTTTGCAACT
ATACACTGAATACTTTTTTATATATAGTGAAATTTTTATA
>chr1D_40
AAATTACCT-----------------------------------------TGATTTTTTAATATCCTTGAATTGTATTGG
ACTATGTCAAAAAATATTAACATAATATTATTTAATATTTTTGGTAGATCAACACCAAATATATACACGTATAAGAAATA
CAATCTCTAATCTTAGCACAGGACGGCATAGTGTTGACTGCAGGCGTCCGATTCCATTAGAAATGCTTTTCCCTTCACAA
TAGGGCTTTTGGAGGACGAGCTCCATGGAGCCAGCTATTTTTAAAAATTCAAAATTCAAATATTTAAGTTTCAAAATGAT
CTGGAAAAAATTATACACGTATATAAGGATGTTATATATATGTGTGCAAAATTTCAAGACGAATGAACTTGAATTGCAAG
CTGCACAACAAAATCTTGGACTTTGAGAGTGAACAATACTTTTACATATTTCATCGTAAAATTTTCAAAAAAAAATA---
--------------------------------------------------------------------------------
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--------------AAACATAAAAGTATTTGTTCGAAAATCGGGCTCCATGAAGCCGGAGCTCCATTTAGCACCTTCGTG
CTGAGATGTGTCTGGCATCCTC----------------------------------------------------------
-----------------------------------------------------------------------GAGTAG---
---TAGTACTGAAGCGTGAAAAGGAAAGGTGCCAGTGTGCACACCACTAGTCTAGCACGGAACTGAAAGCCTCGCCCAGC
GGTGAAGATAAATTAACCACGTGTGGGAAAACTTCTCACGCAGCTATAAATAACAGCATGCATCCTCAGCTCTCTCCGTA
CCAG----------------CCCAGCCTACCCCATGGCTCGCTATGTAGAAGTAATGTACCATATCATGCACCAGACACC
TCTACAGCTACAAACACTTCTGCTACTATCGCTCATCATACTACTACTGCACCTGGCCACAAC---------------CA
GCAAGCAAGCAAAGGCGAAGCGTCTCCCTCCTTCGCCTCCGGCCCTTCCCATCATAGGGCACCTGCACCTCGTCGGCGAT
CTCCCTCACGTCTCCCTCCGCAGCCTCTCCAGGACTCATGCCGCTGACGGCCTCATGCTCCTCCACCTCGGCTCCGTCCC
CAACCTCGTCGTGTCGTCCCCACGAGCCGCCCAGGCGGTCATGCGGACGAACGACCACCTGTTCGCGTCCCGCCCGCCGT
CCAGGATCGCCGACGCCCTCCTGTACGGCTGGTCGTCCGACATCGCCTTCTCCCCCTACGGCGAGCACTGGCGACAGGCG
AGGAGGCTCGTCACCACGCACCTCTTCACAGTCAAAAAGGTCCAGTCGTTCCGCATCGCCCGTCAGCAAGAGGTCAGCAT
CATCACCTCCTGAACCTGATCATGTTCGTGAGA-ATAATGAAGAACGTATACACACAACCGGCTCTGCTCTTGCATGTAC
AGGTGAAAGTGGTGATCTCCAGGATCCGTGAGGCCGCGGCGGCGAGCGTGGCCGTCGACCTGGGCGAGGTGGTGAACACG
TACGCGAACGATGTGGTGTGCCGCGCTGTGTCGGGTAAGTTCTTCGGGGCGGAAGGCCGGAATAAGATGTTCAGAGAGCT
GATCGAAGCAAACTCGGCTCTCGTCGGAGGGTTTCATATGGAGGACTACTTCCCAAGGTTGGCCAAGGTACGTCTTCTCA
GTAGGTTCGTCCGCAACAACGCCGAGACGGCACACAAGAGGTGGGACGAACTGCTAGAAGCGATAATAAGAGACCACGAG
AAAAACCCGATGCACCATGGCAGGGAGAACGGTGTCGACGAGCAAGGAGAGAGTGACTTCATCGACGTATTGCTATCGGT
TCGGCAAGAGTTCCATGGCATCACCAGAGACCATATCAAGGCCATCTTAATGGTGAGCAAC-----TAATTAATAAATAT
AGAAAAATATGTTACATAGATCGACTGAGTTATGTTGCCTCAT----TTACCTCTGGTGGACAACGT------GCCTACA
GGACCTGTTCGGAGCGGGCACGGACACATCGTCTCTGGTCCTAGAATTCGCCATGGCCGAGCTCATGCGAAGACCTGATC
AACTCATGGCCAAGCTGCAAGCTGAGGTGCGACGCGGTACTCCCGCCGGACAACAATTTGTCGAGGAGCATAACCTGGCC
GGCATGACCTATCTGAAGGCCGTGGTGAAGGAGACGCTCAGGCTGCATCCACCCGCGCCGCTCCTTCTCCCACACCTGGC
GATGGCGGACTGCGACCTCGACGGCTACAGCATACCTTCTGAGACTCGAGTCATCATCAACGCATGGGCTATTGGCAGAG
ACCCCGGGTACTGGGACAAGCCGGACGACTTCGTGCCGGAGAGGTTCCTCGAGGGTGGCGCCGCGGCAGCGGTGGACTTG
ACGGGCAAGGACTTTCAGTTCGTGCCATTCGGGGCTGGCCGGAGAATATGCCCCGGTCTCAACTTCGGGCTGGCTACTGT
CGAGATCATGCTGGCGAACCTCGCATACTGCTTCGACTGGGAGCTGCCGGTCGGCATGGAGAGGGACGATAAAATCGATA
TGACGGAGGTGTTTGGTCTGACTGTCCGTAGGAAGGAGAAGCTCATGCTTGTCCCCAACACCCACGTGGTTGCTTGATCG
GTACATAGTGCGTCCATATTTGTATACCGCTGCATGCGT--TTTTTTTAAACAAGGCAAAACATAGTGTGTAGTCCAGCC
AATCGTAGATTATGTGGATGAGCTATGTAATCTCGAGTTTGACCGGTTGTGGTCGTGTTTTTTCTTCTA-----------
-CTGAAACTCGGTGACTGGAACTTGATTTATGTTT---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------
>chr1A_144
--------------------------------------------------------------------------------
----------------------------------------------------------------ACACGTATAAGAAATA
CAATCTCTAATCTTAGTACGGGACGGCATAGTATTGACTATAGGCGTCTGACTCCATTAGAAATGATTTTCCCTTCACAA
TAGGGCTTTTGGAGGACGAGCTCTATGGAGCCTGCTATTTTAGAAAATTCAAAATTCAAATTGTTAGGTTTTAAAATGAT
CTGGAAA-AAATATACACGTATATAAGGATGTTATGTATATCTGTGCAAAATTTCAAGACAAACCAACTTGAATTGCAAG
CTGGACAACAAAATCCTGGACTTTGAGAGTGAACAATACTTTTCCATATTTCATCGTAAAATTTACACACATGTATATTA
CATACTCTCTCCGTTCGGAAAAACTTGCCCCAAATTTGTTTCTCAAATGGATGTATCCAACACTAACTTGACGCTAGATA
CATCCATTTGAGGAACAAGCTTTTTCAGACGAGTAAATTGCAGGAAACCACTACTTTGAAGGATCGGTTTGTAGAAAACA
CTACGTTACATTTCTTTTGCAGAAAACACCGCGTCTTGTATAATCATTTTGCAAAAACCACTGATCGGCAGATCTTGCTC
TCTTAAACGTGTTTATGACAGATGGGGCTCATTTTCTGCTTACGTGGCATAACCGTTTAGCTTTAATACAAAAACGCCCC
CTAACTTTCGCCCCCTTCTCCCCACCCTCCAGCCACACCACAGCCTTTCCCCTCGCTCCCAACCCACCCTCTTCTGTCAT
CCGTAAGCGTGTACACTGGCTCGGCGCTGCCCCTTCTTCCCCGGGCCACCGCCATCGTGCCCCCAACCGGATCCGGTCAC
ATCGACCTCCATCGTCCCCGTAGGGCACCGGCCAGCTCGGCATGGTGAGCGCATGGCGTCGGGATGAAGAAGAACATGCA
AGGGTCAGTGCCAGAGCCCTACACCGGCAGGAAGGCCGCCATAGGGAGTCGTTGTTGCCGTTCCTCGACAAGGGCGTTGC
GACTGGGCCAGCCGGGGCAGCGACTGGAGCAGCAGGGAACGCCCTGGGGAAGAAGAGGGTGGGAGGACGAGGAAGACGAC
CTGGGAAGAAGAGCGCCAGTGGGGCGACGACCGGAGCAGCAAGGGAGGCCTGCCATTCTTGACGCTCTAGCTGCCGCCGG
TGCACTGTGATGACGTGTGCGTGCAGATAGAGGACGGCAGGCCGGCGGCACCCACCACGGCGTACTGCAGCAATGCGTGC
ATGAACCACGCCTCCAATCGCCCGATGTTCAGTCCTGCCCACCATAGAACGAGGCGTCGGTGAGGACCCCCGATCTAGAT
CCTCGTCGGGGATCTCTGCGCGCTCTGTGCCCAGGAGCTCGAGACGATCGATCACCTGCTCCTCCACTGCCCATTCTTCA
AGACCGTCTGGCACGAGATCCTTGCTTGGTGCCGTGCCCCGATCCCCCTCCCCCAGGACACTGAGATCTCCTTCCTGGAC
TGGTGGTCGGCCTCGGTCGCGGCTGCGCCTACCGCCATGCGCAAGGGGCTCTCCTCCCTGGTGCTTCTCTCCGCCTGGTC
CCTCTGGCGTCATCGCAACGCATGCATCTTCGACAATGCAAGCCCCTCCACCGTGCACAATTCCACCACGTCGGGGTGGA
GCAATTCCACCACGGAGGAGGGGCTTTGGTGAGGGACTGCCGGCCGGCCATGGTCAACACGAGGTCGAGGGCGGGTGGGA
GGCTAATTGCGTTTTTCATTTCTGATTTGGGGGTGTCTATGTAAAATTTGAGAGTCTAGTTTGTAATTTTAGATTTAAAA
CCGTCTGACACAAAAAGTTACGTCACGTAAGCAGAAAATGGGCCCTGTCTGTCATAAACACGCTTAACAGAGCCAGATCC
GCAGATCAGTGGCTTTTACAAAACGATTACACAAGACATGGTGTTTTCTGCAAAAGAAATGTAACGTAGTGTTTTCTGCA
AATCTAGACTTTAAAATGGTGGTTTTCTACAATTTACTCTTTTTGGACGGAGGGAGTATATGGATATACGTGTATTTGTT
TTCAGAATTTTTTGAAACATAAAAGTATTTGTTCAAAAATCGTGCTCCACGAAGCCGGAGCTCCATCTAGCATCTTCGTG
CTGAGACGTGTCTGGCACACTC----------------------------------------------------------
-----------------------------------------------------------------------GAGTAGTAG
TACTAGTACTGAAGCGTGAAAAGGAAAGGTGCCAGTGTGCG--CCACTAGTCTAGCACGGAACTGAAAGCCTCGCCCAGC
GATGAAGATA----AACCACGTGTGGGAAAACTTCTCACGCAGCTATAAATAACATCATGCATCCTCTGCTCTCTCCGTA
CCACACACACCCAGTTGCACCCCAGCCTACCCCATGGCTCCTTATATTGAAGTAGTTTACCATCTCATGCAGCAGACCCC
TCTACAGCTACAAGCACTACTGCTACTATCGGTCATCATACTACTACTGCGTCTGGCCACAGC---------------CA
GCAAGCAAGCAAAGGCGAAGCGTCTCCCTCCTTCGCCTCCGGCCCTTCCCATCATAGGCCACCTGCACCTCGTCGGCGAT
CTCCCTCACGTCTCCCTCCGCAGCCTCTCCAGGACTCATGCCGCCGACGGCCTCATGCTCCTCCACCTCGGCTCCGTCCC
GAACCTCGTCGTGTCGTCCCCACGAGCCGCCCAGGCGGTCATGCGGACGAACGACCACCTGTTCGCGTCCCGCCCGCCGT
CCAGGATCGCCGACGCCCTCCTGTACGGCTGGTCGTCCGACATCGCCTTCTCCCCCTACGGCGAGCACTAGCGGCAGGCG
AGGAGGTTCGTCACCACGCACCTGTTCACAGTCAAAAAGGTCCAGTCGTTCCGCATCGCCCGTCAAAAAGAGGTCAGCAT
CACCACCTCCTGAACCTGAGCATGTTCGTGAGA-AC---GAAGAACATATATACACAACCTGCTCTGCTCTTGAATGTAC
AGGTGAAAGTGGTGATCTCCAGGATCCGTGAGGCCGCGGCGGCGAGCGTGGCCGTCGACCTGGGCGAGGTGGTGAACACG
TACGCCAACGATGTGGTGTGCCGCGCTGTGTCGGGTAAGTTCTTCAGGGCGGAAGGCCGGAATAAGATGTTCAGAGAGCT
GATCGAGGCAAACTCGGCTCTCGTCGGAGGGTTTCATATGGAGGACTACTTCCCAAGGTTGGCCAAGGTACGTCTTCTCA
GTAGGTTCGTCCGCAACAACGCCGAGACGGCACACAAGAGGTGGGACGAACTGCTAGAAGCGATAATAAGAGACCACGAG
AAAAACCCAACGCACCATGGCAGGGAGAACGGTGTCGACGAGCAAGGAGAGAGTGACTTCATCGACGTGCTGCTATCGGT
TCAGCAAGAGTTTCATGGCATCACCAGAGACCATATCAAGGCCATCTTAATGGTAAGCAACTAATATAATTAATAAATAT
AGAAAAATATGTTACATAGATCGACTGAGTTATGTTGCCTCAT----TTACCTCTGGTGGACAACGTTAACGTGCCTACA
GGACCTGTTCGGAGCGGGCACGGACACGTCGTCTCTGGTCCTAGAATTCGCCATGGCCGAGCTCATGCGCACACCTGATC
AACTCATGGCCAAGCTTCAGGCTGAGGTGCGACACGGCACTCCCGCCGGACAAGAATTTGTCGAGGAGCATAACCTGGCC
GGCATGGGCTATCTGAAGGCCGTGGTGAAGGAGACGCTCAGGCTGCATCCGCCGGCGCCGCTCCTCCTCCCACACCTGGC
GATGGCGGACTGCGACGTCGACGGCTACAGCATACCCTCTGAGACTCGAGTCATCGTCAACGCATGGGCTATTGGCAGAG
ACCCCGGGTCCTGGGAGAAGCCGGACGACTTCGTGCCAGAGAGGTTCCTCGAGGGTGGCACCGCGGCAGCGGTGGACTTG
ACGGGCAAGGACTTTCAGTTTGTGCCATTCGGGGCTGGCCGGAGAATCTGCCCCGGTCTTAACTTCGGGTTGGCTACTGT
CGAGATCATGCTGGCGAACCTCGCGTACTGCTTCGACTGGGAGCTGCCGATCGGCATGGAGAGGGACGATG---TCGATA
TGACGGAGGTGTTTGGTCTGACTGTCCGTAGGAAGGAGAAGCTCATGCTTGTCCCCAACACCCACGTGCTTGCTTGATCG
GTACATAGTGTG-CCATATTTGTATACCGCTGCATATGTGCTTTTTTTAAACAAGGCAAAACATAGTGTGTAGGCACGCC
AATCGTAGATTGT-TGGATGAGCTACTTAATCTGGAGTTTGACCGGTTGTGGTCGTGTTTTTTTTT--TCTTCTTCGCTG
TCTAGAT-TCGGTTACTCGAACTTGATTTATGTTT---------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------
>SNPs
S--SS-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------S------S------
---S-------------S--S-------------S-S---------------S--------------------------S
------------------------S--------------------S----------------------S---S-------
-S--------------------------------------------S---------------------------------
-----------------------------------------------S---------------S----------------
----SS--------------S---------------------------------------------------S-S--SS-
SS------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------S--S-SS-------SSS-SSSSSSSS
S-SSSSS-SSSS-SSSSS-SSSS-SSSSSSS-SSS---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------S----S-----------
------------------------------------S-S---------------------------------------S-
------------SSS-S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S---
----------------------------------S------------------------------S------S-------
-----------------------S-----------------------------S--S--------------------S--
-------------------------------------------S------------------------------------
---------------------------S-----------------------------------SSSSSSSSSSSSSSS--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S--S----------------
--------------------S-----------------------------------------------------------
----------------------------------------------S---------------------S-----------
-------SS-----S---------SSS--SS-SS-S------------------SS-----------------------S
-------------------S-----------------------------------S-----------------------S
-----------------------------------------------------------------S--------------
--------S------S--------------------------------------------S------------------S
S--------------------S-------S--------S-----------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S-------------------
---------S------SSS------S-S-----S--------SSSSS------------S----S--------S-S----
-----------------------------------------------------------------------S--------
---------S----------------------------------------------------------------------
--------------------S------------S-----S-S--------------------------------------
--------------------------------------------------------------------------------
-------------------------------------S-----S------------------------------------
--------S--------------------------------------------------------------------S--
---------------------------------------------------------------------S----------
-------------------------S-----S-----------------------------------------S------
-----------------------------S---------SS----SSS-S-S-SS-SSS-SSS------------S----
---------S------S--------------------------S---------S--S-------------------S---
--------------------S--------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_2360
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------TCAGTCAGTGGTCGAACAGC----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------
>reverse_3756
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------GTACA
GGACCTGTTCGGAGC-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------
>forward_2944
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------GGACGAACGACCACCTCTTT----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------
>reverse_4462
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------ACTGTGTAGGCGAGCCAAT
C-------------------------------------------------------------------------------
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----------------------------------------
