>input_sequence_43518
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-------------------------------------------------------------------------------A
TGGGGAACTATCTGACGAGTAGAATAACGGCAGAGAAGCATGTCCATGTCA------AGACACTGAAGAATAGCAAGGGA
AGGCCTGACGTTAAATTTCATGACCTTCCAGAGGTATGTTAATTATGCCTTTCGACTTGACCCTCAGGGTAAATAGATTT
CTCTGCTTAAATTTGTCTTCTCCTTTTGCTGAAGGATGTACTGAGTGCAATT----------------------------
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-------------------------------------------------------------------------TTATCGA
AATTACCTGTGAAAGAGGCTGTTCGGACCAGTGTTTTGTCGACTGACTGGAGATGTACATGGACAGCTTGCCCCAGGCTA
AGCTTTGGTGTCAATGATGTATGTAAGAATGTGAAAATGAAACATCAGCACACCCAGATGTTCATCGACCGTGTTAATGC
GGTTTTGGGGAAGCACTGTGGCAGGGTTGTTGACCAACTTGAAATTAAATTTATATTCGAGAGCAAGCTTGTTGATCACC
TCAATAACTGGATTAGATTTGCTATGTCGACCCACGCAAAGAATCTAGCTTTTGATTTGGCGCCACCGTCCAATCTTCTG
AAATATGGGGATCATTACAGATTCCCATTTGAGC---TTTTAGACAACAAAAGTGTATCCTGTCTAGCGTGTCTTCAACT
TAGCTTTGTGTGTTTCAAACCACCTCCTG-CCGATTTCATAGGTTTCCCAAACCTAAGAAAGCTTGATCTCCATGCGCTG
AAGACCACTAGGCAGGATCTCGAGAGTATCTTGTGCAGTTGCATTACTCTTGAGTGGCTAAGCATAGTCAGATGCCATCT
CAAGGATGAAATGAAGGTGGTTCTGCAGCCATTATCCCAACTGCAGTACTTGAAAATCATGCACTGTGAGGTAACCAAGA
TAGAGTTCGATGCTGCAAATCTATCCACCTTTGTTTATGATGGACCATACATACCTATTACCCTCCATCATGCTACGAAA
CTGGAGAATGCAAAATTTTGGTTCCGCGGTGCGGTTTTTCAGCGTGCTGCCACGTCACTCCTCAATGGGCTACCAGATGT
ACAAAACCTGACATTGCAACTTGGAATGCAACGCCTAGAGGTAT-TTTAT-ATTGGGACAATATTCGAGTTATGGTTTAG
CATG------TAATCTTGCAATAACCTTTGCTGT------TTTATCTTTCAGAGCCGGTGGACATTAAATAGCCCTCGTG
TGTTTTCTCACCTCAGGCACGTGCAGATACTGTTGGTTATACATCATGAAGACAGTGACAAAATCCTCTACTTAGTTTCT
TTTCTAAGGGTTTCTCCGTTCATTGAGAAGTTGGAAGTACATGTGAGTAATATTCTCAATCATTT-CCCC---TTTTTGT
TTGTAAGCTACTCCCTCTGTAACTTAATATAAGACATTTTTTGACACTGCCATAGTGTCAAAAAACGTCTTATATTAAGT
TATGGAGGTAGTACTATTTTCAACCTGCATGTACGGGGTAGCAAGAAACCCTACTAATCTTGATGACTTAAACAGTTCCG
TGGCCTTTATACTATGTGGTTTGCAACCGATGGACCTTCGAGACAAGAAATACCGCCGTTGGAAGATAAATATGTGAATC
TGAAGGACATGCGTGTTACAGGATTCAAAGGGGCAAGAGGCCAAGCTGAATTCATCATGCACGTGGTTGAAAATGCTCCT
GCAATACAGGTCGTAACTGTAGACACAGCTCAAAGGCTAACCGATGCTTTGGATCCAGGGGAACCAACCCCTAGAGTAGA
TAGTGCTGCTCTTGATATGGTTAGAGGCCCTCTCCTGAAGAGGCTCCCACCGAATGCAAAACTTTCACTTATTTAA----
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>chr5B_1_TraesCS5B01G044900
ATACATAAAAAAGAAAACTCTCGGTTGGGAAGGTGGAGCCACGCCACGACCCTTTTATAAAAAGGCCGNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--------------------------------
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------------------------------------------------------------------------------AA
AATAAACCCATCTGGGGCTGCCGTCGCTTGTCGCCGCTCCGGCCTACCCTCCGCCTCAGTACTTTTGGTCGGAGGGTGGC
GTCAGAACCCCACCCTAATCCCCAAAGGAAATCAGATAGACCATAGGTTGCTCGTTCCAGATCTCTGCCTCTGCCGCGAG
TGGGGAATAAGAGGA----GCCGCCGCCGCCGGCCGGCACCTCCGCTCCGCAGGTTGCCTCTGTTCTCTAATCTAATCCT
ATTACTTTCCTCTTTCCCCCGCCGCGCTCCCACTTTTTTTTTTAGTTAGTTACGGGCGGCAGAGCTAAGTAAAGATGCAA
TTTTTATGATGCACACCAGACGACTTACTGATTC-TAGTTTCAGACAAAATTCAGTTTACGCAGACTTGCACTATTATGC
CAAGTCCTAATTAACC--CCATGCTCCCTAACCTCTTGTTTGTCCGATGTTCCTCAATCTTCTTT--TCAGCGCTTTGAA
TGGGGAACTATCTGACGAGTAGAATAACGGCAGAGAAGCATGTCCATGTCA------AGACACTGAAGAATAGCAAGGGA
AGGCCTGACGTTAAATTTCATGACCTTCCAGAGGTATGTTAATTATGCCTTTCGACTTGACCCTCAGGGTAAATAGATTT
CTCTGCTTAAATTTGTCTTCTCCTTTTGCTGAAGGATGTACTGAGTGCAATT----------------------------
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-------------------------------------------------------------------------TTATCGA
AATTACCTGTGAAAGAGGCTGTTCGGACCAGTGTTTTGTCGACTGACTGGAGATGTACATGGACAGCTTGCCCCAGGCTA
AGCTTTGGTGTCAATGATGTATGTAAGAATGTGAAAATGAAACATCAGCACACCCAGATGTTCATCGACCGTGTTAATGC
GGTTTTGGGGAAGCACTGTGGCAGGGTTGTTGACCAACTTGAAATTAAATTTATATTCGAGAGCAAGCTTGTTGATCACC
TCAATAACTGGATTAGATTTGCTATGTCGACCCACGCAAAGAATCTAGCTTTTGATTTGGCGCCACCGTCCAATCTTCTG
AAATATGGGGATCATTACAGATTCCCATTTGAGC---TTTTAGACAACAAAAGTGTATCCTGTCTAGCGTGTCTTCAACT
TAGCTTTGTGTGTTTCAAACCACCTCCTG-CCGATTTCATAGGTTTCCCAAACCTAAGAAAGCTTGATCTCCATGCGCTG
AAGACCACTAGGCAGGATCTCGAGAGTATCTTGTGCAGTTGCATTACTCTTGAGTGGCTAAGCATAGTCAGATGCCATCT
CAAGGATGAAATGAAGGTGGTTCTGCAGCCATTATCCCAACTGCAGTACTTGAAAATCATGCACTGTGAGGTAACCAAGA
TAGAGTTCGATGCTGCAAATCTATCCACCTTTGTTTATGATGGACCATACATACCTATTACCCTCCATCATGCTACGAAA
CTGGAGAATGCAAAATTTTGGTTCCGCGGTGCGGTTTTTCAGCGTGCTGCCACGTCACTCCTCAATGGGCTACCAGATGT
ACAAAACCTGACATTGCAACTTGGAATGCAACGCCTAGAGGTAT-TTTAT-ATTGGGACAATATTCGAGTTATGGTTTAG
CATG------TAATCTTGCAATAACCTTTGCTGT------TTTATCTTTCAGAGCCGGTGGACATTAAATAGCCCTCGTG
TGTTTTCTCACCTCAGGCACGTGCAGATACTGTTGGTTATACATCATGAAGACAGTGACAAAATCCTCTACTTAGTTTCT
TTTCTAAGGGTTTCTCCGTTCATTGAGAAGTTGGAAGTACATGTGAGTAATATTCTCAATCATTT-CCCC---TTTTTGT
TTGTAAGCTACTCCCTCTGTAACTTAATATAAGACATTTTTTGACACTGCCATAGTGTCAAAAAACGTCTTATATTAAGT
TATGGAGGTAGTACTATTTTCAACCTGCATGTACGGGGTAGCAAGAAACCCTACTAATCTTGATGACTTAAACAGTTCCG
TGGCCTTTATACTATGTGGTTTGCAACCGATGGACCTTCGAGACAAGAAATACCGCCGTTGGAAGATAAATATGTGAATC
TGAAGGACATGCGTGTTACAGGATTCAAAGGGGCAAGAGGCCAAGCTGAATTCATCATGCACGTGGTTGAAAATGCTCCT
GCAATACAGGTCGTAACTGTAGACACAGCTCAAAGGCTAACCGATGCTTTGGATCCAGGGGAACCAACCCCTAGAGTAGA
TAGTGCTGCTCTTGATATGGTTAGAGGCCCTCTCCTGAAGAGGCTCCCACCGAATGCAAAACTTTCACTTATTTAAGGCA
GACTTCCATTTGTTGTATATACTAGAGGCTGGGGTGCGCCTTGCAGACATATACATCTACATTCATGATGAGTCACTTAT
TTTGGGACGGAGGGAGTACTACATGAGTTAATTTATTAGTATTAGTCTGACATCTCTCAGACATCAATTGATGATTTATT
GTCCAGCAGCACATACGTAGGAGGCCATGGGGCTTGTCTGTATAGCTTAATAGTGTGAGGAGCAAACAGATTTGTAGATA
CGTATATACTTCCTCTG-TTCTAAATAGGAGTATAAGTCTGTTTAGAGATTTCAATATGGACTACACACGGAGTAAAATA
AATGAATCTACACTCTAAAATATGACTATATACATCCGTATGTAGTCTATATTGAAATCTCTAAAAAGAATTATATTTAG
AAATGGAGGGATTAGATTGTAAAGAGGCATGGTTCGGCAGCACATGTTCATTACTCGTTTAACATGCACACACGTATACA
TGCTGCAGCTAGCTGCACTCCACTTCACACACTGAGGAGCAGCGACTGATGCCTAGTGATGGGCTGAACCTGAAAGGCAA
GATACCTAGCATGCACATGAAAAGTGAGAACTGGCGTACACAACCAAAAGGTAACAATAATTTCTACACGCATAATGTTC
ATACCTCAGCTTAACTCTCCATGCTTGTTGATCTCGTCCTCTCACTGACCCACCATTTCACTGAACCACAAATTACCATT
TTGCGAAGTACTCCCTTCGTTTTTAAATATAAGCCCTTTTAGAGATTTTAATATGAACTACATATGAATGTATATAGATT
TTTTTCAATTTATTTTCAATGTCTTTTGGGAAATGAATACTTCAAACCAACTATTTTTATGTGTCAACTCTTCACACCAC
AAAAGTAGAAAAAACTCATTATAAAGTTCAAGGGTGGTCAAGTTATTGCAATTTTTGGCCATGATCGATTCATGCAAAAG
TATGCATTGGAAATTAAGATGACCAACCACAAGTAAT
>chr5D_7
AAAAAAGG----GAAAACTCTCGGTTGGGAAGGTGGAGCCACGCCACGACCCTTTTATAAAAGGCCGACACTGCCGTGAC
AGGCCTTTTTACAGCCGGGCCAGGTGGCAGAACAGCAACTAGTTAACGAGCGCTCCTTCGGGAGCCTTGCAACGATCGGC
GTCACTTGGCGCGCTCTCAGCCATTCGTCACGTGTCGCGCTCTGGACGCTCCCTTCAGATTTTGTTTTTTTATTTTTCCG
CACGCGTTTTCGGCTTTTTAAACGGTTTTTTTCCGGGTTTTTTCGACGTTTTGGTTTTTTCCCGGTCTTCCTTAGCTTTT
CAACCAAAAAACAATTTTCGAAAAAAATTACACGAAAAACATGTTTTCTTTTTTTCTTTCGTGAAAAGTCATGGTTTTTC
TTCCGCGAGAGGCACGGTTGTGCTTTCGCGAGAGTCACGGCCGTGCCTCTCGGAAAGGGAAAACAAAACGCGTTTTTTCT
TTTTTTTCTTTCGCGAGAGTCACGGTTTTGCTTCCGCGAGAAGCACGGTTGTGCTTTCGCGAGAGTCACAGCCGTGCCTC
TCGGAAAGGGAAAAAATACGCGTTTTCTGTTTTTTTTCTTTCGCGAGAGTCATGGTTTTGCTGTCGCCAGAGGTATGGTT
GTGCTTTCGCGAGAGTCACGGGCGTGCCTCTTTCGGAAAGGGAAAAAAACGTGTTTTCTGTTTTTTTCCTTCCACAAGAG
TCACGGTTTTACTTCCACGAGAGGCACGGCTGTGATTTCGCGAGAGGTACGGACGTGCCTCTTTCAGAAAGGAAAAAAAA
CCATGCTCCCGGTTGGTTTTTTCGTTCGGTTTTTTTCGTCTGATTTTTTTAATGAAAAAAAGTTCGTCAAAACCTATTAA
CATGGGATCTAGTTTTGAAGATCTCGACGCGAGGAATCCAATGGTGAAAACGGTTTGAGATTTGGACGCACGATTTAAGA
GATAAAACGTTTTGAATAAACGGATCTACGAAAAAAGGAAAAACTCCCAGGTTGCGACAAGTGGCGCGCTGCATGGGCGC
CACTTATCGTGACCCGGGAAGGTGGAGTGTTCTTTGCAACGAGTACTCCTTAATTAGTGATTTCGCCTGTTCTGGGCCTG
GCGCCTGCTGCACACACAAAAGCGCTGGGAGGGTATTTCTCAAAAAAGAAAAAAAGCGCTAGGAGGGTGAATCTAAAAAA
GAAAAAAAGCGCTGGGAGGGGAAGCAGAGACCCCTCCGGTGTTTCTTCTCCGTTCCTGAGTTTGGACCTTATTACACCAA
AATAAACCCATCTCGGGCTGCCGTCGCTTGTCGCCGCTCCGGCCTACCCTCCGCCTCAGTACTTTTGGTCGGAGGGTGGC
GTCAGAACCCCACCCTAATCCCCAAAGGAAATCAGATAGACCATAGGTTGCTCGTCCCAGATCTCTGCCTCTGCCGCGAG
TGGGGAATAAGAGGA----GCCGCCGCCGCCGGCCGGCACCTCCGCTCCGCAGGTTGCCTCTGTTCTCTAATCTAATCCT
ATTATTTCCCTCTTTCCCCCGCCGCGCTCCCACTTTTTCTTTA----AGTTACGGGCTGCAGAGCTAAGTAAAGATCCAA
TTTTTGTGATGCACACCAGATGACTTACTGATTC-TGGTTTCAGACAAAATTCAGTTTACGCAGACTTGCATTATTATGT
CAAATCCTTATTAACC--CCATGCTCCCTAACCTCTTGTTTGTCTGATGTTCCTCAATCTTCTTT--ACAGCGCT-TGAA
TGGGGAACTATCTGACGAGTAGAATAACGGCAGAGAAGCATGTCCATGTCA------AGACACTGAAGAATAGCAAGGGA
AGGCCTGACGTTAAATTTCATGACCTTCCAGAGGTATGTTAATTATGCCTTTCGACTTGACCCTCAGGGTAATTAGATTT
CTATACTTAAATTTGTCTTCTCCTTTTGCTGAAGGATGTACTGTGTGCAATT----------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------TTATCGA
AATTACCTGTGAAAGAGGCTGTTCGGACCAGTGTTTTGTCGACTGACTGGAGATGTACATGGACAGCTTGCCCCAGGCTA
AGCTTCGGTGTCAATGATGTATGTAAGAATGTGAAAATGAAACATCAGCACACCCAGATGTTCATTGACCGTGTTAATGC
GGTTTTGGGGAAGCACTGTGGCAGGGTTGTTGACCAACTTGAAATTAAATTTATATTCGAGAGCAAGCTTGTTGATCACC
TCAATAACTGGATTAGATTTGCTATGTCGACCCACGCAAAGAATCTAGCTTTTGATTTGGCGCCACCGTCCAATCTTCTG
AAATATGGGGATCATTACAGATTCCCATTTGAGC---TTTTAGACAACAAAAGTATATCCTGTCTAGCGTGTCTTCAACT
TAGCTTTGTGTGTTTCAAACCACCTCCTG-CCGATTTCATAGGTTTCCCAAACCTAAGAAAGCTTGATCTCCATGTGGTG
AAGACCACTAGGCAGGATCTCGAGAGTATCTTGTGCAGTTGCATTACTCTTGAGTGGCTAAGCATAGTCAGATGCCATCT
CAAGGATGAAATGAAGGTGGTTCTGCAGCCATTGTCCCAACTGCAGTACTTGAAAATCATGCACTGTGAGGTAACCAAGA
TAGAGTTCGATGCTGCAAATCTATCCACCTTTGTTTATGATGGACCATACATACCTATTACCCTCCATCATGCTACGAAA
CTGGAGAATGCAAAATTTTGGTTCCGCGGTGCGGTTTTTCAGCGTGCTGCCACGTCACTCCTCAATGGGCTACCAGATGT
ACAAAACCTGACATTGCAACTTGGAATGCAACGCCTAGAGGTAT-TTTAT-ATTGGGACAATATTCGAGTTATGGTTTAG
CATG------TAATCTTGCAATAACCTTTGCTGT------TTTATCTTTCAGAGCCGGTGGACATTAAATAGCCCTCGTG
TGTTTTCTCACCTCAGGCATGTGCAGATACTGTTGGTTATACATCATGAAGACAGTGACAAAATCCTCTACTTAGTTTCT
TTTCTAAGGGTTTCTCCGTTCATTGAGAAGTTGGAAGTACATGTGAGTAATATTCTCAATCATTT-CCCC---TTTTTGT
TTGTAAGCTACTCCCTCTGTAACTTAATATAAGACATTTTTTGACACTGCCATAGTGTCAAAAAACGTCTTATATCAAGT
TACAGAGGTAGTACTATTTTCAACCTGCATGTACGGGGTAGCAAGAAACCCTACTAATCTTGATGACTTAAACAGTTCCG
TGGCCTTTATACTATGTGGTTTGCAACCGATGGACCTTCGAGACAAGAAATACCGCTGTTGGAAGATAAATATGTGAATC
TGAAGGACATGCATGTTACAGGATTCAAAGGGGCAAGAGGCCAAGCTGAATTCATCATGCACGTGGTTGAAAATGCTCCT
GCAATACAGGTCGTAACTGTAGACACAGCTCAAAGGCTAACCGATGCTTTGGATCCAGGGGAACCAACCCCTAGAGTAGA
TAGTGCTGCTCTTGATATGGTTAGAGGCCCTCTCCTGAAGAGGCTCCCACCGAATGCAAAACTTTCACTTATTTAAGGCA
GACTTCCATTTGTTGTATATACTAGAGGCTGGGGTGCGCCTTGCAGA-----ACATCTACATTCATGATGAGTCACTTAT
TTTGGGACGGAGGGAGTACTACATAAGTTAATTTATT---ATTAGTCTGACATCTCTCAGACATCAATTGATGATTTATT
GTCCAGCAGCACATTCGTAGGAGGCCATGGGGCTTGTCTGTATAGCTTAATAGTGTGAGGAGCAAACAGATTTGTAGATA
CGTATATACTTCCTCTGTTTCTAAATAGGAGTATAAGTC--------GATTTCAATATGGATTACACACGGAGTAAAATA
AGTGAATCTACACTCTAAAATATGACTATATACATCCGTATGTAGTCTATATTGAAATCTCTAAAAAGAATTATATTTAG
AAATGGAGGGATTAGATTGTAAAGAGGCATGGTTCGGCAGCACATGTTCATTACTCGTT---------------------
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>chr5A_624
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-------------CCTAATCCTCAAAGGAAACCAATATCGTG---GGTTGCTCCCCCCAGATCTCTGCCTCCGCGGCGAG
TGGGGAATAAGAGGA----GCCGCCGCCGCCGGCCGGCACCTCCGCTCCGCAGGTTGCCTCTGCTCTCTAATCCTAT--T
ATTACTTTCCTCTTTGCCCC----------CACTTCTTTT-----TTAGTTACGGGCGGCGGAG------AAAGATGCGA
TTTTTCTGATGCACGCGACACTACTTACTGATTCTTAGTTTCAGACAAAATTCAGTTTACGCATACTTACATTATTATCT
CAAGTCCCTATTAACC--CTCTTGACTCTTG--------TTCCCCAACGTTCCTCAATGTTCTTT--TCAGCACT-GGAA
TGGGGAACTATCTGACGAGTAGAATAACGGCAGAGAAGCATGCCCATGTCAAGCAG---ACATCCAAGAATCGCAATGGG
AGGCCTGGCCTTAAATTTCATGACCTTCCAGAGGTATGTTGATTTTGCCTTTCAACTTGTCCGTCAGGGTAAATAGATTT
CTCTACTTAAACTTGTCTTCTCCTTTTGCTCAAGGATGTACTGTGCACAATTTTATCGAACAGTTTTGCTAGAACTCATC
TAGATGAGATTTAATTTGGTCTCATTCACCTTTTATAGCCATTGGATGTGGTGCTATAAGATGCGTGTGTGCTGACGTGG
GTTGTATCTGTTCTTGTTTTCCAGGTGAATGAGACCAAATTACGTCTCATCTAGATGAGTTCTAGGTACTCCCTTATCGA
AATTACCTGCAAAAGAGGCTGTTCGGACCAGTGTTTTGTCGACTGACTGGAGATGTACATGGACAGCTTGCCCCAGACTA
AGCTTTGGTGTCGATGATGTAAGTAAGAATGCGAAAAGGAAACACCAGCACACCCAGATGTTTATCGACCGTGTTAATGC
GGTTTTGACCAAGCACAGCGGCAGGGCTCTTGACCAACTTGAGATTAAATTTATATTCGAGGCCAAGCTTGTTGATCACC
TCAATAATTGGATTAGATTTGCTATGTCAGCCCACACAAAGAGTCTAGCTTTTGATTTGGCGCCACCGGACAATTTTCCC
AAATATGGGGATCATTACAGATTCCCATTTGAACAATTTACAGACAAGAAAAGTGTATCCTGTCTAGCGTGTCTTCAACT
CAGCTTTGTATGTTTCGAACCACCTCCTG-CCAATTTCATAGGTTTCCCAAACCTAAGAAAGCTTCATCTCCATGTACTC
AAGACCACTAGGCAGGATCTTGAGAGTATCTTGTGCAGTTGTGTTAATCTTGAATGGCTGAGCTTACTCAGATGCCATCT
CAAGGATCAAATGAAGGTGGTTCGGCGGCCATTGTCCCACCTGCACTACTTGAAAGTCGTGCACTGTGATATAACCAAGA
TAGAGTTCAATGCTCCAATGCTCTCCACCTTTGTTTATGATGGACCATACATACCTATTACCCTCCATCATGCTGCGAAG
CTGGAAAATGCAACAATTAGGTTCCTCGGCGCAGTTTTTCAGCATTGTATCGCGTCACTCCTCAATGGGCTACCAGATGT
ACACAACCTGACACTGCATCTTGGAATGCAAGAGCTTGAGGTAT-TTTATTACCGGGACAATTTTATAGTTATGGCAGT-
CACG------TAATCTTGCAATAACCTTTGTTGT------TTTATCTTTCAGGCCCGGTGGATGTTAAATAGCCCTCGTG
TGTTTTCTCACCTTAGGCATGTGCAAATACTGTTGATTATACATTATGAAGAATATGACAAAATCCTCTACTTAGTTTCT
TTTTGAAGGGTTGCTCCGTTCATTGAAAAGTTGGAAGTACATGTGAGTAATGCTCTCAATAGTTTTCCCC---CCTTTGT
CAG-----------------------------------------------------------------------------
----------CCATTATTTTCAGTTTGCATGTAGGTGGTAGCAAGAAATCCTACTAATCTTGATGACTTTTGCAGTTTCA
TGATATTGGCACTTTGCGGTTTGCATCCGATGGACCTTTGAGACAAGAAATGCCACCGTGTGAAGATAAATTTGTTAATC
TGAAGGACGTTCGAGCTACAGGATTCAGAGGGGCACGCGGCCAAGCTGAATTCCTTATGCACGTGGTTGAAAATGCTCCT
GCAATAGAGGTCGTGACTGTAGATACAGCTCAAAGGCTAACTGATGCTTGGGATCCAGATGAACCAATTCCTAGACTAGA
TAGTGCTGCTCTTGATATGGTTAGAGCTCCCCTCCTTAAGACACTCCCACCGAATGCAAAACTTTCACTTATTTAAGGCA
GACTTGCATCTGTTGCATATA-----------------------------------------------------------
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>chr5D_656
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---------------------------------------------GGTTGCTCCCCCCAGATCTCTGCCTCCGCGGCGAG
TGGGGAATAAGAGGGAGCCGCCGCCACCGCCGGCCGGCACCTCCGCTTCGCAGGTTGCCTCTGCTCTCTAATCCTAG--T
ATTACTTTCCTCTTTGCCCCGCTGCGCCCCCACCTTTTTT-----TTAGTTACGGGCGGCAGAGCTA-GTAAAGATGCGA
TTTTTCTGATGCACGCCACGCGACTTACTGATTC-TAGTTTCAGACAAAATTCAGTTTACGCATACTTGCATTATTATCT
CAAGTCCTTATTAACC--CCCT-----CTTG--------TTCTCCAACGTTCCTCGATGTTCTTT--TCAGCACT-GGAA
TGGGGAACTATCTGACGAGTAGAATAACAGCAGAGAAGGATGCCCATGTCA---AGCAGACATCGAAGAATCGCAATGGA
AGGCCTGGCCTTAAATTTCATGACCTTCCAGAGGTATGTTAGTTTTGCCTTTCAACTTGACCCTCAGGGTAAATAGATTT
CTCTACTTAAACTTGTCTTCTCCTTTTGCTCAAGGATGTACTATGCACAATTTTATCC----------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------A
AATTACCTGCAAAAGAGGCTGTTCGGACCAGTGTTTTGTCGAGTGACTGGAGATGTACATGGACAGCTTGCCCCAGACTA
AGCTTTGGTGCCGACGATATTAGTAAGAATGTGAAGGGGAAACCTCAGCGCACCCAGATGTTCATCGACCATGTTAATGC
GGTTTTGCGCAAGCACAGCGGCAGGGCTGTTGACCAACTTGAGATTAAATTTATATTCGAGAGCAAGCTTGTTGATTACC
TCAATAATTGGATTAGATTTGCTATGTCAGTCCACACAAAGAGTCTAGCTTTTGATTTGGCGCCACCTAACAATTTCCCG
GAATATGGGGATCATTACAGATTCCCATTTGAACAATTTACAGACAACAAAAGTGTATCCTGCCTAGCCTGTCTTCAACT
CAGCTTTGTACGTTTCGAACCACCTCCTA-CCAGTTTCATAGGTTTCCCAAACCTAAGAAAGCTTCATCTTCATGTAGTC
AAGACCACTAGGCAGGATCTCGAGAGTGTCTTGTGCAGTTGCGTTAATCTTGAGTGGCTGAGCTTACTCAGATGCCATCT
CAAGGATGAAATGAAGGTGGTTCGGCGGCCATTATCCCACCTGCGGTACTTGCATGTCGTGCACTGCGATATAACCAAGA
TAGAGTTCGATGCTCCAAATCTCTCCACCTTTGTTTATGATGGACCATACAGGCCTATTACCCTCCATCATGCTACTAAA
CTGGAAAATGTAAGATTTTGGTTCCGCGGTGCAGTTTTTCAGCATGCTACCGCTTCACTCCTCAATGGGCTACCAGATGT
ACAAAACCTGACATTGCAACTTGGAACGCAACGGCTAGAGGTAT-TTTAT-ATTGTGACAACATTCGAGTTATGGTTTAG
TTTGTCCCACTAATCTTGCAATAACGTTTGCTGT------TTTATCTTTCAGAGCCGGTGGACGTTAAATAGCCCTCGGG
TGTTTTCTCACCTCAGGCATGCGCAGATACTTTTGATTATACATCATGAAGATAGTGACAAAATCCTCTACTTGGTTTCT
TTTCTGAGGGTTGCTCCATTCATTGAGAGGTTGGAAGTACATGTGAGTAATATTCTCAATCGTTTTTTCTTTTCCTTTGC
AAG-----------------------------------------------------------------------------
----------GTATTATTTTCAACTTGCATGTAGGTGGCAGCAAGAAACCCTACTAATCTTGATGACTTATGCAGTTTCA
TGGCCTTTATACTTTGTGGTTTGCAACCGATGGACCTTCGAGACAAGAAATACCGCCGTGTGAAGATAAATATGTGAATC
TGAAGGACATGCGTGTTACAGGATTCAAAGGGGCAAGAGGCCAAGCTGAATTCCTCATGCATGCCGTTGAAAATGCTCCT
GCAATAGAGGCCGTAACTGTAGATACAGCTCAAAGGCTAACTGATGCTTGGGATCCAGAGGAACCAACCCCTAGACTAGA
TAGTGCCGCTCTTGATATGGTTAGAGGCCCTCTCCTTAAGAGACTCCCACCGAATGCAAAACTTTCACTTATTTAAGCCA
GA------------------------------------------------------------------------------
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>chr5B_706
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-------------------GCCGCCGCCGCCGGCCGGCACCTCCGCTCCGCAGGTTGCCTCTGCTCTCTAATCCTAG--T
ATTACTTTCCTCTTTGCCCCGCTGTGCCCCCACTTTTTTT-----TAGTTAC--GGCGGCCGAGCTC-GCAAAGATGCGA
TTTTTCTGATGCACACCACGCGACTTACTGATTC-TAGTTTCAGACAAAATTCAGTTTACGCATACTTGCATTATTATCT
CAAGTCCCTATTAACCCCCCCT-----CTTG--------TTCTCCAATGTTCCTCGATGTTCTTTGATCAGCACT-GGAA
TGGGGAACTATCTGACGAGTAGAATAACGGCAGAGAAGCATGCCCATGTTAAGCAG---ACATCCAAGAATCGCAATGGA
AGGCCTGGCCTTAAATTTCATGACCTTCCAGAGGTATCTTAGTTTTGCCTTTCGACTTGACGCTCAGGGTAAATTGATTT
CTCTACTTAAACTTGTCTTCTCCTTTTGCTCAAGGATGTACTGTGCACGATTTTATCC----------------------
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-------------------------------------------------------------------------------A
AATTACCTGCAAAAGAGGCTGTTCGGACCAGTGTTTTGTCGAGTGACTGGAGATGTACATGGACAGCTTGCCCCAGACTA
AGCTTTGGTGGCGATGATGTAAGTAAGAATGCGAAAAGGAAACACCAGCACACCCAGATGTTCATCGACCGCGTTAATGC
GGTTTTGACCAAGCACAGCGGCAGGGCTGTTGACCAACTTGAGATTAAATTTATATTTGAGACCAAGCTTGCCGATCACC
TCAACAATTGGATTAGATTTGCTATGTCAGCCCACACAGAGAGTCTAGCTTTTGATTTGGCGCCACCTAACAATTTCCCG
GACTATGGGGATCATTACAGATTCCCATTTGAACAATTTACAGACAACAAAAGTGTATCCTGCCTAGCCTGTCTTCAACT
CAGCTTTGTACGTTTCGAACCACCTCCTA-CCGGTTTCATAGGTTTCCCAAACCTAAGAAAGCTTCATCTTCATGTAGTC
AAGACCACTAGGCAGGATCTCGAGAGTGTCTTGTGCAGTTGCGTTAATCTTGAGTGGCTGAGCTTACTCAGATGCCATCT
CAAGGATGAAATGAAGGTGGTTCTACGGCCATTATCCCACCTGCGGTACTTGCATGTCGTGCACTGCGATATAACCAAGA
TAGAGTTCGATGCTCCAAATCTCTCCACCTTTGTTTATGATGGACCATACAGGCCTATTACCCTCCATCATGCTACGAAA
CTGGAAAATGTAAGATTTTGGTTCCGCGGTGCAGTTTTTCAGCATGCTACCGCTTCACTCCTCAATGGGCTACCAGATGT
ACAAAACCTGACATTGCAACTTGGATCGCAACGGCTAGAGGTAT-TTTAT-ATTGTGACAACATTCGAGTTATGGTTTAG
TTTGTGCTGCCAATCTTGCAATAATGCTTGCTGT------TTTATCTTTCAGAGCCGGTGGACGTTAAATAGCCCTCGGA
TGTTTTGTCACCTCAGGCATGCGCAGATACTTTTGATTATACATCGTGAAGATAGTGACAAAATCCTCTACTTAGTTTCT
TTTCTGAGGGTTGCTCCATTCATTGAGAGGTTGGAAGTACATGTGAGTAATATTCTCAATCGTTTTTTATTTTCCTTTGC
AAG-----------------------------------------------------------------------------
----------GTATTATTTTCAACCTGCATGTAGGTGGCAGCAGGAAACCCTACTAATCTTGATGACTTATGCAGTTTCA
TGGCCTTTATACTTTGTGGTTTGCAACCGATGGACCTTCGAGACAAGAAATACCGCCGTGTGAAGATAAATATGTGAATC
TGAAGGACGTGCGTGTTACAGGATTCAAAGGGGCAAGAGGCCAAGCTGAATTCCTCATGCATGCCGTTGAAAATGCTCCT
GCAATAGAGGCCGTAACTGTAGATACAGCTCAAAAGCTAACTGATGCTTGGGATCCAGACGAACCAACCCCTAGCCTAGA
TAGTGCCGCTCTTGATATGGTTAGAGGCCCTCTCCTTAAGAGACTCCCACCGAATGCAAAACTTTCACTTATTTAAG---
--------------------------------------------------------------------------------
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>chr5B_971
TGTTCGTC------------------------------------------------------------------------
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------------------------------------------------------CAATGTTCTTT--TCAGCACT-GGAA
TGGGGAACTATCTGACGAGTAGAATAACGGCAGAGAAGCATGCCCATGTTAAGCAGCAGACATCCAAGAATCGCAATGGA
AGGCCTGGCCTTAAATTTCATGACCTTCCAGAGGTATGTTAGTTTTGCCTTTCGACTTGACCCTCAGGGTAAATAGATTT
CTCTACTTAAACTTGTCTTCTCCTTTTGCTCAAGGATGTACTGTGCACAATTTTATCC----------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------A
AATTACCTGCAAAAGAGGCTGTCCGGACCAGTGTTTTGTCGACTGACTGGAGATGTACATGGACAGCTTGCCCCAGACTA
AGCTTTGGTGTCGATGATGTAAGTACGAATGCGAAAAGGAAACACCAGCACACCCAGATGTTCATCGACCGTGTTAATGC
GGTTTTGACCAAGCACAGCGGCAGGGCTGTTGACCAACTTGAGATTAAATTTATATTCGAGACCAAGCTTGTCGATCACC
TCAATAATTGGATTAGATTTGCTATGTCAGCCCACACAAAGAGTCTAGCTTTTGATTTGGCGCCACCGGACAATTTTCCC
AAATATGGGGATCATTACAGATTCCCATTTGAACAATTTACAGACAACAAAAGTGTATCCTGTCTAGCGTGTCTTCAACT
CAGCTTTGTATGTTTCGAACCACCTCCTG-CCAATTTCATAGGTTTCCCAAACCTAAGAAAGCTTCATCTCCATGTACTC
AAGACCACTAGGCAGGATCTCGAGAGTATCTTGAGCAGTTGTGTTAATCTTGAATGGCTGAGCTTACTCAGATGCCATCT
CAAGGATCAAATGAAGGTGGTTCGGCGGCCATTGTCCCACCTGCGCTACTTGAAAGTCGTGCACTGTGATATAACCAAGA
TAGAGTTCAATGCTCCAATGCTCTCCACCTTTGTTTATGATGGACCATACATACCTATTACCCTCCATCATGCTGCGAAG
CTGGAAAATGCAACAATTAGGTTCCTCGGCGCAGTTTTTCAGCATTGTATCGCGTCACTCCTCAATGGGCTACCAGATGT
ACACAACCTGACACTGCATCTTGGAATGCAAGAGCTTGAGGTAT-TTTATTACTGGGACAATTTTCTAGTTATGGCAGT-
CACG------TAATCTTGCAATAACCTTTGTTGT------TTTATCTTTCAGGCCCGGTGGATGTTAAATAGCCCTCGTG
TGTTTTCTCACCTCAGGCATGTGCAAATACTGTTGATTATACATTATGAAGAATATGACAAAATCCTCTACTTAGTTTCT
TTTTTAAGGGTTGCTCCGTTCATTGAAAAGTTGGAAGTACATGTGAGTAATGCTCTCAATAGTTT-CCCC---CCTTTGT
CAG-----------------------------------------------------------------------------
----------CCATTATTTTCAGTTTGCATGTAGGTGGTAACAAGAAATCCTACTAATCTTGATGAATTTTGCAGTTTCA
TGACATTGGCACTTTGTGGTTTGCAACCGATGGACCTTTGAGACAAGAAATGCCGCCGTGTGAAGATAAATTAGTTAATC
TGAAGGACGTTCGAGTTACAGGATTCAGAGGGGCACGCGGCCAAGCTGAATTCCTTATGCACGTGGTTGAGAATGCTCCT
GCAATAGAGGTCGTGACTGTAGATACAGCTCAAAGGCTAACTGATGCTTGGGATCCAGATGAACCAATCCCTAGACTAGA
TAGTGCTGCTCTTGATATGGTTAGAGCTCCTCTCCTTAAGACACTCCCACCGAATGCAAAACTTTCACTTATTTAAGGCT
GACTTGCATCTGTTGTAAAT------------------------------------------------------------
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>chr7B_1347
--------------------------------------------------------------------------------
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----------------------------------------------------CCCAGATGTTCATAGACCATGTTAATGC
AGTCTTGAAAAAGCACCACGGCAAGGTTGTCGACAATCTTGAGATAAAATTCGTATTTGAGAGCAAGCTAGTTTACCATC
TCAACAGTTGGATAAGGTTTGCTATGTCCTCCCGGACTAAGAATCTATCATTTGATTTGGCACCACTGCCGGAATTTTGG
AAATATAGGAATCATTACAGGTTCCCGTTTGAAC---TTTTAGACATGGATAGTGTATCCTGTCTACGTTGTCTTCAACT
CAGATTTGTATGTTTCAAACCACCCCCTTCCCAGTTTCC-AGGTTTCCCAAACCTAAGAAAGCTTGATCTCCATTTACTC
AACACCACCGGACATGATCTCGAGAATATCTTGTGCAACTGCTGTAATCTTGAGTGGCTGAGCATAGTCAGGTGTGATCT
GGACGATGAACTGAAGGTGGTCCAGCGACCATTGTCCAATCTGCAGTACCTAAGAGTCAAATTCTGCGGGTTCACCAAGA
TAGAGTTCCATGCTGCCAAGCTCTCCACCTTTGTGTATAAAGGGGACTGCATACCTATTGCCTTCCATCAAGCTCCCGAG
ATGGAAAATGCAGAAATTTGTTTCTGTGCTTCTACCTTTCGGCGTGGTTCAGCTGTGGTTCTCAATGGGCTTCCACATGT
TCCGAACCTCACTTTGAAAATTTCAGTTGAAGTGCTAGAGGTATGTATGTTGTTAGAACAAGCTTCTAGGTTGTGCAAT-
ATGG------TTTTATCTTTTCGCTGAGCTCAACTTGCTCTTTGTCTTTCAGACTACATGGACATCAGATAGCCATTACA
TGTTCCCGCAGCTCAAGCATCTGCAGATAATATTGGCTGTAGATCATAAACATGATGACAAGATTCTCTACTTGGTTCCC
CTTTTGAGGGCTGCTCCGTTTATTGAACACTTGGAAGTACATGTGAGTATTTTCT-------------------------
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-------------------------------------
>SNPs
-S-S-SSSSSSS--------------------------------------------------S-S-SSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------S------------------------------------------------------------------
-------------------------------------------------------S------------------------
--------------------------------------------------------------------------------
------------------------------------------SSS-----------------------------------
-----S-----------------------------------------------------------------S-------S
--------S------------------------------------------------------------------S----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----S--------------------------------------S------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------S----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
--SS----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------SSSSS----------------------------
------------------------S------------SSS----------------------------------------
--------------S-----------------------------------------------------------------
---------------------------------------SSSSSSSS--------------S------------------
-S------------------------------------------------------------------------------
-----------------------------------------------------------SSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_1756
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------------------------------------CCTCAATCTTCTTTTCAGCGCTT----
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-------------------------------------
>reverse_3935
--------------------------------------------------------------------------------
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--------------ACGTAGGAGGCCATGGGG------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------
