>input_sequence_43467
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---------------------------------------------------------------ATGATGGAGACATCACC
TGTATACTCTGTGGCTAGAGATGCATCAGGTGATTATTCACTGCATTTA------TCAGTTATTATTTAATTTCCATGAA
ATATTTGTGGCTTGCTGGTTGCCACTGACCTTCCATGTTAACTGTTCGTTTGTAGCTTTCGAGGGTCCTGTGCTTCATGT
TATTGCATCATTATTGCGATGCCACATGGTCTTCTGTCACTTCCGACGCT----AGTATATGCATACGTTGTAATACACG
TTGATATTAGGGAGGAAATTAATTGCACGTTGATATTAGGCATGATATCAATTAC-------------------------
---------------------A-GTTAATTATGTGATTAGCACAAACGTTGATATTTGGTATGATATTGATTGCACGCTA
AACATGTTGAGCGCTCACCAT-GGAGCAATCTAGATTGTTGGATTGTCATGGTTTGATGGACGAGATTAATTGGATCTG-
CCCCTTTGGGTCTTTCTATATTGGTATAAATATAAATGTTACAAATGCCTAGTGTCAGAACGATT--TATGATGCAAGAG
TTAGAATAGAAATATGTACATTGG--AAAAAGTGGTCATGAGACTGTTTTCATAGTATAAGGTGTGGTGTAACTTTGTAG
GGAATGCGTGGAAAGCCCTATTTGATTTAGCTGGGGGTTTGATACGGGAGTACGATCAAGAAGCTATGGTATCCGTAAGC
AAATTTGTCGATCAGTTACCATCAGTAATGAATCAGGTATCATATTTATAT--GAATCTAACTTATATTTCATTAATGAA
ATGTGCTCTGACAACATGTTTGTCCATAGGTATCTTTTTAATCCTGAACGTACATTCTTCCCATGTTATTTACAGGTTAC
AGAAGGTGTATCTGAATTCAAGCCAACACCACCTGAGAACCGTGAATTCTGCAAGAGTTCTTACAGTGTAGCTAATACAT
TATTGGTACTGTTGAGAAACTTGCACTTACTTAAGCAAACCTCTTTCCGTTCTAATTTAGCATTAGTTAATGCTCCATGT
ATGTATTGTAGGTGAAATTCAGCGTTGATGCTATTGATGATACAGACATAATTGAGGACATCTTGAGACCCCGGGTAGAC
TCAATTGGTGGACAAATAAAGAAGGTCGTACTGTCAGGAACACATCTAACTCCGTGTATACAGGTACAGCTAGTCATATT
TTTCATCTTCAAAT------------------------------------------------------------------
--------------------------------------------------------------------------------
GGAGTTCTCGTAATCACTAGATCATGTTGAGGACCACTCCTCTGTTAATATATGTAATACCATGGGAGGTTGAAGACCAC
TCCTCTGTTAATATATGTAATACGATGGGAGGGCTGTTTTGGTTCTGGGGAGCATATGCCCCTGAATGAACAGTAAATTC
AAAATAAATAGTAAAACAATTTAAAAAGTCAGA--TTTTTTTGGTATATGTTCATGTTAGTGTAACAAGCGTGTGTGACA
ATTTTCATACGAAACGGGATAGCAGT------------------------------------------------------
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---------------------------GCTTCCTGAAAAATAACAAAATTAAGTGTAACATTTGATGTTCAGCTTGTTTT
TTTTTCTGCACAGGTCAAAATGCTAAAACTTCCCACATAAAAATTTGTAGAATTTGA-----------------------
----------------------AAAAA-AAACATTTGTGGCACGTGCGGGAGCATGTGCTCCTGGGAGACGAATTGGATT
TCCACATTTAATGTGTAC-ACATTAATATTCATGTGCC------CCAGGCACTAACTATAGCTATACTACAGGATGTTAA
ATGGCAGGTTGGTTCAGAATACACTCCAGCGGATGCTCTGGCGCAGGGCTTAAAATCATTGGCTCTCAATGAGACTAGGG
TCCTCTCAAGAACTATCGCTGACTACTTCAGATCCCTTTAG---------------------------------------
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>chr5B_1_TraesCS5B01G212700
ATGTCTATAAGCTGATCCGCTGATTGAATTATTGAAGCCAAGGGACATTGAGTCTATGAGCGAAACAATATTTCCCGCAG
AAACACTTAAAGATAAAGTGGTGCCTTTTTAAATATCTTGTTTTATTAGTCTTTCGAAGATACCTGTATTCTTGTCAGTT
CACAATTCCCAGATTCCAGACACATGCAAGAGTTTGTCCAGCATCACCGTTTGAGATTCTGAACTT-AGAGTCATCAAGC
GGTCGTTGTGGTTCAGATCAGGGATCTGCAGATTGCAGACTGACTTGATATTGAACCATGTTTAGAAACAATTCAACATG
GTTATAGGCCAATAACTCCCCTACCCACGCAATAAAACATACTCGCTACACTCACAAAATACCCAGGTTTCT-GCCCTGA
ATTATGCACATGTATACAATACCTGCAGTTCCGTCCAAACCCACACAATCCCCCCACTTGA-TTACTTTTCGTCGTGTAA
AAACACACATGTTCCTGATGTTGCACTGATCTATTAGTTATTACTAGCTTGTGTTTGGTTCTCCCCAGTTTTATGGTTAG
GGGATGAGCTGAGTTCTATGCTGTAGGTATGTTGAACTACAGCTAGCAGCTCCATATTGTGAAGTACAGAGCGCCAAAAC
TTCAGGATCAGTAAACAATTTATGGTTTAGATATTGGACTAACAAATTCAGCCATAAAAGAATAAACATTTTTTCAG---
------TTGTAATCAATTAAAGCATCAGGGGAGTGCAAAAGGTCGAACCCACCGACCCCCCAAAAAA-TCGTGACATACA
AGAATTAGACTATTAGCAAAGTGTTTGAGAAACATGTAGCAATGCTACTTGATACTTCATTTCTAACGTACAACTTTGTG
CAA---------ATAGGTACTGACACGTTGCATTCTTTAATGTGTTACCTTTTGCTCTCTCCATTTTTTGTT-GTTTATT
ATTTTATCCTTGATAATTTTTTGTTTCATACAGATAGGCCCCCTCATTAGTCAACTAACGCCTATGATGGAGACATCACC
TGTATACTCTGTGGCTAGAGATGCATCAGGTGATTATTCACTGCATTTA------TCAGTTATTATTTAATTTCCATGAA
ATATTTGTGGCTTGCTGGTTGCCACTGACCTTCCATGTTAACTGTTCGTTTGTAGCTTTCGAGGGTCCTGTGCTTCATGT
TATTGCATCATTATTGCGATGCCACATGGTCTTCTGTCACTTCCGACGCT----AGTATATGCATACGTTGTAATACACG
TTGATATTAGGGAGGAAATTAATTGCACGTTGATATTAGGCATGATATCAATTAC-------------------------
---------------------A-GTTAATTATGTGATTAGCACAAACGTTGATATTTGGTATGATATTGATTGCACGCTA
AACATGTTGAGCGCTCACCAT-GGAGCAATCTAGATTGTTGGATTGTCATGGTTTGATGGACGAGATTAATTGGATCTG-
CCCCTTTGGGTCTTTCTATATTGGTATAAATATAAATGTTACAAATGCCTAGTGTCAGAACGATT--TATGATGCAAGAG
TTAGAATAGAAATATGTACATTGG--AAAAAGTGGTCATGAGACTGTTTTCATAGTATAAGGTGTGGTGTAACTTTGTAG
GGAATGCGTGGAAAGCCCTATTTGATTTAGCTGGGGGTTTGATACGGGAGTACGATCAAGAAGCTATGGTATCCGTAAGC
AAATTTGTCGATCAGTTACCATCAGTAATGAATCAGGTATCATATTTATAT--GAATCTAACTTATATTTCATTAATGAA
ATGTGCTCTGACAACATGTTTGTCCATAGGTATCTTTTTAATCCTGAACGTACATTCTTCCCATGTTATTTACAGGTTAC
AGAAGGTGTATCTGAATTCAAGCCAACACCACCTGAGAACCGTGAATTCTGCAAGAGTTCTTACAGTGTAGCTAATACAT
TATTGGTACTGTTGAGAAACTTGCACTTACTTAAGCAAACCTCTTTCCGTTCTAATTTAGCATTAGTTAATGCTCCATGT
ATGTATTGTAGGTGAAATTCAGCGTTGATGCTATTGATGATACAGACATAATTGAGGACATCTTGAGACCCCGGGTAGAC
TCAATTGGTGGACAAATAAAGAAGGTCGTACTGTCAGGAACACATCTAACTCCGTGTATACAGGTACAGCTAGTCATATT
TTTCATCTTCAAAT------------------------------------------------------------------
--------------------------------------------------------------------------------
GGAGTTCTCGTAATCACTAGATCATGTTGAGGACCACTCCTCTGTTAATATATGTAATACCATGGGAGGTTGAAGACCAC
TCCTCTGTTAATATATGTAATACGATGGGAGGGCTGTTTTGGTTCTGGGGAGCATATGCCCCTGAATGAACAGTAAATTC
AAAATAAATAGTAAAACAATTTAAAAAGTCAGA--TTTTTTTGGTATATGTTCATGTTAGTGTAACAAGCGTGTGTGACA
ATTTTCATACGAAACGGGATAGCAGT------------------------------------------------------
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---------------------------GCTTCCTGAAAAATAACAAAATTAAGTGTAACATTTGATGTTCAGCTTGTTTT
TTTTTCTGCACAGGTCAAAATGCTAAAACTTCCCACATAAAAATTTGTAGAATTTGA-----------------------
----------------------AAAAA-AAACATTTGTGGCACGTGCGGGAGCATGTGCTCCTGGGAGACGAATTGGATT
TCCACATTTAATGTGTAC-ACATTAATATTCATGTGCC------CCAGGCACTAACTATAGCTATACTACAGGATGTTAA
ATGGCAGGTTGGTTCAGAATACACTCCAGCGGATGCTCTGGCGCAGGGCTTAAAATCATTGGCTCTCAATGAGACTAGGG
TCCTCTCAAGAACTATCGCTGACTACTTCAGATCCCTTTAGAAGCTTAGAGTATAATTTATTCTATGTCCATTGAAGTTC
AGAATGCTGCTTATGAAGGTATGCGATACTACTGAATCTTTGTGTAACTTCTGT--------------GGACCATGGCTT
GCATTCATCATACATTTATTTACCACACTGGAGATGCTTTTACACACATCAGAGCCAGAAGGGCAGAAA----TATCTGT
AGAATCTATAGTGGGTACTATACAGTCTTCATTCAGTTTCATCACAAACA-TTTTGCTGGTTGCTGCTTTCCTGATGCAG
TTGGCTGGGGCGTGGGGGA-TTGCCATTATAAGGACACACCGGAGTAAATATTATAGCACC--TACGACTCTGAAGAGCG
ATGTATTTGGACCGAGTTGAGTACGTTGGCACCGGCAGGCCGTACCACCTCTATATGGTCTGATCAAGATTTGGAGGTTG
GGACCAAGTTGTTGGACTCTAGTCAGGCTATACACTGCATTTAACCCGAAATCCAAGAGAACAACGATCCATTCTCAGGT
ATGGCACCAGCGACGCTGAGTTGGTCGTATACACCTTCCAGCAGGCAGGCAGGCAGGCA----AGCAAGTCTGTCCATGC
ACGGCCTTCTTCTGGTTGGCGTTTTACGTGTAATACGACAATATATACAT---CATCATGTGTAGATTGCCATGTTTTAT
AGTCTGTATAATAGTAACATTTGGGACAGTATTGTGCACATGTTCTACAATGTTACAAGTGCAACAGTTGCGAGTTATTT
GATCATGAATTTCACCGGTTGGGTTAAAAGCTCGGTAAGAAGTACCGCGCCCAGTTCTAGAGAAAATTAGAGAGTTCAGA
TGATAGCCGTTGTTTCTTTTCTTGTGGCTTGAATGGTGGGTGAAAAAGAGCAGCCGACGCATGGAT----------CCAT
GTCCACTTGTCCGGCTTGAGAAAG----AAAATATCCATGGGGTACGGATGCGCTGCGTGAGCCCAGTTGACCGTTGTCT
GCGCACGCATCGCAACTTGTACGCGGTGCGGACGGATGGACGAC
>chr5B_1
ATGTCTATAAGCTGATCCGCTGATTGAATTATTGAAGCCAAGGGACATTGAGTCTATGAGCGAAACAATATTTCCCGCAG
AAACACTTAAAGATAAAGTGGTGCCTTTTTAAATATCTTGTTTTATTAGTCTTTCGAAGATACCTGTATTCTTGTCAGTT
CACAATTCCCAGATTCCAGACACATGCAAGAGTTTGTCCAGCATCACCGTTTGAGATTCTGAACTTTAGAGTCATCAAGC
GGTCGTTGTGGTTCAGATCAGGGATCTGCAGATTGCAGACTGACTTGATATTGAACCATGTTTAGAAACAATTCAACATG
GTTATAGGCCAATAACTCCCCTACCCACGCAATAAAACATACTCGCTACACTCACAAAATACCCAGGTTTCTGGCCCTGA
ATTATGCACATGTATACAATACCTGCAGTTCCGTCCAAACCCACACAATCCCCCCACTTGA-TTACTTTTCGTCGTGTAA
AAACACACATGTTCCTGATGTTGCACTGATCTATTAGTTATTACTAGCTTGTGTTTGGTTCTCCCCAGTTTTATGGTTAG
GGGATGAGCTGAGTTCTATGCTGTAGGTATGTTGAACTACAGCTAGCAGCTCCATATTGTGAAGTACAGAGCGCCAAAAC
TTCAGGATCAGTAAACAATTTATGGTTTAGATATTGGACTAACAAATTCAGCCATAAAAGAATAAACATTTTTTCAG---
------TTGTAATCAATTAAAGCATCAGGGGAGTGCAAAAGGTCGAACCCACCGACCCCCCAAAAAA-TCGTGACATACA
AGAATTAGACTATTAGCAAAGTGTTTGAGAAACATGTAGCAATGCTACTTGATACTTCATTTCTAACGTACAACTTTGTG
CAA---------ATAGGTACTGACACGTTGCATTCTTTAATGTGTTACCTTTTGCTCTCTCCATTTTTTGTT-GTTTATT
ATTTTATCCTTGATAAATTTTTGTTTCATACAGATAGGCCCCCTCATTAGTCAACTAACGCCTATGATGGAGACATCACC
TGTATACTCTGTGGCTAGAGATGCATCAGGTGATTATTCACTGCATTTA------TCAGTTATTATTTAATTTCCATGAA
ATATTTGTGGCTTGCTGGTTGCCACTAACCTTCCATGTTAACTGTTCGTTTGTAGCTTTCGAGGGTCCTGTGCATCATGT
TATTGCATCATTATTGCGATGCCACATGGTCTTCTGTCACTTCCGACGCT----AGTATATGCATACGTTGTAATACACG
TTGATATTAGGGAGGAAATTAATTGCACGTTGATATTAGGCATGATATCAATTAC-------------------------
---------------------ACGTTAATTATGTGATTAGCACAAACGTTGATATTTGGTATGATATTGATTGCACGCTA
AACATGTTGAGCGCTCACCAT-GGAGCAATCTAGATTGTTGGATTGTCATGGTTTGATGGCCGAGATTAATTGGATCTG-
CCCCTTTGGGTCTTTCTATATTGGTATAAATATAAATGTTACAAATGCCTAGTGTCAGAACG-TT--TATGATGCAAGAG
TTAGAATAGAAATATGTGCATTGG--AAAAAGTGGTCATGAGACTGTTTTCATAGTATAAGGTGTGGTGTAACTTTGTAG
GGAATGCGTGGAAAGCCCTATTTGATTTAGCTGGAGGTTTGATACGGGAGTACGATCAAGAAGCTATGGTATCCGTAAGC
AAATTTGTCGATCAGTTACCATCAGTAATGAATCAGGTATTATATTTATAT--GAATCTAACTTATATTTCATTAATGAA
ATGTGCTCTGACAACATGTTTGTCCATAGGTATCTTTTTAATCCTGAACGTACATTCTTCCCATGTTATTTACAGGTTAC
AGAAGGTGTATCTGAATTCAAGCCAACACCACCTGAGAACCGTGAATTCTGCAAGAATTCTTACAGTGTAGCTAATACAT
TATTGGTACTGTTGAGAAACTTGCACTTACTTAAGCAAACCTCTTTCCGTTCTAATTTAGCATTAGTTAATGCTCCATGT
ATGTATTGTAGGTGAAATTCAGCGTTGATGCTATTGATGATACAGACATAATTGAGGACATCTTGAGACCCCGGGTAGAC
TCAATTGGTGGACAAATAAAGAAGGTCGTACTGTCAGGAACACATCTAACTCCGTGTATACAGGTACAGCTAGTCATATT
TTTCATCTTCAAAT------------------------------------------------------------------
--------------------------------------------------------------------------------
GGAGTTCTCGTAATCACTAGATCATGTTGAGGACCACTCCTCTGTTAATATATGTAATACCATGGGAGGTTGAAGACCAC
TCCTCTGTTAATATATGTAATACGATGGGAGGGCTGTTTTGGTTCTGGGGAGCATATGCCCCTGAATGAACAGTAAATTC
AAAATAAATAGTAAAACAATTTAAAAAGTCAGA--TTTTTTTGGTATATGTTCATGTTAGTGTAACAAGCGTGTGTGACA
ATTTTCATACAAAATGGGATAGCAGT------------------------------------------------------
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---------------------------GCTTCCTGAAAAATAACAAAATTAAGTGTAACATTTGGTGTTCAGTT--TTTT
TTTTTCTGCACAGGTCAAAATGCTAAAACTTCCCACATAAAAATTTGTAGAATTTGA-----------------------
----------------------AAAAAAAAACATTTGTGGCACGTGCGGGAGCATGTGCTCCTGGGAGGCGAATTGGATT
TCCACATTTAATGTGTAC-ACATTAATATTCATGTGTG------CCAGGCACTAACTATAGCTATACTACAGGATGTTAA
ATGGCAAGTTGGTTCAGAATACACTCCAGCGGATGCTCTGGCGCAGGGCTTAAAATCATTGGCTCTCAATGAGACTAGGG
TCCTCTCAAGAACTATCGCTGACTACTTCAGATCCCTTTAGAAGCTTAGAGTATAATTTATTCTATGTCCATTGAAGTTC
AGAATGCTGCTTATGAAGGTATGCGATACTACTGAATCTTTGTGTAACTTCTGT--------------GGACCATGGCTT
GCATTCATCATACATTTATTTACCACACTGGAGATGCTTTTACACACATCAGAGCCAGAAGGGCAGAAA----TATCTGT
AGAATCTATAGTGGGTACTATACAGTCTTCATTCAGTTTCATCACAAACA-TTTTGCTGGTTGCTGCTTTCCTGATGCAG
TTGGCTGGGGCGTGGGGGA-TTGCCATTATAAGGACACACCGGAGTAAATATTATAGCACC--TACGACTCTGAAGAGCG
ATGTATTTGGACCGAGTTGAGTACGTTGGCACCGGCAGGCCGTACCACCTCTATATGGTCTGATTAAGATTTGGAGGTTG
GGACCAAGTTGTTGGACTCTAGTCAGGCTATACACTGCATTTAACCCGAAATCCAAGAGAACAACGATCCATTCTCAGGT
ATGGCACCAGCGACGCTGAGTTGGTCGTATACACCTTCCAGCAGGCAGGCAGGCAGGCAGGCAAGCAAGTCTGTCCATGC
ACGGCCTTCTTCTGGTTGGCGTTTTAGGTGTAATACGACAATATATACAT---CATCATGTGTAGATTGCCATGTTTTAT
ATTCTGTATAGTAGTAACATTTGGGACAGTATTGTGCACATGTTCTACAATGTTACAAGTGCAACAGTTGCGAGTTATTT
GATCATGAATTTCACCGGTTGGGTTAAAAGCTCGGTAAGAAGTACCGCGCCCAGTTCTAGAGAAAATTAGAGAGTTCAGA
TGATAGCCGTTGTTTCTTTTCTTGTGGCTTGAATGGTGGGTGAAAAAGAGCAGCCGACGCATGGAT----------CCAT
GTCCACTTGTCCGGCTTGAGAAAG----AAAATATCCATGGGGTACGGATGCGCTGCGTGAGCCCAGTTGACCGTTGTCT
GCGCACGCATCGCAACTTGTACGCGGTGCGGACGGATGGACGAC
>chr5A_1
ATGTCTATAAGCTGATCCACTGATTGAATTATTGAAGCCAAGGAACATTGAGTCTATGCGCAAAACAATATTTCCTGCAG
AAACACTTAAAGATAAAGTGGTGCCTTTTTAAATATCTTGTTTTATTAGTCTTTCGAAGATACCTGTATTCTTGTAAGTT
CATAATTCCCAGATTCCAGACACATGCAAGAATTTGTCCAGCATCACCGTTTGAGATTCTGAACTTTAGAGTCATCAAGC
GGTCGTTGTGGTTCAGATCAGGGATCTGCAGATTGCAGACTGACTTGATATTGAACCATGTTTAGAAACAATTCAACATG
GTTATAGGCCAATAACTCCCCTACCCACGCAATAAAACACA---------------------CCAGGTTTCTGGCCCTGA
ACTATGCACATGTGTACAATACCTGCAGTTCCGTCCAAACCCACACAATCCCCCCACTTTATTTACTTTTCGTCATGTAA
AAACGCACATGTTCCTGATGTTGCACTGATCTATTAGTTATTACTAGCTTGTGTTTGGTTCTCCCCAGTTTTATGGTTAG
GGGATGAGCTGATTTCCATGCTGTATGTATGTTGAACTACAGCTACCAGCTCCATATTTTGAAGTACAGAGCGCCAAAAC
TTCAGGATCAGTAAACAATTTATGGTTTAGATGTTGGACTAACAAATTCAGCCATAAAATAATTAACA-TTTTTTCAGTT
GTAAACTTGTAATCAATTAAACCATCAGGGCAGTGCAAAAGTTCGAACCCACCGACCCCCCAAAAAAATTGTGACTTACA
AGAATTAAACTATTAGCAAAGAGTTTGAGAAACATGTAACAATGCTATTTGATTCTTCATTTCCAACGTAGAACTTTGTG
TAAACAACTGGTATAGGTACTGACACGTTGCATTCTTAGTT-TGTTACCTTGTGCTCTCTCCATTTTTTGTTTGTTTGTT
ATTTTATCCTTGATAAATTTTTGTTTTATGCAGATAGGCCCCCTCATTAGTCAACTAACACCTATGATGGAGACATCACC
TGTATACTCTGCGGCAAGAGATGCATCAGGTGATTATTCACTGCATTTA------TCAGTTATTATTTAACTTCCATGAA
ATATTTGTGGCTTGCTGGTTGCCACTAACCTTCCATGTTAATTGTTAGTTTGTAGCTTTCGAGGTTCCTGTGCTTCATGT
TATTGTATCATTGTTGCGATACCACATGGTCTTCTGTTACTTCCGACGCT----AGCATATGCGTACGTGC-AACACACG
TTGATATTAGGGAGGAAATTAATTGCACGTTGATATTAGGTAGGATATAATGATATAACACA------------------
------------------------TTAATTATGTGATTAGCACAAACGTTGATATTTGGTATGATATTAATTGCACGCTA
AACATGTTGAGCGCTCACCATTGGAGCAATCTAGATTGTTGGATTGTCATGGTTTGATGGCCGAGATTAATTGGATCTG-
CCCCTTTGGGTCTTTTTATATTGGTATAAATATAAATGTTACAAATGCCTAGTGTCAAAACG-TTAGTATGATGCAAGAG
TTAGAATAGAAATATGTACATTGACAAAAGAGTGGTCATGAGACTGTTTTCATAGTAAC-GGTGTGGTGTAACTTTGTAG
GGAATGCGTGGAAGGCCCTATTTGATTTAGCTGGAGGTTTGATACGGGAGTACGATCGAGAAGCTATGGTATCCGTAAGC
AAATTTGTCGATCAGTTACCATCAGTAATGAATCAGGTATTATATTTATAT--GAATCTAACTTATATTTCATTAGTGAA
ATGTGCTCTGACAACATGTTTGTCCATATATATCTTTTTAATCCTGAACATACATTCTTCCCATGTTATTTACAGGTTAC
AGAAGGTGTATCTGAATTCAAACCAACACCACCTGAGAACCGTGAATTCTGCAAGAATTCTTACAGTGTAGCTAATACAT
TATTGGTACTGTTGAGAAACTTGC----ACTTAAGCAAACCTCTTTCCGTTCTAATTTACCAATCGCTAATGGTCCGTGT
ACGTATTGTAGGTCAAATTCAGCGTTGATGCTATTGATGATACAGACATAATTGAGGACATCTTGAGACCTCGGGTAGAC
TCAATTGGTGGACAAATAAAGAAGGTCGTACTGTCAGGAACACATCTAACTCCGTGTATACAGGTACAGCTAGTTATTTT
TTTCACCTTCAAATTGTATGGTGCATCAAATGCAGTTATATAGAAATAGAACTCTGTAAAATTCGTGTAGAACTTGTTTG
ATTACTGTGATTCACCACCAATAGTATCTACCTGGTGCTATCACTAGAAAACAAAAGGATATTTTTAGTTTAGTCGGGTT
GGAATTCTCAGAGTCACTGGATCATATCTTAGACCAGTGCTCTGTTAATAT--GTAATACCATTTATGTATA--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------AA-ACATTAATATTAATGTCTGCCAGTGCCAGGCACTAACTATAGCTATACTACAGGATGTTAA
ATGGCAGGTTGGTTCAGAATACACTCCAGCGGATGCTCTGGCGCAGGGCTTAAAATCATTGGCTCTCAATGAGACCAGGG
TCCTCTCAAGAACTATCGCTGACTACTTCAGATCCCTTTAGAAGCCTAGATTATAATTTATTCTATGTCCATTGAAGTTC
AGAATGCTGCTTATGAAGGTATGTGACACTACTGAATCTTTGTGTAACTTCTGTGGTGTAAAAACCTAGGACCATGGCTT
GCATTAATCATACATTTATTTACCACATTGGAGATGCTTTTACACACATCAGAGCCAGAAGGGCAGAAATATCTATCTGT
AGAATCTATAGTG----CTATACAGTCTTCATTCAGTTTCATCACAAACA-TTTTGCTGGTTGCCGCTTTCCTGATGCAG
TTGGCTGGGGTGTGGGGGGGTTGCCATTACAAGGACACACCGGAGTAAATATTATAGCACCTAGGACTC---GAAGAGCG
ATGTATGTGGACCGAGTTGAGTACGTTGGCACCGGCAGGCCGTACATCTACTATATGATCTGATCAAGATTTGGAGGTTG
GGACCAAGTTGTTGGACTCTAGTCAGGCTATGCACTGCATTTAACCCGAAATCCAAGAGAACAACGATCCATTCTCAGGT
ATGGCACCAGCGACGCTGAGTTGGCCGTATACACCTTGCAGCAGGCAGGCAGGCAAGCCTGTCCAT--------------
---GCCTTCTTCTGGTTGTCATTTTACGTGTAATACGACAATATATACTTATACATCATGTGTAGATTGCCATGTTATAT
GTACTGTAG---AGTAACATATGGGACAGTATTGTGCACATGTTGTAGAATGTTACAAGTGCAGCAGTTGTGAGTT----
GGTCATGAATTTCACCGGTTGGGTAA-AAGCCCGGTAAGAACTACCGTGCCTAGTTCTAGAGTAAATTAGCCAGTTCAGA
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>chr5D_1
ATGTCTATAAGCTGATCTACTGATTGAATTATTGAAGCCAAGGGACATTTAGTCTATGAGCAAATCAATATTTCCCGCAG
AAACACTT--AGATAAAGTGGTGCCTTTTAAAATATCTTGTTTTATTAGTCTTTTGAAGATACCTGTATTCTTGTA----
----------AGATTCCAGACACATGCAAGAGTTTGTCCAGCATCACCGTTTGAGATTCTGAACTTTAGAGTCATCAAGC
GGTCGTTGTGGTTCAGATCAGGGATCTGCAGATTGCAGACTGACTTGATATTGAACCATGTTTAGAAACAATTCAACATG
GTTATAGGCCAATGACTCCCCTACCCACGCAATAAAACACACTCGCTACACTCACAAAATACCCAGGTTTCTGGCCCTGA
ACTATGCACATGTATACAACACCTGCAGTTCCGTTCAAACCCACACAATCCCCCCACTTGA-TTACTTTTTGTCGTGTAA
AAACACACATATTCCTGATGTTGCACTGATCTATTAGCTATTACTAGCTTGTGTTTGGTTCTCCCCAGTTTTATGGTCAG
GGGATGAGCTGAGTTCTATTCTGTATGTATGTTGAACTACAGCTAGCAGCTCCATATTGTGAAATACAGAGCGACAAAAC
TTCAGGACCAGTAAACAATTTATGGTTTAGATATTGGACTAACAAATTCAGCCATAAAATAATTAACA-TTTTTCAG---
------TTGTAATCAATTAAAGCATCAGCCATGTTTAAGAATGT-------------------AAAT-TTGTGACTTGCA
AGAATTAGACTATTAGCAAAGCGTTTGAGAAACATGTAGCAATGCTACTTGATACTTCATTTCCAACGTACAACTTTGTG
CAAACAACTGGTATAGGTACTGACACGTTGCATTCTTAGTT-TGTTAGCTTGTGCTCTCTCCATTTTTTTTTATCT----
---------TTGATAAATTTTTGTTTTATACAGATAGGCCCCCTCATTAATCAACTAACGCCTATGATGGAGACATCACC
TGTATACTCTGTGGCAAGAGATGCATCAGGTGATTATTCACTGCATTTACATTTATCAGTAATTATTTAACTTCCATGAA
ATATTTGTGGCTTGCTGGTTGCCACTAACCTTCCATGTTAACTGTTAGTTTGTGGCTTTTGAGGTTCCTGTGCTTCATGT
TATTGCATCGTTGTTGCTATGCCACATGGTCTTCTGTTACTTCTGACGCTCGCTAGTATATGCGTACGTGC-AATGCACG
TTGATATTAGGGTGGAAATTAATTGCACATTGATATTAGGTAGGATATCAATTACTCCCTCTGTAAAGAAATATAAGAGC
GTTTAGATACAGCGGGAGTACACGTTAGTTATGTGATTAGCACAAATGTTGACATTTGGTATGAT-TTAATTGCATGCTA
AACATGTTGAGCGCTCACCATTGGAGCAATCTAGATTATTGGATTGTCATGGTTTGATGGCTGAGATTAATTGGATCTGC
CCCCTTTAGGTCTTTTTATATTGGTATAAATATAAATGTTACAAATGCCTAGTGTCAAAACG-TTAGTATGATGCAATAG
TTAGGATAGAAATATGTACATTGG--AAAAAGTGGCCATGAGACTGTTTTCATAGTATAAGGTATGGTATAACTCTGTAG
GGAATGCGTGGAAGGCCCTATTTGATTTAGCTGGAGGTTTGATACGGGAGTACGATCAAGAAGCTATGGTATCTGTAAGC
AAATTTGTCGATCAGTTACCATCAGTAATGAATCAGGTATTATATTTATATATGAATCTAAATTATATTTCATTAATAAA
ATGTGCTCTGACAACATGTTTGTCCATAGATATCTTTTT-ATCCTGAACATACATTCTTCCCATGTTATTTACAGGTTAC
AGAAGGTGTATCTGAATTCAAACCAACACCACCTGAGAACCGTGAATTCTGCAAGAATTCTTACAGTGTAGCTAATACAT
TATTGGTACTGTTGAGAAACTTGCACTTACTTAAGCAAACCTCTTTCCGTTCTAATTTAGCATTCGTTAATGCTCCATGT
ATGTATTGTAGGTGAAATTCAGCGTTGATGCTATTGATGATACAGACATAATTGAGGACATCTTGAGACCCCGGGTAGAC
TCAATTGGTGGACAAATAAAGAAGGTCGTACTGTCAGGAACACATCTAACTCCGTGTATACAGGTACAGCTAGTCATATT
TTTCATCTTCAAAT------------------------------------------------------------------
--------------------------------------------------------------------------------
GGAATTCTCGTAATCACTAGATCATGTTGAAGACCACTCC----------------------------------------
----CTGTTAATATGTGTAATACCATGGGAGGGCTGTTTTGGTTCTGGGGAGCATATGCCCCTGAATGAACAGTAAATTC
AAAAGAAATAGTAAAACAATTTAAAAAGTCAGATTTTTTTTTGGTATATGTTCATGTTAGTGTAACAAGCGTGTG--ACA
ATTTTCATACGAAACGGGATAGCAGTACAACAACAACAAAGCCTTTAGTCCCAAACAAGTTGGGGTAGGCTAGAGGTGAA
ACCCATAGATCTCGCGACCAACTCATGGCTCTGGCACATGGATAGCAAAGCTTCCACGCCCCCTGTCCATAGCTAGTTCT
TGGTGATACTCCAATCCTTCAGGTCTCTCTTAACGGACTCCTCCCATGTCAAATTCGGTCTACCCCGACCTCTCTTGACA
TTCTCCGCACGCTTTAGCCGTCCGCTATGCACTGGAGCTTCTGGAGGCCTGCGCTGAATATGCCCAAACCATCTCACAGA
CAATGTTGGACAAGCTTCTCTTCAATTGGTGCTACCCCAACTCTATCTCGTATATCATCATTCCGGACTCGATCCTTCTT
CATGTGGGCACACATCTATCTCAACATACGCATCTCCACCACACCTAACTGTTGAACATAACTGTTGAACATGTCGCCTT
TTAGTCGGCCTGAAACGGGATAGCAGTGCCTCCTGAAAAATAACAAAATGAAGTGTAATATTTGGTGTTCAGCTTGTTTT
TTTTTCTGCACAGGCCAAAAGGCTAAAGCATTCCACATAAAAATTTGCAGAATTAGGATGTGACCATGAACACTTCTTTT
TATTTTATTTTTATATATATACAAAAAAAACATTTTTTGGCGCGTGCGGGAGCATGTGCTCCTGGGAGCCGAATTGGATT
TCCACATTTAATGTGTACAACATTAATATTCATGTGTG------CCAGGCACTAACTATAGCTATACTACAGGATGTTAA
ATGGCAGGTTGGTTCAGAATACACTCCAGCGGATGCTCTGGCGCAGGGCTTAAAGTCATTGGCTCTCAATGAGACTAGGG
TCCTCTCAAGAACTATCGTTGACTACTTCAGATCCCTTTAGAAGCCTAGATTATAATTTATTCTATGTCCATTGAAGTTC
AGAATGCTGCTTATGAAGGTATGTGATACTACTGAATCTTTGTGTAACATCTGTGGTGTAAAAACCTAGGACCATGGCTT
GCATTAATCGTACATTTATTTACCACATTGGATATGCTTTTACACACA---GAGCCAGAACGGCAGAAATATCT----GT
AGAATCTATAGTG----CTATACAGTCTTCATTCAGTTTCATCACAAACATTTTTGCTGGTTGCCGCTTTCCTGATGCAG
TTGGCTGGGGTGTTGGGGGGTTGCCACTACAAGGACACACCGGAGTAAATATTATAGCACCTATACGACTCTGAAGAGCG
ATGTATTTGGACCGAGTTGAGTACGTTGGCACCGGCAGGCCGTACCACCACTATATGGTCTGATCAAGATTTGGAGGTTG
GGACCAAGCTGTTGGACTCTAGTCAGGCTATACACTGCATTTAACCCGAAATCCAAGAGAACAACGATCCATTCTCAGGT
ATGGCACCAGCGACGCTGAGTTGGTCGTATACACCTTCCAGCAGGCAGGCAGGCAAGC-------------TGTCCATGC
ACGGCCTTCTTCTGGTTGGCATTTTACGTGTAATACGACAATGCATACAT---CATCATACGTAGATTGCCATGTTATAT
ATTCTGTATAATAGTAACATCTGGGACAGTATTGTGTACATGTTTGAGAATGCTACAAGCGCAAGAGCTGTGGGTTA-TT
GGTCATGAATTTCACGGGTTGGGTTG-AAGCTCGGTAAGAAGTACCGTGCCCAGTTCTAGAGAAAGTTAGCCAGTTCAGA
TAATAGCCATTGTTTCTTTTCTTGTGGCTTGAATGGCGGGTGAAAAAGAGCAGCCGACGCATGGATCGACACAAGTCCAC
GTCCACTCGCGCGGCTTGAAAAGAAAGAAAAATATCCATGGGGTACGGACGCACTGGGTGAGCCCAGTTGACCGTTGTCT
GCGCATG----GCAACTTGTACGCGGCGCGGACGGCTGGACGAC
>SNPs
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----------------S---------------------------------------------------------------
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--------------------------S-----------------------------------------------------
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------------------------------------------------------------S-------------------
--------------------------------------------------------------S-----------------
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----------------------------------S---------------------------------------------
----------------------------------------S---------------------------------------
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--------------------------------------------------------S-----------------------
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----------------------------------------------------------------S---------------
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--------------------------------------------------------------------S-----------
------------------------------------SS------------------------------------------
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-S------------------------------------------------------------------------------
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>forward_1147
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---------GCTTGCTGGTTGCCACTG-----------------------------------------------------
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>reverse_3397
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------------------------------------CCCCAGGCACTAACTATAGCT-----------------------
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>forward_3349
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---------------------------------------------------GCATGTGCTCCTGGGAGA-----------
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>reverse_4242
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-GTCTGTATAATAGTAACATTTGGGACA----------------------------------------------------
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--------------------------------------------
