>input_sequence_43459
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---------------------------------------------------------------------ATGGCGACGCT
GCAGCTGAACCACATCGCGCGGGAGACCGGCGACGTGCGCGGCCTCGCCGCCTTCTACGAGGAGGTGCTGGGCTTCGAGC
GCGTCCCGTCCCCGGCCTACTCCGGCTTCCAGGTCGCCTGGCTCCGCCTCCCGGGCTCCCCCGACGTCGCGCTCCACATC
ATCGAGCGGGACCCGGCCGTCGCCGCCGCC---GCCCCGGGGGCCGCGCAGGGGGGCGCCACGCCCGCGCAGCTGCCCAG
GCGGCACCACCTGGCCTTCTCCGTGGCCGACTTCGACGGGTTCCTCACCGTGCTCAGGACCCGCGGCACCGAGCTGTTCG
AGAAGTCCCAGCCCGACGGCCGCACGCGCCAGGTCTTCTTCTTGGACCCCGACGGTGAGTGAGGGACC----CCTACCTT
CTC---CGATGCTTGCTAAATTCAACTTTTCTAGTATCTCGACGACGTCTCTGTTGCTTGATCTATGCTTGCTCACTGTG
CCATTTGCGTAATGTGTCTAATTGACGAAATTCTGAGAGAGATTCTTTAGTAGTAGAACTGCAAAACA-GTCTGCAA-TT
TAGGAGTGGCTTGAAACGGGAGGGTTATTCAGGTTGAATGATGGAGGAATGCCA--GCCTGAACCTTGTTTGCTTCATCA
CAATCCATCACCTGTGCTGTTTGTGAACTTGCAGTGTCCTTGCGGTGATCTT---CTTCAGGCAAATATCAGAGCTGTTG
GGTTTATGCATGTTTATG----TCCTTA-GGATAACTTATGATAGGTAGTA--C-TAGTGATGTTGGCTTATCATGTC-A
AGTTCTTGAAACGGGGCTAGTTCAGATATG--------------------------------TTTCTTATATACTGCTAT
TCAGTATGTGTGTTGCATGCTTGATTATGACCAGATCGGTCAGTTTGTAGTGCGATACTTGTTTGGTAAATGCTTTTGTT
TCACTTTTCTAGTTGGGTTATGCTAAGCCGTCCTCCAAAAAGAAAAAGAAAAAGAAGGTTATCCTCTAA-----------
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-------------TAGGGCTCTGAAAACGAGTTTTACGCTATCGGTTCCAGCCAATTGATAGGAACTACAT-ATCTTTAC
CATAAATACATGGCAAGCCATCCTTTAGGTTGA---TGATACATCTTAGCCAGAGGCAGACTGTATTTGCTTGTTCGTAA
GTAGTGCTGCAATTGTATGTTTCCAACAGGAGACTGAAATTGGTAATTCGTTGTCCATAACTTTTTTTTTTGACTGGATT
CGTTGTCCATAACTAGCTAGGGATTACTTTATCA----------------------------------------------
--------------------------------------------------------------------------------
-----------TGTGTTTAGGCTGCAGAGATAAAGTTGTGTGTTCTGGTTAGCAAAGCTGATTACGAGCCGACTGTCTGA
TACCTTTAAGCTTTCCAAACCTATGGGCTGTATATAATGGATTCTATCGATTGCTTTGCATATCGGACCATTCTTCCTAG
TATCTAGTATGCCTAGATTTCCTTTTCCTTTTAACTTGGGACTGGT----------------------------------
--------------------------CTGTGAATCTTGTCGTACGCACTATCAAGTGTAATTGTAATACAAAACGAAAGA
TGGCATCTGTCATGACTAATACCACGCTTTTAGATGCCAAATCCGAAGTTTATGAATTGTTACTCAGTCTGCAGTGAATT
TCCTGTGTACTAGTAACGCTTTGTAATTCTGATATCTGAAACAAGAATTGTGAATTGACAAATGGACTGCATTTTCATCT
GTCTTTTCATGCTCGCTGCGTATAATC---TGTACTGCAGTCCATTCCAACAACATCCACACCTCAACCATCATTGACAG
CTTGGTTCTGCCTCTACCGCAGGCAATGGTCTAGAAGTCACAAGCTCGAGCCCAGGCGATAAGTAA--------------
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>chr4A_1_TraesCS4A01G297800
CAGCGAGGTTTGTTTTTGATGAACCATCATTGTCTTTTTGGTACTATCGAATTTTTTTTCTACGTCCATTTATGACTTAG
TGGAGATCCGCGACGTCGAGGATGACATTTCTTTGCTTTAATTGTGTCAGATTTTTGCTATTACCGGCGACGTGTTTCGC
TACATCCATTCACGACGGCCATGGTGCTTTACAACTTAGCTTCGACCGGCGACAGCAAGGACGACATTTTTGCTGCAACT
GCGCCGATGTTTTTTGCTACTACCGGCGACCTGTTTGCTACATCCACTAACGACAGATATGGTGCTTCAAGCGCGGCGGC
GAGCGCGAACAAGATGCTGGTGGTGGGTCGCCAAATATTCCGGCGACAAGATCTGGANNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCGCACTCGATGAGCCGCAGGTGC
TGCGCAAGAGAAGACGACGGGTGTTGCGCAAGGGAGAAGAAG-ATTTGAAGACAAATCATTTTT----TCTAGATCCAAC
GCACCGGACCACTTACATCTAACGGCCTGAGCGGTCGCCCGTTTGGTTTTTTGGGCCGATCGGCCGGTGCCTATCACTGT
GTCACGGGCCTAACACTGCACGTGTTTATTGACTGTTT-GTAAGGCTGGTCTGGTGAACCAAATTCCCCTTCTCCTCCTC
CTG----TCCTGCGGGTGACACGTGTGCGGCGCGCGAGGAGCCACGCAGCACGCGTGGCCGGCCGCGCGGCACGTTTTCT
TGCCCCGTTCGCCGGCCGCTCCGCCCACTCCCA-------------------CTCCCCGGACCGAGCCGATGGCGACGCT
GCAGCTGAACCACATCGCGCGGGAGACCGGCGACGTGCGCGGCCTCGCCGCCTTCTACGAGGAGGTGCTGGGCTTCGAGC
GCGTCCCGTCCCCGGCCTACTCCGGCTTCCAGGTCGCCTGGCTCCGCCTCCCGGGCTCCCCCGACGTCGCGCTCCACATC
ATCGAGCGGGACCCGGCCGTCGCCGCCGCC---GCCCCGGGGGCCGCGCAGGGGGGCGCCACGCCCGCGCAGCTGCCCAG
GCGGCACCACCTGGCCTTCTCCGTGGCCGACTTCGACGGGTTCCTCACCGTGCTCAGGACCCGCGGCACCGAGCTGTTCG
AGAAGTCCCAGCCCGACGGCCGCACGCGCCAGGTCTTCTTCTTGGACCCCGACGGTGAGTGAGGGACC----CCTACCTT
CTC---CGATGCTTGCTAAATTCAACTTTTCTAGTATCTCGACGACGTCTCTGTTGCTTGATCTATGCTTGCTCACTGTG
CCATTTGCGTAATGTGTCTAATTGACGAAATTCTGAGAGAGATTCTTTAGTAGTAGAACTGCAAAACA-GTCTGCAA-TT
TAGGAGTGGCTTGAAACGGGAGGGTTATTCAGGTTGAATGATGGAGGAATGCCA--GCCTGAACCTTGTTTGCTTCATCA
CAATCCATCACCTGTGCTGTTTGTGAACTTGCAGTGTCCTTGCGGTGATCTT---CTTCAGGCAAATATCAGAGCTGTTG
GGTTTATGCATGTTTATG----TCCTTA-GGATAACTTATGATAGGTAGTA--C-TAGTGATGTTGGCTTATCATGTC-A
AGTTCTTGAAACGGGGCTAGTTCAGATATG--------------------------------TTTCTTATATACTGCTAT
TCAGTATGTGTGTTGCATGCTTGATTATGACCAGATCGGTCAGTTTGTAGTGCGATACTTGTTTGGTAAATGCTTTTGTT
TCACTTTTCTAGTTGGGTTATGCTAAGCCGTCCTCCAAAAAGAAAAAGAAAAAGAAGGTTATCCTCTAA-----------
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-------------TAGGGCTCTGAAAACGAGTTTTACGCTATCGGTTCCAGCCAATTGATAGGAACTACAT-ATCTTTAC
CATAAATACATGGCAAGCCATCCTTTAGGTTGA---TGATACATCTTAGCCAGAGGCAGACTGTATTTGCTTGTTCGTAA
GTAGTGCTGCAATTGTATGTTTCCAACAGGAGACTGAAATTGGTAATTCGTTGTCCATAACTTTTTTTTTTGACTGGATT
CGTTGTCCATAACTAGCTAGGGATTACTTTATCA----------------------------------------------
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-----------TGTGTTTAGGCTGCAGAGATAAAGTTGTGTGTTCTGGTTAGCAAAGCTGATTACGAGCCGACTGTCTGA
TACCTTTAAGCTTTCCAAACCTATGGGCTGTATATAATGGATTCTATCGATTGCTTTGCATATCGGACCATTCTTCCTAG
TATCTAGTATGCCTAGATTTCCTTTTCCTTTTAACTTGGGACTGGT----------------------------------
--------------------------CTGTGAATCTTGTCGTACGCACTATCAAGTGTAATTGTAATACAAAACGAAAGA
TGGCATCTGTCATGACTAATACCACGCTTTTAGATGCCAAATCCGAAGTTTATGAATTGTTACTCAGTCTGCAGTGAATT
TCCTGTGTACTAGTAACGCTTTGTAATTCTGATATCTGAAACAAGAATTGTGAATTGACAAATGGACTGCATTTTCATCT
GTCTTTTCATGCTCGCTGCGTATAATC---TGTACTGCAGTCCATTCCAACAACATCCACACCTCAACCATCATTGACAG
CTTGGTTCTGCCTCTACCGCAGGCAATGGTCTAGAAGTCACAAGCTCGAGCCCAGGCGATAAGTAACCTGCTGGGAGCAG
GAAACACCTTCTACTTCTGCGACACCCATGTAAGTGGTAACTGATGTTGCAGTTGAGAATCCATTGCAAGCTGTGCCGGC
GCCTACCATTTCCGAAACCAATTTCCCGAGCTTAAATTGCATCGGCGGTTTTTCGCAGCTGCCACGGCAAAC-AAGCAGG
GAGCAGTTAGGCTGCTATGCTATGCTGAAGTGCTGTCAGTTTTTCTTTCTTGCACATGAGTACCG-GTTACACTGATCCA
CATTATCTATTTTGCTTGTTTGGTTGCAGGTAGTGATG-CCCACCTCGAGACTGAAGATGATGGAAGCTGCAGAATTTGA
GGGAAAACATCCAGTGCCATGCGTTACTCCGAAATAAATAAGGACCTTACTACTTATATCTATC----TGCTCCCCATGC
TTGTAATCTGGATATGCATGTCTCTGGCTCAAG-ACTGAACTTGTGCTGTGTGTTAGAACATCAAGTTAAACTAGTACTC
CCTCCGTCCGGAAATACTTGTCGAAGAAATGGGTAAAAATGGATGTATCTAAAACTAAAACGCGTCTAGATACATCCATT
TCTCTAACAAGTATTTCCGGACGGAGGGAGTACTACAAATGATGTGCTTCTTGCCCATCAAATCTTTCGATTCG---CCT
TCATATGAAATCTTTCGA--------------------------TTCGCTGATGTTCCGGTTATCGCTGAACCAATGTTT
CAAGCATAACAAGCAGGAACG--CAAAGATTGTTCAGGCAACAACTGAAGCAACTGATTAT--TAGGCAAAAAAAAAGGG
CATCTTATTGTAATGGCTGGTGAAATACATTGTACAGAGCCTCGGAGCACATGAACTCTGCCGATCGACGCCGCGCGAGG
TGGCCGCCGGCCGGCCGGCGTGAGGCGAT-----GAGGGGTCGGTCAGTCGTTGGCGGTGGCGAGCTGGACCTGGAGCAG
CTCGTCCTCGGGGATGACGCGGATGGTGCAGTCGGAGCGCGGGTAGGCGGCGCAGAGCAGCGCGTAGCCCTG
>chr4D_615
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------------------------------------------------------GTGCGCACCCGATGAGCTGCAGGTGT
TACGCGAGAGAAGACGGCGGGTGTTGCGCGAGAAAGAAGAAAAATATGGAGGCGAATCATTTTTTTTCTCTAGATCCAAC
GGATCAGACCACTCGCATCTAACGGCC-GAGCGGTCGCCCGCCTGGTTTTTTT-GCCGATCGGCCGACGCCTATCACTGT
ATCACTGGCTTAACACTGCACGTGTTTGTTGTCTGTTTTGTAAGGCCGGTCTGGTAAACCAAATTCCCCTTCTCCTCCTC
CTCCCCCTCCTGTGGGTGACACGTGTGCGGCGCACGAGAAGCCACGCAGCACACGTGTCCGGCCACACGGCACGTTTTCT
TGCCCAGTTCCCCGGCCGCTCCGCCCACTCCCGACTCCCACTCCCACTCCCCCTCCCCGGACGGAGCCGATGGCGACGCT
GCAGCTGAACCACATCGCGCGGGAGACCGGCGACGTGCGGGGCCTGGCCGCCTTCTACGAGGAGGTGCTGGGCTTCGAGC
GCGTCCCGGCCCCGGCCTACTCCGGCTTCCAGGTCGCCTGGCTCCGCCTCCCGGGCTCCCCCGACGTCGCGCTCCACATC
ATCGAGCGCGACCCGGCCGTCGCCGTCGCCGTTGCCCCGGGGGCCGCGCAGGGGGTCGGCACGCCCGCGCAGCTGCCCAG
GCGGCACCACCTCGCCTTCTCCGTGGCCGACTTCGACGGGTTCCTCACCGGGCTCAGGACCCGCGGCACCCAGCTGTTCG
AGAAGTCCCAGCCCGACGGCCGCACGCGCCAGGTCTTCTTCTTCGACCCCGACGGTGAGCGAGCGAGGGATTCCC----T
ATTTATGGTTCCCATTTTCTCACCATCCTTTTAGATTTTCTACTGGAATTGCCGTGGCATTTGAGTGA------------
---------TATTGTGTCGATTTGACGAAATTGTGAGAGAGATTCTTAAGTAGGAGAACTAGAAAACAAGTTTGCAATTT
TAGGAGTGGCTTGAAATGGGAGGGTTATTCAGGTTGGGTGATGGAGGAATGCCACAGCCTGAAACTTGTTTGCTTCATCA
CAATCTGTCATCCGTGCTATTTGTGAACTTGCAGTGTGCTTGTGGTGATCTTCTTCTTCAGGCAAAGATCAGAGTTGTTG
GGTTTATGCATGTTTTGTGTCCTCCATA-GGATAACTTATGATAGGCAGTA--C-TAGTGATGTTAGCTTATCATGTC-A
AGTTCTTGGAACGGGGTTAGTTCAGCTATGCATTTTATTTCTGCAGCATATATGTACAAAATTTTCCTGTAGACTGCCGT
TCAGTATGTGTGTTGCATACTTCATTATGACCAGATCGATCAGTTTGTAGTACGGTACTTGTTTGGTAAATTCTTTTGTT
TCACTTTTTAGTATCCTGAACCTACCAACCACTAATTCTGTTCCTAAATGTATGACGTTTTTGCCTTCAAATTGAA----
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------------------CTGCAAAAGCATCTTACATTTAAGAACAGAGGGTGTATGT----------------------
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---------------------------------------------------------TGTATAGTTAGACGTATTGGTAT
TTCATTAGCCTTAGTATGTT------------------CTATCAGTTCCAGCAAATTGATAAAAACTACAGAACATTAAA
CATTAATAGATAGCTAGCCATCC---AGGTTGA---TGATAAATTGTAGCCAGAGGCAGACTGGGTTTGTTTAATCGTAA
TTAGTGCTGCAATTATATGCTTCCAACAGTAGAGTGAAAATTAGTAAA-------------------------------T
CGTTGTCCATAACTAGCTAGGGC--ACTTTATCA----------------------------------------------
--------------------------------------------------------------------------------
-----------CGTGTTTAGGCTCCAAATATAAAGTTGTGTGTTCTGGTTAGCAAAGCTGATTATGAGCCGACTGTCTGA
TACCTATAAGCTTTATGGGCTA--------TATATAATGGATTCTGTCGATTGCTTTGCATATCGGACCAATCTTCA---
----TAGTATGCCTAGATTTCCTTTTCCTTTTAACTTGTGACTGGT----------------------------------
--------------------------CTGTGAATCTTGTCGTACGCACTATCGAGTGTAATTGTAATACAAACCCAAAGA
TGTCATCTGTCATGACTACCATCATTCTTTTAGATTTCAATCCAGAGGTTTATGCATGGT---------TGCAGTGAATT
TCCTGTGTGTTAGTAACGCTTTAGAATTCTGGTATCTGAAACAAAGATTGTGAAT-AACAAATGGAGTGCATTTTCATCT
GTCTTTTCATGTTTATTGCAATATAATCTTTGTACTGCAGTCCATTCCTACTACATCCACACCTCAACCATCACTGACAG
CTTGGTTCTACCTCTACTGCAGGCAATGGTCTAGAAGTTACAAGCTCGAGCCCAGGCGATAAGTAACCTGCTGGGAGCAG
GAAACACCTTCTACTTCTGCGACACCCATGTAAGTAGTAACTGATGTTGCAGTTGAAAATCCATTGCAGGCTGTGCCGGC
ACCTACCATTTCCGAAATGAATTTCCCGAGCTTAAATTGTACCGACGGTTTTCTGCCGCCGCTGCGGCAAACTAAGCAGG
GAGCAGCTAGGCTGCTATGCT-----GAAGCACTGTCAGTTTTTCTTTCTGCATC-TGAGTACTG-GTTACACTGATCCA
ACAA----ATTTTGCTTGCTTGGTTGCAGGCAGTGATG-CCCACCTCGAGGCTGAAGATGATGGAAGCTGCAGAATCTGA
GAGAAAACATCCGGTGCCATGCGTTACTCCCAAATAAATAATGACCTTGGTACCTATATCTATC----TGCTCCCCATGC
CTGTAATATGGATATGCATGTCTGAGACTCAAGTACTGAACCTGTGCTGTGTGTTAGAACATCAAGTTAAATTAGTAC--
--------------------------------------------------------------------------------
------------------------------TACCACAAATGATGTGCC-CTTGCTCATCAAATCTTTCGATTCGTCGCCT
TCACATGAAATCTTTCGA--------------------------TTCGCTAATGTTCCGGTTATCGCCGAATCAATGTTT
CAAGCATGACAAGCAGGAATGTTTGAAGATTGTTCAGGCAACAGCTGAAGCAACTGATTAT--TAGGC-AAAAAAAGAAA
CATCTTATTGCAATGGCTGGTGAAATACATTGTACAAAGCCTCGGAGCACATGAACTCTGCCGATCGACGCCGCGCGAGG
T-----------GGCCGGCGTGGGAAGATGAGGGGAGGGGTCGGTCAGTCGTTGGCGGTGGCGAGCTGGACCTGGAGCAG
CTCGTCCTCGGGGATGACGCGGATGGTGCAGTCGGAGCGCGGGTAGGCGGCGCAGAGCAGCGCGTAGCCCTG
>chr4B_893
GTGTGCTGGCCTCG------------------------------------------------------------------
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---------------------------------GCGAGAAGCCACTCAAGCACACGTCGCCGCCGCACGGCACGTTTTCT
CCCCGCCTTCCCCGGCCGCGCCGCCCACTCCCGACTCCCACTTCCC-------------GACGGAGCCGATGGCGACGCT
GCAGCTGAACCACATCGCGCGGGAGACCGGCGACGTGCGGGGCCTGGCCGCCTTCTACGAGGAGGTGCTGGGCTTCGAGC
GCGTCCCGGCGCCCGCCTACTCCGGCTTCCAGGTCGCCTGGCTCCGCCTCCCGGGCTCCCCCGACGTCGCGCTCCACATC
ATCGAGCGCGACCCGGCCGCCGCC---------GCCGCCGCTGCCGCCCCGGGGGACGCCACGCCCGCGCAGCTGCCCAG
GCGGCACCACCTCGCCTTCTCCGTGGCCGACTTCGACGGGTTCCTCACCGGGCTCAGGACCCGCGGCACCCAGCTGTTCG
AGAAGTCCCAGCCCGACGGCCGCACGCGCCAGGTCTTCTTCTTCGACCCCGACGGTGAGCGAGCGAGCGATTCCC----T
CTC---GGATCCTGTTTCCTCACCATCCTCTTAGATTTCC-ACTGGAATTGCCGTGGCGTTTGAGTAA------------
---------TATTGTGTCGAATTGACGAAATTCTGAGAGAGATTCTTCAGTAGGAGAACTGGAAAACAAGTCTGCAATTT
TAGGAGTGGCTTGAAATGGGAGGGTTATTCAGGTTGAGTGATGGAGGAATGCCACAGCCTGAAACTTGTTTGCTTCATCG
CAATCCGTCACCGGTGCTATCTGTGAACTTGCAGTGTCCTTGTGGTGAACTTCTTCTTCAGGCAAAGATCAGAGTTGTTG
GGTTTATGCATGTTTTATGCCCTCTTTA-CGATAACTTTTGACAGGTAGTAGTAGTAGTGATGTTAGCTTATCATGTCTG
TCT--TTGGGACGGGGTTAGTTCAGCTATGCATTTTATTTCTGCAGCATACATGTACAGT-TTTTCTTGTAGACTGCCAT
TCAATATGTGTGTTGCATGCTTCATTATGACCAGATCGATCAGTTTGTAGTACGATACTTGTTTGGTAGATGCTTTTGTT
TAACCTTTTTTGTTGGGTTATGCTAAGCTGTCCTCCAAAAAGGAAAAAAGTTTATCCGACGGTGAGGGATTCCTTCCTTC
TCGGATGCTTATTTATCTTTGTTGGATTCCTATGTTTTTAGATTCCTAATTGTTAATTTAGCTTGCTATCTCGGTGACGT
CTCTATGCTTGTTAATTGGTAATTGAAGGAAAGATGAGATAAGTTATGGCAATGGTTACATCATAATTTTGGCAGTACCG
TCTATTTTTTAGCGGACTTCAGCTTGACGCAAGTTGCCAAGTTTTACCTTGCAGTAGTAGGGAGAACACACTATAGGTAG
TTTGAACATCCCATTGTTTACAATCTTGGGATCACCTTTATTTTTTTTGGAAAAGGGGCGTAGCCCCGGCCTCTGCATCA
ATCTTGGGATCACCTAGGCTGCATAAGCATTTTAGTACTCTGTAGTAGAACTACAAAACGTACTGCAGTTTAGGCGTGGC
TTGAAATGGGAGGGTTGACCCTCTTTTTGGAAATGGTCACCCCCGTATTTCAAATTGTGTGTTCGTTACAAAATCCACTA
CCTGTGCTATTTGTGAACTTGCAGTGTCCTTGTGGTGATTTCTTCTTCAGGCAAAGATCAGAGTTTGTTGTGTTTATGCA
CATTTTGTGTCCTTAGGGTAGGGGTTACTTTTGATAGGTGGTACTAATGATGTTAGCTTATCATGTCAAGTTTCTTGAAC
GGGGTTACTTCAGATATGCATTTTCTTTCTGCAGCATGTATTGTATATAGAATCTTTCTTGTTGACTGTCATTCAATATG
TGTACTGCATGCTTGATTATGACCAGATTGTTCAGTTTGCAGTAAGATAGTTGTTTGGCAAATGATTTTTGTTTCACTTC
TTAGTTTGGTTATGCTAAGTCTTTCTCGAAAAGAAAATGGTTATGCTAAACCTACTATGTTTAGTTAGACCTGTATTCCA
CAAGTCTTATAAGTAGGGCTCTGAAAACGAGTTCTACACTGTCAGTTCCAGCATA-TTATAGAAATTATAT-ACCATTAA
CATCAATAGACAGCAAACAAGCC---ATCCTTAAGTTGATAAATCTTAGCCAGCAACAGACTTGATTTGCTTTCTTCGAA
GTAGTGCTGGAGCTATATGTTTCCAACAGTAGAGTCAAAGCG-GTAAA-------------------------------T
CCTTGTCCATAACAAGGACTTACTTGGTACTCCCTCTGTAAAGAAATATAAGAGTGTTTAGATTACTACTTTAGTGATCT
AAACTAGTGATCTAAACGCTCTTATATTTCTTTACAGAGGGAGTACCAAGTTGCATGAAGTCATTTTACCAAGCCGCCTG
TCACTTAATCTCGCGTCTACCCTCCAAAGATAAAGCTGCGTGTCCTGGTTAACCAAAAAGATCATGAGCCAACTACCTGA
TACCTATGTACTTTCCAAAGCCATGGGC----TATAATGGATTCCATTGGTTGCTTTCAA------ACCATTCTTCATGG
TATG--------CTAGTTTTTCTTCTCCTTGTAACTTGTGACTGGTCTTAAACGCAAAAAAAAAAAGAAAAAAGAAAAAA
GAGAAAAAAAGAAACTTGTGACTGGTCTGTGAATCTTGCCGTACCCACTTTCGAGTGTAATTGTAAG--AAACCCAAAGA
TGGCACCTGTCATGGCTAATACCAAGCTTTTAGATTTCTGTTCAGAAGTTTACGCATGGTTCCTCAGTCAGCGGTGAATT
TCCTGTGTGTTACTAACTCTTTGGAATTCTGATATCTGAAACAAAGATTGTGAAT-GACAAATGGACTGCATCTTCATCT
GTCTTTTCGTGTTTATTGCA-TACAATCTTTGTACCGCAGTCCATTCCAACAGCATCCACACCTCAACCATCGTTGACAG
CTTGGTTCTACCTCTACCGCAGGCAATGGTCTAGAAGTCACAAGCTCGAGCCCAGGCGACAAGTAACGTGCCGCGAGCAC
GAAACACCTTCTACTTCTGCGACACCCATGTAAGTAGCAACTGATGTTGCAGTTGAAAACCCATCGCAAGCTGTGCCCGC
GCCTACCGTTTCCGAAATGAATTCCCCGAGCTTAAATTGCACCGGCGGTTTTCCGCCGCCGCTGCGGCAAACTAAGCAGG
GAGCTGCTAGGCTGTTATGCT-----GAAGCACTGTCAGTTTTTCTTTCTGCATG-TGAGTACTGGGTTACACTGATCCA
ACAA----ATTTTGCTTGCTTGGTTGCAGGTAGTGATTACCCACCTCGAGGCTGAAGATGATGGAAGCTGCAT-ATCTGA
GAGAAAACATCCAGTGCCATGCTCTACTCCCAAATAAATAATGACCTTGCTACCTATATCTATCTATATGCTCCCCATGC
CTGTAATCTGGATATGCATGTCTGAGACTGAAT--CTGAACTCGTGCTGTGTGTTACAACATCAAGTTAAATTAGTAC--
--------------------------------------------------------------------------------
-----------------------------GTATCACAAATGATGTGCT-CTCGCCCATCAAATCTTTCGATTCG---CCT
TCACATCAAATCTGTCGATTCGCCTTCGCATGAAATCTTTCGATTTCGCTGATGTTCGGGTTATCGCCGAACCAATGTTT
CAAGCATGACAAGCAGGAATGTTCACAGATTGTTCAGGCAACAACTGAAGCAGCTGATTATATTAGGC-AAAAAAAAGCA
TCTCTTATTGCAATGGCTTGTGAGATACATTGTACAAAGCCTTGGAGCACATGAAC------------------------
--GCCGGCGGCCGGCCGGCGTGAGGGGTGGG-----------GGTCAGTCGTTGGCGGTGGCGAGCTGGACCCGGAGCAG
CTCGTCCTCGGGGATGACGCGGATGGTGCAGTCGGAGCGCGGGTAGGCGGCGCAGAGCAGCGCGTAGCCCTG
>chr3B_975
CCACTC--------------------------------------------------------------------------
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-----------------------------CCGA-------------------CTTCCCTGACTGGACCGATGGTGACACT
GCAGCTAAACCACATCGCGTGGGACACCGGCGACGTGCAGGGCCTGGCCGCTTTCTACGAGGAGGTGCTGGGCTTCGAGC
GTGTCCCGGCGCCCACCTACTCCGGCTTCCAGGTCGCCTGGCTCCGCCTCCCGGGCTCCCCCGACGTCGTGCTCCACATC
ATCGAGCGCGACCCGGCCGTCGCC---------GCCCCGGGGGCCGCGCAGGGGGTCGTCGCGCCCGCGCAGCTGCCCCG
GCGGCACCACCTCGCCTTCTCCGTGGCCGAGTTCGACGGGTTCATCATCGTGCTCAGGACCCGTGACACCCAGCTGTTCG
AGAAGTCCCAGCCCGACGGCCGCACGCGCCAGGTCTTCTTCTTCGACCCCGACGGTGAGTGAGCGATC----CCC----T
CTC---CGATCCTGTTTTCTCACCATCCTTTTAGATTTCC-ACTCTAAGTGCCTTGGCATTTGAGTAA------------
---------TATTGTGTCGAATTGACGAAATTCTGAGAGAGATTCTTAAGTAGGAGAACTGGAAAACAAGTCTGTGATTT
TAGGAGTGGCTTGAAATGGGAGGGTTATTCAGGTTGGGTGATGGAGGAATGCCACAGCCTGAAACTTGTTTGCTTCATCC
CAATCTGTCACATGTGCTATTTGTGAACTTGCAGTGTGCTTGTGGTGAACTTTTTCTTCAGGCGAAGATCAGAGCTGTTG
GGTTTATGCATGTTTTCTGTCCTTAGTTGGGATAACTTATGATAGGTAGTATAC-TAGTGATGTTAGCTTATCATGTCTA
AGTTCTTGAGACGGGGTTAGTTCAGCTATG--------------------------------------------------
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>chr7B_975
CCACTC--------------------------------------------------------------------------
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-----------------------------CCAA-------------------CTTCCCTGACCGGACCGATGGCGACGTT
GCAGCTGAACCACATCGCGTGGGAGACCGGTGACATGCGAGGCCTGGTCGCCTTCTACGAGGAGGTGTTGGGCTTCGAGC
GCGTCCCAGCGCCCGCCTACTCCGGCTTCCAGGTCGCCTGGCTCCGCCTCCCAGGCTCCCCCGACGTCATGCTCCACATC
ATCAAGTGCGACCCAGGCGTTGCC---------GCCCTGGGGGCCGCGCAGGGGGTCGCCGCGCCCGCACAGCTGCCCTG
GCGGCACCACCTCGCCTTCTCCGTGGCCGACTTCGACGGGTTCCTCAGCGTGCTCAGGACCCGCGACACCTAGCTGTTCG
AGAAGTCCCAGCCCGATGGCTGCACGTGCCAGGTCTTCTTCTTCGATCCCGACGGTGAGTGAGCA----ATTCCC----T
CTC---GGATCCTGTTTTCTCACCATCCTTTTAGATTTCC-ACTGTAAGTGCCTTGGCATTTGAGTAA------------
---------TATTGTGTCGAATTGACGAAATTCTGAGAGAGATTCTTAAGTAGGAGAACTGGAACACAAGTCTGCAATTT
TAGGAGAGGCTTGAAATGGGAGGGTTATTCAGGTTG--------------------------------------------
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------------------------------------------------------------------------
>SNPs
-S---SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------S--------S-------S
-S---S----------S------------S--SS-------S---S--S--S-S--------------------------
-S-S-S-------SS------------S-------------SS---------SS------------SS------------
S----S---S-----------------S---S--------------S--------S------------------------
--S---------S-------------------------S-------------S----S--------S-------------
----------S---------------------------------------------------------------------
---------------------------------------S-----S----------------------------------
--------S-----------------------------------------------------------------------
--------S----------------S-----------------------------S------------------------
------------S---------------------------------------------------------S---------
-------------------------------------------S-------------------S--S-------SSSSS-
----------S--SSS-SSSSS-S-SSS--S---SS-S--S--SSSSSS-SSS---SSSSS-SSS--SSSSSSSSSSSSS
SSSSSSSSS--S------S----------------------------S-----S-------S------------------
----------------S--------------------S-------------------------S----------------
------S-----------S-----------------------S-----------------------S-------------
---------------SSS-----------------------------------------------S--------------
----------------S--------S------------------------------------------S--S-----S--
----------------------S---------------S------------S----------------------------
--------S-S-------------------------------S----S-SS-S--S----S-S-SS-S------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------S---S-----S--------S---------S----------S-----S
---S----S--S-----------SSS---------------S---------------------S--------SS------
--------------S--------------S---S-----S--SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-
----------------------S---------------------------------------------------------
--------------------------------------------------------------------------------
-----------S-----------S--S-------------------------------------S---------------
-----S---------------S------SS----------------------------------------------S-S-
---S----------------------------------S-----------------------------------------
----------------------------------------------------S-------------------S-S-----
------------------------S----------SS---S--S----------S--S---S------------------
--------SS-------------S--------------------SS---------S------------------------
-----------S-SSS---SSSSS-SS-----------------------------------------------------
---------S----------------------------------------------------------------------
-----------------------------------S--------------------S-----------------------
-----------------SS----------------------S----------S---S--S--SS----------------
------S--------------SSSSS----SS------------------SSSS-S-------S----------------
SSSSSSSS----------S-------------------------------S-------------------------S---
-S----------------------------S----------S------S----S--------------------------
S----------------------SS-S--------------------------------------------S------SS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S--------------S-------------------------------
---S---------------------------------------------------------------S------------
-------S-----------S------------------------------------------------S---------SS
----------S-------------------------S-------------------------------------------
-S----S------------------S------------------------------------------------------
------------------------------------------------------------------------
>forward_883
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------TTCCCCTTCTCCTCCTC
CTG-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>reverse_3425
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------CGAGCCGACTGTCTGA
TACC----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>forward_1528
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------TTGCTCACTGTG
CCATTTGC------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>reverse_4479
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------TC
CCTCCGTCCGGAAATACT--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
