>input_sequence_43455
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---------------------------------------------ATGGACTCCTCGCCGTCTGACCTAACCCTAGACTA
CACCCCCAACGGCAACGGCACGGCAGCTGCCGCCGCCGGCTACCCGAAGCAGGCGTCGCCGGTCGTGGACCACCACCATC
ATCTCTCGGCGGAGCAGGCGACGACGCAGAAGCTGCAGGAGTTCCTGGCCCGCCTCGACGACGAGCGGCTCAAGATCGAC
GCCTTCAAGCGCGAGCTCCCGCTCTGCATGCAGCTCCTCAACCAAGGTAATTAACGTGCCGAACTGCCCATGCATGTGTG
CTTACGTGGAAGGGTGATGGAGCTCTGCCTGACTGAATAATGCATGTGTGGGTG----CAGCTATGGAGGCCTACAGGCA
GCAGCTGGAGGCGTGCCAGATGGGGAGCCATGGCGGCGCGGCGGCGAGGGCGCCGCTGGTGCTGGAGGAGTTCATCCCGC
TGAAGAACATCGGGATCGACGCGGCGGAGAAGGCGGCCGGGAACGCGCCGTCGGAGAAGGCGAACTGGATGGTGTCGGCG
CAGCTGTGGAACGGGCCGGCTGCGGGGGACGCGGCGGCCAAGGGCCCCCAGACTCCCAAGGAGCGCTCGGAGCACCCGCT
CGACACGAGCCCCATGCTCGGCGGGCTCGACGGCGGCGGCGGCAACGGTGTCGGCGCCTTCCTCCCGTTCACCAAGGAGA
AGGCCTGTATGGCGGAGAGCGCGGCGCTGCCGGAGCTCGGGCTCGCGCCCGCGGAGAAGGACCGGGAGGCTGACAGAAAG
CCGTACCACGACGACGGCGGCAGCAACGGCACTGTAGTCTCGCGGAGAGACGTCGGTGCACCACCGACGTCGACGCCGCC
GGAAGGGCAGTCGGTGCCGCCAGCTCCGCAGACGAACCGGAAGGCCCGGCGGTGCTGGTCGCCGGAGCTGCACCGCCGCT
TCGTCAATGCCCTTCAAATCCTGGGCGGCGCTCAAGGTATG--CACACAGACGTCCACATG-------------------
-----------CATCAAATTAACCAGCTGAATCTGAACGAACTACATGTGTACCAAAG----ATTCTAAACCTCCTTTGT
TGTTTGCAAATTGATTAAAGTGGCGACCCCGAAGCAGATCCGAGAGCTGATGAAGGTGGATGGATTGACCAATGATGAGG
TGAAAAGCCATCTCCAGGTAATTATAATCTCATCATCACGCATCTTGCATTCTCTCTTCGTAGTACGTTCCAGTTATTAT
GCATGCTGCTGCTTTCATTATGATGAGTAGAATGATTAACTGATTATTATATGAACACATGAGACA----TGGGTGTGTA
TCTAATTTTTAGTTTTTG-----TTTGTGTTGCGAGCAGAAGTACAGGTTGCACACGCGGCGGCCGATGCCGGCACCGTC
GGCGCCGCCGCCGGGGGCACCGCAGCTGGTGGTTCTCGGGGGCATATGGATGCCGCCGGACTACGCGGCGCAGGGGGCGG
GACCGGCCGGCATCTATGGGGCGCACCCGGCAACGCAGGCGCACTACACGGCGGCAGTGTCGGCGCAGGAGTACTACCAG
AACGCAGCCGCGGCCGCCCACCACGGCCACCACATGCAGCACCACCAGGCGGCCTCCATGGTGCACCACCGCGCGGTGGC
ACCTCCGCCCCCGCAGCCCGCCTACAAGGTGCACCCGTTGTCCGCAGCAGGGTCCCAGGCGTCATCGGAGGGCCGGCGTA
GCAGCGGCGGCGGCAGGGAGAGGTCGGAGAGCATTGAGGAGGAGGGCGAGGAGCGGGAGGACGAGGAGGACGAGGACGAG
GACGGCATGGCGGCGAACGGCGACGCCGAGCAGATCAACTACTAA-----------------------------------
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>chr3A_1_TraesCS3A01G123700
AGCAGAGGATGGTGTGATTCCCGTCCCGGCTAGCTAGGTATATCTGGTGATTATCCCTTCGTGTGCGTGTCTGAAACCAT
TCAATATTGTTAATGGTAAAGGTGAAAAATATTCTTCAAGACACCTTGCTGGTTCTCTCTTGGACTTGCAAGGTTCTCTT
TGGACTACTTTGAGGAGGTCACCTTACACCTTTAATTCTTTTGAATCAGGAGCACCGAGAGAAGCTATGCTAACTTCCTG
TGGGTGATGGGTTGATTCCCTGCCGTAAAAACGATTGTAAAGTTT----AACCTAACACAAAAATGAGGCATCCATGTGA
AAAGATTGACCGGGGAAAATACATCG-TGTGGCGCTGGATGGGTGGCCAGACTTTCAGCATGACAAGACATAGCCAACAA
ACCAAAGGTTTCCAGATTTTCATGCATGCATGATGCCCAGAGATATTTG---------------ATGTATATGCTACTTT
CAAGGGCATACAAATATACCCCCGCAAAAAAAAGGGCATACAAATATATGCATATACCAGCTAGGTTCATTTGATCTTAC
AGTGGAG---------------------------------------------------AGACCAGAAACCACGTGACCCC
ATCTGTGTCAGGTGTGGTCGCCTTGCTAGTTGCTACGGGCTACGGCTATATCCTACTGCACCACCTTGCAGTACATGAAA
CCTCCTGCATGCATGCATATGCATGCAGAGGATTAGCTTTTGGCCCCTTTGATCTTTGCAAGAAGTTACCATGCCCTTGG
CTTTATCCCTCTAGTCTAGTCTGCAGGTCTGGTGGTCTACAGTGCCTAGATCAAAGTATCAAACACACACATACATACAG
GGAGAAACTTTTCCTTTTCACCCCCTCTAAATCCGACTTTATTCTCTCTTCCCTCCCAGAAATCACCCTTAAAAACAAGC
CGATTCCACCCCGATCCCCCCATCCACACACACA--------CACACCCCTTGATATCTAAGCAGGAGTAATATACTGGA
GCTTCCCTAGCACCTCACTA--GCTGCACCACTTCACAC----ACATGGACTCCTCGCCGTCTGACCTAACCCTAGACTA
CACCCCCAACGGCAACGGCACGGCAGCTGCCGCCGCCGGCTACCCGAAGCAGGCGTCGCCGGTCGTGGACCACCACCATC
ATCTCTCGGCGGAGCAGGCGACGACGCAGAAGCTGCAGGAGTTCCTGGCCCGCCTCGACGACGAGCGGCTCAAGATCGAC
GCCTTCAAGCGCGAGCTCCCGCTCTGCATGCAGCTCCTCAACCAAGGTAATTAACGTGCCGAACTGCCCATGCATGTGTG
CTTACGTGGAAGGGTGATGGAGCTCTGCCTGACTGAATAATGCATGTGTGGGTG----CAGCTATGGAGGCCTACAGGCA
GCAGCTGGAGGCGTGCCAGATGGGGAGCCATGGCGGCGCGGCGGCGAGGGCGCCGCTGGTGCTGGAGGAGTTCATCCCGC
TGAAGAACATCGGGATCGACGCGGCGGAGAAGGCGGCCGGGAACGCGCCGTCGGAGAAGGCGAACTGGATGGTGTCGGCG
CAGCTGTGGAACGGGCCGGCTGCGGGGGACGCGGCGGCCAAGGGCCCCCAGACTCCCAAGGAGCGCTCGGAGCACCCGCT
CGACACGAGCCCCATGCTCGGCGGGCTCGACGGCGGCGGCGGCAACGGTGTCGGCGCCTTCCTCCCGTTCACCAAGGAGA
AGGCCTGTATGGCGGAGAGCGCGGCGCTGCCGGAGCTCGGGCTCGCGCCCGCGGAGAAGGACCGGGAGGCTGACAGAAAG
CCGTACCACGACGACGGCGGCAGCAACGGCACTGTAGTCTCGCGGAGAGACGTCGGTGCACCACCGACGTCGACGCCGCC
GGAAGGGCAGTCGGTGCCGCCAGCTCCGCAGACGAACCGGAAGGCCCGGCGGTGCTGGTCGCCGGAGCTGCACCGCCGCT
TCGTCAATGCCCTTCAAATCCTGGGCGGCGCTCAAGGTATG--CACACAGACGTCCACATG-------------------
-----------CATCAAATTAACCAGCTGAATCTGAACGAACTACATGTGTACCAAAG----ATTCTAAACCTCCTTTGT
TGTTTGCAAATTGATTAAAGTGGCGACCCCGAAGCAGATCCGAGAGCTGATGAAGGTGGATGGATTGACCAATGATGAGG
TGAAAAGCCATCTCCAGGTAATTATAATCTCATCATCACGCATCTTGCATTCTCTCTTCGTAGTACGTTCCAGTTATTAT
GCATGCTGCTGCTTTCATTATGATGAGTAGAATGATTAACTGATTATTATATGAACACATGAGACA----TGGGTGTGTA
TCTAATTTTTAGTTTTTG-----TTTGTGTTGCGAGCAGAAGTACAGGTTGCACACGCGGCGGCCGATGCCGGCACCGTC
GGCGCCGCCGCCGGGGGCACCGCAGCTGGTGGTTCTCGGGGGCATATGGATGCCGCCGGACTACGCGGCGCAGGGGGCGG
GACCGGCCGGCATCTATGGGGCGCACCCGGCAACGCAGGCGCACTACACGGCGGCAGTGTCGGCGCAGGAGTACTACCAG
AACGCAGCCGCGGCCGCCCACCACGGCCACCACATGCAGCACCACCAGGCGGCCTCCATGGTGCACCACCGCGCGGTGGC
ACCTCCGCCCCCGCAGCCCGCCTACAAGGTGCACCCGTTGTCCGCAGCAGGGTCCCAGGCGTCATCGGAGGGCCGGCGTA
GCAGCGGCGGCGGCAGGGAGAGGTCGGAGAGCATTGAGGAGGAGGGCGAGGAGCGGGAGGACGAGGAGGACGAGGACGAG
GACGGCATGGCGGCGAACGGCGACGCCGAGCAGATCAACTACTAATTAAGTAGC-----------GCGCGCACCGATTAG
C-----TAGCCCCTAATTAAG--------------AAGTTGGTATAACGAGATTGTTTTCTGTCCGGAAAGTGATTTTTT
GGCGCGGAGAACGGAAGCCGGTCTCTGGCTTGAGTGGAGCAGCGGGAGCCTGAGATTGTCTCATTCGTGATGTGATCGAT
ATACGGATGGATTTGTGAGGGCTTTTCTCTCCTTCTTTTTTCTTCCCCTTCTCT--TTGGGGCTTTGTTTTTGTGCTAGC
AAATAATTTGGTAAATATGTCATGATGGAAATAT--GACTAGCTTTTGTACACTTG-TTGGAGGAAGAGA----------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------TGAT
TATTTGGGAGATGTGTCTACTCAGCTTTAGGGCTGGCAGTGTGTTTGTTCCTTGGTTTAAAGTT----TAAACGGTGTGA
ATTGTCAGTAAGCAATGATGGAAGACTATTGTTGTAGTGAATAAA-----TGGTTCCTGAATACCTCTCATTTGTATCGT
AACCTGTCT--------TTACCTCTCGGGTAGTCGGGTGGATGTTTGCCTGATATTCAAAGTGAATTCCTTTCACTTTTA
AAAGT--TTT-TTTTACTCTTTTTGTACGAAAGTTTACAAAGATAGATGGTATAGCACGATAACTGGTTGCATATCTTTC
CTACTTCTAAAGTTTTGAGTTGGTAGTCATCCATTCACCTATGTTAATAGGGTTTCTAAACAGTGTTAAAACATATATGA
AAAAATGTTTTATATGTAGACATAAAAAATATAATGTGTATGAAAACAAATAGGCGCCAACACATATATTAGAAAAAAAT
ATTGATCATGTATTTGAAAAATATTAAACACGTATTAAAAGATATACCTTTTTTTGAACATCAGTAAAGACACAAGCGCT
CATACACACGCGCATACACTCACCCATATGAACGCACACACGCACACCCTACCCCTACGAGCACCTCCGAAAGACTGAGC
CGGTATATCATCTTAAAATTTACGAAGTCACCGTAGGCACCTCATCGTCGACGGGAACGTCTCCTC
>chr3D_4
---AGAGGATGGTGTGATTCCCATCCCGGCTAGCTAGGTATATCTGGTGATTATCCCTTCGTGTGCGTGTCTGAAACCAT
TCAATATTGTTAATGGTAAAGTT-AAAAATATTCTTCAAGACACCTTGCTGGTTCCTTCTTGGACTTGCAAGGTTCTCTT
TGGACTACTTTGAGGCGGT-------CACCTTTAATTCTTTTGAATCAGGAGCACCGAGAGAAGCTATGCTAACTTCCTG
TGGGTGATGCGTTGATTCCCTGCCGTAAAAACGATTGTAAAGTTTGTTTAACCTATCACAAAAATGAGGCATCCATGTGA
AAAGATTGACCGAGGAAAATACATCCATGTGGTGCTGGATGGGTGGCCAGACTTTCAGCATGACAAGACATAGCCAACAA
ACCAAAGGTTCCTGGATTTTCATGCATGTAAGATGTCCGGAGATATTTAATCAGAGGGTGCTGTATGTATATGCTACTTG
CAAGGGCACACGTATATGG------------------------------GCATATACTAGCTAGGTTCATTTGATCTTCC
TATTAAAACGGTAGCTGGACAAGGAGAGAGAATGAGACTCACTGTACATACAGTACAAAGACCAGAAACCACATGACCCC
AGCTGTGTCATGCGTGGTCGCCTT--------------GCTACGGCTATATCCTACTGCACCACCTTGTAGTACATAAAA
CCTCCTGCATGCAT----------GCAGAGGATTAGCTTTTGGCCCCTTTGATCTTTGCAAGAAGTTACCATGCCCTTGG
CTTTATCCCTCTAGTCTAGTCTGCAGGTCTGGTGGTCTACAGTACCTAGATCAAAGTATCAAACACACACATACATACAG
GGAGAAACTTTTCCTTTTCACCCC-TCTAAATCCGACTTTATTCTCTCTACCCTCCCAGAAATCACCCTTAAAAACAAGC
CGATTCCACCCCGATCCCCCCATCCATACACACCTCAGACCCC-----CCCTGATATCTAAGCAAGAGTAATATACTGGA
GCTTCCCTAGCACCTCACTATAGCTGCACCACTTCACACACACACATGGATTCCTCGCCGTCTGACCTAACCCTAGACTA
CACTCCCAACGGCAACGGCACGGCGTCTGCCGGCGGCGGCTACCCGAAGCAGGCGTCGCCGGTCGTGGACCACCACCATC
ATCTCTCGGCGGAGCAGGCGACGACGCAGAAGCTGCAGGAGTTCCTGGCCCGCCTCGACGACGAGCGGCTCAAGATCGAC
GCCTTCAAGCGCGAGCTCCCGCTCTGCATGCAGCTCCTCAACCAAGGTAATGAACGTGCCCAACTGCCCATGCATGTGTG
CTTACGTGGAAGGC-GATGGAGCTCTGCCTGACTGAATAATGTATGTGTGGGTGGGTGCAGCTATGGAGGCGTACAGGCA
GCAGCTGGAGGCGTGCCAAATGGGGAGCCATGGCGGCGCGGCGGCGAGGGCGCCGCTGGTGCTGGAGGAGTTCATACCGC
TGAAGAACATCGGGATCGACGCGGCGGAGAAGGCGGCCGGGAACGCGCCGTCGGAGAAGGCGAACTGGATGGTGTCCGCG
CAGCTGTGGAACGGGCCGGCCGCGGGGGACGCGGCGGCCAAGGGCCCGCAGACTCCCAAGGAGCGCTCGGAGCACCCGCT
GGACACGAGCCCCATGCTCGGCGCGCTCGACGGCGGCGGCGGCAACGGCGTCGGCGCCTTCCTCCCGTTCACCAAGGAGA
AGGCCTGTATGGCGGAGAGCGCCGCGCTGCCGGAGCTCGGGCTCGCGCCCGCGGAGAAGGATCGGGAGGCTGACAGAAAG
CCGTACCACGACGACAGCGGCAGCAACGGCACTGTAGTCTCGCGGAGAGACGTCGGTGCACCACCGACGTCGACGGCGCC
GGAAGGGCAGTCGGTGCCGCCGCCTCCGCAGACGAACCGGAAGGCCCGGCGGTGCTGGTCGCCGGAGTTGCACCGCCGCT
TCGTCAATGCCCTCCAAATCCTGGGCGGCGCTCAAGGTATACACACACAGACGTCCACATGTCATGATC-----TAGTAA
CTATTTGGATGCATCAAATTAACCTGCTGAATCTGAATGAATTACGTGTGTACCCAAGACAAATTCTAAATCTCCTTTGT
TGTTTGCAAATTGATTAAAGTGGCGACCCCGAAGCAGATCCGAGAGCTCATGAAGGTGGATGGATTGACCAATGATGAGG
TGAAAAGCCATCTCCAGGTAACTATAATCTCATCATCACGCATCTTGCATTCTCTCTTCGTA---CGTTCCAGTAATTAT
GCATGCTGCTGCTTTAATTATGA---GTAGAATGACTAACTGATTATTATATGAACACATGAGACATGG----GTGTGTA
TCTAAATTGAAGTTTTCGTTTTTTTTGTGTTGCGAGCAGAAGTACAGGCTACACACTCGACGGCCGATGCCGGCACCGTC
GGCGCCGCCGCCGGGGGCACCGCAGCTGGTGGTTCTCGGGGGCATATGGATGCCGCCGGACTACGCGGCGCAGGGGGCGG
GACCGGCCGGCATCTATGGGGCGCACCCGGCGACGCAGGCGCACTACACGGCGGCGGTGTCGGCGCAGGAGTACTACCAG
AACGCAGCCGCGGCTGCCCACCACGGCCACCACATGCAGCACCACCAGGCGGCCTCTATGGTGCACCACCGCGCGGTGGC
GCCTCCGCCCCCGCAGCCCGCCTACAAGGTGCACCCGGTGTCGGCAGCAGGGTCCCAGGGGTCGTCGGAGGGCCGACGTA
GCAGCGGCGGCGGCAGGGAGAGGTCGGAGAGCATCGAGGAGGAGGGCGAGGAGCGGGAGGACGAGGAGGACGAGGACGAG
GACGGCATGGCGGCGAACGGCGACGCCGAGCAGATCAACTACTAATTCAACGGAATAATTAAGTAGCGCGCACCAATCAG
T-----TAGCCCCTAATGATCGTACGTCCTAGCACAAGTTGGTATAACGAGATTGTTTTCTGTCCGGAAAGTGATTTTTT
GGCGCGGAGAACGGAAGCCGGTCTCTGGCTTGAGTGGAGCAGCAGGAGCCTGAGATTGTCTCATTCGTGATGTGATCGGT
AAACGGATGGATTTGTGAGGGCTTTTCTCTCCTTCTTTTTTCTTCCCCTTC-CT--TTTGGGCTTTGTTTTTGTGCTAGC
AAATAATTTGGTAAATATGTCATGATGGAAATAT--GACTAGCTTTTGTACACTTGGTTGGAGGAAGAGA----------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------TAAT
TATTTGGGAGATTTGTGTACTGAGCTTTAGAGC------TGTGTTTGTTCCTTGAT-TTAAAGTTTAATAAACGGTGTGA
ATTGTCAGTAAGCAATAATGGAAGGCCATTTCTTTAG-----TGCATAATTGATTCCAGAATTTCTCTGATTTGTGTCAT
AACCTGTCTCAGTATTTTGACCTCTCGGGT--------TGATGTTCGCCTGATATCCAAAGTGAATTCCTTTCACTTTAG
AAAGTTATTT-TTTTACTCTTTCTGCACCAAAGTTTACAAAGGTAGATGATATAACACTATAACTTGTTGCATAT-----
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>chr3B_608
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--------------------------------------GCTACGGCTATATCCTACTGCACCACCTTGTGGTACATGAAA
CCTCCTGCATGCATGCAT--GCATGCAGAGGATTAGCTTTTGGCCCCTTTGATCTTTGCAAGAAGTTACCATGCCCTTGG
CTTTATCCCTCTAGTCTAGTCTGCAGTTCTGGTGGTCTACAGTACCTAGATCAAAGTATCAAACACACACATACATACAG
GGAGAAACTTTTCCTTTTCACCCCCTCTAAATCCGACTTTATTCTCTCTACCCTCCCAGAAATCACCCTTAAAAACAAGC
CGATTCCACCCCGATCCCCCCATCCACACACACA--------C-----CCCTGATATCTAAGCAGGAGTAATATACTGGA
GCTTCCCTAGCACCTCACTA--GCTGCACCACTTCACAC----ACATGGATTCCTCGCCGTCTGACCTAACCCTAGACTA
CACGCCCAGCGGCAACGGCGCGGCGTCTGCCGGCGGCGGCTATCCAAAGCAGGCGTCGCCGGTCGTGGACCACCACCATC
ATCTCTCGGCGGAGCAGGCGACGACGCAGAAGCTGCAGGAGTTCCTGGCCCGCCTCGACGACGAGCGGCTCAAGATCGAC
GCCTTCAAGCGCGAGCTCCCGCTCTGCATGCAGCTCCTCAACCAAGGTAATTAACGTGCCGAACTGCCCATGCATGTGTG
CTTACGTGGAAGGC-GATGGAGCTCTGCCTGACTGAATAATGTATGTGTGGGTGGGTGCAGCTATGGAGGCGTACAGGCA
GCAGCTGGAGGCGTGCCAGATGGGGAGCCATGGCGGCGCGGCGGCGAGGGCGCCGCTGGTGCTCGAGGAGTTCATACCGC
TGAAGAACATCGGGATCGACGCGGCGGAGAAGGCGGCCGGGAACGCGCCGTCGGAGAAGGCGAACTGGATGGTGTCGGCG
CAGCTGTGGAACGGGCCGGCTGCGGGAGACGCGGCGGCCAAGGGCCCGCAGACTCCCAAGGAGCGCTCGGAGCACCCGCT
GGACACGAGCCCCATGCTGGGCGGGCTCGACGGCGGCGGCGGCAACGGCGTCGGCGCCTTCCTCCCGTTCACCAAGGAGA
AGGCCTGTATGGCGGAGAGTGCGGCGCTGCCGGAGCTCGGGCTCGCGCCCGCGGAGAAGGACCGGGAGGCTGACAGAAAG
CCGTACCACGACGACGGCGGCAGCAACGGCACTGTAGTCTCGCGGAGAGACGTCGGTGCACCACCGACGTCTACGGCGCC
GGAAGGGCAGTCGGTGCCGCCCGCTCCGCAGACGAACCGGAAGGCCCGGCGGTGCTGGTCGCCGGAGCTGCACCGCCGCT
TCGTCAATGCCCTTCAAATCCTGGGCGGCGCTCAAGGTATT--CACACAGACGTCCTCATGTAATGATCTACTGTAGTAA
CTATTTGGATGCATCAAATTAACCTGCTGAGTCTGAATGAATTACGTGTGTGCCCAAGACAAATTCTAAATCTCTTTTGT
TGTTTGCAAATTGATTAAAGTGGCGACCCCGAAGCAGATCCGCGAGCTCATGAAGGTGGATGGATTGACCAATGATGAGG
TGAAAAGCCATCTCCAGGTAATTATAATCTCATCAT-ACGCATCTTGCATTCTCTCTTCGTA---CGTTCCAGTAATTAT
GCATGCTGCTGCTTTAATTATGA---GTAGAACGATTAACTGATTATTATATGAACACATGACACATGGGTGCGTGTGTA
TCTAAATTGAAGTTTTTG-----TTTGTGTTGCGAGCAGAAGTACAGGTTGCACACGCGACGGCCGATGCCGGCGCCGAC
GGCGCCGCCTGCGGGGGCGCCGCAGCTGGTGGTTCTTGGGGGCATATGGATGCCGCCGGACTACGCGGCGCAGGGGGCTG
GACCGACCGCCATCTACGGGGCGCACCCGGCGACGCAGGCGCACTACACGGCGGCGGTGTCGGCGCAGGAGTACTACCAG
AACGCAGCCGCGGCCGCCCACCACGGCCACCACATGCAGCACCACCAGGCGGCCTCCATGGTGCACCACCGCGCGGTGGC
ACCTACGCCACCGCAGACCGCCTACAAGGTGGACCCGGTGTCGGCAGCAGGGTCCCAGGGGTCGTCGGAGGGCCGGCGTA
GCAGCGGCGGCGGCAGGGAGAGGTCGGAGAGCATCGAGGAGGAGGGCGAGGAGCGGGAGGACGAGGAGGACGAGGACGAG
GACGGCATGGCGGCCAACGGCGACGCCGAGCAGATCAACTACTAATTAAACGGATCAATTAAGTAGCGCGCGCACCAATT
AGCTAGTAGCCCCTAATTAAG--------------AAGTTGGTATAACGAGATTGTTTTCTGTCCGGAAAGTGATTTTTT
GGCGCGGAGAACGGAAGCCGGTCTCTGGCTTGAGTGGAGCAGCGGGAGCCTGAGATTGTCTCATTCGTGATGTGATCGAT
ATACGGATGGATTTGTGAGGCCTTTTCTCTCCTTCTTTTTTCTTCCCCTTC-CTCTTTTGGGCTTTGTTTTTGTGCTAGC
AAATAATTTGGTAAATATTTCATGATGGAAATATATGACTAGCTTTGTAAACTTGG-TTGGAGGGGAAAATAATACTCCC
TCCGTTCCTAAATAATTGTCTTTCTAAAGATTTCAACAAGTGACTACATACGGAGCAAAATGAGTGAATCTACACTCTAA
AATATGTCTACATACATCCGTATGTTATAGTCCATTTGAGATGGCTAGAAAGACAACTATTTGGGAACGGAGGGAGTAAT
TATTAAGGAGATCAGTGTACTGAGCTTTAGGGC------TGTGTTTGTTCCTTGATTTTAAAGTTCAATAAACGGTGTGA
ATTGTCAGTAAGCAATAGTGGAAGACCATTTCTTTTAAGTGCTGAATAATTGATTCCAGAATTTCTCTGGTTTGTGTAAT
AACCTGTCTCAGTATTTTTACCTCTCGGGT--------GGATGTTCTCCTGATATCCAAAGTGAATTCCTTTCACTTTAA
AAAAGATGAACTTTTACTCTGTTTGCACCAAAGTTTACAAAGATGGATGATATAACACTATAACTTGTTGCATAT-----
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------------------------------------------------------------------
>SNPs
SSS-------------------S---------------------------------------------------------
---------------------S-S-------------------------------SS-----------------------
---------------S---SSSSSSS------------------------------------------------------
---------S---------------------------------------------S------------------------
------------S------------S------S-----------------------------------------------
----------S-SS--------------S-S----S--S---------S------------------------------S
--------S--SS----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------S--------------------S-
SS-SS-S-----------------------------------------------------------------S-------
-S--------S-S-----------SSSSSSSSSSSSSS------------------------------S-----------
------------------SS------------------------------------------------------------
-------------------------------------------S------------------------------------
-------------------------------------------------S------------------------------
-------------------------------------------SSSSS--S-----------------------------
--------------------------------------------------S-----------------------------
---S--------------------SS------S--S--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------SS---------------------------S----------------------------S--------
---------------------------------------------------------------------------S----
--------------------------------------------------------------------------------
-----------------------------------------------S--------------------------------
S-----------------------------------------------S-------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
---------------------S----------------------------------------------------------
----------------------------------------S---------------------------------------
------------------------S------------S---S---S--------S---------------S---------
------------------------------------------------S-------------------------------
--------------------------------------------------------------SSS---------S-----
---------------S-------SSS----------------------------------------------S-------
-----S--SS-------------------------------------------------S--------------------
--------------------------------------------------------------------------------
-------------------------------S-----------------------S------------------------
--------------------------------------------------------------------------------
-------------------------------------S----S----------------S---S----------------
----------------------------------S---------------------------------------------
-------------------------------------------------SSS-S--------------------S--S--
S-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S------S---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------S--
------------S---S----S-----------SSSSSS---------------S---S--SS-----------------
----------------S---------S---SS-S---S-SSSSS--------S----S----SS----S------S--S-
------------------------------SSSSSSSS-------S---------S----------------------S-
-------------------------S--S--------------------S----S---S------S---------SSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_709
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-------------------------------------------------ATCCTACTGCACCACCTTGC-----------
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>reverse_2041
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----------------------------------------GCACACAGACGTCCACATG---------------------
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>forward_1374
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------TGTGTG
CTTACGTGGAAGGG------------------------------------------------------------------
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>reverse_3634
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---------------------------------CGGGTGGATGTTTGCCTGAT---------------------------
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------------------------------------------------------------------
