>input_sequence_43385
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------ATGCCGGTTCCTCTTGCCCCTTACCCAACCCCT
CCTGTGCCCTTCACACCACCGGCTCCCAATGCAGGTATGGTCGCCGGCTGGGTACTGCAAGAACGGAGACGGCTTTGGCA
ATCCTTTGATGTTCCCCTTTTTTGGTTTTTGAGAAACTATTA-TTTGATTGATGTTTCTTAGCTACCCAGAAAACCAAGA
TGTTAACGGCATAACGTTCTGGCTTCTTCATGATTTCTGGACTAAAAAGTATATAGGAGCTGATTTTTCATCTGCTA---
-----------TTTTTGTCTCCGAAGTTCTGGTAGAACAGATTAAGCCCAAGATACACTATCAACTAAGGCATAGATGTT
TCTCTGCTGATTTTGCCGTTGCAATGCTTTTCTGGGATGTAACTTTTGGTTACTAGTAGGTGAGCTTCAGCCACTGAAAT
TTCATAACTATGGTTTCATGCTCGTGCAATTTCAGGGGCTCAAAGCCAACTTGTCTGCTCCGGGTGCCGGAATCTGCTCA
TGTATCCTGCCGGCGCAACGTCGGTCTGCTGCGCAGTTTGCAGTACCGTGACCGCTGTTCCGGCTCCCGGTATGCACATC
AATCTCATTTTGCTCATCAAAGATTTGTAAGTAATGTGGCAGCTCAACATTGAGTTCCATATTTACAACATTATTA---C
TAGTATAGAAGACAGTAGTGTGCATTCTAATCGACTGTGACAAGTTACATTAGCTGGAAACTATCCTCAAGTGCAGTTCT
CTGAATATATTTTCCACCCTGATTCGGTGTAGGGACTGAGATGGCGCAGCTAGTTTGCGGGGGATGCCACACTCTTCTCA
TGTACATACGCGGCGCCACAAGTGTACAGTGTTCTTGCTGCCACACTGTCAACCTGGCAATGGAAGGTATATCGACCAAA
GCTTT----------------------TATTTCTCTCTCTCTTCCTGGG--TTGCAAGTGGTATATGCTGCTGGTTTTGA
TTCCCTTTTCGAAACGATGTTGACATTGATTCGTGTATGCAAAACCCTCCTTCTGAGCAGAATGTATTCTGAGGTTGGAA
AAGCTCTAGCAATCAGTCGATAACCGTTAACATCGTAAAATTGGCTTATCCTGAAGTCGCACTCATCAAAATTGGACAGT
AGGATGTATGCATTTGTTGTGATGCAGAAAACAAAAGGTTTGACAAGGATCTCCCGGATCTACCAAA-AGTTTGATGAAT
--ATCTCTCCTAGTTTTACCATAAGTCTGACAAACATGTCCTACAGTTACTACTGAACGATTCACAAACACAAAGATTGA
AAGATACTCCCTCCGTAAACTAATATAAGAGCGTTTAGAATACTAAAATAGTGATCTAAACGCTCTTATATTAGTTTACA
GAGGGAGTACCACTAAGCATTGGGTCCTGACTTCTGAAGATGCTCCACAGGTTCTAAGAACTCAGAAGGATGAGTGCATA
GAGTTGATGTGTGCTCATCAAGTCTCAAATACTCTGAATGACAAATTCTATCTTGTGCTTGGCCGCAGCGAATCAGGTTG
CGCATGTAAACTGCGGGAGTTGCCGAATGCTGCTCATGTACCAGTATGGCGCGAGGTCCGTCAAATGTGCAGTCTGCAGT
TTCGTCACATCAGTTGGGGTAAGTATTCATT-TCAGAGCTGTCAATCCTAGCACGCGACAAGAGCATTCGCTCTTTTTCT
GGATTTTTCACATCATTTAATTGGCATTGCTGTTGAGCGACCTGAATTTCATACCAACCATATCTGAATGCGTTACTTCT
TTACCCTTTTCAGGCATCATCAGGTGCAGAGCAGAAGCCCAGCAACTGA-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>chr1B_1_TraesCS1B01G288600
CTTGCTTTTATGCATGCACCAACTAATCATAGGATTGGGCCATAAGCATCGGTGCTTGGTGATGCCCCTCCTCTTAGGCC
AGTTTGGAAACGCGGGGTCGGGAACAACAAAAAACATAGAAATATGATAAAAGTTCACATGAAAA---------------
-ACACACAAATTTTCACAGCCAGCCCATTTGTTAGACGGGAAATGAGGAAACACAAGAACTCTCAATAGAGTACCCGGCA
TGATCTTG--GAAGAGATAAACATGTTTATCTCAAATTTCTTGCTTATTTTTGTTCTAAAATAACATGTACTAC------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------TACGTAAATAATTGTTCACGGTGATTTC
TAAAAACG-AAAATTACACGAAACATGATAGCATAATGAGTTCGGACGGGGCCCACATGGCATAGGCGGATGAGAGAGAG
----AGAGAGCCCACGTTCTCGACCACAGCGGTATCGTGCTTTATACCTTATCTGCCGCATTCCCTCCAACTCATGTTGT
TATACTGAG-----C-AAACTTATTCGTCTCGAAATCTGCACCAGATCGAGCGAAGCAACGCGAGCCGAGCCGGAGGCGT
TCGTCTGCCCGGGGTGGCGCCATGCGGATCCGTCTCTTCTTCTGAACCGGGCAAGCGCGAGCCGCCTTCTTCCTCGTGCT
CGACGGCGGCGACGAGCGTCGGTGGCGGCATAGCACAGTCCAGCAACGAGCAGGTGATTCGGCGCCCCGCGACGAGTGCG
TGAAGGCGACTCTCCGTCTGTCTGATTCCTTGCTTGACGCTCGATTTGCCGTCAGGCATACATAAGCGCCTCAACTGTAC
TCTGCCTTGCTATGATCTTGATGATTCCTAGTCCTAGTACGCCTTTTCCCTGTAAAGTTGAAGCGTTCTCACCAGAATCT
CCTACGCTTTCTGCAGGGTTTCATGTAGGGGAGGGCAACCTGTTCCCAGCCCTCGATTCCCACCGGAGCGTGCGAAGTCC
AGTCGGCAGCAACGGCGACGCCGGTTCAGGCAGCCGCGGGCACGGCAATGCCGGTTCCTCTTGCCCCTTACCCAACCCCT
CCTGTGCCCTTCACACCACCGGCTCCCAATGCAGGTATGGTCGCCGGCTGGGTACTGCAAGAACGGAGACGGCTTTGGCA
ATCCTTTGATGTTCCCCTTTTTTGGTTTTTGAGAAACTATTA-TTTGATTGATGTTTCTTAGCTACCCAGAAAACCAAGA
TGTTAACGGCATAACGTTCTGGCTTCTTCATGATTTCTGGACTAAAAAGTATATAGGAGCTGATTTTTCATCTGCTA---
-----------TTTTTGTCTCCGAAGTTCTGGTAGAACAGATTAAGCCCAAGATACACTATCAACTAAGGCATAGATGTT
TCTCTGCTGATTTTGCCGTTGCAATGCTTTTCTGGGATGTAACTTTTGGTTACTAGTAGGTGAGCTTCAGCCACTGAAAT
TTCATAACTATGGTTTCATGCTCGTGCAATTTCAGGGGCTCAAAGCCAACTTGTCTGCTCCGGGTGCCGGAATCTGCTCA
TGTATCCTGCCGGCGCAACGTCGGTCTGCTGCGCAGTTTGCAGTACCGTGACCGCTGTTCCGGCTCCCGGTATGCACATC
AATCTCATTTTGCTCATCAAAGATTTGTAAGTAATGTGGCAGCTCAACATTGAGTTCCATATTTACAACATTATTA---C
TAGTATAGAAGACAGTAGTGTGCATTCTAATCGACTGTGACAAGTTACATTAGCTGGAAACTATCCTCAAGTGCAGTTCT
CTGAATATATTTTCCACCCTGATTCGGTGTAGGGACTGAGATGGCGCAGCTAGTTTGCGGGGGATGCCACACTCTTCTCA
TGTACATACGCGGCGCCACAAGTGTACAGTGTTCTTGCTGCCACACTGTCAACCTGGCAATGGAAGGTATATCGACCAAA
GCTTT----------------------TATTTCTCTCTCTCTTCCTGGG--TTGCAAGTGGTATATGCTGCTGGTTTTGA
TTCCCTTTTCGAAACGATGTTGACATTGATTCGTGTATGCAAAACCCTCCTTCTGAGCAGAATGTATTCTGAGGTTGGAA
AAGCTCTAGCAATCAGTCGATAACCGTTAACATCGTAAAATTGGCTTATCCTGAAGTCGCACTCATCAAAATTGGACAGT
AGGATGTATGCATTTGTTGTGATGCAGAAAACAAAAGGTTTGACAAGGATCTCCCGGATCTACCAAA-AGTTTGATGAAT
--ATCTCTCCTAGTTTTACCATAAGTCTGACAAACATGTCCTACAGTTACTACTGAACGATTCACAAACACAAAGATTGA
AAGATACTCCCTCCGTAAACTAATATAAGAGCGTTTAGAATACTAAAATAGTGATCTAAACGCTCTTATATTAGTTTACA
GAGGGAGTACCACTAAGCATTGGGTCCTGACTTCTGAAGATGCTCCACAGGTTCTAAGAACTCAGAAGGATGAGTGCATA
GAGTTGATGTGTGCTCATCAAGTCTCAAATACTCTGAATGACAAATTCTATCTTGTGCTTGGCCGCAGCGAATCAGGTTG
CGCATGTAAACTGCGGGAGTTGCCGAATGCTGCTCATGTACCAGTATGGCGCGAGGTCCGTCAAATGTGCAGTCTGCAGT
TTCGTCACATCAGTTGGGGTAAGTATTCATT-TCAGAGCTGTCAATCCTAGCACGCGACAAGAGCATTCGCTCTTTTTCT
GGATTTTTCACATCATTTAATTGGCATTGCTGTTGAGCGACCTGAATTTCATACCAACCATATCTGAATGCGTTACTTCT
TTACCCTTTTCAGGCATCATCAGGTGCAGAGCAGAAGCCCAGCAACTGAAGTCCTGCAAGTTCATACTGAAGGCAGCTTC
CCGGAATAAGGATGCTTTGAGTGCACATGTATAGAGTTCTTCCCAGAAGCAATCTCTTCCTCCCATCTCCATTTCCCACC
TTCGTTGGACCTGGCGAGCTTGCGGAATAATCAAGAGTTTTTGGTAATACATAGTGCTCGAAATTCGTCGAATCATCTGT
GTAACTGGATCAGACAGATATAATGAACCCACCCTGTTTATGTTCAATCCTAGCTTCTTTTACATGTGTTTTATCTCAGA
AA--------TTTTCTTCTTCTTGTGTTTATCTGAAGAATTTCTGCCGATGCGCTTTTGTCGTGGCAATTCTTGAACCGA
ACAATATTACT---GCCGACATGATCAT--------------------GAACAGTTCACGAACACATAC-AAGTCCAAAT
GCTGCATGATTAGGGTGCGCAAACGCATCAGATGGGAGTTGAATGGTGGACTCTGGAGGAGCGGTGATGTTGATTGCCAT
GGCACACAGGATGGGGTGAGTGTTGGGTACCATCTCTCTGACTCTTGTCCAACTCTGAATCTCCGATGGCATCTCCCAGC
CAG----CAAACAGCTTATGGTGATACGATGGCATGTCATGCATCTGATCTGAGCCTGAGAAGGACTGTCAGTCCCTGAC
CACTCTATCAATGGACCCAATTATTGCCAGGAAAGTTGCGCGGAAAAGTTTAGAG-----AGCACAATGATGTAAAAGGC
GTAGATGGTGCTCAGTCGCGTCAGCACTCAATGGTGCCTGCTGCTAGTCACATTTCAGAGACATACTAGTACTACTGAAT
AGCAATATCACTGTTCATATGTTTTTTCTATTCCTGCGTTTTTAAAATCATGTGGACCGAAGGAGCCATAATGAGTCTAC
GTGCATGCTGCAGGATTGGTGGGTATCAAAGCTGTTGTTATCTGGTGGACCGGGACTTTGTGTGCACCCGGTGCATTGCA
TCGGTTTATTAAAAAAAATGAGAA---TTTTTTAGGGGTAAAAAACCGAAAGA
>chr1D_1
CTTGCTTTTATGCATGCACCAACTAATCATAGAATTGGGCCATAAGCATCGGTGCTCAGTGGTGCTT----------GCC
AGTTTGGAAACGAGGGGCGGGAAATGACAAAAAACATATAAATATGTTAGAAGTTCACATGAAAAACAGATGAATGAGAA
AACACATAATTTTTCACAGCGAGCCGTTTGTAACG-CGGGAAATGAGGAAACACAAGGACTCTCAATAGAGTAACTGGCA
TGATCTTG--CAAGGGATAAACATGTTCATCTCAAATTTCTTGCTTATTTTTATTCCGAAACCACATGTC---C------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------TACGTGAATAATTGTTCACAGTGATTTC
TAAGAACAATAAATTACACGAAACAGGATAGCATAATGAGTCCAGACGGGCCCCACATGGCATAGGCGGATAAGAGAGAG
AGAGAGAGAGCCCACGTTCTCGACCACAGCGGTATCGTGCTTTA--CCTTATCTGCCGCATTCCCTCCAACTCATGTTGT
TATACTGAGCAAACC-AAACTTATTCGTCTCGAAATCTGCACCAGATCGAGCTCAGCAACGCGAGCCGAGCCGGAGGCGT
TCGTCTGCCCGGGGTGGCGCCATGCGGATCCGCCTCTTCCTCTGAACCGGGCAAGCGCGAGCCGCCTTCCTCCTCGTGCT
CGACGGCGGCGACGAGCGTCGGTGGCCGCATAGCAAAGTCCAGCAACGAGCAGGTGATTCGGCGCCCCGCGACGAGCGCC
TGAAGGCGACGCTCCGTCTGTCTAATTGCTTGCTTGACGCTCGATTTGCCTC--------------CGGCTCGACTGTAC
TCTGCCTTGCTATGATCTTGATGGTTCCTAG------CACACCTTTTCCCTGTGAAATTGAAGCGTTCTCACCGGAATCT
CCTGCGCTTTCTTCAGGGTTTCATGTAGGGGAGGGCAACCTGTTCCCAGCCCTCGATTTCCACCGGAGCGTGCGAAGTCC
AGTCGGCAGCAACGGCGACGCCGGTGGAGGCAGCCGCGGGCACGGCAATGCCGGTTCCTCTTGCCCCTTACCCAACCCCT
CCTGTGCCCTTCACACCACCCGCTCCCAATGCAGGTATGGTCGCCGGCTGGGTACTGCAGGAACGGAGACGGCTTTGGCA
ACCCTTTGATGCTCCCCTTTTTTGTTTTTTGAGAAACTATTA-TTTGATTGATGTTTCTTAGCTACCCAAAAAACGAAGA
TGTTAACGGCATAACGTTCTGGCTTCTTCATGATTTTTGGACTAAAAAGTCCATAGGAGCTGATTTTTCATGTTGCAGTT
CCTTCTGCTGTTTTTATTCTCCGAATTTCTGATAGAACAGATTAAGCCCGAGATACTCTATCAACTAGGCCATAGATGTT
TCTCACCTGATTTTGCTGTTGCAATGCCTTTCTAAAATGTAACTTTGGGTTATTGGTAGGTGAGCTTCAGCCGCTGAAAT
TTCATAACTAAGGTTCCATGCTTGTGCAATTTCAGGGGCTCAAAGCCAACTTGTCTGCTCTGGGTGCCGGAATCTGCTCA
TGTATCCTGCCGGCGCAACGTCGGTCTGCTGCGCAGTTTGCAGTACCGTGACCGCTGTTCCGGCTCCCGGTATGCACATC
AATCTCATTTTGCTCATCAAAGATTTGTAAGTAATGTGGCAGCTGAACATTGAGTTCTATATTTACAAGATTAG------
TAGTATAGAAGACAGTAGCGTGCATTCTAATCGACTGCGACAAGTTACATTAGCTGGAAACTATCCTCAAGTGCAGTTCT
CTGAATATATTTTCCACCCTGATTCGGTGTAGGGACTGAAATGGCGCAGCTAGTTTGCGGAGGATGCCACACTCTTCTCA
TGTACATACGCGGCGCCACAAGTGTACAGTGTTCTTGCTGCCACACTGTCAACCTGGCAATGGAAGGTACATGGACCAAA
GCTTT----------------------TCTTTCTCTCTCTCTTCCCGGGACTTGCAAGTGGGATATGCTGCTGGTTTTGA
TTCCCTTTTCGAAACGATGTTGACATTGATTCGTGTATGTAAAATCCTCCTTCTGGGCAGAACGTATTCTGAGGTTGGAA
AAGCTCTAGCAATCAGTCGATAACCGTTAACATCGTAAAATTGGCTTATCCTGAAGTCGCACTCATCAAAATTGGACACT
AGGATGTATGCATTTGTTGTGATGCAGAAAACAAAAGGTTTGACAAGGATCTCCCAGATCTACCAAA-AGTTTGATGAAT
ATATCTCTCCTAGTTTTACCATAAGTCTGACAAACATGTCCTACAGTTACTACTGAACGATTCACAAACACAAAGATTGA
AAGGTACCACT---------------------------------------------------------------------
---------------AGCATTGGGTCTTGACTTCTGAAGATGCTCCACAGGTTCTAAGAACTCAGAAGGATGAGTGCATA
GAGCTGATGTGTGCTCATCAAATCTCAAATACTCTGAATGACAAACTCTATCTTGTGCTTGGCCGCAGCGAATCAGGTTG
CGCATGTAAACTGCGGGAGTTGCCGAATGCTGCTCATGTACCAGTATGGCGCGAGGTCCGTCAAATGTGCAGTCTGCAGT
TTCGTCACGTCAGTTGGGGTAAGTATTCATTATCGGAGCTGTCAATCCTAGCACGCGACAAGAGCATTTGCTCTTTTTCT
GGATTTTTCACATCATTTAATTGGCATTGCTGTTGAGCGACCTGAATTTCACACCAACCATACCTGAATGCGTTACTTCT
TTACCCTTTTCAGGCATCATCGGGTGCAGAGCAGAAGCCCAGCAACTGAACTCCTGCAACTTTATTTGGGAAGCAGCACC
CCGGAATAAGAATGCTTTGAGTGCACATGTATAGAGTTCTTCCCAGAAGCAATCTCTTCCTCCCCTCTCCATTTCCCACC
TTCGTTGGACCTGGCGAGCTTGCGGAATAAACAAGAGTTTTTGGTAATACATAGTGCTCAAAATTCGTCGAATCATCTGT
GTAACTGGATCAGACAGATATA-TGAACCCACCATGTTTATGTTCAATCCTAGCTTCTTTTACTTGTGTTTTATTTATAT
TTATTCAGATTTTTTTTCTCCTTGTGGTTATCTGAAGAATTTCTGCCGACGCGCCTTTGTCGTGGCAGTTCTTGAACCGA
ACAATATTATTACCGCCAACATGATCAG--------------------GAACAGTTCACAAACACATACAAAGTCCAAAT
GCTGCATGATTAGGGTGCGCAAACACATCAGATGGGAGTTGAATGGTGGACTCTGGAGGAGAGTTGATGTTGATTGCCAT
GGCACACAGGATTGGGTGAGTGTTGGGCACCATCACTCTGACTCTTGTCCAACTCTGAATCTCTGATGGCCTCTCCCAGC
CAG----CAAACAGCTTATGGTGATACGATGGCATGTCATGCATCTGGTCTGAGACTGAGAAGGACTGTCAGTCCCTGAC
CACTCTATCAATGGACCCAATTATTGCCAGGAAAGGTGCGCGGAAAAGTTTAGAGAACAGAACACAATGATGT-AAAGGC
GTAGATGGTGCTCGGTCGCGTCAGCACTCAGTGGTGCCTGCTGCTAGTCACAGTTCAGGGACATACTCGTACTACTGAAT
AGCAACATCACTATTCATGTGTT---------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>chr1A_1
CTTGCTTTTATGCATGCACCAACTAATCATAGGATTGGGCCATAAGTATCGGTGCTCGGTGATGCTTCTCCTCTTAGGCC
AGTTTGGAAATGCGGAGTAACAA-----AAAAAATATAGAAATACGAAAGTAGTTCACATGAAAAATAGATGAATGAG-A
AACACATAAATTTTCACAGCGAGCCGGTTGTAACG-CGGGAAATGAGGAAACACAAGAACTCTAAATAAAGTACCGAACA
TGTGATCTTCGAAGAGATAAACATGTTTATGGTAAATTTCTTGCTTATTTTAATCTAAAGCCACATGTAGCACAATACGT
AAATAAATTTTTTTTGAACCGGGCATTACCCCTTTTCATTACTCTCATAACGGAAATAACATCAGTTCAACATGACCACC
CAAGAAACTTAGAAAGGGGAAGCGGGCTCAAAGCATCGCTGGGAAACCCACGACAAACACCCGTCATCCGGCAGTTCATC
ATGGGGCGAAAACCCAGCGACACCAAAGCATCTACCAACCCAGCGACACCAATACGTAAATAATTGTTCACAGTGATTTC
TAAAATCAAAAAATCACACGAAACAGGATAGCATAATGAGTTTAGATGGGGCCCACATGGCATAGGCGGATAAGAGAGAG
AG--------CCCACGTTCTCGACCACAGCGGTATCGTGCTTTA--CCTTATCTGCCGCATTCCCTCCAACTCATGTTGT
TATACTGAGCAAACCAAAACTTATTCGTCTCGAAATCTGCACCAGATCGAGCTCAGCAACGCGAGCCGAGCCGGAGGCGT
TCGTCTGCCCGGGGTGGCGCCATGCGGATCCGTCTCTTCCTCTGAACCGGGCAAGCGCGAGCCGCCTTCCTCCTCGTGCT
CGACGGCGGCGACGAGCGTCGGTGGCGGCACAGCACAGTCCAGCAACGAGCAGGTGATTCGGCGCCCCGCGACGAGTGCC
CGAAGGCGACCCTCCGTCTGTCTAATTGCTTGCTTGACGCTTGATTTGCCTCGGGCGTACA-----CGGCTCAACTGTAC
TCTGTCTTGCTATGATCTTGATGGTTCCTAG------TACACCTTTTCCCTGTAAAATTGAGGTATTTTCACCAGAATCT
CCTACGCTTTCTGCAGGGTTTCATGTAGGGGAGGGCAACCTGTTCCCAGCCCTCGATTTCCGCCGGAGCGTGCGAAGTCC
AGTCGGCAGCAACGGCGACGCCGGTGCAGGCAGCCGCGGGCACGGCAATGCCGGTTCCTCTTGCCCCTTACCCAACTCCT
CCTGTGCCCTTCACACCACCCGCTCCCAATGCAGGTATGGTCGCCGGCTGGGTACTGCAAGAACGGAGACGGCTTTGGCA
ATCCTTTGATGCTCCCCTTTTTTGTTTTTTGAGAAACTATTATTTTGATTGATGTTTCTTGGCTACCCAGAAAACCAAGA
TGTTAACGGCATAACGCTCTGGCTTCTTCATGATTTTTGGACTAAAAAGTCTATAGGAGCTGATTTTTCATCTGCTA---
-----------TTTTTGTCTCCGAATTTCTGATAGAACAGAATAAGCCCGAGATA-----TCAATTAACCCATAGATGTT
TCTCTGCTGATTTTGCTGTTGCAATGCTTTTCTGAAATGTAACTTTTGGTTATTGGTAGGTGAGCTTCAGCAGCTGAAAT
TTCGTAACTAAGGTCCCATGCTTGTGCAATTTCAGGAGCTCAAAGCCAACTTGTCTGCTCTGGGTGCCGGAATCTGCTCA
TGTATCCTGCCGGCGCAACGTCGGTCTGCTGCGCAGTTTGCAGTACGGTGACCGCTGTTCCGGCTCCCGGTATGCACATC
AATCTCATTTTGCTCATCAAGGATTTGTAAGTAATGTGGCAGCTGAACATTGAGTTCCATATTTACAAGATTATTATTAC
TAGTATAGAAGACAGTAGTGTGCATTCTAATCGACTGTGAGAAGTTACATTAGCTGGAAACTATCCTCAAGTGCAGTTCT
CTGAACATATTTTCCACCCTGATTCGGTGTAGGGACTGAAATGGCGCAGCTAGTTTGTGGAGGATGCCACACTCTTCTCA
TGTACATACGCGGCGCCACAAGTGTACAGTGTTCTTGCTGCCACACTGTCAACCTGGCAATGGAAGGTACATCGACCAAA
GCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCCCGGG--TTGCAAGTGGTATATGCTGCTGGTTTTGA
TTCCCTTTTCAAAACGATGTTGACATTGATTCGTGTATGTAAAATCCTCCTTCTGAGCAGAATGTGTTCTGAGGTTGGAA
AAGCTCTAGCAATCAGTCGATAACCGTTAACATCGTAAAATTGGCTTATCCTGAAGTCGCACTCTTCAAAATTGGACAGT
AGGATGTATGCATTTGTTGTGATGCATAAAACAAAAGGTTTGACAAGGATCTCCCGGATCTACCAAAAAGTTTGATCAAT
A----TCTCCTAGTTTTACTATAAGTCTGACAAACATGTCCTACAGTTACTACTGAACGATTCACAAACACAAAGATTGA
AAGATACCACT---------------------------------------------------------------------
---------------AGCATTGGGTCCTGACTTCTGAAGATGCTCCACAGGTTCTAAGAACTCAGAAGGATGAGTGCATA
GAGCTGATGTGTGCTCATCAAATCTCAAATACTCTGAATGACAAATTCTATCTTGTGCTTGGCCGCAGCGAATCAGGTTG
CGCATGTAAACTGCGGGAGTTGTCGAATGCTGCTCATGTACCAGTATGGCGCGAGGTCCGTCAAATGTGCAGTCTGCAGT
TTCGTCACATCAGTTGGGGTAAGTGTTCATTATCAGAGCTGTTAATCCTAGCACGCGACAAGAGCATTTGCTCTTTTTCT
GGATTTTTCACATCTTTTAATTGTCATTGCTGTTGAGAGACCTGAATTTCACAACAACCATACCTGAAATGTGTTACTTC
TTACCCTTTTCAGGCATCATCGGGTGCAGAGCAAAAGCCCAGCAACTGAAGTTCTTCAAGTTCATACTGAAGGCAGCTTC
CCGCAATAAGAATGCTTTGAGTGCACATGTATAGAGTTCTTCCCAGAAGCAATCTCTTCCTCCCCTCTCCATTTCCCTCC
TTCGTTGGACCTGGCGAGCTTGCGGAATAAACAAGAGTTTTTGGTAATACATAGTGCTCGAAATTCGTCGAATCATCTGT
GTAACTGGATCAGACAGATATA-TGAACCCGCCATGTTTATGTTCAATTATATCCTCTTTTACTTGTGTTTTATTTCAGA
AA---------TTTTTTCTCCTTGTGGTTATCTGAAGAATTTCTGCCGATGCGCTTTTGTCGTGGCAATTCTTGAACCGA
ACAATATTATTACGGCCAACATGATCGTGAAAGTTCTCCCCAAAAAAAGAACAGTTCACTAACACATACAAA-TCCAAAT
GATGCATGATTAGGGTGCGCAAACACATCTTGAATGGT----------GACTCTGGCGCAGAGTTGATGTTGATTGCTAG
GG--CACAGGATTGGGTTAGTGTTGGGCACCATCTCTCTGACTCTTGTCCAACTCTGAATCTCCGATGGCATCTCCCAGC
CAGCGAGCAAACAGCTTATGGTGATACGATGGCATGTCATGCATCTGATCTGAGCCTGAGAAGGACTGTCAGTTCCTGAC
CACTCTATCAATGGACCCAATTATTGCCAGGAAAGGTGCGCGGAAAAGTTTAGAG-----AACACAATGATGT-AAAGGC
ATAGATGGTGCTCGGTCGCAGCAGCACTCAATGGTGCCTGCTGCTAGTAACAGTTCAGGGACATACTCGTACTACTGAAT
AGCAACATCACTATTCATGGG--------------------TTAGAATCATGTGGACCAAAGGAGCCCTAATGAGTCTAG
GGGCATACTGCAGGATTGGTGGGTATCTTAGCTGTTGTTATCTCATGGACCGGGACTTTGTGTGCACCAGGTGCACTGCA
TCAGTTTATAGTAAAAACTGAAAGATTTTTTTAAGGGGTAAAAAACTAAAAGA
>SNPs
--------------------------------------------------------S--------SS-------------
------------------S--S--SS-----------------------S------------------------------
------S-------------S----SS--SSSSS-S---------------------------------------S----
----------------------------------------------------S---S----S-------S-SS-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------S--------
-------S-----------------S-----------------S---------------------------S--------
--------------------------------------------SS----------------------------------
----------------------------------------------------SS--------------------------
---------------------------------------S-----------------------------S----------
-------------------------------------------------------------------------------S
----------S------------S---S----------------------SSSS-SSSSSSSSSSS--S-----------
-----------------------S-------SSSSSS---S---------------S-----------------------
----------------------------------------------------------S---------------------
-------------------------S------------------------------------------------------
--------------------S-----------------------------------------------------------
-----------S------------S-------------------------------------------------------
------------------------------------S-------------S-----------------------------
-------------------------S-----S-----------------S------S------------S----------
----------------S-----------------SS----------------S-S-----------------S-------
----------S----S------S-------------------------------------S-------------------
--------------------------------------------------------------------------------
--------------------------------------------S-----------------------S-----------
--------------------------------------------------------------------------------
---------------------------------------S--------------------S-------------------
---------------------------------------------------------------------S----------
----------------------------S----------------S----------------------------------
---------------------------------------S----S-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSS-----------------------------------------------------------------
---S-----------------S----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
---------------------------------------------------S----------S-----------------
---------------------S----------------------------------------------------------
----------S-----------------------------------------------------S---------------
------------------------------S-------------------------------------------------
----------------------S----------S-----------------------------S----------S-----
--------------S----S------S-----------------------------------------------------
---------S-------S-----------------------------------------S--------------------
------------------------S------------------------------------S-S----------------
------------S--------------S----------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------S-------------------------S-----------S------
-------------S--------------------------------------S-----S--------S------------
-----S------S-----S----SSSSSSSSSSSSSSSSSS---S-------------S--------S-----------S
-S----S--------------------SS--------------SS-----------------------S------S----
--S------SSS-----S---S-S--------S-------------SS-----
>forward_840
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------CATGCGGATCCGTCTCTTCT----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>reverse_2061
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------GGGATGCCACACTCTTCTCA
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>forward_1179
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------CTGTTCCCAGCCCTCGATTC---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>reverse_2649
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------ACCACTAAGCATTGGGTCCTG---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>forward_1741
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------CAAAGCCAACTTGTCTGCTCC-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>reverse_3582
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------CGGTGATGTTGATTGCCAT
GG------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
