>input_sequence_43364
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--------------------------------------------------ATGGCCGGCGACGACCGCCTGTCCGCGCTC
CCCGACCAGCTTCTCCGCCGCCTCCTGCACTTCGCCCCAGCCAAGGAGGCCGCCTCCACGAGAGCGCTCTCCCGGCGCTG
GCGCTCGCCGCTCTTGCGCTCCTCGGGGGCCGTAAATCTCGAGACGCACGTCGAACGCATAGAACGACTTTACCAAAG--
-CTGGGGAGAGGAGCGCAAGAGCCTGGAGGCCACGTTCTTCGCCCGGCGCGACGCCTTCGTCTCCGCGGCTCAGGCGGCG
CTCG---------CGGCGGCCGACCACGTCACGACGCTTACCCTGCGCGTGAAGTTCGAGTTTGGCGTCGAC---GGCAG
GTTCCTGCAATATGGCAGCGA---------CGGGTTGT---CGTCGCAGGACCAGGACCAAAGCGTGATCACCACGCTTC
TCTCCCACCCGGCGGCGCGAGGCGTCCAAGTCCTCCGGC---TCGCCGTGGAAGGCCGCTAC---------GACACCTAC
TACGAGCCAAAGAAGGAGATCGCCAGGAAAGTGGTAGGCGAGTACATGCTCAGCCTCGGCTTGCTGCCGTCGGAGACCCT
CCGCGTGCTCGAACTCACCAACTGCAGCAGCATCCTTCCACCGGCCGCCA--------CTGTCGTGTTCACCCGGCTTTC
ATCGATGCGGCTGCGGCATTGCACCGTGCGCCTCGATGCCCTCCAGAGCCTGTTCGATGCCGCGCCTGCGCTCGCCATCG
TCCACCTTGAGTCTGT---CGTCATCACCATTGGGCCAAGAGCCGACACGAGCGCGCCAGCCCACTG-------------
--------------------CTCCTCGGGCGATACTTCTCCC---CCACCACCAACAGAAGTAGTG---------CTCCA
ATGTCCGGCAGCCAGAGTGCTCGTGCTCCGGAGGTGCAGCTGGAGAGGG-------------------------------
-----AATGCTGACGGCAAGACCCCCGTCATCGTCGCCGTGGAGATCCACGCGCCGAGGCTGCGGCGCTTCGTGTACACG
GGGTTTCTCCGACGGTTCACGATGAGACCGCGGCCACCGGACTTGTCACGGGCAGACCTGCACCTTTTCTGGCCACGCGT
CGAGAAAACGTACGTGTATCC------ACGCGAGAAGCACCGCAGCGACGAGGATCCA---------------------C
ACCCCACCCTCGTGACCTTCTGGCGATTCCTCCAGGACCTAAGCAGCGTCAGGGAGTTGAAGCTGAGGGTGAACAACCTC
GAGGACATGGCGGTGCTCCGCGAGGCGAGGCGCGTCGAGCTCCTGCCCGCCTTCTCCAAACTCGAGCGGCTCGAGCTGCA
AGGAGTGCACAGGCCGAAAGGCAAGACCGCGTCGGTCGCGATCGCGAACCTGCTCCGCTGCTCCCCCGTGCTCGGCGATC
TTCGCATCAACCTTACCACGGCGCAACATGGTGCCATATTAAAGTATAACCGCATAGAAGGGTACGTGGAAACAAAGTTC
CTGTCTGACCGTGACAAGTCAATAGATCTTATCAACCG------------TGCAGAGCCGACAGTGGTTTCTCTGGAAGA
TGATGGCGATGTT---AACA---GTGGTGAGGTTTTAGATATCCCTGGCCTGAGTCGGCACTCGTTCGAATGCTTGCAGA
GCTCACTGAAGAGAGTGGGCTTGCAGTTCCGCTTGGAGGAGTCCAATTGTTTGGGTGTCAAGCTGATCAAATTCTTTGCC
GAGAATGCGACGGTTCTTGAAGAAATGCATATCGACAGCGGAAACAGGAAGTTGTGCGAGCATATGAACAACAAGCTTAA
AACTTGGATCGTCAGTTCATCCAAAAGGAGA---AAGTCAGAAGCCTCAAGCTTTATGGTTTTACCCCTTGAGTCAAGAG
AACTCTGCATCGAACGAGGATTTTGA------------------------------------------------------
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>chr3D_1_TraesCS3D01G448400
GCCGCCGGCGGGGAGATCCTGCAAGCGCCAAGGCGAAGCGATCGCAGCGCGGGGCAGGAGAAAACCCCCCACAGGACGGT
GTACTCTCCGTATCCACGAAAATTTTCTTCACAGCTGGAGCCAACATCGTCGCCATCTTCGTCATCTGTCGCATGGGGTG
AATGGTCGTCGGCGTTGGTCTCCGGAGGCTTCCGGCTGACGTCTTTAACCTCATATCGCCTAGCGTGGGCGGCCCGTTCG
GGGTGCTTGCAAATGGGGTCTCGGCCGAGGCGGAGGTCAAGCTCGAGGTCGGGGCCGGCATGCTTCAGGGCGTAAGTGAC
CCACTGGTCCACCGTGGTCTTTTGGTCGGAATCATATCCCAATCTCACTCCCAGGCAAACGCGGAGCGCACGCAGGGGCA
CCGGGCCGGGCGCGGGGGCCGGGCGGCGGCTGCGGCCAAAGAGGGCGCCGGTGACGACTGAGGACCACAGCGCCGGCGGG
TGATTTATGTACTCGGTGGAATACATATAGTCGTCGTCCACCTCGTCGTAGATGATGGGCTGTTTCGGCCGCTCATCCAT
GTCCAGGGAGACGGTGTGGACGATGGCCAGAACGTCGCGCCACCGCCTCGAGAGCGCCGCGGCACGCCCGATCTCGTCGG
CGTCGAGGAACGAGAGGATATGGCCAAGCACGACATCGCCGAGACTGCTCAGACGGTCGTCGCGCTC------GCGCTCC
CGTTCGACGATCTGGTGCGAGTGACTCGTC--GTCGCGCTCCCGTTCGACATCGCGGCTGGCGGCGGCGATCTCAGGATC
TCGATCGGAGATGCCGTGTGGAGGATTAGAGATCGGTTTATAACCGACG-TTGCGTCGTTGCCTGCTCAAATACGTAAAC
GTATTTTTTTTTCTTTCGGAAGAAAAAAAAGTATTTCT-CCCTACGTACCGATCCGATCCCTAAACCCTAATTCCCTATC
CCATCCCATCCCATCGAGAACGTGATCGCATCGAGCCGCGGACGTGGAGGATGGCCGGCGACGACCGCCTGTCCGCGCTC
CCCGACCAGCTTCTCCGCCGCCTCCTGCACTTCGCCCCAGCCAAGGAGGCCGCCTCCACGAGAGCGCTCTCCCGGCGCTG
GCGCTCGCCGCTCTTGCGCTCCTCGGGGGCCGTAAATCTCGAGACGCACGTCGAACGCATAGAACGACTTTACCAAAG--
-CTGGGGAGAGGAGCGCAAGAGCCTGGAGGCCACGTTCTTCGCCCGGCGCGACGCCTTCGTCTCCGCGGCTCAGGCGGCG
CTCG---------CGGCGGCCGACCACGTCACGACGCTTACCCTGCGCGTGAAGTTCGAGTTTGGCGTCGAC---GGCAG
GTTCCTGCAATATGGCAGCGA---------CGGGTTGT---CGTCGCAGGACCAGGACCAAAGCGTGATCACCACGCTTC
TCTCCCACCCGGCGGCGCGAGGCGTCCAAGTCCTCCGGC---TCGCCGTGGAAGGCCGCTAC---------GACACCTAC
TACGAGCCAAAGAAGGAGATCGCCAGGAAAGTGGTAGGCGAGTACATGCTCAGCCTCGGCTTGCTGCCGTCGGAGACCCT
CCGCGTGCTCGAACTCACCAACTGCAGCAGCATCCTTCCACCGGCCGCCA--------CTGTCGTGTTCACCCGGCTTTC
ATCGATGCGGCTGCGGCATTGCACCGTGCGCCTCGATGCCCTCCAGAGCCTGTTCGATGCCGCGCCTGCGCTCGCCATCG
TCCACCTTGAGTCTGT---CGTCATCACCATTGGGCCAAGAGCCGACACGAGCGCGCCAGCCCACTG-------------
--------------------CTCCTCGGGCGATACTTCTCCC---CCACCACCAACAGAAGTAGTG---------CTCCA
ATGTCCGGCAGCCAGAGTGCTCGTGCTCCGGAGGTGCAGCTGGAGAGGG-------------------------------
-----AATGCTGACGGCAAGACCCCCGTCATCGTCGCCGTGGAGATCCACGCGCCGAGGCTGCGGCGCTTCGTGTACACG
GGGTTTCTCCGACGGTTCACGATGAGACCGCGGCCACCGGACTTGTCACGGGCAGACCTGCACCTTTTCTGGCCACGCGT
CGAGAAAACGTACGTGTATCC------ACGCGAGAAGCACCGCAGCGACGAGGATCCA---------------------C
ACCCCACCCTCGTGACCTTCTGGCGATTCCTCCAGGACCTAAGCAGCGTCAGGGAGTTGAAGCTGAGGGTGAACAACCTC
GAGGACATGGCGGTGCTCCGCGAGGCGAGGCGCGTCGAGCTCCTGCCCGCCTTCTCCAAACTCGAGCGGCTCGAGCTGCA
AGGAGTGCACAGGCCGAAAGGCAAGACCGCGTCGGTCGCGATCGCGAACCTGCTCCGCTGCTCCCCCGTGCTCGGCGATC
TTCGCATCAACCTTACCACGGCGCAACATGGTGCCATATTAAAGTATAACCGCATAGAAGGGTACGTGGAAACAAAGTTC
CTGTCTGACCGTGACAAGTCAATAGATCTTATCAACCG------------TGCAGAGCCGACAGTGGTTTCTCTGGAAGA
TGATGGCGATGTT---AACA---GTGGTGAGGTTTTAGATATCCCTGGCCTGAGTCGGCACTCGTTCGAATGCTTGCAGA
GCTCACTGAAGAGAGTGGGCTTGCAGTTCCGCTTGGAGGAGTCCAATTGTTTGGGTGTCAAGCTGATCAAATTCTTTGCC
GAGAATGCGACGGTTCTTGAAGAAATGCATATCGACAGCGGAAACAGGAAGTTGTGCGAGCATATGAACAACAAGCTTAA
AACTTGGATCGTCAGTTCATCCAAAAGGAGA---AAGTCAGAAGCCTCAAGCTTTATGGTTTTACCCCTTGAGTCAAGAG
AACTCTGCATCGAACGAGGATTTTGATGCAGCATACTCTTTTCTCAAGTATTCATCGTTAATACAGGGAGGACGTCCTGA
GGTATCTAGCTTCTCCCTAGCTGCTTGGCCACTGATAAAATTTCTGGGGGACATG-------------------------
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----------------------------TAATAGGTTAGTTTTGCTCTCTAATGTTCCAAG-------------------
-----------------------------TAATACAGGAAACTATGTATAGT----------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------CTCAAAACTACTCCCTCCGTCC
TATAATATAAAAGCATTTTTAAGGTAATTAAGTCCAAGGTTCAA-CTATATGCAGAAAGTCCCATCTCTGGATGGTGCTC
TCTGCCGGACTACTTAACTATTCTTTTTGGAGATTATATTGGCTGAGTTTCTCAGATATAAAGAGCACAATACTTAGATA
AATATTGTATATTGTCTTTAAATTTCCTTAGAAATATAGTTATTTAAGAAAATAACTAGTTTCTAATTTCTCTATGAAAA
CATGTACAAGTTTATTTCTTTGCCAATGTGGTCATATATGGGCCATCTTTATTTCATACTGTCTACGTGTTTCTAAAATG
TCATTTTTTGCCACATGAGTACTATAGTTCAGGAGAGATGACAACTTTTTTATGAAAAAGGAATTTTTTTTATTGATTCT
TTATGATAT----GGAGATGCCACGAAGCACACGTGGATTAAGTGGATACAGACGATAGAGCAAATAATAACATTCGTGG
ATGAATTTTGGCAGTGTTGTTTCTGTCTAATTCATGTGTGAGCAA-ATCTTACACAGAATGCTAAAATTCTTACGTTGTC
A-ATGTTGTTTGTAGTCATGCTTAGCATAGGTGTCAGATGTTGTTATGAATTGTATAACGTTGTCTTACTGCATAATAAA
CTCATTACTAAACATATAGATAATTCATCTAATGTGCATAGTCCTTTGCCTTATGGTGTTTCTATGCATT---TCAACAA
AGTAAACTTGGGAGCAATTGGCCTACAAACCAGACAAAACCCAAAACAAAAGGAGAGCGGCGTGACAGAAACATGTAGAG
CATCTAATTGCTAAAAATGTTCC
>chr3B_1
GCCGCCGGCGGGGAGATCCTGCAAGCGCCAAGGCGGAGCGATCGCAGCGCGGGGCAGGAGAAACCCCCCCATGGGACGGT
GTACTCTCCGTATCCACGAAAATTTTCTTCAGAACTGGAGCCAACATCGTCACCATCGTCGTCGTCTGTCCCAAGGGGTG
AATGGTCGTCGGCGTTTGTCTCCGGAGGCTTCCAGCCAACGGCTTTAACCTCGTATGGCCTAGCGTGGGCGGCCCGGTCG
GGGTGCTTGCAGATGGGGTCTCGGCCGAGGCGGAGGTCGAGCTCGAGGTCGGGGCCGGCATGCTTCAGGGCGTAAGTAAC
CCACTGGTCCACCGTGGTCTTTTGGTCGGGATTGTATCCCAATCTCACTCCCAGGCAAACGCGGAGCGCACGCAGGGGCA
CCGGGCCGGGCGCGGGGGCCGGGCGGCGGCTGCGGCCAAAGAGGGCGCCGGTGACGATTGAGGACAGCGGCGCCGGCGGG
TGATTGATGTACTCGGTGGAATAGATCAAGTCATCGTCGACCACGTCGTAGATGATGGGCCGTTTCGGCTGCTCATCCAT
GTCCAGGGAGACGGTGTGGACGATGGCCAGGACGTCGCGCCACCGCCTTGAGAGCGCCGCGGCACGGCCGATCTCGTCGG
CGTCGAGGAAGGAGAGGATATGGCCAAGCACGACATCGCTGAGACTGCTGAGACGGTCGTCGCGCTCGCGCTCGCGCTCC
AGTTCGACGATCTGGTGGGAGTGACTCATCTCGTCGCGCTCCCGTTCGACACGGCGGCTGGCGGCGGCGATCTCAGAATC
----TCGGAGATGCCGTGTAGAGGACTAGAGATCGGTTCATAACTGACGTTTACGTCGTTGCCTGCCCAAATACGTAAAC
GGATTTTTTTTTCTTTGGCAAGAAAAAAAGGTATATCTCCCCTACGTACCGATCCGATCCCTAAACCCTAATTCCC----
-CATCCCATCCCATCGAGAACGTGATCGCATCGCGCCGCAGACGTGGACGATGGCCGTCGACGACCGCCTGTCCGCGCTC
CCCGACCAGCTTCTCCGCCGCATCCTCCACTTCGCCCCGGCCAAGGAGGCCGCCTCCACGAGAGCGCTCTCCCGGCGCTG
GCGCTCGCCGCTCTTGCGCTCCTCGGGGGCCGTAAACCTCGAGACGCACGTCGAGCGCATAGAACTACTCTACCAAAG--
-CTGGGGAGAGGAGCGCAAGAGCCTGGAGGCCACGTTCTTCTTCCGGCGCGACGCCTTCGTCTCCGCGGCCCAGGCGGCG
CTCG---------CCGCCGCCGACCACATCACGACGCTTACCCTGCGCGTGAAGTTCGAGTTTGGCGTCGAC---CGCAG
GTTCCTGCAATACAACAGCGA---------CGGGTTGTGCTCGTCGCCGGACCAGGACCAAAGCGTGATCGCCACGCTTC
TCTCCCACCCGGCGGCGCAACACATCCAAGTCCTCCGGC---TCGCCGTTGAAGGCTGCAAC---------GACACCTAC
TATGAGCCGGAGAAGGAGATCGCCCGGAAAGTGGTAGGCGAGTACATGCTCAGCCTCCGCTTCCTGCCGTCGGAGACCCT
CCGCGTGCTCGAACTCACCAACTGCAACAGCATCCTTCCACTGGCCACCA--------CAGTCGTGTTCACCCGGCTTTC
ATCGATGCGGCTGCGGCATTGCACCGTGCGCCTCGATGACCTCCAGAGCCTCATCCACGCCGCGCCGGCGCTCGCCACCA
TCCACCTTGAGTCCAT---CGTCATCACCATCGGGCCAACAAACGACACGAGCGCGGCAACCCACCG-------------
--------------------CGCCTTGGACGATACTTCTCCC---CCACCACCGACAGAAATAGTG---------CTCCA
ATGTTCGGCGGCCATCGTGCTCATGCTCCGGAGGTGCAGCTGGAGAGGG-------------------------------
-----AATGATC---ACGAGACCCCCGCCATCGTCGCCGTGGAGATCCATGCGCCGAGGCTGCGGCGCTTCGTGTACATG
GGGCTTCTCCGACGGTTCACGATGAGCCCGCAGCCACAGGACTTGTCACGGGCAGACCTGCACTTTTTCGGGCCATGCGA
CAAGAAAAGGTATGTGTATCC------ACACCGGAAGCACCCTAGCGAGGAGGATCCA---------------------A
ATCCCAACCTCGTGACCTTCTGGCGATTCCTCCAGGACATAAGCAGCACCAAGCAGTTGAAGCTGAGGGTGAACAACCTC
GAGGACATGGCCGTGCTCAGCGAGGCAATGCGCGTCGAGCTCCTGCCCGCCTTCTGCAACCTCGAGCGGCTCGAGCTGCA
AGGAGTGCACAGGCCGAAAGGCAAGACCGCGTCGGTGGCGATCGCGAACCTGCTACGCTGCTCCCCCGTGCTCCGCAATC
TCCGGATCAACCTTACCACGGCGCAACACGGGGCCATACTAAGGTATGACCGCATAGAAGGGTACGTGGAAACAAAGTTC
CTATCTGACCGTGACAAGTCAGTAGATCTTATCAACCG------------CGCAGAGCCGACAACAGTTTCTCTTGAAGA
TGATGGCGATGTT---AACA---GTGCTGAGGTTTTAGATATCCCTGGCCTGAGTCGGCACTCGTTCGAATGCTTGCAGA
GCTCACTGAAGAGAATGAGCTTGCAGTTTCGGTTGGAGGAGTCCAACTGTTTGGGCGTCAAGCTGATCAAATTCTTTACC
AAGAACGCGACCGTTCTTGAAGAAATGCATATCGACACTGGAAACAGGAAGTTGTGCGAGCATATGAACAGCAAGGTTAA
AACATGGATCACCAGTTCATCCAAAATGAGA---AAGTCAGGAGCCTCAAGCTTTATGGTTTTACCCCTTGAGTCAAGAG
AACTCTGCGTCCAACGAGGATTTTGATGCAGCATACTCTTTTCTCAAGTATTCATCGTTAATACAGGGATGATGTCCCGA
GGTATCTAGCTTCTCCCTAGCTGCTTGGCCACTGATAAAATTTCTGGGTAAGATGTAAAGGGCATGAACTATGATGAGAA
AAAAAAATTGAGGCACCTATATTAAATTTTCTCTCCCATGCAAGCTCCATTAGTGGACATCATCAACGAAATAAAAAATA
AAAACTTTAGTACACATGCATCTCTTCTCTTTACTTTATTCTTTTTGTTTTTTACATGGGACCACACTTTTCCCCAAGCA
CCCGGCTATTGCAGAGGATCCCACTTCCCCATCATAACCTATTTCTCCTGACTCCGATCCTACATGGCATGTGAGGCATC
ACCCAGAGGCTATGCATTGGCCATATCCTAATAGGTTAGTTTTGCTCTCTGATGTTCCCTTTTTCGATGTTGTTCTGCTT
TGGTGTGGTGGTCCCTATTTTCTCTAAAATAATACAGGAAACTATGTATAGTATTTTTTTATACTTAAAAAATGAGTTTG
AGTCTACTACTTTGCAATTTTTGTTATTATATTCACTAAAATTCATCCTTAAATAAGTGGTTATTTTGCCGAACTGAAAT
TCAAAACTCATTGGTGGCAGCTGCTGAAATACTTTATTTTTACTTGATCTGAAATAGTCTCAAAACTACAAAGC------
-------------------------AATTAAGTCCAAGGTTCGACCTATATGCAGAAAGTCCCATCTGTGGATGGTGCTC
TCTTTCGGACTACTTAACTATACTTTTTGGAGACTATATTGGCTCAGTTTCTCAGATATAAAGGGCACAATACTTAGATA
AATATTGTATATTGACTTTAAATTCCTTAG--AATATTGTTATTTAAGAAAATAACTAG-TTCTAATTTCTCTACGAAAA
CATGTACAAGTTTATTTCTGTGTGAATGTGGTCATATATCGGCCGTCTTTATTTCATAGTGTCTAAGTTTTTA-AAAATG
TGGTTTTTTGCCACACAAGTACTCTAGTTCCGGAGAGATGACAACTTTTTTATGAGAAAGGAATTTTTTT-ATTGATTCT
TTGTGATACAGAGGGAGATGCCACGAAGCGCACATGGGCGGAGTTGATATAGACGATAGAGCAAATAATAACATTCGTTG
ATGAATTTTGGCAGTGTTGTTTCAGTCTAGTTCATGCGTGAGCAACATCTTACACAGAATGCTAAAATTCTAAAGTTGTT
AGATGTTGTTTGTAGTTATGTTTAGCGTAGGTGACATATGTTGTTCTGAATTATATAAAGTTGTCTTACTTCATAATAAA
CTCATTACTAAACATATAGATAATGCATCTAATGTGCATAGTCCTTTGTCTTATGGTTTTTCAATGCACTTCATCAACAA
ACTAAACATGGGAGCAATCGGCCGACAAGCCAGACAAAACCCAAAACAAAAGGAGAGCAGCGTGATGGAAACATGTAGAT
CATCTAATTGCTGAATGTTCC--
>chr3D_954
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---TCCCATCCGATTCAGATCGTGATCGCATCGCGCCGCGGACGTAGACGATGGCCGGGGACGACCGCCTGTCCGCGCTC
CCCGATCAGCTTCTCCGGCGCGTCCTCCACTTCGCCCCAGCCAAGGAGGCCGCGTCCACGAGAGCGCTCTCCCGGCGCTG
GCGCTCGCCGTTCTTGCGTTCCTCGGGCGCCGTAAACCTTGAGACGCGCCTCGAGGACTTCGACCGCACGCTCTCCAGTA
CCTGGGGGGAGCAGCGTAAAACCCTAGAGGCGTCGTTCTTCTCGCGGCGCGACGCCTTCGTGTCGGCGGCCAAGGCGGCG
CTCGA---------CGCCGACGGCCACGTCACCAGGCTCACCCTGCGTGTGGAGTTCGAGTTCGGCATCAAA---CGCTG
GCTCCTGCACTCTGACAACGACAAGAGGGACGGGTCGC---GGTCGCAGGACCACCA------CGTGATCGCCACGCTTC
TCTCCCACCCGGCAGCGCGACGCGTCGAGGATCTCCGGC---TCGCCGTCGAAGGCTGGGTCATCCGCACTGACACCTAC
TATGACCCCGAGAGTGAGATTGCTCGGAAAGCGGTAGGCGACTACACGCTCAGCCTCGGCTCCCTGCCGTGGGAAACCCT
CCGCGTGCTCAACCTCACCAGCTGCGACA---TCCTTCCACCGGCCGCCA--------TAGTAGGGTTCACGCGGCTTTC
GTCCATGCGGCTGCGGCATTGCGCCGTGCGCCTAGGTGTCCTCCAGAGCCTCGTCGACGCCGCGCCGGCGCTTGCTACCG
TCCACCTTGAGTCCGTCGCCGTCATCGTCATTGCGCCAACAGACGACGTCAGCCCGCCCAGCCACCA-------------
--------------------CGCATCGGCCGGTACTTCTCCCCGGCCACCACCGACAGAAGTAGTG---------CTCCG
TTGTCCGGCGGCCACCGTTCTCGTTCTGGACAAGTGCAACTGGAGAGGG-------------------------------
-----AATGATAAAGACGAGACTCCGGTCGTCGTCGCCGTGGAGATTCGCGCGCCGAAGCTGCGATCCTTCTTGTACAGG
GGGCTTCTCAGACGGCTCTCAATGAGCCCGCGGCCACCGGATTTGGCACGGGCGGACCTGCACTTTTTCCGGCCATGCGA
CAAGAAAGGAAACAAATGTTCACGCAGACGCAGGGAGCACCATAGCGACAAAGCCAACGAGGATCCAGATCCACACCGCA
ACCTCAACCTCATGACGTTGTGGAAATTCCTCCAAGACCTCAGCAGGGCCAAGGAGTTGAAGCTGAGAGTGAACAACCTC
GAGGACATGGCCGTCCTCAGCGAGGCGGGGCGCGTCGAGCTCCTGCCCGTCTTCTCCAACCTAGACCGGCTCGAGCTGCA
AGGAGTGCACAGGCCCAAAGGCAAGTCTGCGGCGGTGGCGATCGCAAACCTGCTCCGCTGCTCCCCCGTGCTCCGCCATC
TCAGGATCAACCTCACCACGGCGCACCACGCTGTCACAAGAGAGTCGGAAGACATAATAGGGTACCTAGAAACAAAGTTC
CTATGTGACCGCGACAAGTCCATAGATCTTATCAACCG------------CACAGATCCGACACCAGTTTCTCTCGAAGA
TGATGGTGATGTT---AACG---GTGCTAAGGTTTCTGATATCCCTGGCTTGAGTCGGCGCTCATTCGAATGCTTGCAGA
GCTCACTGAGGAGAGTGGGCTTGCAATTTCGGTCGGAGGACTCTAACTGCTTTGGCATCAAGCTGATCAAATTCTTCGCT
GAGAATGCCATGGTTCTTGAAGAAATGCATATTGACGGCGGGAACGGGAAGTTGTGGGAGCATATGAACAACCCGGTTGG
AATATGGGCCGCAAGTTCATCCGAAAGGAGA---AAGCGAGGAGCGTCTAACTTTGTGGTTTTACCCCTTGAGTCAAGAG
AACTCTGCAATGAATCAGAAATTTGATACAGTATA---------------------------------------------
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>chr3B_981
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------------------------------TCGCGCAGCCGACGCAGACGATGATCGGCGACGACCGGCTGTCCGACCTC
CCCGACGACCTTCTCCGGCGCGTCTTGCACTTCGCCCCAGCCAAGGAGGCCGCCTCCACGACCGCGCTCTCGCGGCGCTG
GTGCACGCCGCTCTGGCGCTCCACCGGCGCCGTAAACCTCGAGTCGCGCGTCCACGACAACGACCGCCACCACCACCGCC
GCAACATCGACAGACGAGATGACGAGGCCGGATTTGTGT---CCCGGCGCGAAGCCTTCGTCTCCGCGGCCATGGTGGCG
CTCGACGCCGCGGCCGCCGACGACCACGTCACCAGACTCACCTTACGCCTCAAGTCTGACAGCGACGCCACGGTTGCCGA
GTTCCTGAACGGCAGCTCCGA---------CAGGTATG---AGACGCCTAAGG------AAAACTTGGTCGACGTGGTGC
TCGCCCACCCTGCGGCGCTGCGCGTGGAGGAAATCCGGCTGGTCGCCAAAGAATGGAGGAGC---------GACGCGTAC
TATGATGCG-------AGATCATCTGGGATCGGATAGGCGCCTACAAGCTCACCCTCGACAAGCTGCCGTGGGAGACCCT
CCGCGTGCTGGATCTCACCAACAGTCAGGGCCTCTACCAGCCGAAGAAGGCCGCCGCGCTGTGGTGCTCCCGAGGCTGTC
GTCGCTCAGGCTGCGGCATTGTGGTCAGCACCTTGTCTCTCTCCAGAGCATCATCGACGCCGCGCCGGTGCTCGCCGCTG
TCCGCCTCGAGTCCGT---CCTGATCGACGCAACAAACCACGACAATTGCTGGGGCTGCGGTAACAAGATCGACCGCTGG
GCCGGCAGCGATGAAGACGACGACGACGACGATGCACCTCAA---TCGCCGCCCAAAGAAGCTGCACCCTGCCGCCTCCG
ATGCCCAGCGGCCACCCTGCTCGTGCTGGAGAGGTGCAAGTGGGAGGAGAAGGAACATGGGCGCCACGGCCACTCGTACC
GTGACAACGATGACGACAAGCTTGTCAACCTGATCGCTGCGGAGATCGAGGCGCCGAGGCTGCGCCGCTTCAGGTACAAG
GGATATCTCCGGCCGTTCTCATTCAGTTCACAGCCACCGGAGTTGGAACAAGTGGACCTCGATTCTTTCCCGTGCGACGA
CGACGAGAACCACAAGA------------------------------ACAAGGAACCA---------------------A
ACCGCGTCCTAGCGACCATCTGGCGATTGGTTCGGAGCTTCACCAGCGCCAGGGAGATGAAGCTAAGGCTGAACCACCTC
GAGGACATCGCCGTCCTGAGAGAGGCAAGGCAGGTCGAGCTCCTGCCTGCATTCCGCCGCCTCGAGCGACTCGAGCTGCA
AGGGGTGCACAGGCCGAAAGGCAAGACCGCGTCGGTGACGATCGCGAACCTGCTCCGCCGCTGCCCCGTGCTTCTTGACC
TCTGGATCAACCTCACTGCGGAGGACCAAAACGCCCGCAAAAATTATCAGCACGCACATGAATTCTTCGAAAGGAAATTC
CGGTATGACCGTGACAAGTCCAAGGATCGTCTTGACCACTGCTGCCGCGACTCGGAGCCTGACACGATTTCGCCGGAAGG
AGAAGGCGATGGTGTTAATTACTATGACGAAGTTTCTGAAATTCCTGCCTTGAGTCGACACTCGTTCGAATGCTTGCAGA
GCTCACTAAGGAGAGTGTGCCTGCAATTCCAGTTGGAGAAGTCCAACTGTCTCGGTCTCCAGCTGATCAAATTCTTCGCC
GAGAACGCCATGGTCCTTGAAGAAATGCATATCGATGTTGGGAACGGGAAGCTGTGGGAGCACATGAATAGCAAGATCGA
AACATGGATAGCCAATTCATGCAAA---AGAAATAAGCCAGGAGCGTCAAG-----------------------------
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>chr3D_2064
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--------------------------------------------------AGGAACCA---------------------A
ACCGCATCCTAGCGACCATCTGGCGATTGGTTCGGAGCTTCACCAGCACCAGGGAGATGAAGCTAAGGCTGAACCACCTC
GAGGACATCGCCGTCCTCAGAGAGGCGAGGCGGGTCGAGCTCCTGCCTGCATTCCGCCGCCTCGAGCGACTCGAGCTGCA
AGGGGTGCACAGGCCGAAAGGCAAGACCGCGTCGGTGACCATCGCGAACCTGCTCCGCCGCTGCCCCCTGCTTCGTGACC
TCTGGAGCAACCTCACAGCGAAGGACCAAGAGGCCCGCAAAAATTATCAGCACGCACATGAATTCTTCGAAAGAAAATTC
CGATACGACCGTGACAAATCCATGGATTGTCTTGACCATTGCCGCCGCGACTCGGAGCCGGACACGGTTTCCAAGGAAGG
AGAAGGCGATGGTGCTAACA---ATGACGAAGTTTCTGAAATTCCTGGCTTGAGT---CGCTCGTTCGAATGCTTGCAGA
GCTCACTGAGGAGAGTGTGCCTGCAATTCCAGTTGGAGAAGTCCAACTGTCTCGGTCTCCAGCTGATCAAATTCTTCGCC
GAGAACGCCATGGTCCTTGAAGAAATGCATATCGATGTTGGGAACAGAAAGCTGTGGGAGCACATGAATAGCAAGGTCGA
AGCATGGATAGCCAATTCATGCAAA---AGA---AAGCCAGGAGCGCCAAGCTTTGTAGTCTTACCCCT-----------
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>SNPs
-----------------------------------S---------------------------S-------SS-------
-------------------------------S-S-----------------S-----S-----S------S--S------
----------------S----------------S--SS---S----------S---S-------------------S---
-----------S--------------------------S--------------------------------------S--
-----------------------------S--SS----------------------------------------------
---------------------------------------------------------S-------SS-S-----------
-----S-----------------S--SS----S-----S---S-----------------S--------S----------
------------------------------S-----------------S-----------------S-------------
----------S----------------------------S---------S------------------------------
S----------------S---------S-----------------------SS-----------------------S---
SSSS---------------S-----S------------S-----S-------S-------------S-------------
-S--------------S-S----------S----S-----------------------------------------SSSS
S--------------------------------S--------------S-------------------------------
---------------------S----------------------------------------------------------
------------------------------------S-----------------S--------------S----------
-----------------------------------------S----------------------------S---------
--------------S--S--------------------------------------------------------------
----------------------------------------------------------------------S---------
--------------------S----------------------------S------S--S--------------------
--S-----SS--------------S-------------------------------------------------------
--------------------------S-----------------------------------------------------
---------------------------------------------------SS----S--------S----------S--
-------------S-------------------------S--S----------------------S--------------
---------------------S------S------------------------S--------------------------
---------S----SS----------------------------------------------------------------
---------S-----S--------------------------------------------------------------S-
--------------------------S------------------------------------S-----S-----S---S
--------S----------------------SS--------SS------------------------------------S
------S-----------------------------------------S-------------------------------
-----------S------S----------------------------------------S--------------------
------------------------------------S------------------------------------S------
-S--S-----------------------S---------S--------S--------------------------------
--------------------------------------------------S------------SS---------------
--------------------------S-----------------------------------------------------
-------------------------------S--------------S---------------------------------
---------------------------------------------------------------------------S----
---S-------S-----------------------------S--------------------------------------
---------------------------------------------------------------------S--S----S--
------------------------------------------------SS-S----------------------------
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--------------------------------------------------S-------SSS-------------------
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---------------------------------------------------------------------SSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSS-----------------S------------------------S------------
---SS----------------S-----------S----------S------------------S----------------
--------------S---------S-S-SSSS-----S---------------------S--------------S-----
-------------------S--SS---------------S----S-------------S------S--S---SS------
-SS------------SS------S------S------------------------S--------------S---------
--S-----S--------------------S---S---SSSS---S----S----------------------------S-
-----------------------S-----S------S----------------------------------S-S-----S
----------------S---S-----S------S--S--------S------S-----S-----------S---------
------------------------S-----------------------S--------S----S-----S-----------
-S-----S----------S----S----S-----------------------------S------SS------------S
------------S--SS-SSSSS
>forward_144
--------------------------------------------------------------------------------
--------------------------------------------CATCGTCGCCATCTTCGTCA----------------
--------------------------------------------------------------------------------
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-----------------------
>reverse_1774
--------------------------------------------------------------------------------
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-------------TGTCGTCATCACCATTGGGC-----------------------------------------------
--------------------------------------------------------------------------------
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-----------------------
>forward_1523
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------------GCCGCTACGACACCTAC
TAC-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------
>reverse_2482
--------------------------------------------------------------------------------
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-TCGCATCAACCTTACCACGG-----------------------------------------------------------
--------------------------------------------------------------------------------
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>forward_1894
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----------------------------------ATACTTCTCCCCCACCACCA--------------------------
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-----------------------
>reverse_4408
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-------TTGGGAGCAATTGGCCTACA-----------------------------------------------------
-----------------------
