>input_sequence_43350
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-------------------ATGAG-GCCCAATTACGTTAGCGAAAATGAGGCCTGCACAGCCAACGGGC-TTCGTAGTCT
CGTAG-------AAAAAAACTCCGAGGCTCCGAGGTCTCCACGCCTCCACCGCCCCACTCACAACCTTATCGTCGCCGCG
GTACGAGCACAGATGGCGCCGCCGGCAGCAGCGCCGCCTGCCGCCATGTCCGCCCTCCCCACCTTCGCCTCCTCCCACCC
ATACCCTTCCCTCCCCACTCCCAAAACGGCCGCCCCCAAACCACGCCTCACCCTGGCCTACGCCGGCGCCGCCGCGGCTC
CCAATGCCGTCCCCCACCGCAGCGCCGCCGCCTCCAACGACCGCCTGCGAGGCCTGGTCCGCCGCGGCGACCTCGAGGAG
GCCCTCCGGCTCGTCGATTCCATGGCG------------TCCGCCGCCTTCGCCG---CGGGGCCCTGCGCCGCGCTCAT
CAAGAAGCTGTGCGCGTCCGGGCGCACCGCGGAGGCCCGGCGCGTGCTGGCGGCCTGCGAGCCCGACGTCATGGCCTACA
ACGCGATGGTCGCCGGGTACTGCGTCACGGGGCAGCTCGACAACGCGCGCCGGCTCGTCGCGGCGATGCCCATGGAGCCC
GACGCCTACACCTACAACACCCTCATCCGCGGCCTGTGCGGGCGCGGCAGGACCGATAACGCCCTCGCGGTGCTCGACGA
TATGCTCCGCCGGGGGTGCGTGCCCGACGTGGTCACCTACACCATCCTGCTCGAGGCCACCTGCAAGAGGAGCGGGTACA
AGCAGGCCATGAAGCTGCTCGACGAGATGCGCGACAAGGGGTGCGCCCCGGACATAATCACCTACAACGTCGTCGTCAAC
GGCATTTGCCAGGAGGGGCGAGTGGATGATGCCATGGAGTTCTTGAAGAGCCTGCCGTCCAACGGATGCGAGCCGAACAC
CGTCAGCTACAACATTGTGTTGAAGGGCTTGTGCACCGCGGAGCGGTGGGAGGACGCCGAGAAGCTCATGGCTGAGATGA
GTCGCAAGGGGTGCCCCCCGAATGTGGTGACATTCAACATGCTCATCAGCTTTTTGTGCCGGAGAGGATTGGTCGAGCCT
GCGATGGAGATTCTTGATCAGATCCCAAAGTACGGGTGCACGCCCAATTCATTGAGTTACAACCCGATACTTCACGCGTT
CTGCAAGCAAAAGAAGATGGACAGAGCCATGGCGTTTGTGGAACTGATGGTGTCCAGCGGCTGTTACCCCGACATTGTCT
CATACAACACTCTTCTTACTGCGCTGTGTCGTGGTGGGGAGGTTGGTGCCGCCGTTGAGCTGCTTCATCAACTCAAGGAC
AAAGGGTGCACCCCTGTCTTGATTAGCTACAACACCGTCATCGATGGCCTTACCAAAGCCGGCAAGACAGAGGAAGCTTT
AGAGCTGCTGAATGAGATGGTAACCAAAGGGCTCCAGCCGGACATAATCACTTACTCGACAATATCTTCTGGTCTTTGTC
GGGAAGACAGAATCGAAGAGGCGATCAAAGCATTTTGTAAAGTGCAGGACATGGGCATAAGGCCCAACACTGTGCTGTAC
AACGCGATACTTCTTGGGCTTTGCAAAAGGCGCGAGACACACAGTGCTATCGATCTGTTTACTTACATGGTGTCAAATGG
CTGCATGCCAAATGAATCAACCTACACTATATTGATTGAAGGCTTGGCTTACGAAGGCTTGGTCAAGGAGGCACGGGAAA
TGCTGGCTGAGTTGTGCTCCAGAGGGGTGGTGAGTAAGACTTTGGTAAATAAGGGAGCCATTCGGTTACTTGATGCTTGA
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>chr1D_1_TraesCS1D01G061400
TGAGGGTTGGCGACGGAGCAGAGGCTGCCCAGGCCGTCGCCGGCAAGTAGGAGGGCGCAGGATACGNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNGTCACATGAGGCGAAGCCACTGGCCACCGCAGATGAGCGCCGTCGGTCGGCGAGGAAAGAGAA
ACTG-----TCGTTGAAGAACTCGTCGTTCTGGGCTGCCAGGCCGCCTTTACACATGGGCCTCATCTACGTGCAGCCCAA
CCGACATTTCTTACCAGCATTGTTCAGTCTCGTTCGTTGCCCTTTTTCGAAGCAAGTCAACAGACTTCACTCCATACTGC
TCAAAAAACAAAATTCACTCCATACGAAGATACCGTTCATTCAAGTTTTATTTGGGCACATTTAGCATGCCTCAAATTCA
TTTTCCCTTTCAATTACTCTTCTTTT---GTATGAATTTCGCACGGGGAACTTTTATAGGAGAAGTTTGAATTCGTTCTA
TTCGGATCA------GTCTTGGTTCAAAATGGTTTAAT------------------------------------------
---AATTGCCTACATAATTTGGGCAGCCTTTGATATTTCTTTTAAGCAAAGGGCAGCCTTTTCTTTTTGGGTATATCCTT
TGCTCTCTTTTTTGAGACATTGGGTATATCCTTTGCTAAAGCTTTTTTCTTTTAGGATCATCCTTTGCTAAAGCTAGATC
CGCAAAAGATGCATGAAAAATGAG-GCCCAATTACGTTAGCGAAAATGAGGCCTGCACAGCCAACGGGC-TTCGTAGTCT
CGTAG-------AAAAAAACTCCGAGGCTCCGAGGTCTCCACGCCTCCACCGCCCCACTCACAACCTTATCGTCGCCGCG
GTACGAGCACAGATGGCGCCGCCGGCAGCAGCGCCGCCTGCCGCCATGTCCGCCCTCCCCACCTTCGCCTCCTCCCACCC
ATACCCTTCCCTCCCCACTCCCAAAACGGCCGCCCCCAAACCACGCCTCACCCTGGCCTACGCCGGCGCCGCCGCGGCTC
CCAATGCCGTCCCCCACCGCAGCGCCGCCGCCTCCAACGACCGCCTGCGAGGCCTGGTCCGCCGCGGCGACCTCGAGGAG
GCCCTCCGGCTCGTCGATTCCATGGCG------------TCCGCCGCCTTCGCCG---CGGGGCCCTGCGCCGCGCTCAT
CAAGAAGCTGTGCGCGTCCGGGCGCACCGCGGAGGCCCGGCGCGTGCTGGCGGCCTGCGAGCCCGACGTCATGGCCTACA
ACGCGATGGTCGCCGGGTACTGCGTCACGGGGCAGCTCGACAACGCGCGCCGGCTCGTCGCGGCGATGCCCATGGAGCCC
GACGCCTACACCTACAACACCCTCATCCGCGGCCTGTGCGGGCGCGGCAGGACCGATAACGCCCTCGCGGTGCTCGACGA
TATGCTCCGCCGGGGGTGCGTGCCCGACGTGGTCACCTACACCATCCTGCTCGAGGCCACCTGCAAGAGGAGCGGGTACA
AGCAGGCCATGAAGCTGCTCGACGAGATGCGCGACAAGGGGTGCGCCCCGGACATAATCACCTACAACGTCGTCGTCAAC
GGCATTTGCCAGGAGGGGCGAGTGGATGATGCCATGGAGTTCTTGAAGAGCCTGCCGTCCAACGGATGCGAGCCGAACAC
CGTCAGCTACAACATTGTGTTGAAGGGCTTGTGCACCGCGGAGCGGTGGGAGGACGCCGAGAAGCTCATGGCTGAGATGA
GTCGCAAGGGGTGCCCCCCGAATGTGGTGACATTCAACATGCTCATCAGCTTTTTGTGCCGGAGAGGATTGGTCGAGCCT
GCGATGGAGATTCTTGATCAGATCCCAAAGTACGGGTGCACGCCCAATTCATTGAGTTACAACCCGATACTTCACGCGTT
CTGCAAGCAAAAGAAGATGGACAGAGCCATGGCGTTTGTGGAACTGATGGTGTCCAGCGGCTGTTACCCCGACATTGTCT
CATACAACACTCTTCTTACTGCGCTGTGTCGTGGTGGGGAGGTTGGTGCCGCCGTTGAGCTGCTTCATCAACTCAAGGAC
AAAGGGTGCACCCCTGTCTTGATTAGCTACAACACCGTCATCGATGGCCTTACCAAAGCCGGCAAGACAGAGGAAGCTTT
AGAGCTGCTGAATGAGATGGTAACCAAAGGGCTCCAGCCGGACATAATCACTTACTCGACAATATCTTCTGGTCTTTGTC
GGGAAGACAGAATCGAAGAGGCGATCAAAGCATTTTGTAAAGTGCAGGACATGGGCATAAGGCCCAACACTGTGCTGTAC
AACGCGATACTTCTTGGGCTTTGCAAAAGGCGCGAGACACACAGTGCTATCGATCTGTTTACTTACATGGTGTCAAATGG
CTGCATGCCAAATGAATCAACCTACACTATATTGATTGAAGGCTTGGCTTACGAAGGCTTGGTCAAGGAGGCACGGGAAA
TGCTGGCTGAGTTGTGCTCCAGAGGGGTGGTGAGTAAGACTTTGGTAAATAAGGGAGCCATTCGGTTACTTGATGCTTGA
TGGAACTATGCATACTTAAAAAGGTTGACCAGACCAGTAGGAGTGTGTGGATCCAGGAATATGTTCTTGTGCATCTTAGG
CAGC----AGAGATACTTCATTGTTCTTAATGATGTCTTATTCGACGCTGTGTTCTTATGAACATGTGAGTGTCCTTTCT
TAATGTGAAGCGCACAGCCTCCTCCAGCTCAACTTGCTACAAACTTGTACAGGATTCTTCTCTCTTCTTTAATATACTCA
ATAGGGAGCTATCCTATCTTGTTTCCGTAGAACTGTTCTTACTGGAAAGTAGTTTTGTTTTCTTAGATTACACGGACTAA
AGAAAGA----------------------------------TATGCTGCTTTCTCAGCTGAGTTCTCAATAAAAACTGAG
ACAAATCCAATGTTTATGCTATTTTCCCAGATAATCTTAAGACACCTAAATTTTCTAAAGTTTGCCCATCTGCTGCAACT
ATCCACTAAGCTTTTTGGTTATGCAAAGTTTATACTTCTATCATTCATCATTGTATCATTTATGAATATAACACCTGCAT
TTACTACTCTGGTCGTAGTGGTGATGTTCAGTTATATATTCTATTCCAAGTTTCCAGCAAAACATTAGAAACTTCAGTTG
GCATTGCACTGTTCATACTGTTGGATCCATGCAGTTTGTGCTTTCCCAGTTTGCATAAAAAGGTGATTTCATAGTTGACG
AAGCATTGGCCGTTGGTCAGAGTA--AGAGTAGATATTACTTGTGTACTCACTCTGTCCAGAATTACTTGACGCTTAAAC
AGATGTATTTAGACTTGTGAA-------------------------------------------GAAGTTTTCAATAGTA
CTTCTGGACTTACATTTCTACTGAATATTTGAGTCCGAGTT-CTGTAAACTTGCGAGTTCCGACAGAATTTCAACGAAGC
ATGACTTTGCCCACACTGTAGGCACAACTATGATTGGTCCCATAGAAAGAAATGCAGGGGAACATTTTTATTTTTTCCGA
AAGATCCTACTAAGTGCTGGCCTTTTCTTA---TAGATATTTAGCAG
>chr1A_419
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------------------TCACATCCGGCGAAGTCACCGGCCACCGCAGATGAGCGCCGTCGGTCAGCGAGGAAAGAGAA
ACTGGACTGTCGTTGAAGAACTTGTCGTTCTGGGGCGCCGGGCCACCTTTACACATGGGCCTCATCTACGCGCAGCCCAA
CCGACATTTCTTACCAGCATTGTTCAGTCTCGTTTGTAGCCCTTTTTCGAAGCAAGTCAACTGACTTCACTCCATACTGC
TCAAAAAACAAAATTCACTCCATACGAAGATACCGTTCATTCAAGTTTTCATTGGGCGCATTTAGCATGCCTCAAATTCA
TTTTCCCTTTTAATTACTCTTTTTTT---GTATAACTTTCGCACGGGGAACTTTTATAGGAGAAGTTTGAATTCGTTCTG
TTCGGATCAA------TCTTGGTTCAAAATGGTTTAAT------------------------------------------
---AATTGCCTACATAATTTGGGCAGCCTTTGATATTTATTTTAAGCAAAGGGCTGCCTTTTCTTTTTGGGTATATCCTT
TGCTGCTTTTTTGTT-----------------------------------------------------------------
-------------TGAGAAATGGAAGCCCAATTACGTTAGCGAAAATGAGGCCTGCACAGCCGACGGGCTTTCGTAGTCT
CGTAG-------AAAAAAACTCCGAGGCTCCAAGGTCTCCACGCCTCCACCGCCCCACTCACAACCTTATCGTCGCCGCG
GCACGAGCAAAGATGGCGCCGCCGGCAGCAGCGCCGCCTCCCGCCATGTCCGCCCTCCCCACCTTGGCCTCCTCGCACCC
ATACCCTTCCCTCCCCACGCCCAAAACCGCCGCCCCCAAACCACGCCTCACCCTGGCCTATGCCGGCGCCGCCGCGGCTC
CCAATGCCGTCCCCCACCGCAGCGCCGCCGCCTCCAACGACCGCCTGCGAGGGCTGGTCCGCCGCGGCGACCTCGAGGGG
GCCCTCCGGCTCGTCGAGTCCATGGCGGGCCTCGACCCTTCCGCGGCCGCCGCCGCACCGGGGCCCTGCGCCGCGCTCAT
CAAGAAGCTGTGCGCGTCCGGGCGCACCGCGGAGGCCCGGCGCGTGCTGGCCGCCTGCGAGCCCGACGTCATGGCCTACA
ACGCCATGGTCGCCGGGTACTGCGTCACGGGGCAGCTCGACAACGCGCGCCGGCTCGTCGCGGCGATGCCCATGGAGCCC
GACGCCTACACCTACAACACCCTCATCCGCGGCCTGTGCGGGCGCGGCAGGACCGACAATGCCCTCGCGGTGCTCGACGA
TATGCTCCGCCGTGGGTGCGTCCCCGACGTGGTCACCTACACCATCCTGCTCGAGGCCACCTGCAAGAGGAGCGGGTACA
AGCAGGCCATGAAGCTGCTCGACGAGATGCGCGACAAGGGGTGCGCCCCGGACATAATCACCTACAACGTCATCGTCAAC
GGCATTTGCCAGGAAGGGCGGGTCGATGACGCCATGGAGTTCTTGAAGAGCCTGCCGTCCAACGGATGCGAGCCGAACAC
CGTCAGCTACAACATTGTGTTGAAGGGCTTGTGTACCGCGGAGCGGTGGGAGGACGCCGAGAAGCTCATGGCTGAGATGA
GTCGCAAGGGGTGCCCCCCAAATGTGGTGACATTCAACATGCTCATCAGCTTTTTGTGCCGGAGAGGATTGGTTGAGCCT
GCGATGGAGATTCTTGATCAGATCCCAAAGTACGGGTGCACGCCCAATTCGTTGAGCTACAACCCGATACTTCACGCGTT
CTGCAAGCAAAAGAAGATGGATAGAGCCATGGCGTTTGTGGAACTGATGGTGTCCAGCGGCTGTTACCCCGACATCGTCT
CATACAACACTCTTCTTACCGCGCTGTGTCGCGGTGGGGAGGTTGATGCCGCTGTTGAGTTGCTTCATCAACTCAAGGAC
AAAGGCTGCACCCCTGTCTTGATTAGCTACAACACCGTCATCGATGGCCTTACCAAAGCCGGCAAGACAGAGGAAGCTTT
AGAGCTGCTGAATGAAATGGTAACCAAAGGGCTCCAGCCGGATATAATCACTTACTCGACAATATCTTCTGGCCTTTGTC
GGGAAGACAGAATCGAAGAAGCGATCAAAGCATTTTGTAAAGTGCAAGACATGGGCATAAGGCCCAACACTGTGCTGTAC
AACGCGATACTTCTTGGGCTTTGCAAAAGGCGTGAAACACATAGTGCTATCGATCTGTTTACCTACATGGTATCAAATGG
CTGCATGCCAAACGAATCGACTTACACTATATTGATTGAAGGCTTGGCTTATGAAGGCCTGGTCAAGGAGGCACGGGAAA
TGCTGGCTGAGTTGTGCTCCAGAGGGGTGGTGAGTAAGACTTTGGTAAATAAGGGAGCCATTCGGTTACTTGATGCTTGA
TGGAACTATGCATACTTAAAAAGGTTGACCAGACCAGTAGGAGTGTGTGGATCCAGGAGTATGTTCTTGTGCATCTTCGG
CAGTACGTAGAGATACTAAATTGTTCTTAATGATGTCTTATTCGACGCTGTGTTCTTCTGAACATGTGAGTGTCCTTTCT
TAATGTGAAGCGCACAGCCTCCTCCAGTTCAACTTGCTAGAAACTTGTACAG----------------------------
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>chr1B_635
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-------------------------------------------------------------------------------C
TAAAAAAACAGACTTCACTCCATATGAAGATACCGTGCATTCAAGTTTTCATTGGGCACATTTAGCATGCCTCGAATTCA
TTTTTTCTTTGAATTACTCTTTTTTTTGTGTATAGATTTCGCACGGGAAACTTTTATAGGAGAAGTTTGAATTCGTTCTA
TTCAGATATTGAGCGGTCTTGGTTTGAAATGGTTTAATTTTTTAGGCTTTTTTAGCAAAAAAAAAGGCTATTTGAAATGG
TTTAATTGCCTGCATAATTTGGGCAGCCTTTGCTCTCTTTTTTTTGAGC-------------------------------
----------------------------------------------------------------TTGCTAAAGTTATGTC
CACAAAAGATGCATGAAAAATGGAAGCCCAGATACGTTAGAGAAAATGAGGCCTGCACAGCCAACGGGC-TTCGTAGTCT
CGTAGGTGTAGAAAAAAAACTCCGAGGCTCGGAGGTCTCCACGCCTCCACCGCCCCACTCACAACCTTATCGTCGCCGCG
GCCTGAGCACAGATGGCGCCGCCGGCAGCAGCGCCGCCTCCCGCCATGTCCGCCCTCCCCACCTTCGCCTCCTCCCACCC
ATACCCTTCCCTCACCACGCCCAAAACCGCCGCCCTCAAACCGCGCCTCAACCTGGCCTATGCCGGCGCCGCCGCGGCCC
CCAATGCCGTCCCCCACCGCAGCGCCGCCGCCTCCAACGACCGCCTGCGGGGTCTGGTCCGCCGCGGCGACCTCGAGGAG
GCCCTCCGGCTCGTCGAGTCCATGGCGGGCATCGAGCCGTCCGCGGC---CGCCG---CGGGGCCCTGCGCCGCGCTCAT
CAAGAAGCTGTGCGCGTCCGGGCGCACCGCGGAGGCCCGGCGCGTGCTGGCCGCCTGCGAGCCCGACGTCATGGCCTACA
ACGCGATGGTCGCCGGGTACTGCGTCACGGGGCAGCTCGACAACGCCCGCCGGCTCGTCGCGGCGATGCCCATGGAGCCC
GACGCCTACACCTACAACACCCTCATCCGCGGCCTGTGCGGGCGCGGCAGGACCGACAACGCCCTGGCGGTGCTCGACGA
TATGCTCCGCCGGGGGTGCGTGCCCGACGTGGTCACCTACACCATCCTGCTCGAGGCCACCTGCAAGAGGAGCGGGTACA
AGCAGGCCATGAAGCTGCTCGACGAGATGCGCGACAAGGGGTGCGCCCCGGACATCATCACCTACAACGTCGTGGTCAAC
GGCATTTGCCAAGAGGGGCGAGTCGATGATGCCATGGAGTTCTTGAAGAGCCTGCTGTCCTATGGATGCGAGCCAAACAC
GGTCAGCTACAACATTGTGCTGAAGGGCCTGTGCACCGCAGAGCGGTGGGAGGACGCCGAGAAGCTCATGGCTGAGATGA
GTCGCAAGGGGTGCCCCCCAAATGTGGTGACATTCAATATGCTCATCAGCTTCTTGTGCCGGAGAGGATTGGTCGAGCCT
GCGATGGAGATTCTTGAGCAGATCCCAAAGTACGGGTGCACGCCCAATTCGTTGAGTTACAACCCAATACTTCACGCATT
CTGCAAGCAAAAGAAGATGGACAGAGCCATGGCGTTTGTGGAACTGATGGTGTCCAGTGGCTGTTACCCCGACATCGTCT
CATACAACACTCTTCTTACCGCGCTGTGTCGCGGCGGGGAAGTTGATGCCGCTGTTGAGCTGCTTCATCAACTGAAGGAC
AAAGGCTGCACCCCTGTCTTGATTAGCTACAACACCGTCATCGATGGCCTTACCAAAGCCGGCAAGACAGAGGAAGCTTT
AGAACTGCTGAATGAGATGGTTACCAAAGGGCTCCAACCGGACATAATCACTTACTCGACAATATCTTCTGGTCTTTGTC
GGGAAGACAGAATCGAAGAAGCGATCAAAGCATTTTGTAAAGTGCAAGACATGGGCATAAGGCCCAACACTGTGCTGTAC
AACGCGATACTTCTTGGGCTCTGCAAAAGGCGTGAAACACACAGTGCTATCGATCTGTTTACTTACATGATATCGAATGG
CTGCATGCCAAATGAATCGACCTACACTATATTGATTGAAGGCTTGGCTTACGAAGGCTTGGTCAAGGAGGCACGGGAAA
TGCTGGCTGAGTTGTGCTCCAGAGGAGTGGTGAGTAAGACTTTGGTAAATAAGGGAGCCATCCGGTTACTTGATGCTTGA
AGGAACTATGCATACTTAAAAAGGTTGAGCAGACCAGTAGGAGTGTGTGGATCCAGGAATATGTTCTTCTGCATCTTCGG
CAGTACGTAGAGATACTTCATTGTTCTTAATGATGTCTTATTCGATGCTGCCTTCTTATGAACATGTGAGTCTCCTTTCT
TAATGTGAAGCGCACAGCCTCCTCCAGTTCAACTTGCTACAAACTTGTACAGGATTCTTCTCTATTCTTTAATATACTCA
ATAGGGAACTATCCTATCTCGTCTCCGTAGAACTGTTCTGACTGGAAAATAGTTTTGTTTTCTTAGATTACACAGACTAA
AGAAAGGATTGCATTGACACTCTATTCTGATTCAAACTACTTATGCTGCTTTCTGAGCTGAGTTCGCAATAGAAACTGAG
ACAAATCCAATGTTTATGCTATTTAGCCAGATAATCATAGATACA-TAAATTTTCTGAAGTTTGCCTATCTGCTGTAACT
ATCCACTGAGTTCTTTGGTTATGCCAAGTTTATATTTTTATCATTCATCACTGTATCATGTATGAATATAACACCTGCAT
TTACT---CTGGTTATAGCGGTGATGTTCAGTTATATATTCTATGCTATGTTTCCAGCAAAACATTAGAAACTTCAGTTG
GCATTGCGCTGTTCATAGTGTTGGATCCATGCAGTTTGTTCTTTCCCAGTTTGCATAAAAAGGTTATTTTGTAGGTGACG
AAGCATTGGCCATTGGTCAGAGTGACAGAGTAGATATTACTCCCTCTGTACGGAAATATAAGAGCATTTAGGTCACCACT
TTAGTGATCTAAATGCTCTTATAATTCTTTATGGAGGGAGTACTTATCTACTAAACTTGTGAAGGAAGTTTTCAATAGTA
CTTCTGCAGTTACATTTCTACTGAATGTTTGAGTCCGAGTTTCTGTAAACTTCCGAGTTCCGACAGAATTTCAACGAAGC
ATGACTTTGCCCAGACTGTAGACACAACTATGATTGATCCCATAGAAAGAAATGCAGGGGGGGCCTTTC-TTTTTTCTGA
AAGATCCTGTTAAGTGCTGGCCTTTTCTTATAGTAGATATTTAGCAG
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSS------SS-------S---S---------------------------S--------------
----------------------S-----------SS---S----S-------------------------S---------
----------------------------------S--S-----------------------S------------------
-------------------------------------------------SS-----------------------------
----------S----------S-----------S----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------S---------------S-------------------------
----SSS-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------S--SS--
-S--------------------SS--------------------------------------------------------
--------------------------------------------------------------------------------
-S-------------------------------------S----------------------------------------
------------------S--------S--------------------------------S-------------------
----------------------------------------------------S---------------------------
-----------------S--------------------------S---SS------------------------------
---------------------------------------------------S----------------------------
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--------------------------------------------------------S-----------------------
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-----------------------S--------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S------------------------------------------------------------
--------------------------------------------------S-----------------------------
---------------------------------------------------------------------------S----
-------------------S-----------S-------------S------S---------------------------
-----S--------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S--------------------------S---------------------------------
--------------------------------S--S-----------------------------------S--------
------------------S-------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------S--
---S----------------------------------------------------------------------------
---------------------------S-----------------------------------S----------------
-------S-----------S--S----------------S--------S------------------------S------
------S-----------------------------------------------S----------S-----S--------
------------------------SS----------S--SSSSSSS----------S---------S--------S----
-------S--S-S-----------S---------S--S------------S--------S--------------------
-----SSS-----SS---S-------------------------S-S-S-------------------------------
-------S---------S---------------------S------------------------S----SS---S-----
-----------S-----------S-----------------SSSSSSS-SSSSSSS-SS-SS-SS-S--SSSS-SSS-SS
SS-SSS--S--S-SSSSSSS------------------------------------------------------------
------S-S-----------------S-------------------------S---------------------------
-------------S-------S--------------S-----------------------SSSSS---SS-------S--
--------SS-------------------------------------
>forward_64
--------------------------------------------AAGTAGGAGGGCGCAGGATA----------------
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>reverse_1063
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----------------------AGGCCCAATTACGTTAGCGA--------------------------------------
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>forward_551
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---------------------------------------------------CACATGGGCCTCATCTACGT---------
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>reverse_2373
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----------------------------------------------------CGTTGAGCTGCTTCATCAAC--------
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>forward_2352
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------------TTCTTACTGCGCTGTGTCGT------------------------------------------------
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>reverse_3337
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--------------------------------------------------------AAAGTTTGCCCATCTGCTGC----
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