>input_sequence_43334
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-------------ATGGCGGCCGCGGGAGACGCCGGCGAGAAGAAGATGGTGACGCTCAAGAGCTCGGACGGGGAGGAGT
TCGAGGTGGAGGAGGCGGTCGCCATGGAGTCGCAGACCATCCGGCACATGATCGAGGACGACTGCGCCGACAATGGCATC
CCGCTCCCCAACGTCACCTCCAAGATCCTCTCCAAGGTCATCGAGTACTGCAACAAGCACGTCCAGGCCAAGCCCGCCGA
CGCCGCC---------GCCG------CC---------G------CGCCC---------GACGCGGCGGCGC------CCC
CCGCCGAGGACCTCAAGAACTGGGACGCCGAGTTCGTCAAGGTCGACCAGGCCACCCTCTTCGACCTCATCCTGGTACGG
----A----ATCCCTCGA--------------------TCCCCCCC--TCCTTGCTCTAGATCTACTGTTTGTTTTCGTG
ATGCTGTTCCCCTTCTGGGGCTGGGGCTCGGATCGAGATTGGT-CTGCCCGTCTTGCTGCTGTTTAGATTAGGTTGGACG
GGC-----GTGCTGTCATCGAGCCAGATTAGATTCGAGCGGA--------------------------------------
--------------TTAGGTTAGGGTT-----ACATGATTGGTCTGTGCT------------------------------
---------------GTGCGGTCGTCCTACTCTGCAATCTGGAGATTGGTTAGATTAATATCATGAAAAAGAGAAATTAC
ATTCGATGTACACAGGGACCGTTCTTGTG--------------------------------------------GTAACCT
GTGATTGAATGATTGGTCTCTGCGGTCGTCCTCGATCATCAGACCACACAGAACTTGTTAG----------ATTGTGCCA
GTTAATTGCAACTTTATGTGAGTGGTAGAATGTCGAGTTTCTCTGTGATTCACTTGTGGAAACATCAG-AACACACAGAA
GAGT-AATATATGGTCTTTATCATTATGCACTGCTGTTTACCTAGCAATTGGTTTACTGTTAATCGTGCTTTTTACATAG
----TGATGCAAAGTCACACAATTAAACTATTGTTTCAAACTTTGTATCCA---------TGTGTTTATTATCTTGTCTA
ATCTTCTGAATGCAACTTTGCATACCTTCTTCCATCTATCACGGTTGCCTGATTCTGATTGTGGTGGTGTACTAGCAACA
TTACATACATTACATAGTGGTAGCTAAATTACCACATATTATGCCTGTTCTTGTGCCAAGTGATAGTTGCCAACTGTAAA
AGTCTGAGCTTTTCCGCAGGTGTTCAGTAGTATTGCTTTGAACTTGTTTTGTTACAGT---TATG-------TTGTTTCA
TTCTAGATAGGGTGGTCTCTCAGATGTTGCATCTACATAAT-----CCAATACCATACATTGCTTACCCGTGATCCCATG
TTCTGTC-------ACTGTTCCAGAC--ATAATCATAGCTGATACATACGGTTGC---TGCGTTCTGAGAAGTCGTGCTT
GTCATCTGAACCCATGCATGAATTTCCATAACTTATCCATATGTTCAGTTATCATCTTTTTTGCAAGAATGTAGTAGTAT
CAGCTCTGACTCTGTTTTATCACAGTTG--TGTTATTTTCTTTTGACGGTTGATCTTGATCCAGTTAGT---------CT
TATGACACCTGAACCCATGTTCTGGGCTTTGAATCGATATC-AATTGATCAATGCATGCCTTGTTTTGTGT---TTCTT-
-TTGCCACAAAAACATTCATGTAGAATGTCGAATTAG------------------TAAATGAATGCTTCTCTGACACGCT
GCTATTCCTTTTGCCCC-TTTGCCCC--CTCTCAGGCCGCAAACTTCCTCAACATCAAGGGGCTGCTGGACCTGACCTGC
CAGACTGTTGCGGACATGATCAAGGGCAAGACCCCGGAGGAGATCCGCAAGACCTTCAACATCAAGAACGACTTCACGCC
CGAGGAGGAGGAGGAGATCCGCAGGGAGAACCAGTGGGCCTTTGAGTAG-------------------------------
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-------------------------------
>chr7D_1_TraesCS7D01G016900
TGAAATGTGTTACTATGAAATGAGTGAAATGAATTTTGTAAAATGAGTGAAATCAATTTTTTGAAATGCGCTAAATCTTA
TTTGAAATGAGTGAAATATGTTCCTACCAGTGTTCGGCCAGGCAACTTCTGATACGTCTTCAATGTATCTATAACTTTTT
ATTGTTAAATGCTATGATGAGGGCGAGAGAGATGTATGTCCCCGTTGCAACACACGACCCTTTTG-CTAGTGTTATCATA
AATACAACCTTCTTCATCACATAGCCTTAAATTTTAGTGCATATGACAAACTTTACTGCTCAAGCATAAGCCAAATTAAG
AAACCACAAATACAATGATTTTCCAAGATTTAACTTTGATCAACGGTTAATCCATCTATACGGTCCAAATTTGGCTTAGT
AATTATTTGTCTCCGCTTCCTTTGGAGGCACGATACTCCATCTGTCCACGTGTTGCCCAAACCGCCCTTAATAACTTCCC
CCAAGCCGTCCAAAGAAGCCCAACCC-------ATCCAGCATCAAAGCACCCTTCTTTCCTCTCTTTCGATGCCGCAGTG
TTTCCTCTTCCTCATATCGCTAGGG-TTTCCTGTCGCTGCCGAGGAGGGGA--GGAGGGGAGATGGTGGTGATGGGGG-C
GGTGGGACTGCTCAGACTGAGGAGGACATGGAAGATGCGTCGACGAACTATGATGACAGTTACATACTTGCAGAGATCGG
CGTAGAAGGAGACGAGGAAGGACGCGGAGGAGATGACCCGAAAAAGGGGG-------GTTCGTGGTGATTGTGGACGTTA
TGATAGGCAAGATATCCGTCCACGTGGTGC--CCCCATCACCAAAATCACCT-AAAAATAAATAAATAAATACCCCACCC
GGACCCCATAAGCAAGC--------CCAACCCACACCGCAAGAAACAAAGCTCCAATCTTTC-CCCCTTCCGCCGCTGTC
GCCGCGTCTCCTCCCCGATCCCCAATCCCCGATCCGTCCGTCCGCC--C-CCACCCCCAGCCCGGATCCAG---------
----------GCGATGGCGGCCGCGGGAGACGCCGGCGAGAAGAAGATGGTGACGCTCAAGAGCTCGGACGGGGAGGAGT
TCGAGGTGGAGGAGGCGGTCGCCATGGAGTCGCAGACCATCCGGCACATGATCGAGGACGACTGCGCCGACAATGGCATC
CCGCTCCCCAACGTCACCTCCAAGATCCTCTCCAAGGTCATCGAGTACTGCAACAAGCACGTCCAGGCCAAGCCCGCCGA
CGCCGCC---------GCCG------CC---------G------CGCCC---------GACGCGGCGGCGC------CCC
CCGCCGAGGACCTCAAGAACTGGGACGCCGAGTTCGTCAAGGTCGACCAGGCCACCCTCTTCGACCTCATCCTGGTACGG
----A----ATCCCTCGA--------------------TCCCCCCC--TCCTTGCTCTAGATCTACTGTTTGTTTTCGTG
ATGCTGTTCCCCTTCTGGGGCTGGGGCTCGGATCGAGATTGGT-CTGCCCGTCTTGCTGCTGTTTAGATTAGGTTGGACG
GGC-----GTGCTGTCATCGAGCCAGATTAGATTCGAGCGGA--------------------------------------
--------------TTAGGTTAGGGTT-----ACATGATTGGTCTGTGCT------------------------------
---------------GTGCGGTCGTCCTACTCTGCAATCTGGAGATTGGTTAGATTAATATCATGAAAAAGAGAAATTAC
ATTCGATGTACACAGGGACCGTTCTTGTG--------------------------------------------GTAACCT
GTGATTGAATGATTGGTCTCTGCGGTCGTCCTCGATCATCAGACCACACAGAACTTGTTAG----------ATTGTGCCA
GTTAATTGCAACTTTATGTGAGTGGTAGAATGTCGAGTTTCTCTGTGATTCACTTGTGGAAACATCAG-AACACACAGAA
GAGT-AATATATGGTCTTTATCATTATGCACTGCTGTTTACCTAGCAATTGGTTTACTGTTAATCGTGCTTTTTACATAG
----TGATGCAAAGTCACACAATTAAACTATTGTTTCAAACTTTGTATCCA---------TGTGTTTATTATCTTGTCTA
ATCTTCTGAATGCAACTTTGCATACCTTCTTCCATCTATCACGGTTGCCTGATTCTGATTGTGGTGGTGTACTAGCAACA
TTACATACATTACATAGTGGTAGCTAAATTACCACATATTATGCCTGTTCTTGTGCCAAGTGATAGTTGCCAACTGTAAA
AGTCTGAGCTTTTCCGCAGGTGTTCAGTAGTATTGCTTTGAACTTGTTTTGTTACAGT---TATG-------TTGTTTCA
TTCTAGATAGGGTGGTCTCTCAGATGTTGCATCTACATAAT-----CCAATACCATACATTGCTTACCCGTGATCCCATG
TTCTGTC-------ACTGTTCCAGAC--ATAATCATAGCTGATACATACGGTTGC---TGCGTTCTGAGAAGTCGTGCTT
GTCATCTGAACCCATGCATGAATTTCCATAACTTATCCATATGTTCAGTTATCATCTTTTTTGCAAGAATGTAGTAGTAT
CAGCTCTGACTCTGTTTTATCACAGTTG--TGTTATTTTCTTTTGACGGTTGATCTTGATCCAGTTAGT---------CT
TATGACACCTGAACCCATGTTCTGGGCTTTGAATCGATATC-AATTGATCAATGCATGCCTTGTTTTGTGT---TTCTT-
-TTGCCACAAAAACATTCATGTAGAATGTCGAATTAG------------------TAAATGAATGCTTCTCTGACACGCT
GCTATTCCTTTTGCCCC-TTTGCCCC--CTCTCAGGCCGCAAACTTCCTCAACATCAAGGGGCTGCTGGACCTGACCTGC
CAGACTGTTGCGGACATGATCAAGGGCAAGACCCCGGAGGAGATCCGCAAGACCTTCAACATCAAGAACGACTTCACGCC
CGAGGAGGAGGAGGAGATCCGCAGGGAGAACCAGTGGGCCTTTGAGTAGAGGCGTTTGAATAGAGGAGCATGTA------
------------GGATGAACAATGCTTAGTATTCGTCATGTTTGCGTTTTAGCGCCTTTTTTTATGTCGCCATAATGGTT
TCATCGAACAGCCTGAGGTATTGCTCGTGTGAAACCCTGACCGTGTCGTCTGTTC----GTTGTTTGCTGTGGCGTGAGC
GTGTAGAATTGTGGTGGCACCGCTGCTCGCACAAGTAGGCGTGTCGCCGGTGCTGAGGGTGCTACTCTGGCGCCGCATCG
GCGGCAGTCGATGGAGAGGCTCCTGCCGGCGTGGTAGGTGTCGCCTGTGGCGGTCACGGACAAAGGCGCTCCACCCTTTG
GTCATGATGTAGCTCTGGCTGCTGCACCAGTAGGAGAAGCGGAACTTCCCAACGCTTTGCCGCCGCCACGGCTGTCCTGA
AACCAAAGCACGTCGCCGGCCACCCTCCCGGGGCCGTCGCGGAGCATCTGTGGGAGGAAGTGTCGCTCGGCTAAGTGCTT
GAGCATCTGTTGATCGATCCTTCTGCATCATCTTGCTCTGCTCCGCTGCTCCCGAATGTGGCTGTCAACGCCATTGGTTC
GCTGCAACGCAACAGATCTCTAGCTAGCTTAGATTCTAGTATATCGGTACAGTTTCTAAGCTCCCAGGAATTGGTGCCCT
GGGAGCGCTCGAGTATAATCCCAATCGTGCAATGAATTTATGGTGCCTAAGTGTGTATATATAGCGGCGTGTCGGCGGCT
CGTTTTGGCAGCGGCAATGGTCGTTCGGTTGTCCATGGATCTCGATGTAATTTTTATTATGTTTGGGATGCTTGGTACTT
CGATGAATCTTTATAATAAATTTGATATTTTAGAAAAAAAACCCCGCTAATTTCATCCTGTTCCCTGAAAGGGCAGTGAT
AGGCGCCGGCGGGCCGGTCGCAGCGCATCCGTCCGATTCATTCATTTACAGCTGTCAGATCTGACGCCCCCCTACAGTCG
TCTTCTTCCTTTGTTCTCCACGCTCCTGCAC
>chr7A_176
GATGGA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------GCGAGAAAGATGTATGTCCATGTAAGAACGCACGAGACCTTTTACTAGTGTTATCATA
AATACAACCTTCTTCATCACATAAACTTAAATTTCGGTGCCTATGACAAACTCTAGTGCTCAAGCAGAAGCCAAATTATG
AAACCACAAATACAATGATTTTCCAAGATTTAACTTTGATCAACGGTTAATCCATCTATACGGCCTAAATTTAGCTTATG
AATTATTTGCCCTCGCTTCCTTTTGACGTACGATACTCTA-----CCACGTGTTGCCCAAACCACCCCTAATAAATTCCC
CCAACCCGACCAAAGAAGCCCAACCCATTCAAGATCCAGCATCAAAGCACCCATCTTTCCTCTCTTTCCTTGCCGCCATC
TTTCCTCTTCCTCATATTGCTAGGGATTTCCCGCCGCCGGCGAGGAGGAGGAGGGAGAGGTTGTGGTGATGATGGTGGGC
GGTGGGACTGCTCGGACAGAGGAGGGCATGGGAGATGCGTCGAGGATCTATGATGACAGTGACGTACTTGCGGAGGTCGG
CGTA------------GAAGGGCACGGAGGAGATGAACAGGGACAGGGTGTGTGTGTGTTCCTGGTGATTGTGGACGTTA
CGATAGGCAAGATATCCGTCCACGTGGTGC--CCCCATCACCAAAATCACCT-A--------TAAATAAATACCCCGCCC
GGACCCCATAAGCAGGC--------CCAACCCACACCGCAAGAAACAAAGCTCCCATCTTTT-CCTCTTCCTCCGCCGTC
GCCGCGTCTCCTCCCCGATCCCCAATCCCCGATCCGTCCGCCCCC-------ACCCCCAGCCCAGATCCAG---------
----------GCGATGGCGGCCGCGGGAGACGCCGGCGAGAAGAAGATGGTGACGCTCAAGAGCTCGGACGGGGAGGAGT
TCGAGGTGGAGGAGGCGGTCGCCATGGAGTCGCAGACCATCCGCCACATGATCGAGGACGACTGCGCCGACAACGGCATC
CCGCTCCCCAACGTCACCTCCAAGATCCTCTCCAAGGTCATCGAGTACTGCAACAAGCACGTCCAGGCCAAGCCCGCCGA
CGCCGCCGACGCCGGGGCCG------CC---------G------CGCCC---------GACGCGGCGGCGC------CCC
CCGCCGAGGACCTCAAGAACTGGGACGCCGAGTTCGTCAAGGTCGACCAGGCCACCCTCTTCGACCTCATCCTGGTATGG
----A----ATCCCTCGA--------------------CCCCCCTCCTTGTAAACTCTAGATCTGC----TG-TTTCGTG
ATGCTGTTCCCCTTTTGGGGCTGGGGCTCGGATCGAGATTGGT-CTGCCCGTG-------------GATTAGATTGGACG
GGCTACACGCGCCGTCGTCGAGCCAGATTAGATTCGAGCGGA--------------------------------------
--------------TTAGGTTAGGTTT-----ACATGATTGGTCTGTTGCTT----------------------------
-----------------------GTCCTACTCTGCAATCTGGAGATTGGATAGATTAATATCGTGAAAAACAGATATTTT
ATTCGATGTACACAGGGACCATTCCATGTTCTTGTGGACGTGG-------------------------------------
--GAATAATTGATTGCCATCCATTTC-------------------------AACTTGTTAGATGCACTATCATTGTGCCA
GTTAATTGTGCGAGTGGTAG------AGAATGTCAAGTTTCTCTCTGATTAACTTGTGGAAACATCAG-AACACACAGAA
CAATAAATA---------------TATGCGCTGTTGTTTATCTAGCAATTGGTTCACTGTTAATTGTGCTTTTTACATAG
----TGATGCAAAATTACACAATTAAACTATTGTTTCAAACTTTGTATCCA---------TGTCTTTACTATCTTGTCTA
AACTTCTGGATCCAAATTTGCATGC---CTTCTATCTATCACGGTTGCCTGATTA---------TGGTGTACTAGCAACA
TTACATACATTGCATAGTGGTAGCTAAATTTCCACATATTGTGCCTGTTCTTGTGCCAAGCGATAGTTGCCAACTGTAAA
ATTCTGAGCTTTTCTGCAGGTCTTCAGTAGTATTGCTTTGAACTTGTTTTCTTACTGT---TATGTTGTTTCTTGTTTCA
TTCTAGATAGGGTGGTATCTCAGATGTTGCATTTACATAAT-----CCAAGACCATACATTCCTTACCCCCGATCCCATG
TTCTGTCTTGCTTCACTGTTCCATATATATAGTGACAGCTGATACATACTGTTGCCAATGCGTTCAGAGAAGTGGTGCTT
GTCATCTGAACCCATGCATGAATTTCCAAAACTTATCCATATGTTCAGTTATCATCTTTTCTGCAAGAATGTAGTAGTAT
CAGCTCTGACTCTGTTTTATCACAGTTA--TGTTATTTTCTTTTGACTGTTGATCTTGATCCAGTTGCGTTAGTCACTC-
-ATGACACCTGAACCCATGTTCTGGGCTTTGAATAGATATCTAATTGATGAATCCATGCCTTGTTTTGTATGTGTTTTT-
-TTGCCGCAAAAACATTCATGTAGTATGTCTTAATTAGC--TATGTTTTTGTAAATGAATGCTTC--TCTCTGACATGAT
GCTGCTCTTTTTGCCCC-TTTGGCCC--CTCTCAGGCCGCAAACTTCCTTAACATCAAGGGGCTGCTGGACCTGACCTGC
CAGACTGTTGCAGACATGATCAAGGGCAAGACCCCGGAGGAGATCCGCAAGACCTTCAACATCAAGAACGACTTCACGCC
CGAGGAGGAGGAGGAGATCCGCAGGGAGAACCAGTGGGCCTTTGAGTAGAGGCGGTTGAGTAGAGGAGCATGTAGGTGAT
GCTGTCCGTGCTGGATGAACAATGCTTAGTATTCGTCATGTCTGCGTTTTAGCGCCCTTTGTTATGTCATGATAATGGTT
TCATCGAACAGCCCGAGGTATCGCTCGTGTGAAACCCTGACCCTGTCGTCTGT-C----GTTGTTTGCTGTGGCGTGAGT
GTGTAGACTTGTGG---CACCGCTGTCG----------------------------------------------------
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>chr4A_779
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-----------------------------------------------------------------------------TTA
CGTTAGGCAAGATATCCGTCCACGTGGTGGTGCCCCATCTCTAAAATCCCCTAAAAAATAAATAAATAGATACCCCACCC
--------------GGC--------CCAACCCACACCGCAAGAAACAAAGCTCCAATCTTTT-CCTCCTCCGCCGCCGTC
GCCGCGTCTCCTCCCCAATCCCCAATCCCCGATCCGTCCGCCCCCGATC-CCACCCCCAGCCCGGATCCAGC--------
---------AGCGATGGCGGCCGCGGGAGACGCCGGCGAGAAGAAGATGGTGACGCTCAAGAGCTCGGACGGGGAGGAGT
TCGAGGTGGAGGAGGCGGTGGCCATGGAGTCGCAGACCATCCGGCACATGATCGAGGACGACTGCGCCGACAACGGCATC
CCGCTCCCCAACGTCACCTCCAAGATCCTCTCCAAGGTCATCGAGTACTGCAACAAGCACGTCCAGGCCAAACCCGCCGA
CGCCGCC---------GCCG------CCGGGGCCGCCG------CGCCC---------GACGCCGCCGCGC------CCC
CCGCCGAGGACCTCAAGAACTGGGACGCCGAGTTCGTCAAGGTCGACCAGACCACCCTCTTCGACCTCATCCTGGTATGA
ACCAA----ATCCCTCGA--------------------TCCCCCT---TCCTTCCCCCAGATCTACTCTTTG-TTTCCTG
ATGCTGTTCCCCTTGAA-------------GATCGAGATTGGT-CTGCCCGTCTTGCTGCTGTCTAGATTAGGTTGGACG
GGCTGCTCGCGCCGTCATCGAGCCAGATTAGATTCGAGCGGA--------------------------------------
--------------TTAGGTTAGGGTTTGCATGATT--------------------------------------------
----------GGCCCGTGCGGTCGTCCTACTCTGCAATCTGGAGATTG-------------------------------T
ATTCGATGTACACAGGGACCGTTCCATGATCTTGTGGTCTGGTATGCTTCACTGTATACAATTGTTGTTGTTAGTAACCT
GTGAACAATCGATTGTCATCCATGCC-------------------------AACTTATTAGATGCACTATCATTGTGCCA
GTTAATTGCGCGAGTGGTAG------AGAATGT-AAGTTTCTCTGTGATCAACTTGTGGAAACATCAAAAACACACAGGA
CAAT-AATA---------------TACGCGCTGTTGTTTATCTAGCAATTGGTTTACTGTTAATTGTGCTTTTTACATAG
----TGATGCTGAATTACACAATTAAACTATTGTTTCGAACCTTGCATCCA---------TGTCTGTATTATCCTGTCTA
ATCTTCTCGATCCGACTTTGCATGCCTTCTTCTATCTATCACGGCTGCCTGATTG---------TGGTGTGCTAGCCACA
TTACATACATTACATAGTGGTAGCTAAATGAC--CACATTATGCCTGTTCTTGTGCTTGGTGATAG--------------
--------CTTTTCCGC-GGTGTTCAGTAGTATCGCTCTGGACTTGTTTTGTTGTTACTGCTATG-------TTGTTTCA
TTCTAGATAGGGTTGTATCTCAGATGTTGCATCTACATAATATAATCCAAAATCATACACTGCTCGCCGCTGATCCCATG
TTCTGTCTGGCTTCCCTTTTCCATAC--ATAGTGATAGCTGATGCGTACAGTTGCCAGTGCGTTCAGAGAAGTGGTGCTT
GTCATCTGAACCCATGCATGAATTTCGAAAATTTATCCAATCTA-CAGTTATCATCTTTTCTGCAAGAATGTAGTAGTAT
CAGCTCTGACTCTGCTTTATCACAGTTA--TGTTATTTTCTTTTGACTGTG-----------------------------
-----GATCTTGATCCATGTTCTGGGATTTGAATCGATATTT-ATTGATCAACGCATGCCTTGTTTTGTGTCTTTTTTCT
CTTGCTGCAAAAACGTTCATGTAGAATGTCTAATTAGCTATTATGTTTTTGTAAATAAATGAATGCTTCTCTGACACGCT
GCTATTCTTTTTGCCCCTTTTGCCCC--CTCTCAGGCCGCAAACTTCCTCAACATCAAGGGGCTGCTGGACCTGACCTGC
CAGACGGTTGCGGACATGATCAAGGGCAAGACCCCGGAGGAGATCCGCAAGACCTTCAACATCAAGAACGACTTCACGCC
CGAGGAGGAGGAGGAGATCCGCAGGGAGAACCAGTGGGCCTTTGAGTAGAGGCCTTTGAGTAGAGAT-CATGTAGGCGAT
GCCGTCCGCGCTGGATGAACAATGCTTAGTATTCGTCATGTCTGCGTCTTAGCGCCCTTTTTCATGTCATCATAATGGTT
TCATCGAACAGCC---------GCTCGTGTGAAGCCCTGACCCTTTGGTATGT-CTGTCGTTGTTTGCTGTGTCGTGAGT
GTGTAGACTTGTGG---CACCGCTGCTCGCAGAAGTAGGCGTGTCGCCGATGCCGAGGGTACTACTCTGGCGCCGCCGAT
GCGGCGGCAGATGAAGAGGCT-----------------------------------------------------------
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>chr6B_835
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--------------------------------------------------------AATCAATAAATAAATACCCACCCG
--------------GCCGGACCCAACCAACCCACCCCGCACGCACCAAAGCTCCCAGCTTTTTCCCCTTCCGT--CCGTC
GCCGCCGCTGCTCTAGGGTTTCCTCTTCCCGATCCCC---------------------------GATCCAGCAGCAGCAG
CAGCGAGCGAGCGATGGCGGCCGCGGGAGACGCCGGCGAGAAGAAGATGATCACGCTCAAGAGCTCGGACGGCGAGGAGT
TCGAGGTGGAGGAGGCGGTGGCCATGGAGTCGCAGACGATCCGCCACATGATCGAGGACGACTGCGCCGACAACGGCATC
CCGCTCCCCAACGTCAACTCCAAGATCCTCTCCAAGGTCATCGAGTACTGCAACAAGCACGTCCAGGCCAAGCCCGCCGA
CGGGGCC---------GCGG------CC---------G------CCGCCGGAGCCTCGGACGCCGCCGCCCCCACCGCCC
CCGCGGAGGACCTCAAGAACTGGGACGCCGAGTTCGTCAAGGTCGACCAGGCCACCCTCTTCGACCTCATCCTGGTATGA
ATCAATCAAATCCCTCCCTCGATTCGATTTATTATTTA-CCCCCTCCTTTTTTGTTCTAGATCTGGCC------------
--GCCGTTCCCCTT------CCGGGCCTCGGATCCAGATTGGT-TTGCGCTTATTGCTGCTGTTTAGGTTCGATTGGACG
GGCTCCTCGTGCCCTCATCGATGAGGATTCGATTCTATTGGG--------------------------------------
--------------TCTGA-----------------------------TTTTACTCAAAGGACAGAGAT-----------
---------TGTGGTCTGATTTGTAGGTCAGGGTTAATTTG---------------------------------------
-------------------TGATCCATGTTCTTGTCTGCTGATGTGCTCTACTGTATA------------TGAATAACCT
GGGGAGCATCTAATCTTAT------------------------------------------------TATTATTGTGCCA
GTAAATTGTA--TATGTGAGGATGTGTTTTT-C-----------------------------------------------
--------------------------------------TATCTTGC--------------------------------AT
----TGTAGGTAAATCACATTATTATGCTAAGATCGAA------------------------------------------
-----------------------------ATTACAATA------------------------------------------
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---------------------------------------TGATGCATACACTTGGCAATGCATTCTGACAAGTGTTGCAA
GAATGAATCTGCTCT-----------------------------------------------------------------
------TGACTCTGTTTTGTTACAGTTAAATGTTTCTT---ATCTGAATTTCTT----ACCCTGTTATGCTCTAGTTACT
TCTGAGACCTCAACCTATGTTCTTGGTTTTCAATCAATATCT-ATTGATTAATGCATTCCTTGTTTTGTGGTTTAG--T-
-TTGCCGCAAAGCATCTACATACTGCAATCTG-ATTAGC--TCTGTTCTTGTAAATGAATG-TTC--TCTCTGACACGCT
GTTATTATTGTTGCCCGTTT--GCCCCCCTCTCAGGCTGCCAACTACCTGAACATCAAGGGGCTGCTGGACCTAACCTGT
CAGACTGTTGCCGACATGATCAAGGGCAAGACCCCGGAGGAGATCCGCAAGACCTTCAACATCAAGAACGACTTTACGCC
CGAGGAGGAGGAGGAGATCCGCAGGGAGAACCAGTGGGCCTTTGAGTAGAGG----------------------------
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-------------------------------
>chr6D_948
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------------------TCCCCAATTCCAAATTCATCCGCCCCCC--CGCCACCCCAATCCCAGATCCAGC--------
---------AGTGATGGCGACCTCG---GACACAGGCGAGAAGAAGATGATCATGCTCAAGTTGTCCGACGGCAAGGAGT
TTGACGTGGAGGAGGTGGTCGCCATGGAGTCGCAGACCATCCGCCACATGATTGAGGATGACTGCGCTGACAAAGCCATC
CCGATCCCCAACATCAACTCCAAGATCCTCTCCAAGGTCATCGAGTACTGCGACAAACATGTCCCGGCCAAGCCAGGCAA
CGTCGCC---------ACTGGATCCCCC---------G------GAGCCGCTGCATCTAACACCGTGTCTCCTGCCGCCC
TAGCAGAGGACCTCAAGATCTGGGACGCAGAATTCATCAAGGTCAACCATGCCACCCTCTTCGACCTCATCCAGGTATTA
TA------------TCCTTTGATTCGACCATTGT----------------CTTTTTCTAGATCTACTTTTTC-TTGA---
----TGTTCCCCTT------CTGGCACTAGGATCTAGATTGGGCTTGCGCGTCTTGCTAATATTTGTATTAGATTGGACG
G-------------------------------------------------------------------------------
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>chr6D_997
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----------------------------------------------------------------------G---------
----------GCGATGGCGGCCGCGGGAGACGCCGGCGAGAAGAAGATGATCACACTCAAGAGCTCGGACGGCGAGGAGT
TCGAGGTGGAGGAGGCGGTGGCCATGGAGTCGCAGACGATCCGCCACATGATCGAGGACGACTGCGCCGACAACGGCATC
CCGCTCCCCAACGTCAACTCCAAGATCCTCTCCAAGGTCATCGAGTACTGCAACAAGCACGTCCAGGCCAAGCCCGCCGA
TGGGGCT---------GCCG------CC---------GGAGCCGGAGCCGGAGCCTCGGACGCCGCC---CCCGCCGCCC
CCGCCGAGGACCTCAAGAACTGGGACGCCGAGTTCGTCAAGGTCGACCAGGCCACCCTCTTCGACCTCATCCTGGTATGA
ATCAATCAAATCCCTCGA--------------------TTCGA-----------TTCTAGATCTGTACTGTTTCTGGCC-
------------------------GGCTCGGATCCAGATTGGT----------TTGCTGCCGTTTAGGTTCGATTGGACG
GT--------------------CAAGATTCGATTTGATTGGGCTAGGGTTTACATACATGATTGGCTTGTTTTTACCCAA
AGGACAGAGATTTGTTAGGTTAGGGTTTACATGATT--------------------------------------------
----------GTGGTCTGATGTG-----------TAATTTG---------------------------------------
-------------------CAATCCATGTTCTTGTGGTCTGATGTATGTATA--TATA------------TGAATGACCT
TACC-----------------------------------------------------------------TTATTAGGCCT
GGAAATTCTATCTATGTGTGGATGAATTGTTTC-----------------------------------------------
--------------------------------------TATCTAGC--------------------------------AT
TGTATGTAGCTAAATCACATTTTTATGCTAAGATTTGTTTTTCTATGCTAGGATTGTCTCTGGCATTATTATCTTGTCTA
ATCTTTTGGATTCCACTGTTGATTTGTGGATTGCATTA------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------TTATCCTTGTACCGAGCATTGCTTGACTCTTGCACTAGCCA
TTCATACAC----------------------------------------------------------------------T
CTGCTCTGACTCTGTTTTGTTACAGTTA--TGTTTTTTTTAATCTCAATTTCTT----ATCCAGTTATGTTATAGTTACT
GCTTACTCCTCAACATAAGTTCTGGGCTTTGAATCAGTATCT-ATTCATTAATGCATTCCTTGTTTCATGGTTTTAGTTT
CTATCTACTCTATT-------------ATCTT-ATTAGC--TCTGTTCTTGTAAATGAA--AATGCTTATCTTATTAGT-
-------TTGTTGCCCT-TTTGCCCC--TTCTCAGGCTGCCAACTACCTGAACATCAAGGGGCTGCTGGACCTGACCTGC
CAGACTGTTGCTGACATGATCAAGGGCAAGACCCCAGAGGAGATCCGCAAGACCTTCAACATCAAGAACGACTTTACGCC
CGAGGAGGAGGAGGAGATCCGCAGGGAGAACCAGTGGGCCTTTGAGTAGAGG----------------------------
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-------------------------------
>chr6A_998
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----------GCGATGGCGGCCGCGGGAGACGCCGGCGAGAAGAAGATGATCACGCTCAAGAGCTCGGACGGCGAGGAGT
TCGAGGTGGAGGAGGCGGTGGCCATGGAGTCGCAGACGATCCGCCACATGATCGAGGACGACTGCGCCGACAACGGCATC
CCGCTCCCCAACGTCAACTCCAAGATCCTCTCCAAGGTCATCGAGTACTGCAACAAGCACGTCCAGGCCAAGCCCGCCGA
CGGGGCC---------GCGG------CC---------G------CCGCCGGAGCCTCGGACGCCGCCGCCCCCGCCGCTC
CCGCGGAGGACCTCAAGAACTGGGACGCCGAGTTCGTCAAGGTCGACCAGGCCACCCTCTTCGACCTCATCCTGGTATGA
ATCAATCAAATCCCTCCCTCGATTCGATTTATTATTTGTCCCCTCC--TTTTTGTTCTAGATCTGGCC------------
--GCCGTTCCCCTT------CCGGGCCTCGCATCCAGATTGGT-TTGCGCGTATGGCTGCTGTTTAGGTTCGATTGGATG
GGCTCCTCGTGCCCTCATCGATGAGGATTCGATTCTATTGGG--------------------------------------
--------------TTAGGTTAGGGTTTACATACATGATTGGCTTATCTTTTACTCAAAAGGACAGATATTTGTTAAGAG
TTTACATGATGTGGTCTGATTTGTAGGTCAGGGTTAATTTG---------------------------------------
-------------------TGATCCATGTTCTTGTGTTCTGATGTGCTATACTGTATA------------TGAATAACCT
GGGGAGCATCTAATCTTAT------------------------------------------------TATTATTATGCCA
GTAAATTGTA--TATGTGAGGATGTGTTTTTTC-----------------------------------------------
--------------------------------------TATCTTGC--------------------------------AT
----TGTAGCTAAATCACACTATTATGCTAAGATCGAA------------------------------------------
-----------------------------ATTGCAATA------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------TGATGCATACACATGCCAATGCATTCTGACAAGTGGTGCAA
GAATGAATCTGCTCT-----------------------------------------------------------------
------TGACTCTGTTTTGTTACAGTTA--TGTTTCTT---ATCTGAATTTCTT----ACCCTGTTATGCTCTAGTTACT
TTTGC------------TGTTCTTGGTTTTGAATCAATATCT-ATTGATTAATGCATTCCTTGTTTTGTGGTTTAG--T-
-TTGCCGCAAAGCATCTACATACTGCAATTTG-ATTAGC--TCTGTTCTTGTAAATGAATGCTTC--TCTCTGACATGCT
GTTATTCTTGTTGCCCTTTT--GCCC--CCCTCAGGCTGCCAACTACCTGAACATCAAGGGGCTTTTGGACCTAACCTGT
CAGACTGTTGCCGACATGATCAAGGGCAAGACCCCGGAGGAGATCCGCAAGACCTTCAACATCAAGAACGACTTTACGCC
CGAGGAGGAGGAGGAGATCCGCAGGGAGAACCAGTGGGCCTTTGAGTAGAGG----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSS------S------------SS--SSS---S-----SS-S---S---------------
-----------------------SS---------SS----S-----------S--S----------S-----------S-
---------------------------------------------------------------S-S------S-----SS
---------S-SS----------S--S-S---------S-SSSSS------------------S---S------S-----
----S---S-------------------------------------------S---------------SS------SS-S
-----------------S-------------S-S---S-S--------S-S------S--SSS-----S------S----
-------------S---S-------S-----S-----------S--S-------------S--S-------S---S----
----SSSSSSSSSSSS-----S-S------------S-S-SS-S----S------------S------------------
S-------------------------------------------------------------------------------
--------------S----------------------------------------------S--------------S---
----------------------------------------S--S------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------S------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------S--
-------------------------------------------------------------------S------------
--------------S-----------------------------------------------------------------
------------S-------------------------------------------------------------------
-----------------------------------------------SS-------------------------------
-------------------------------------------------S------------S-------S---S---SS
------------------------SSSSS---------------------------------------------------
----S-S-S------S-S--SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------
----------S--S-S----SS--SS--------S---------------S-----------------------------
S-S------SSSSSSSSSSSSSSS-----S---S------S-----------------------S---------------
-------------S-------------------------------------------------S----------------
--------S--S-----------S--------S---------------------SSSSSSSSSS----------------
--------------------------------------------------------------------------------
-S-----------------------------------------------------S------------------------
----------------S---------------------------------S------------------S----------
-----------------------S-------S-S---------------S------------------------------
----------------------------S-------------------------------S-------------------
---------------------------S-------------------S-------------------SS-----------
----------------------------------------------------------------------------S---
------------------------------S-------------------------------------------------
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------S--------------------
-----------------------------------------S--------------S-----------SS----------
-------------S-------S--------------------S----------S-------------------------S
-------S------SSS--------------S-----------------S---S------S---------------SSSS
-----S-SS----S-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_118
--------------------------------------------------------------------------------
------------------TGTTCCTACCAGTGTTCGGC------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
>reverse_1929
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------ATGATTGGTCTCTGCGGTCG----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
>forward_1535
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------TCGTG
ATGCTGTTCCCCTTC-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
>reverse_3560
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------CGGAACTTCCCAACGCTTTG---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
