>input_sequence_43327
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-----ATGAAGTCCGC---AGTAAGATCACCATGGCTAGTGCTAGCCATCGTCCTCTCCCTCTGCCTCTCCCTCTCGTTC
GCGTCGTGGGATGCCGAGGACGTAGGCAGGGGTAGTAGGAGGTGGCAAGAAGGGGGCGACGA---AGGGCGGTCCGGCGG
AAGT---GGCCGGCCGTACCACTTCGGCCAGGAGAGCTACCGGGAGTGGGCCAAGTCGCGGCACGGCCACTTTAAGGTGC
TGGAGCGGTTCGACCACGAGCTGCTCCGGGGTTCCATCGGCGACTACCGCGTCGCGTACCTGGACGCGGCGCCGCGCGCG
TTCCTGCAGCCCAGTCACCACGACGCAGACGAGATCGCCTTCGTCAGGGAAGGCGAGGGCGTGCTCGTGTTGCTGAGGAA
CGGGAAGCGGGAGTCGTTCTGCATCAGGGAGGGCGACGTCATCGTGATCCCGGCCGGATCCATCGTGTACTCCGCCAACA
CGCACCGGTCCAAATGGCTCCGCGTCGTCATGTTCATCAACCCCGTCTCCACGCCGGGCCGCTTCCAGGTGAGCGTGAGC
CATGGCCGCGGCTTGCAGACTTCTCTGCCATCTCCGTTTGCATGCAATTGCAACCTTACTTTTGG----TGTTCTTGATC
TGTTGGTAGGAGTTCTTCCTTATTGGATCTGGAGACGAGCGCCCGCAGTCCTTCTTGAGCGTCTTCAGCGACGAGGTTAT
CCAGGCCGCATTAAACGTGCGTACGCGCTGACCATCGGCACTGATTA-------TTTGTTTG--------ATCATCACTC
AATTCA-GCTCGATCAAGTTTTTGTGGGATTCTGCTTATTTTTGTAACAGACTCG-------------GCGGGAGGATGT
GGACAGAGTGTTTGAGAGCAAAAGCAAGGGTGAGGGTGAGATATATGAGGCGTCGGAGGAGCAGATACGGGAGCTGAGCA
GGTCGTGCTCCAGGGGAGGACGCGGC---GGCGGCGGCTCGGGTTCCGAGAAGGAGGACATCCAGCCGCGCAGCCTCACC
GGCGAGAAGCCGCGCTACTCGAACAAGCACGGCAGGTTCCACCAGATCACCGGAGACCAGTGCCACCACCTCCGCAAGCT
CGACATGGATGTGACCCTCGTCAACATCACCCGGGTAAAGCATCGGCGCCGCGCATACAGATAGTTCTGTAGCATCATGC
AACGGATTTGT----------------TCGCCTAAACCAATGTGT--G--TTTCGTTGTGCGTGCATGCATGCAGGGCTC
GATGACGGCACTGAAGTACACCACCCGGTCGACCAGGATCTACGTCGTCGTGGAGGGGCGCGACGGCTACTTCGAGATGG
CGTGCCCGCACATCTCCAGCTCCGGCCGTTCTGAACGCCGTGAGCACGAGCAAGAGCGCGAGCGCGAGCACGGGCAGGGC
AGGAGGAGCGAGGAGCGCGAGCGTGAGCAGGGGCGGGGCAGGAGGAGCGAGGAGCGCGAGCAGGAGCAGGGAAGGCAGGA
GGAGGAGCAGGGCCACGGCCGGGAGCAGGAGAAATCGAGGGGCTACAGGCAGGTGAGGGCCCAGATCAAGGTGGGGTCGG
TGATCGTGCTCCCCGCGGGCCACCCGGCGACGTTCGTGGCCGGGAACGACGGGAACCTCGCCCTGCTGTCCTTCGGCGTG
GGCGCCAACAACGACGAGGAGGTGTTCGTGACCGGCGGGAACAGCGTCCTGAAGCAGCTGGACGAGGCGGCCAAGGCGCT
GTCGTTCCCCCAGCAGGCGAGGGAGCTGGCGGACAGGGTCATCCGCGCGCAGCCGGAGTCCGTGTTCGTCGCCGGCCCGC
AGCAGCAGCGCCGCGTCGCCGACATGTGA---------------------------------------------------
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>chr5A_1_TraesCS5A01G432100
TTTCTTTTTTATTATGCATTTTCCTTTTTTATTATATTTGGCTGAGGCTGTGACTATGAACAACATACACTTATATAAAG
GGACCGTCTATTTAACAGGTGCATGAAAAAAGCCATTCCATCAGTTACTTTACTTCCTGACCATCGGATCTAGATCCAAC
GGCCTCTATCATGCCACGAACCATTCATATTCTTCCCCCCTTCTTCCTCCTCCCTTGCAGCCTACCCCGCCCCATCCGCC
TGCCTCTGCCCCCCGTGGCTGACGGGCGCTACCGTGCGCTTGCCTCGTCGCCCCGCCCTTCCCGACCACCCCGGCCATCC
CTCTAAGCTCCACCCCAACCGGAGAAAATGTCCGGCGATCCCCTACATCCACCCACCATTAAGATAGATAATGGGGTCGT
GACTCCCCCTAGTGAGGCCATGACTTCCCCCTGAGATTAGATGGTGGGGGTATGACTTTTTCTGGTGAGGTCCATCTTCT
TCAACGAGCTCGGATGAACTAGAATGGGTGACTACACGA-----------------------------------------
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-----------------------------------ATAAAATTTTCAGGCACATGAGATATAGCAAAACCGTTAAGTAAA
ACAAGTTACAATAAACCCATGCATGCGGGTTGATCGCGGATTAAACCCCAAGCAT--------------AGTGACAAGAT
AGATAAATGCATCAGATGGATAAGACTCTTGCAGGCGTGTAGTAGCTTCACCTTGGAGCATAGCTCCCAGCAAAAGAAAA
ATTCATTCCGCCGATGCAAAAGATCGTCGCCGAGCTATCCCATCCCAGCTCGGCTTGTTCCTATCTCAATCAA-CGTTGT
CCGTTCTCTGCAGATGGAGGCCAGCTATCTCGCATTGCATGCATGGCG---------------CCGTGCATGCGGCGCTT
CTTCACCACGTACGCACCCCGGCCTACACCTGGCCGCGCGCATGGCCT------------CCTCGCCGCATCGCCGCCCC
CTATATATACCATCACTCCCCCTGAGCTACGATCATCAACTCATCCAGTCAGTTAGCTCGTCACG-------AACAACGA
TCACGATGAAGTCCGC---AGTAAGATCACCATGGCTAGTGCTAGCCATCGTCCTCTCCCTCTGCCTCTCCCTCTCGTTC
GCGTCGTGGGATGCCGAGGACGTAGGCAGGGGTAGTAGGAGGTGGCAAGAAGGGGGCGACGA---AGGGCGGTCCGGCGG
AAGT---GGCCGGCCGTACCACTTCGGCCAGGAGAGCTACCGGGAGTGGGCCAAGTCGCGGCACGGCCACTTTAAGGTGC
TGGAGCGGTTCGACCACGAGCTGCTCCGGGGTTCCATCGGCGACTACCGCGTCGCGTACCTGGACGCGGCGCCGCGCGCG
TTCCTGCAGCCCAGTCACCACGACGCAGACGAGATCGCCTTCGTCAGGGAAGGCGAGGGCGTGCTCGTGTTGCTGAGGAA
CGGGAAGCGGGAGTCGTTCTGCATCAGGGAGGGCGACGTCATCGTGATCCCGGCCGGATCCATCGTGTACTCCGCCAACA
CGCACCGGTCCAAATGGCTCCGCGTCGTCATGTTCATCAACCCCGTCTCCACGCCGGGCCGCTTCCAGGTGAGCGTGAGC
CATGGCCGCGGCTTGCAGACTTCTCTGCCATCTCCGTTTGCATGCAATTGCAACCTTACTTTTGG----TGTTCTTGATC
TGTTGGTAGGAGTTCTTCCTTATTGGATCTGGAGACGAGCGCCCGCAGTCCTTCTTGAGCGTCTTCAGCGACGAGGTTAT
CCAGGCCGCATTAAACGTGCGTACGCGCTGACCATCGGCACTGATTA-------TTTGTTTG--------ATCATCACTC
AATTCA-GCTCGATCAAGTTTTTGTGGGATTCTGCTTATTTTTGTAACAGACTCG-------------GCGGGAGGATGT
GGACAGAGTGTTTGAGAGCAAAAGCAAGGGTGAGGGTGAGATATATGAGGCGTCGGAGGAGCAGATACGGGAGCTGAGCA
GGTCGTGCTCCAGGGGAGGACGCGGC---GGCGGCGGCTCGGGTTCCGAGAAGGAGGACATCCAGCCGCGCAGCCTCACC
GGCGAGAAGCCGCGCTACTCGAACAAGCACGGCAGGTTCCACCAGATCACCGGAGACCAGTGCCACCACCTCCGCAAGCT
CGACATGGATGTGACCCTCGTCAACATCACCCGGGTAAAGCATCGGCGCCGCGCATACAGATAGTTCTGTAGCATCATGC
AACGGATTTGT----------------TCGCCTAAACCAATGTGT--G--TTTCGTTGTGCGTGCATGCATGCAGGGCTC
GATGACGGCACTGAAGTACACCACCCGGTCGACCAGGATCTACGTCGTCGTGGAGGGGCGCGACGGCTACTTCGAGATGG
CGTGCCCGCACATCTCCAGCTCCGGCCGTTCTGAACGCCGTGAGCACGAGCAAGAGCGCGAGCGCGAGCACGGGCAGGGC
AGGAGGAGCGAGGAGCGCGAGCGTGAGCAGGGGCGGGGCAGGAGGAGCGAGGAGCGCGAGCAGGAGCAGGGAAGGCAGGA
GGAGGAGCAGGGCCACGGCCGGGAGCAGGAGAAATCGAGGGGCTACAGGCAGGTGAGGGCCCAGATCAAGGTGGGGTCGG
TGATCGTGCTCCCCGCGGGCCACCCGGCGACGTTCGTGGCCGGGAACGACGGGAACCTCGCCCTGCTGTCCTTCGGCGTG
GGCGCCAACAACGACGAGGAGGTGTTCGTGACCGGCGGGAACAGCGTCCTGAAGCAGCTGGACGAGGCGGCCAAGGCGCT
GTCGTTCCCCCAGCAGGCGAGGGAGCTGGCGGACAGGGTCATCCGCGCGCAGCCGGAGTCCGTGTTCGTCGCCGGCCCGC
AGCAGCAGCGCCGCGTCGCCGACATGTGAGCGACGATCTCGAGCGTGCCGTGTGCAGTTCGTGGAGC----TGCATGCAT
GAGTGTACA------TGTGACGGGAATAAATAGCTAGCACGTACGGCACTGCC---TACTACAGTACTACGTGCGTGTAG
CAGAGGAGAGGAGAGACGATGCTCTGTGTACGGGATGTGCATGC-TTGTGTTCGTGTGCGTTT--------ATGCATGCA
TGCACGTGAGTTTTCTATGTATGTA-TAGTACGTGAGTTTTCCGGTAATAAAAGACGTGACCTTGCCCGTCTGCTCGTTG
GAACATGTCGGTGAAAATTGCAC---TTTTACTCCTACAGTGACGTGCACATATATCGATCGAGTGAGTGAAGTCTATTT
TAAACCCTGAAGTTGTAGAGCATGTCATGAATGAACCTTCACGTCTAAATCCCTGAAATTGATACCTGACTTCTTCAATC
CCGGTCATTTTTGACCTTTAGGCCGTATCCAAACAGAAAAGGCCGGGATGAGTGAATTGTGCAACACATGTTTTGGGGGC
CCACCTAGAGAAAGAAATAAAGAAATATTAAATATTTAAATTCCCTGAAATTGATACCCTGACTTCTTCAATCCCGGTCA
TTTTTGACCTTTAGGCCGTATCCAAACAGAAAAGGCCAGGATGAGTGAATTGTGCAACACATGTTTTGGGGGCCCACCTA
TCAGCATGAGAAAGAAATAAAGAAATATTAAATATTTAAATTTT-AAACCAGAGAACTCTGGGTTCAAGTTGTGCACGTC
CTAAGCCTGCGCTGGTGCATGCGCACGCTGTTGCGTCGCCGAACCTGGCTGTGGCACTGCGAATGGAGCAGGCCGCGACA
GGGATAATGGAGACGTGCCTGAGCGCGGCTACCCG--------------TGCGTGGCCTAATGTCGTTGTTGACTAGGCC
CTGATCACTCCACGGCGACTACTTTCCGGCGGTCGAACGCGTACATACACTGGCGAAGTAGTATGACATGTAGATTGCTT
TCCGGCGAGACGTGCAAATACACAAGCCAC
>chr5D_383
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--------------------------------------------------------------GATAGATAATGGGGTCGT
GACTCCCCCTAGTGAGGCCATGACTTCCCCCTAAGAT-AGATGGTGGGGGTATGACTTTTTCCAGCGAGGTCCATCTTCT
CTGGCGAGCTCGGATGAACTAGAATAGATGACTGCCGTGAATAAATTATTTTGGGTCTGTATGTCACATCTAACCTGATG
TTCACTATGTTTGTGGTCTATTTTTTTGTCCCAATTTTTTTCCTTGTTGCTGCGTTATTTGTGGGAGTTTAGACGTGACA
TCCTTAAAAACATCTAGATATGAATTAAACAAACTATAAATTTTTCAGGCACCTGATATATAGTTACATAAAGAAAA---
----------------CCATGCATGCGGGTTGATCGTGGATTAAACCCCAAGCATGCACGCATGCATGTAGTGACAAGAT
ACATAAATGCATC-----GATAAGGCTCTTGCAGGTGTGTAGTAGCTTCAACTTGGAGCATAGCTCCCAGCAAAAGAAAA
TTTCATTCCGCCGATGCAAAAGATCGTCGCCGAGCTATCCCATCCCTGCTCGGCTTGTTCCTATCTCAATCAA-CGTTGT
CCGTTCTCTGCAGATGGAGGCCAGCTATCTCGCATCGCATGCATGGCGCATGCCACCATGGCGCCGTGCATGCGGCGCTT
CTTCACCACGTACACACCCCGACCTACACCTGG------------CCT------------CCTCGCCGCATCGCCACCCG
CTATATATACCATCACTTGCCCGGAGCTA-GATCACCAACTCATCCAATAAGCCAACTCGTCACTGATCACCAACATCGA
TCACCATGAAGTCCACGGTAGTAAGATCGCCATGGCTAGCGCTAGCCCTCGTCCTCTCCCTGTGCCTCTCCCTCTCGTTC
GCGTCGTGGGATGCCGAGGACGAAGGTAGGGGTAGTAGGAGGTGGCAAGAAGGGGGCGACGA---AAGGCGGTCCGGCGA
AAGT---GGCCGGCCGTACCACTTCGGCGAGGAGAGCTTCCGGGAGTGGGCCAAGTCGCGGCACGGCCACTTCAAGGTGC
TGGAGCGGTTCGACCACGAGCTGCTCCGGGGCTCCATCGGCGACTACCGCGTGGCGTGCCTCGACGCGGCGCCGCGCGCG
TTCCTGCAGCCCAGCCACTACGACGCCGACGAGATCGCCTTCGTGAGGGAAGGCGAGGGCGTGCTGGTGCTGCTGAGGAA
CGGGAAGCGGGAGTCGTTCTGCGTCAGGGAGGGCGACGTGTTCGTGATCCCGGCCGGGTCCATCGTGTACTCCGCCAACA
CGCACCGCTCCAAGTGGTTCCGGGTCGTCATGCTCCTCAACCCCGTCTCCACGCCGGGCAGCTTCCAGGTGAGCCATG--
CATGGCCGCAGCATGCAAGCTCCTCCGCCATCTGCGTTGCATGCAACGA-----CTTACTTTTGGTATCTGTTCTTGATA
CGTTTGTAGGAGTTCTCCCCTATTGGGTTTGGAGGCGAGCAGCCGCAGTCGTTCTTCAGCGTATTCAGCGACGAGGTTAT
CCGGGCGGCATTTAACGTACGTACGCGCTGACCATCGGCACTGATTTTTGTTTGTTTGTTTG--------TTCATCGCTT
GATTCA-GCTCGATCTTATGCTTGTACGCGCTGACCGTCTGCATGCATGTGTTTCAATAGACTCGGCAGCGGGAGGATGT
GGACAGAGTGTTCGAGACGAAGAGCAGAGGTGAGGGTCAGATATCTGAGGGGTCGGAGGAGCAGATACGGGAGCTGAGCA
GGTCGTGCTCCAGGGGAGGACGCGGCGGTGGCGGCGGGTCGGGTTCCGAGAAGGAGGACATCCAGCCGCGCAGCCTCACC
GGCGAGAAGCCCCGCTACTCGAACAAGCACGGCAGGTTCCACCAGATCACCGGCGACCAGTGCCACCACCTCCGCAAGCT
CGACATGGATGTCACCCTCGTCAACATTACCCGGGTAAAGCATCCGCGCCGCACATACAGATAGTTTTGTAGCATCATGC
AACGGGACGGATTGGTGCTGGACCTAAGCGCCTAAGCCAATGTGTGTG--TTTCGTCGTGCGTGCATGCATGCAGGGCTC
GATGACGGCGCTGAGGTACACCACCCGGTCGACCAGGATCTACATCGTCGTGGAGGGGCGCGACGGCTACTTCGAGATGG
CGTGCCCGCACGTCTCCAGCTCCGGCCGTTCTGAACGCCGGGAGCACGAGCAGGAGCGCGAGCGCGAACACGGACACGGC
AGGAGAAGCGAGGAGCGCGG------GCAGGAGCACGGCAGGAGGAGCGAGGAG--------------------------
-GAGGAGCACGGCCACGGCGGCGAGCAGGAGAAATCGAGGGGCTACAGGCAGGTGAGGGCCCAGATCAAGGTGGGGTCGG
TGATCGTGCTCCCCGCGGGCCACCCGGCGACGTTCGTGGCCGGGAACGAGGGGAACCTCGCCCTGCTGTCCTTCGGCGTG
GGCGCCAACAACGACGAGGAGGTGTTCGTGACCGGCGGGAACAGCGTGCTGAAGCAGCTGGACGAGGCGGCCAAGGCGCT
GGCGTTCCCCCAGCAGGCGAGGGAGCTGGCGGACAGGGTCATCCGCGCGCAGCCGGAGTCCGTGTTCGTCCCCGGCCCGC
AGCAGCAGCGCCGCGTCGCCGACATGTGAGCGACGATCTCCAGCGCGCGCA-TGCGGTCCCTGGAGCTGCATGCATGCAT
GAGTGTACATGTGAGTGTGACGGGAATAAATAGCTAGCACGGT----ACTGCG---TACTACAG---TACGTGCGTGTAG
CAGAGGAGAGGAGAGGAGAGACG-----------------ATGC-TTGTGTTCGTGCGCGGTTATGCATGAATGCATGCA
TGCACGTGAGTTTTCTATGCATGTAGTAGTACGTGAGTTTTCCGGTAATAAAAGACGTGACCTTGCCCGTCGGCTCGTTG
GAACATGTCGGTGAAAATTGCAC---TTTTACTCCTACAGTGACGTG---------------------------------
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>chr5B_582
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-----------------CATGCATGCGGGCTGATCCTGGATTAAACCCCAAGCATGC----ATGCATGTAATGACAAGAT
AGATAAATGCATCAGATGGATAAGACTCTTGCAGGCGTCTAGTAGCTTCACCTTGGAGCATAGCTCCCAGCAAAAGAAAA
ATTCATTCCGCCGATGCAAAAGATCGTCGCCGAGCTATCCCATCCCTGCTCGGCTTGTTCCTATCTCAATCAATCGTTGT
CCGTTCTCTGCAGATGGAGGCCAGCTATCTCGCATCGCATGCATGGCGCATGTCACCATGGCACCGTGCATGCAGCGCGT
CTTCACCACGTACGCACCCCGACCTACACCTGG------------CCGCACGCATGGCCCCCTCGCCGCATCGCCACCCC
CTATATATACCATCACTTCCCCGGAGCTA-GATCACCAACTCATCCAATAAGCCAACTCGTCACTGATCACCAACATCGA
TCATCATGAAGTCCACGGTAGTAAGATCGCCATGGCTAGCGCTAGCCCTCGTCCTCTCCCTGTGCCTCTCCCTCTCGTTC
GCGTCGTGGGATGCCGAGGACGTAGGTAGGGGTAGTAGGAGGTGGCAGGAAGGGGGCGACGACGAAGGGCGGTCCGGCTC
CGGCTCCGGCCGGCCGTACCACTTCGGCGAGGAGAGCTTCCGGGAGTGGGCCAAGTCGCGGCACGGCCACTTCAAGGTGC
TGGAGCGTTTCGACCACGAGCTGCTCCGGGGCTCCATCGGCGACTACCGCGTCGCGTGCCTGGACGCGGCGCCGCGCGCG
TTCCTGCAGCCCAGCCACTACGACGCCGACGAGATCGCCTTCGTGAGGGAAGGCGAGGGCGTGCTGGTGCTGCTGAGGAA
CGGGAAGCGGGAGTCGTTCTGCGTCAGGGAGGGCGACGTGTTCGTGATCCCGGCTGGGTCCATCGTGTACTCCGCCAACA
CGCACCGCTCCAAGTGGTTCCGGGTCGTCATGCTCCTCAACCCCGTCTCCACGCCGGGCAGCTTCCAGGTCAGCCATG--
----GCCGCAGCATGCAAGCTCCTCCACCATTTGCGTTGCATGCAACGA-----CTTACTTCTGGTATATGTTCTTGATA
TGTTTGTAGGAGTTCTCCCCTATTGGGTTTGGAGGCGAGCAGCCACAGTCCTTCTTCAGCGTCTTCAGCGACGAGGTTAT
CCAGGCGGCATTCAACGTACGTACGCGCTGACCATCGGCAATGATTT-------TTTGTTTGTTTGTTTGTTCATCGCTT
GATTCAAGCTCGATCTTATGCTTGTACGCGCTGACCGTCTGCATGCATGTGTTTCAATAGACTCGGCAGCGGGAGGATGT
GGACAGAGTGTTCCAGAGGAAGAGCAGAGGTGAGGGTCCGATATCTGAGGGGTCGGAGGAGCAGATACGGGAGCTGAGCA
GGTCGTGCTCCAGGGGAGGACGCGGCGGCGGCGGCGGGTCGGGTTCCGAGAAGGAGGACATCCAGCCGCGCAGCCTCACC
GGCGAGAAGCCCCGCTACTCGAACAAGCACGGCAGGTTCCACCAGATCACCGGCGACCAGTGCCACCACCTCCGCAAGCT
CGACATGGATGTCACCCTCGTCAACATCACCCGGGTAAAGCATCCGCGCCGCGTATACAGATTGTTTTGTAGCATCATGC
AACGGATTGGT----------------GCACCTAAACCATCGCGTGTGTTTTTCGTCGTGCGTGCATGCATGCAGGGCTC
GATGACGGCGCTGAGATACGCCACCCGGTCGACCAGGATCTACATCGTCGTGGAGGGGCGCGACGGCTACTTCGAGATGG
CGTGCCCGCACGTCTCCAGCTTCGGCCGTTCTGAGCGCCGGGAGCACGAGCAGGAGCGCGAGCGCGAGCACGGACACGGC
AGGAGGAGCGAGGAGCGCGAGCGTGAGCATGGGCAGGGCAGGAGGAGCGAGGAGCGCAAGGACGAGCAGGGAAGACAGGA
GGAGGAGCAGGGCCGCGGCCAGGAGCAGGAGAAATCGAGGGGCTACAGGCAGGTGAGGGCCCAGATCAAGGTGGGGTCGG
TGATCGTGCTCCCCGCGGGCCACCCGGCGACGTTCGTGGCCGGGAACGAGGGGAACCTCGCCCTGCTGTCCTTCGGCGTG
GGCGCCAACAACGACGAGGAGGTGTTCGTGACCGGCGGGAACAGCGTGCTGAAGCAGCTGGACGACGCGGCCAAGGCGCT
GGCGTTCCCCCAGCAGGCGAGGGAGCTGGCGGACAGGGTCATCCGCGCGCAGCCGGAGTCCGTGTTCGTCGCCGGCCCGC
AGCAGCAGCGCCGCGTCGCCGACATGTGAGCGACGATCTCGAGCGTGCGCA-TGCGGTTCGTGGAGC----TGCATGCAT
GAGTGTACA------TGTGACGGGAATAAATAGCTAGCACGGT----ACTGCTGCCTACTACAG---TACGTGCGTGTAG
CAGAGGAGTGGAGAGACGATGCTCTGTAC---GGATGTGCATGCTTTGTGTTCCCGCGCGGTT--------ATGCATGCA
TACACGTGAGTTTTCTATGTATGTAGTACC---TGAATTTTCCGATAATAAAAGGCGTGACCTGGCCCGTCGGCTCGTTG
GAACATGTCAGTTGTACTACTACTATTTTTACTCGTACAGTGACGTGTCACA----------------------------
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>chr2D_3127
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--------------------------------------------------------------AGTGAGTGAAGTCTATTT
TGAACCCTGAGGTTGTAGAGCATGTCATGAATGAACCTTGACGTCCAAA-------------------------------
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-----------------------------------------TCCCTGAAATTGATACCCTGACTTCTTCAATCCCGGTCG
TTTTTTACCTTTAGGCCGTATCCAAACAGAAAAGGCCGGGATGAGTGAATTATGCAGCACATGTTTTGGGGACCCACCTG
TCAGCATGAGAAAGAAGTAGAGAAATATTAAATATTTAAATTTTTAAAGCAGAGAACTCCGGGTTTGAGTCGTGCACGTC
CTAAGCCTGCGCTGGTGCATGCGCACGCTGCTTCGTCGCCGAACCTGGCTGTGGCACTGCGAATGGAGCAGGCGGCGACG
GGGATCATGGAGACGTGCCTGAGTGCGGCTACCCG--------------TGCGTGGCCTAATGTCGTTGTTGACTAGGCC
CCGATCGCTCCACGGCGACTACTTTCCGGCTGTCGAATGCGTACGTACACTGGCGAAGTAGTATGACATGTGGATTGCTT
TCCGGCGAGACGTGCAAATACACAAGCCAC
>chr3D_3130
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-----------------------------------------------------------------GAGTGAAGTCTATTT
TGAACTCTGAGGTTGTAGAGCATGTCATGAATGAACCTTGACATCCAAA-------------------------------
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-----------------------------------------TCCTTGAAATTGATACCCTGACTTCTTCAATCCCGGTCG
TTTTTGACCTTTAGGCCGTATCCAAACAGAAAAGGCCGGGATGAGTGAATTATGTAGCACATGTTTTGGGGGCCCACCTG
TCAGCATGAGAAAGAAATAGAGAAATATTAAATATTTAAATTTT-AAACCAGAGAACTCTGGGTTCTAGTCGTGCACGTC
CTAAGCCTGCGCTGGTGCATG-GCACGCTGCTGCGTCGCCGAACCTGGCTGTGGCACTGCGAATGGAGCAGGCGGCGACG
GGAATCATGGAGACGTGCCT--------------G--------------TGCGTGGCCTAATGTCGTTGTTGACTAGGCC
CCGATCGCTCCACGGCGACTACTTTCCGGCGGTCGAATGCGTACGTACACTGGCGAAATAGTATGACATGTGGATTGCTT
TCTGGCGAGACGTGCAAATACACAAGTCAC
>chr2D_3130
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-----------------------------------------------------------------GAGTGAAGTCTATTT
TGAACCCTGAGGTTGTAGAGCATGTCATGAATGAACCTTGACGTCCAAA-------------------------------
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-----------------------------------------TCCCTGAAATTGATACCCTAACTTCTTCAATCCCGGTCG
TTTTTGACCTTTAGGCCGTATCCAAACAGAAAAGGCCGGGATGAGTGAATTATGCAGCACATGTTTTGGGGGCCCACCTG
TCAGCATGAGAAAGAAGTAGAGAAATATTAAATAATTAAATTTT-AAACCAGAGAGCTCCGGGTTCGAGTCGTGCATGTC
CTAAGCCTGCGCTGGTGCATGCGCACGCTGCTGCGTCGCCGAACCTGGCTGTGGCACTGCGAATGGAGCAGGCGGCGACG
GGGATCATGGAGACGTGCCT--------------GAGCGCGGCTACCCGTGCGTGGCCTAATGTCGTTGTTGACTAGGCC
CCGATCGCTCCACGGCGACTACTTTCCGGCGGTCGAATGCGTACGTACACTGGCGAAGTAGTATGACATGTGGATTGCTT
TCCGGCGAGACGTACAAATACACAAGCCAC
>chr1D_3134
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---------------------------------------------------------------------GAAGTCTATTT
TGAACCCTGAGGTTGTAGAGCATATCATGAATGAACCTTGACGTCCAAA-------------------------------
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-----------------------------------------TCCCTGAAATTGATACCCTGACTTCTTCAATCCCGGTCG
TTTTTGACCTTTAGGCCGTATCCAAACAGAAAAGGCCGGGATGAGTGAATTATGCAGCACATGTTTTGGGGGCCCACCTG
TCAGCATGAGAAAGAAGTAGAGAAATATTAAATATTTAAAGTTT-AAACTAGAGAACTCCGGGTTCGAGTCATGCACGTC
CTAAGCCTGCGCTGGTGCATGCGCACGCTGCTGCGTCGCCGAACCTGGCTGTGGCACTACGAATGGAGCAGGCGGCGACG
GGGATCGTGGAGACGTGCCTAAGCACGGCTACCCG--------------TGCGTGGCCTAATGTCGTTGTTGACTAGGCC
CCGATCGCTCCACGGCGACTACTTTCCAGCGGTCGAATGCGTACGTACACTGGCGAAGTAGTATGACATGTGGATTGCTT
TCCGGCGAGACGTGCAAATACACAAGCCAC
>chr3D_3135
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----------------------------------------------------------------------AAGTCTATTT
TGAACCCTAAAGTTGTAGAGCACGTCATGAATGAACCTTGACGTCCAAA-------------------------------
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-----------------------------------------TCCCTGAAATTGATACCCTGACTTCTTCAATCCCGGTCG
TTTTTGACCTTTAGGCCGTATCCAAACAGAAAAGGCCGGGGTGAGTGAATTATGCAGCACATGTTTTGGGGGCCCGCCTG
TCAGCATGAGAAAGAAATAGAGAAATATTAAATATTTAAATTTT-AAACCAGAGAACTCTGGGTTCGAGTCGTGCACGTC
CTAAGCCTGCGCTGGTGCATGCGCACGCTGCTGCGTCGCCGAACCTGGCTGTGGCACCGCGAATGGAGCAGGCGGCGACG
GGGATCATGAAGACGTGC-TGAGCGCGGCTACCCG--------------TGCGTGGCCTAATGTCGTTGTTGACTAGGCC
CTGATCGCTCCACGGCGACTACTTTCCGGCGGTCGAATGCGTACGTACACTGGCGAAGTAGTATGACATGTGGATTGCTT
TCTGGCGGGACGTGCAAATACACAAGCCAC
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------
--------------------------------S----S------------------------SS-S--------------
SSSS---------------------S-S-----S-SSSS-----------------------------------------
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----------------------------------------S-----------S---S------SS-S-SSSSS--SSSSS
SSSSSSSSSSSSSSSS--------------------S-------------------------------------------
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----------------------------------------------S---------------------------------
-----------------------------------S--------------------------------------------
---------------------S-----------SSSSSSSSSSSS------------------------------S----
-----------------S----S------S-----S-----------S-S--SS-S--------S-----------S---
----S---------S-------------S----------S-------S-------------S------------------
--------------------------S----------------------------------------------------S
----------------------------S---------S---------------------------------S-------
-------------------------------S-------------------------S----------------------
--------------S---S-------S-----------------S--------------------S---S----------
----------------------S----------------SS----------------S----------------------
-------S-----S---S----S---------S--S-----------------------S--------------SSSSSS
---------S--S----SS--S---S-------S----SSSSSSS-SSSSSSSS-------------------------S
----S-----------S--S------S-S-----S-----SS--------------S-----------------------
------S-----S-----S---------------------------S-----------------------S-----S--S
S--------------SSS-SS----SS-SSSSSS-SSSS-SSSSSS-SSSSS-SS-------------------------
------------S-----S--S----SS---------S------S-----S-----------------------------
-------------------------------------S------------------------------------------
-----------S-----------------------------------------S--------------------------
------------S-------------------------------S---------------------S-------------
--------S------------------S----------------------------S-----------------------
---------S----S----------------------------S------------------------------------
-----------S----------------------------S-----------S--------------------S--S---
----------------------------------S----------------------S--S-S-----------S-----
--------------------------------------------------------------------------------
-------------------------------------------------S------------------------------
-----------------------------------------------S--------------------------------
-S------------------------------------------------------------------------------
------------------------------------------------SSSS---S------------------------
-----------------------------------------SSSSSS-----S-----------SSS-------------
---------------------------SSSSS------------------------S---S-------------------
-----------------------------------------------------------------------S--------
-----------------------------------------------SSSSSSSSSSSSSSS------------------
-S-------------------------------------S-----S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------------------S
-------------------------------------S-------------S----S----------------------S
-------------------S----------------------------------------------S---S---------
------------------------------S------------------------------------------S-----S
-----S--------------------------------------------------------------------------
------S------------------------------S------S--------------------------S--------
------------------------------
>forward_996
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------GAGGCCAGCTATCTCGCATT--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------
>reverse_2041
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------TTTGTAACAGACTCGGCGGG--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------
>forward_1803
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------TCTGCCATCTCCGTTTGCAT-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------
>reverse_3553
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------ACAGAAAAGGCCGGGATGAG----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------
