>input_sequence_43313
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---------------------------ATGGCGGCCGGCGGGCTGGCGGGGACGGAGCTGGTCAGCACCGGCGGGGCGGA
GGCCGGCAACAACGCAAGGGTGACCGGCAGAGGGAAGAGGAAGGCGCTGCGGAAGGCCCGCCAGAAGAAGCCCTCGTCCT
ACAGGAGGGACGATCGCCGAGACCGCGAGGAGTTCATGCGGGCTCTCAGGGAGGAGGAGCCCATAGAGCTGAGGGAGGAG
GACGAGATCCCCGA-TTATCGCGAACTCTGGGACTGTCTCTACGCCGACCACTTCGGCTCCTTCGACGACCAAAGTGAGT
GTCAGTCGAATCTGTTCTCTTC-TTGCCGCGAATCAAATGATGAATTGGAGGGCGAAAGTCGATGCAGGGGAGTAAAGTG
AAGGGATTTTGTTGTCCTACACACGGCACTAGTAGTAATTTAGGAATCG------AATGATGAGTAATTTTGTTTTCCTA
CAATATACTCCCTCCTTTCCTAAATATAAGTCTTTTTTATAGATTTCAATGCGGACTACATACAGATACAGGTGTATATA
GACATACTTTAGAGTATAGATTCACTCATTTTGGTCTGTATGTAGTCCGTAGTGGAATCTCTAGAAAGACTTATATTTAA
GAACGGAAAGAGTAGATTATGTCAGAGACCTCTTTGCATAACGTAGGAGAATTA---GCCAACCCAGTCCATGTAA----
ATACCCGACAATGCTTGGATGGACAACAACATGGATGGTGATTGGTGAAACCACA--------------------ATCAC
AATTTTGCTTCCTGCAAGTATGGC-----ATGTAGTTTCCTGCTGACAAGCTCCTAGTGTTGCTATATAATTCTCT--TC
ACATTTTTTCTACATGTAGCGGCTCTTGGTCCCATGCGCCATACATTCGAACCCATCCCAAGCTACGCCGCTCCTGATTG
TACCTTGCAGATCTTCTACATCCGAGTCACCGAGATTAGCAAAGATGGTCTCCAGTGGCCTCTGCATGTCCATGGCTTGG
TTGCTGCGAGGGACTCTGTAGATCACAACCGCAACTTCCTCTTCAATCGCACTAGGGATGACTGTCAAACCCTCACCC-A
AGAAGTGAGCACCATCTATCTAAGCATGCCT-GTCTGCTTAGTTTGGCTTTCTTTCTTCCTTCTCCCACTGCTGTCTAG-
TATACTACTAGACTGTCAATTTGGTTGATTAACTGATGATGA---TGATGCTTGCAGGATCCATGGTTGATGTTAACCGG
CCCATCTCGTGCGCTCGTGTTAATTGATCCGATTGCGTTTGAAGTTCAGCTAAAAGTAAAGAGCAAAACAGAGCCTGGAA
AAGATGAACTGTTGGCTTTCAAAGTCTTCAGCTACCACAAAGCTTATCATTCTGATGAGGTGGAATCTACACGCATCACC
TGCAAGCGCTGCACGCTTGAGTTTGCATATGCGCCGTTGCTTCCTTCAGTCGAGGCCACTGTCACTGTCCAAGTTATTGA
TGGGTCATGGGACGACCATGTTCAAGGAGTTGTTACTTGCCGCACTGCCAGCATGGAAAATGGGGAGATGGTGTTGCTTG
CTTCTCGAGATGGAAAAATGCCTGTCAACTCG--GATGGTGTGATTGAGCTTTCAAGGCGCGTTGTTTCTGTAGAATTAA
GGGGACAGCTGTTGGTTTCCGTGCTGGGCCGTGGGACGGGTGATAAGAAAGGTTTGGTCGCGACAGATACCGCTCTCTTT
ACACAGATGAATGCCGGCACGAGTCATGGCGTATGTGATCTTGGTTTCTGCAAGGTGCAAGTTACTGTTGCTTGGTCCTT
TCTTTCTACCCTGGCAGACATGCTGCTTTCTGCTTAA-------------------------------------------
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>chr5D_1_TraesCS5D01G328900
CCTCTCTCCGTCCACTGCTCCTGTGGTTGATGGAGGGGGGTTGGCTCCTATTTCTCCTCCTGTTGTTCCTTAGGTTTAGG
GCTTCGTCTTCGTCTACTAGTACCAATTTGGTGAGATTGATGTTGCGTCGAATAAGGTGGTGTCGGTCTCTTCCTCGCCA
CAGCGA---------------CGTTTTTCCTGGCGGCACAACTGAGCTGATG----TGTCTTCTTGTCGTTTGTTTGGAC
CGGTCGGCCTTATGCTTCTTGTGTCTGCTGGTTGTCGGCTCTTATGGCGTCGTCGTC-AAGTGTGACAGATTGGTGCTGG
TACAAGGTTCGTGGCCCGACGGCTGTGGACTTGGCGTTTCC-CCCCAACAACAACGGCGGGATATGTTAGATATGTATCC
AGGTTGGCGCGGGGAACATCCTCGGCCGACATGCCACATCGTCAAGT------GCCTGTTTTGCAGGTCTGGTCTTCGGC
TCACAACGCCTACAAGGCTATGGTGCTGGTCTGGATTTGGTTT-GCTGGTGCTCCACCTCTTTCCTC-GTGT-GCGTCTC
GGTGGCGCTGACTGTTGACGGCGACTTCAGATTTGGTTGTTTGCAGGGACT-----------------------------
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-------------------------------------------------------AAGGACTTATTTATTATATATTTTT
ATGTAGGGTTTTTTCTACGGTGTTTACTGTACATCTCCCGGTCTTTGTGCTTGTTTTCGCTTGTGTATGTGCAATTGTAC
TCTGTTTTATATTAACTAATACG---------------------------------------------------------
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-------------------------------------------------TACAATATGTGAGGTCAAGAAAAGATATTTC
C-----TTAAAAAAATAAAAAGACGCGCGCGCATCCGGCCGGACTCGTCCCGCTCGAGCCCATCCGTACTCTTGCCGAGT
CGAACACGAGCGTTTGTGTTCGCGTTCGGTTGTGCTACTCCCGACCCGAGCCACGAGC--TGGCCCGAGCCGAAGGTGAT
CGATCCAGAGCCGCCGCGCACCCCCAATTTCGAAGGAGAAAAAGAAGAAAGGAAATAGAAAAAAACAGAAAAGCGAGGGG
GAAAAACCCTAGGAGACGAAGGGGGATATGGCGGCCGGCGGGCTGGCGGGGACGGAGCTGGTCAGCACCGGCGGGGCGGA
GGCCGGCAACAACGCAAGGGTGACCGGCAGAGGGAAGAGGAAGGCGCTGCGGAAGGCCCGCCAGAAGAAGCCCTCGTCCT
ACAGGAGGGACGATCGCCGAGACCGCGAGGAGTTCATGCGGGCTCTCAGGGAGGAGGAGCCCATAGAGCTGAGGGAGGAG
GACGAGATCCCCGA-TTATCGCGAACTCTGGGACTGTCTCTACGCCGACCACTTCGGCTCCTTCGACGACCAAAGTGAGT
GTCAGTCGAATCTGTTCTCTTC-TTGCCGCGAATCAAATGATGAATTGGAGGGCGAAAGTCGATGCAGGGGAGTAAAGTG
AAGGGATTTTGTTGTCCTACACACGGCACTAGTAGTAATTTAGGAATCG------AATGATGAGTAATTTTGTTTTCCTA
CAATATACTCCCTCCTTTCCTAAATATAAGTCTTTTTTATAGATTTCAATGCGGACTACATACAGATACAGGTGTATATA
GACATACTTTAGAGTATAGATTCACTCATTTTGGTCTGTATGTAGTCCGTAGTGGAATCTCTAGAAAGACTTATATTTAA
GAACGGAAAGAGTAGATTATGTCAGAGACCTCTTTGCATAACGTAGGAGAATTA---GCCAACCCAGTCCATGTAA----
ATACCCGACAATGCTTGGATGGACAACAACATGGATGGTGATTGGTGAAACCACA--------------------ATCAC
AATTTTGCTTCCTGCAAGTATGGC-----ATGTAGTTTCCTGCTGACAAGCTCCTAGTGTTGCTATATAATTCTCT--TC
ACATTTTTTCTACATGTAGCGGCTCTTGGTCCCATGCGCCATACATTCGAACCCATCCCAAGCTACGCCGCTCCTGATTG
TACCTTGCAGATCTTCTACATCCGAGTCACCGAGATTAGCAAAGATGGTCTCCAGTGGCCTCTGCATGTCCATGGCTTGG
TTGCTGCGAGGGACTCTGTAGATCACAACCGCAACTTCCTCTTCAATCGCACTAGGGATGACTGTCAAACCCTCACCC-A
AGAAGTGAGCACCATCTATCTAAGCATGCCT-GTCTGCTTAGTTTGGCTTTCTTTCTTCCTTCTCCCACTGCTGTCTAG-
TATACTACTAGACTGTCAATTTGGTTGATTAACTGATGATGA---TGATGCTTGCAGGATCCATGGTTGATGTTAACCGG
CCCATCTCGTGCGCTCGTGTTAATTGATCCGATTGCGTTTGAAGTTCAGCTAAAAGTAAAGAGCAAAACAGAGCCTGGAA
AAGATGAACTGTTGGCTTTCAAAGTCTTCAGCTACCACAAAGCTTATCATTCTGATGAGGTGGAATCTACACGCATCACC
TGCAAGCGCTGCACGCTTGAGTTTGCATATGCGCCGTTGCTTCCTTCAGTCGAGGCCACTGTCACTGTCCAAGTTATTGA
TGGGTCATGGGACGACCATGTTCAAGGAGTTGTTACTTGCCGCACTGCCAGCATGGAAAATGGGGAGATGGTGTTGCTTG
CTTCTCGAGATGGAAAAATGCCTGTCAACTCG--GATGGTGTGATTGAGCTTTCAAGGCGCGTTGTTTCTGTAGAATTAA
GGGGACAGCTGTTGGTTTCCGTGCTGGGCCGTGGGACGGGTGATAAGAAAGGTTTGGTCGCGACAGATACCGCTCTCTTT
ACACAGATGAATGCCGGCACGAGTCATGGCGTATGTGATCTTGGTTTCTGCAAGGTGCAAGTTACTGTTGCTTGGTCCTT
TCTTTCTACCCTGGCAGACATGCTGCTTTCTGCTTAACAGCTGTGTCTGGAGGGTGTCGGGGATAGTTTTCGACCAACCT
GTTTAGCCTTTTTAGTGGTGTTTCTAACTCGTAAACTGTTGAAGAACCGGTGGTGTTTTGTAGCGGCTCAGATGGTGTCT
AAGCAGCCCAGTTGTTGAGCTTATACCTGTCTGTTCTTTTTATTGGTTATTATTACCTGTCCATTGGTACAACTGTACAA
GTAAACCTGCAAAATTTTGTACTGTAAA--AAAAACCCTGCAAAGTTTTGTACTGACAGCACCCCATCTACTGATGGAAC
TTGCTGTCAATGTTTTGTGGCGGTCTCAAATGCAGTATCTGCTAATTTCGTTGATCCGTGTTTGCGTGTTAGTGTATACA
TGAACATACACTTGTTCTGAATTAGTTGTGCAGCACAGATGTAACTGAAACAATAC--AGTTGC----------------
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-------------TCAGCACACCTG-------------------------------------------------------
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-----------------------------------------------------------------AAACTATACATAACT
ATTATAAACCATTTGCAATCACTAGAACCAAAGCATTGCCATGGTTTCACATTTCAGTTCAGCTGTATGTATTT----TT
GATTGCTTACCATCTCTGACAAGGTTTCCATGTTGGCCCAAAATTTCCAGATCATCATATATGTTCCCTGAGTCACGACA
TGAAACCGATGATCTTAGCTAGTTTGTTATCCAAAGTACTTAAAATGTTATTGACATTTATCAAAGGCCAGGCAATAAGG
TTTTTTCTGATATCAAGTAGATTAGAAACAGAGCAAAATGATGCTATTTCTATGTAGGGTACAACTAAGGTACAGTATCA
AAGCTGTCAGTTCTCGTTTAGTTCAAGCTGTGTGCTGTATCCGGTGGGACCTTGTAAATTTATGTAAACTAACTTTTCAT
AGTAAAATATTTTGTTCCACCTAGGTATATTTATTGATCCTCTGATGCAGGTTCAGCAATAACTGATATTGTAATTGACT
GGCCCGCTTACCAAACTATGAAGCAGTTAGTGAAATGATGAGTTCTTCAGCAGTAAGTCTCTTTTTTGTTTTTC
>chr2A_1
CCCCTCTTCGTCCGCTGCTTCGACGGCTGCTGGAGAGGGGTGGGATGGTGTTTCCATTCCTGTTGTTCCACTGATTTAGG
GCTTCGTTTTCGTTTAGTAGTACCAATTTGGTGAGATTGATGTTGCATCGAATAATGTGGCCTCGGCCTCTTTCTCACCA
CGGCGA---------------TCTTCTTTTCGGCGACGC--CTGAGCCGATGGTCTCGTCTGCTTGCCGTTCGTTCGGAC
TGATAGGCCTTATGTTTCTTGTGTCTGGATGTTGTCGTCTCTCATAGCGGCGCCGAT-AAGTGGGACAGATTGATGCTGG
TATAGGGTTGGTGGCCCGACGACTGCAGATTTGGCGTTCTTCTCCG-TCAACGGCGGCGAAATGCGTTAGATCTGAATCC
AGGTTGGCATGTGGAACATTCTCGGTCGACACGCCACATCGTCAAGC------GCCTATTCTACAGGTCTGGTCTTCGGC
TCACAATGCCTACAAGGCTATGGCGTTGGCCTGGATTTTGATTTGCTGGTGCTCTGCCTCTTTCCCCGGTGT-GCGTCTC
AACAACGCGGGTGGTTGACGGCTATTGCAGATTTGGTTGTTTGCAG----------------------------------
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>chr7D_4
---CTCTCCGTCCGCTGCTCCGGCGGCTGGAGGAGCGGGGTGGGCTCCCGTTTCTCTTCCTGTTGTTTCTTAGATATAGG
GTCTCTTCTTTGTCTAGTAGT-CCAAATTGGTGAGACTAGTGATGTGTCCAATAAGGTGGCTTCATTCTCTTCCTCACCA
CAGTGA---------------CGCCG---------------CTGAGCCGATGGCCTCGTCTGCTTGCCGTTCTTTCAGAG
GGATAGGCCTTGTGTTTCCTGTGTCTGGCGGTTGTCGCCTCTCTTGTCGTCACCGGC-AAGTGGGACTGATTTGTGTTGG
TACAAGGTTGGTGGCCCGACAGCGGCATATTTGGTGTTTTC-CCCT-GCAACATCAGCGGGATGCATCAGATCTAGATCC
AGGTTGGCGTAGGAAATGTCCTCGGCCGGCACGCCACATCGTCAAGC------GCCTGTTTTGCAGGTCTGGTCTTCGGC
TCACAACGCCTTCAAGGCTATGGCGCTGGTCTGGATTTTGGTT-GCTGGTGCTCTGCCTCTTCCTTCGGTGT-ACATCTC
TACGGCACTAACGGTGGATGGCAATTTCAGATTTGGTTGTTTGCAGGG--------------------------------
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>chr1B_4
---CTCTCCGCCCGCCGCTCTAGCGGCTGGAGGAG-GGGGTGGGTTCGTGCTTATCTTCCAGTTAGTCCATAGATTTAGG
GTCTCGTCTTTGTCTAGTAGC-CCAGTTTGGTGAGTTTGGTGCTTCGTCGAATAAGATGGCTTCAATCTCTTC-TCACCA
TGGGAACGATCTCTCTGGCAGCGCCG---------------TTGAGCTGATGGCCTCGTTTGCTCGCCATTCATTTGGAG
CGGTGAGCTTTATGTTTCCTGTGTCTGGCGGTCATTACCATTCAAGGCAGCGTCAGC-AAGTGGGACATGTTGGTGCTGG
TTCAAGGTTGGTGGCCCGATGGCGGTGGATCTGGCGTTCTTGCCCG-GCAACGACGGCGGGATTCGTCAAATCTAGATCC
AGATCAGCGTGGGGAACATCCTCGGCCGACATGCCACATCGCCAAGT------G----TTCTGTAGGTCTGGTCTTCGGC
TCTCTACGCCTTCAAGGCTATGACGCTGGCCTGGATTTTGGTTTGTTGGTATTCCATCTCTTTCTTCGGTGTTGTGTCTC
GGCGATGTTGGTGGTCGAACGCGGTTCCAGATCTGGTTGTTTGCAGGGACCTTA--------------------------
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-------------------------------------------------------AGGGACTTATTCATAACATTTTTGT
ATTTGGGT------------------------------------------------------------------------
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>chr7D_75
--------------------------------------------------------------------------TTTAGG
GCTTTGGCTTTGTCTAGTAGCATCAATTTTGTGAGGTTGGTGCTACATCGAATAATATGGCCTTATTTTCTTCCTCACAA
CGGCGACGTTCTTTCTGACCGCGCCG---------------CTTAGCCGATGGTCTTGTTTGCTTGTCGTTCATTCGGAC
TGGTAAGCCTTATGTTTTTTGTGTTTGGCGGTTGTCGTCACTCATGACAGCGCCGACAAAGTGGGACAGGTTGATGCTGG
TACATGGTTAGTAGCCCGACGGCAGCAGATTTGGCTTCCTTTCCCG-ACAATAGTGGCGGATTACGTCACTTCTAGATCC
AGGTCGGCGCGAGCAACATCCTCGGCCGACATGCCACATCGTCAAGCGCAAGCGCATGTTCTGCAGATCTTGTCTTTGGC
TCACAATGCCTACAAGGCTTTGGCGTTGGCCTGGAGTTTGGTTTGCTGGTGCTCCATCTCTTCCCTCGGTAT-GTGTCTC
ATCGGCGCTGGCGGTCGACGGTGATTTTAGATTTGGTTGTTTGCAGGGTCT-----------------------------
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>chr5B_370
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----------------------------------------------------------------------ATATGTATCT
AGGTCGGCACGGGGAACATCCTTGACCGACACGCCACATCGT------CAAGTGCCTGTTTTGCAGGTCTGGTCTTCGGC
TCACAACACCTACAAGGCTATGGCGATGGTCTGGATTTGGTTT-GCTGGTGCTCCGCTTCTTTCCTCGATGT-GTGTCTC
GGCGGCGCTGACCGTCAACGGCGGCTCCAGATTTGTTTGTTTGCACGGACTAAGGCCTTGTTTGATAGTTCTGCATTTTC
TATGTATTTGGAGAATATTGTTCTATGTATTTGGAGAATACTATAGTTTTTTCAAATATCATGGTTTTAATTACAATGAG
CTGTTTGGTTCCCACAAAAACCGTAGCTTTAATACTACAGTATTCCCCAAAACGCAATTTTTCCTCTGTTTAAAGAAAAG
AACCCCAAACCTCTTTTTTTTTTAACTGAACAGGCGAGAAAACAGGCCCGTCTCGTTCTTCTTCCTCGTTTGCTTCCAAG
CCGCCGCTACTGCTCTCTCGTCGCTGGAGATAGGCGCGCTCTCTCGTCGCGCTGGAGATAGTCTCACCGCTGCTCCTTCG
TTCGCTTCCAAGCCGCCTCCTTTCTTGCTTGATGCATTACGTGTCATTCTATGTTTGAAGTAATGCTTGGGAGGAGACAC
CAATCGAATCCATTGCAAGGCGTCGAGCTTGACCGCACGGTTCCAGTTTATGCGCAGCTCCACGTGGTGCGCCGCCGGCT
ACACCGTGTTGCGGGCTGTGAGGTCCTAGCTCCACGGGTAGCTCATGATGCCCCTTGACAGCAGCACAGAAGAGTGCCAA
TGAGTTCGTGAGGTGACACAAGTCAGTGTTGTGGTAGTTCGACTGCCTCCTCTTTGGTAAGCTACAGCCCAACCATTGGC
ATAGTCATTGCAGTTTGGCAGTGGCCTTTGTGCGTGGTCATTCAAAGTTTGTGCATGTGGGTGGCCTTTGTGCATGGCCG
TTGAGTATGTAACAGCTGGGTAGCTAAAGAGAAAACGGCTAGCTAGCTAACCGGTTTACGTAGATATATGCAGCACCAGC
CAAACAACTCAAAGTATTTTTAATGCTTCAAAATATTGTGATATATCAAAACAGTGGTATTTTATATCTACATGCAAAAA
TATTGTAATTTTTCAATACTGTGGGTTCTTAATACTTCACTATCAAACACAGCCTAAGGACTTATTTGTTATATATTTTT
ATGTAGGGTTTTTTCTACAATGTTTACTGGACATCTCCCAGTCTTTATGCTTATTTTCGCACGTGTATGTGAAGTTGATT
CCCACTATCCTATTTATCTCTACATGCCCACATGCCACCTCATCAAGACCAACCACTACATGCATGAGTATTTTTTTATT
ATTATTAGTTCATCTCATGCACACCTTTCACCTCACCATCATAGAACCTCATCAAAAGTCTACTCAACAAGCATGCTTTT
TTTTCCATCACGTTATGCCACTTATATTCAAAATGTCTTCGGACTATGCAATAATTAAATACAATATATATGTATATATA
TATATAGATAAAACTGTGTTTGTTTTTAGCTTTAGTTCATATATTATTAATTCAACGATGAAGCTTTATACAATCAAATC
CCTGAAATATACTGCTATTGATTTCCGCAACAACGCACGGGCTATCATCTACAATATGTGAGGTCAAGAAAAGATATTTC
TT-------AAAAAAAAAAAAGACGCGCA--CATCCGGCCGGACTCGTCGCGCTCGAGCCCATCCGAACTCTTCCCGAGT
CCAACACGAGTGTTTGTGTTCGCGTTCGGTTGTGCTACTCCCGACCCGAGCCACAAGC--TGGCCCGAGCCGAAGGTGAT
CGATCCAGAGCCGCCGCGCACCCCCAATTCCGAAGGAGAAGAAAGGACGGAGAGGGG-----------------------
----AACCCTAGGAGATGAAGGGGGAGATGGCGGCCGGCGGGCTGGCGGGAACGGAGCTGGTCAACACCGGCGGGGCGTA
GGCCGGCGAAAACCCAAGGGCGACCGGCAGAGGGAAGAAGAAGGCGCTGAGGATGGCCCGCCAGAAGAAGCCCTCGTTCT
ACAGGAGAGACGATCGCCCAGACCGCGAGGAGTTCATGCGGGCTCTCAGGGAGGAGGAGCCCATAGAGCAGAGGGAGGAG
GACGAGATCCCCGA-TTACCGCGAACTCTGGGACTGTCTCTACGCCGACCACTTCGGCTCCTTCGACGACGAAAGTGAGT
GTCAGTCGAATCTGTTTTCCTC-TTGCTGCGGATCCAATGATGAACAGGTGGTCGAAAGTCGATGCAGGGGAGTAAAGTG
AAGGGATTTTGTTGTCCTACACACGTCATTAGTAGTAATTTAGGAATCAAAATCAAATGATGATGAATTTTGTTTTCCTA
CAATATAT------------------------------------------------------------------------
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---------------ATACTGTCAGAGACCTCTTTGCATCATGTAGGAGAATTA---CCCAACCCAGGCCATCC----AC
ATACCCGTCAATACTAGAATCCACGGCAACATGGATGGTGAAACCACCAATATGTTACT-CTGTAGACTCTGGTCATCAC
AATTTTGCTTCCTGCAAGTAGGATTGCGTGTGTCG-TTCCTGCTGACAAGCACCTAGTATTGCTGTCTAATACTCTTATC
ACAATTTTTCTTCATTCAGCTGCTCTTGGCCCCATGCGCCATGCATTCGAACCCATCCCACAGTACGCCGCCCCTGATTG
TACCTTGCAGATCTTCTACATCCGAGTCTCCGAGATCGGCAAAGATGGTCTCCAGTGGCCTCTGCATGTCCATGGATTGG
TTGCTGCCAGGGACTCCGTAGATCACAAGCGTAACTTCCTCTTCAATCGCACTGCGGATGATTGCCAAACCCTCACCCAA
AGAAGTGAGCACCATCTATCTAAGCATGCCTTGTCTGTTTTGTTTGGCTTTCTTTCTTCCTTCCTTATTCTGCTATGTGC
TATACTGCCAGACTGTCGGTTTGGTTGATTAACTGATGATGATTGTGATGCTTGCAGGATCCATGGTTGATGTTAAATGG
CCCATCTCGTGCGCTCGTGTTAATTGACCCGATTGCATTTGAAGTTCAGCTAAAAGTAAAGAGCAAAACAGAGCCTGGAA
AGGATGAACTGTTGGCTTTCAAAGTTTTCAGCTACTACAAAGCTTTTCATTCTGATGAGGTGGTATTTACACGCTTCACG
TGCAAGCGCTGCACGCTTGAGTTTGCATATGCGCCGCTGCTTCCTTCAGTCGAGGCCACTGTCACTGTCCAAGTTATTGA
TGGGTCATGGGACGACCATGTTCAAGGAGTTGTTACTTGCCGCACTGCCAGCATGGAAAATGGGGAGATGGTGTTGCTTG
CTTCTCGAGATGGAAAAATGCCTGTCAACTCG--GATGGTGTGATTGAGCTTTCAAGGCGCGTTGTTTCTGTAGAATTAA
GGGGACAGCTGTTGGTTTCTGTGCTGGGCCGTGGGACGGGTGATAAGAAAGGTTTGGTCGCGACAGATACCGCTCTCTTT
ACACAGATGAATGCCGGCACGAGTCATGGCGTATGTGATCTTGGTTTCTGCAAGGTGCAAGTTACTGTTGCTTGGTCCTT
TCTTTCTACCCTGGCAGACATGCTGTTTTCTGCTTAACAGGTGTGTCTGGAGGGTGTCGGGGATAGTTTTTGACCAACCT
GTTTAGCCTTTTTAGTGGTGTTTCTAACTCGTAAACTGTTGAAGAACCGGTGGTGTTTTGTAGCAGCTCAGATGGTGTCT
AAGCAGCCCAGTTGTTGAGCTTATACCGGTGTCTAAGCGGCTCAGAT---------------------------------
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---------------------GGTGTCTAATGCAGTATCTACTAATTTATTTGATCCGTGTTTGCGTGTTAGTGTGTACA
TGAACATACACTTGTTCTGAATTAGTTGTGCAGCACAGATGTAACTGAAACAATGC--AGGTTTGTTTGCATTTCAAATC
TCGTGATTCTTTTCCACTCCCAACTCCCATGTTCCACAACAAACACATTTATGCAGTTTTTATTCATCTATGATATCCTA
CGAGGGCACTGATTCGATAAAAGTAATACGGCACATTGCAAGATTGGTGTGCGTCCGTTTTCACCGACATATTTGTTGCA
TGTGGCTCAGCAGTCAGCACACCTGAAAGACAGTTTGATATTGGGTTAGTAGAAGAGATCAACCATATGGCGCAGT----
AACCACACCAGGTGCCTCGCATACCTTCTAGTGCTGACTCAGGACACCTGAAAGACAGCATGATAATGAGTTTAATGACA
AGTAACA------------------------------------------------------ACCAAAACTATACATAACT
A-TATAAACTATTTGCAATCACTAGAACCAAAGCATTGCCATGGTTTCACATTTCACTTCAGCTGTATGTATCT----TT
GATTGCTTACCATCTCTGACATGGTTTCCGTGTTGGCCCAAAATTTCCAGATCATCATCT-TGTTCCCTGAGTCATGACA
TGAAACCGATGATCTTAGCTAGTTTGTTGTCCAAAGTACTTGAAATGTTATTGACATTTATCAAAGGCCAGGCAATAAGG
TT-TTTCTGATATCAAGTAGATTAGAAACAGAGCAAAATGATGCTATTTCTATGCAGGGTACAACTAAGGTACAGTATCA
AAGCTGTCAGTTCTCGTTTAGTTCAAGCTGTGTGCTGTATCCGGCGGGACCTTGTAAATTTATGTAAACTAACTTTTCAT
AGTAAAATATTTTGTTCCACCTAGGTATATTTGTTGATCCTCTGATGCAGGTTCAGCAATAACTAATATTGTAATAGACT
GGCCTGCTTGCCAAACTATGAAGCAGTTAGTGAGATGATGAGTTCTTCAGCAATAAGTCGCATTTTTACTTTTC
>chr5A_711
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--------------------------------------------------ACAATGTGTGCGATCAAGAAGAAAAAAAGT
TTCTTTTTAAAAAAAAAGAAAGACGCGCGCGCATCCGGCCGGAATCGTCCCGCTCGAGCCCATTCGTACTGTTCCAGAGT
CGACCACGAGTGTTTGTGTTCGCGTTCGGTTGTGCTACTCGGCTACTCCCGAGCCGCCTATGGCCCGAGCCCAAGGTGAT
CGATCCAGAGCCGCCGCGCACCCCCAACTCCGAAGGAGAAGAAAGGAGAGGGGGGG------AAACAGAGAAGCGAGGGG
GAA-AACCCTAGGAGATGTTGGGGGAGATGGTGGCCGGCGGGCTGACGGGGACGGAGCTGGTCAGCACCGGCGGGGCGGA
GGCCGGCAACAACCCAAGGACGACCGGCAGAGGGAAGAAGAAGGCGCTGACGATGGCCCGCGAGAAGAAGCCCTTGTCCT
ACCGGAAG---GATCGCCCAAACCGCGAGGAGTTCATGCGGGCTCTAAGGGAGGAGGAGCCCATAGAGCTGAGGGAGGAG
GACGAGATCCCCCGGTTACCGCGAACTCTGGGACTGTCTCTACGCCGACCACTTCGGCTCCTTCGACGACGAAAGTGAGT
GTCAGTCGAATCTGTTTCCATCTTTGCTGCGAATCAAATGATGAAC--------------CGATGCTGGGAAGTAAAGTG
AAGGGATTGTGTTGTCCTACACATGGCACTA---GTAATTTAGGAATCA------AATGATGAGTAGTTTTGTTTTCCTA
CAAAATGT------------------------------------------------------------------------
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---------------ATTCTGTCAGAGACCTCTTTGCATAACGTAGGGGAATTATTAGCCAACCCAATCCATGTACGTAC
ATACCCGTCAATGCTTGGATGGACGACAACATGGATGGTGAAACCACCAATAATATTACGCTGTAGACTCTAGTCATCAC
AATTTTGCTTCTTGCAAGTAGGATTCTGTATGTAGTTTCCTGCTGACATGTACCTAGTATTTCTGTCTAATACTCTTAGC
ACAATTTTGCTTCATGCAGCGGCTCTTGGCGCCATGCACCATACATTCGAACCCATCCTGCGCTACGCCACTCCTGATTG
TACCTTGCAGATCTTCTACATCCGAGTCACCGAGATCAGCAAAGATGGTCTCCAGTGGTCTCTGCGTGTCCATGGATTGG
TTGCTGCCAGGGACTCCGTAGATCACAATCGCAACTTCCTCTTCAATCGCACTAGGGATGACTGCCAAACCCTCACCC-A
AGAAGTGAGCACCATCTATCTAAGCATGCCTTGTCTGTTTTGTTTGGCTTTCTTTCTTCCTTCCTTATTCTGCTATGTGC
TATACTGCTAGACTGTCGATTTGGTTGATTAACTGATGATGATTGTGATGCTTGCAGGATCCATGGTTGATGTTAACCGG
CCCATCTCGTGCGCTCGTGTTAATTGACCCGATTGCGTTTGAAGTTCAGCTAAAAGTAAAGAGCAAAACAGAGCCTGGAA
AGGATGAACTGTTGGCTTCCAAAGTTTTCAGCTACTACAAAGCTTTTCATTCTGATGAGGTGGTATCTACACGCGTCACC
TGTAAGCGCTGCACGCTTGAGTTTGCATATGCGCCGCTGCTTCCTTCAGTCGAGGCCACTGTCACTGTCCAAGTTATTGA
TGGGTCATGGGACGACCATGTTCAAGGAGTTGTTACTTGCCGCACTGCCAGCATGGAAAATGGGGAGATGGTGTTGCTTG
CTTCTCGAGATGGAAAAACGCCTGTCAACTCGCGGATGGTGTGATTGAGCTTTCAAGGCGCGTTGTTTCTGTAGAATTAA
GGGGACAGCTGTTGGTTTCTGTGCTGGGCCGTGGGATGGGTGATAAGAAAGGTTTGGTCGTGACAGATACCGCTCTCTTT
ACACAGATGAATGTCGGCACGAGTCATGGCGTATGTGATCTTGGTTTCTGCAAGGTGCAAGTTACTGTTGCTTGGTCCTT
TCTTTCTACCCTGGCAGACATGCTGCTTTCTGCTTAACAGGTGTGTCTGGAGGGTGTCGGGGATAGTTTTCGACCAACCT
GTTTAGCCTTTTTAGTGGTGTTTCTAACTCGTAAACTGTTGAAGAACCGGTGGTGTTTTGTAGCGGCTCAGATGGTGTCT
AAGCAGCCCAGTTGTTGAGCTTATACCTGTCTGTTCTTTTTATTGGTTATTATTACATGTACATTGGCACAACTGTACAA
GTAAACCTGCAAAATTTTGTACTGTAAAAAAAAAACCCTGCAAAGTTTTGTACTGACAGCACCCCATCTGCTGATGGAAC
TTGCTGGCAATGTTTTGTCGCGGTCTCTAATGGAGTATCTGCTAATTTATTTGATCCGTGTTTGCGTGTTAGTGTATACA
TGAACATACACTT-TTCTGAATTAGTTGTGCAGCACAGATGTAACTGAAACAATACAGAGGTTTGTTTCAATTTCAAATC
TCGTGATTCTTTTCCA-------CTCCCATGTTCCACAACAAACACATTTATGCAGTTTTTATTCATCTATGATATCCTA
CGAGGGCACTGATTCGATAAAAGCATTAC-GCACATTGCAAGATTGGCGTGCACT-GTTTTCACCGCCATATTTGTTGCA
TGTGGCTCAGCAGTCAGCACACCTAAAAGACAGTTTGATATTGGGTTAGTAGAAGAGATCAACCATATGGCGCAGTGGTC
AACCACACCAGGTGCCTCGCATACCTTCTAGTGCTGGCTCAGCACACCTGAAAGACAGCATGATAATGAGTTTAATGACA
GGTAACAAGCTTGTAAAAATTGTGCCACATACCAGCCATGTCAGAGTAGCAGTAGCTTATTACCAAAACTATACTTAACT
A-TATAAACCATTTGCAATCACTAGAATCAAAGCATTGCCATGGTTTCACATTTCAGTTCAGCTGTATTTATTT----TT
TATTGCTTACCATCTCTGACAAGGTTACCATGTTGGCCCAAAATTTCCAGATCATCATATATGTTCCCTGAGTCACGACA
TGAAACCGATGATCTTAGCTAGTTTGTTGTCCAAAGTACTTGAAATGTTATTTACATTTATCAAAGGTCAGGCAATAAGG
TT-TTTCTGATATCAAGTAGATTAGAAACAGAGCAAAATGATGCTATTTCTATGTAGGGTACAACTAAGGTACAGTATCA
AAGCTGTCAGTTCTCGTTTAGTTCAAGTTGTGTGCTGTATCCGGTGGGACCTTGTAAATTTATGTAAACTAACTTTTCAT
AGTAAAATATTTTGTTCCACCTAGGTATATTTGTTGATCCTCTGATGCAGGTTCAGCATTAACTGATATTGTAATTGACT
GGCCCGCTTACCAAACTATGAAGCAGTTAGTGAAATGATGAGTTCTTCAGCAGTAAGTCTCTTTTTTGTTTTTC
>chr5D_3236
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-----------------------------------------------------------------AAACTATACATAACT
A-TATAAACCATTTGCAATCACTAGAACCAAAGCATTGCCATGGTTTCACATTTCAGTTCAGCTGTATGTATTTTTGATT
GATTGCTTACCATCTCTGACAAGGTTTCCATGTTGGCCCAAAATTTCTAGATCATCAT--ATGTTCCCTGAGTCACGACA
TGAAACCGATGTTCTTAGCTT--------------GTACTTGAAATGTTATTGGCATTTATCAAAGGCCACGCATTAAGG
TT-TTTCTGATATCAAGTAGATTAGAAACAGAGCAAAATGATGCTATTTCTATGTAGGGTACAACTAAGGTACAGTATCA
AAGCTGTGAGTTCTCGTTTAGTTCAAGCTGTGTGCTGTATCCGGTGGGACCTTGTAAATTTATGTAAACTAACTTTTCAT
AGTAAAATATTTTGTTCCACCTAGGTATATTTGTTGATCCTCTGATGCAGGTTCAGCAATAACTGATATTGTAATAGACT
GGCCCGCTTACCAAACTATGAAGCAGTTAGTGAAATGACGAGTTCTTCAGCAATAAGTCTCATTTTTGTTTTTC
>SNPs
--S----------S-------S-S--S--S-----S-----S-------S------S----------------S------
----------------S-------------------------------------------SS--------------S---
-------------------------S--SSS----S-S-SS--------------------S---------S--------
----S---------S------------SS--------S----S------------S-------S----------------
---------S-------------------S---------S-----SS-----------------S---------------
--------------------------------------------------------------------------------
-----------------------S--------------------------------------------------------
--S---------S-------------------------------------------------------------------
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------------------SS---------S---------S------S-----S-------SS---------S-S---SSS
S-SSS-S-SSSS-SSS-SSSSSS---------------------------------------------------------
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S--------------S---------------------------------------------------------S------
----------S-------------------------------------------S-------------------------
-----------------------------S----------S--SSSSS-S---SSSSSSSSS-------S----------
---S------------S---------S-----------------------------------------------------
-------------S------S-----------------S----------S---S--------------------------
------------------S-------------------------------------------------------------
------------------S---------------------------------------------------S---------
----------------S--S-------S-----------------SS--S--S---------------------------
------------------------------------------------S-------------------------------
-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSS---S--------------------------------------------------------S----
-------S----------------S----------------SSSSSSS--SS-S--------------------------
--------------------S-SS---------------------------S------S-----S-S----S--------
---S-------S----S------------S------------------------------S-------------------
------------------------------------S--------------------------------------S----
-------S--------S-----------S-----------------------------------S---------------
-------------------------------------S--S----------------------SSSSSSSSSSSSSSS--
------S----------S--------------------------------------------------------------
---------------------------S----------------------------------------------------
-S-----------------------S---------S---------S-----------------S----------S-----
------------------------------------S-------------------------------------------
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-------------------S------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------S---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------S---S------S------------
---------------------------------------------------------------------S----------
------S-----------S--------S--------------------SS------------------------------
------------------------------------------------------------S-SS----------------
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-S------------------------------------------------------------------------------
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----------------------------S------------S--------------------------------------
--S-----------------------------------------------------------------------------
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--------------------------------S-----------------------------------------------
--------------------------------------------------------------------------
>forward_2154
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------------------------------------------------------CGAGCCCATCCGTACTCTTG------
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>reverse_3212
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-----------ACATGTAGCGGCTCTTGGTC-------------------------------------------------
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>forward_2347
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-------CCTAGGAGACGAAGGGGGAT-----------------------------------------------------
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>reverse_3797
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------------------------------------TTGCTTCCTTCAGTCGAGGC------------------------
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>forward_3517
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---------------------------------------------------------TCCTTCTCCCACTGCTGTCT---
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>reverse_4530
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-------------------------------------------------GTTGATCCGTGTTTGCGTGT-----------
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--------------------------------------------------------------------------
