>input_sequence_43252
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-----------------------ATGGAGATGGAGAGAGTTTGCAACAGACGAGCGGGCATGCCTCCTGCTCTCCTTCTC
GCCCTTCACGGCATCGACGAGCAGATGATGCCTGCGTCATCG------------CTGCCGCCGCCACAGACCCCCATGGA
GCCCATGGAGTACCTGTCCAGGTCCTGGAGCGTCTCCGCCGACGACATATCCAAGGCCCTGCTGCTCAAAGGGGACACCA
AGCGGAGCTTCTTCGCCCCCGCCGACGCTCTTCTTCCGCCAT------CCCCCATGCCGGAGACGATGACCTCCTCCTCC
TACGAGCTCCTCGCCGCCCCCGCAGCTTCCAGTCATCATCAGATTCACCACCAACAT----GTGACCAATCACTTG----
-----CTTCCTTCTTTTCTGCTTTTCCTTGCTAGCTAGTTGTTACTCTCTGCAAC---AT----GTATGCGTCCGTCAAG
TTGGAGAGAACAAATTGAGATGCAA--------------------AACCATGGCTGATTTGCCTGCTGTTGCTTACCCAG
C-CATCTCTGCTCTGCAGCTAGATGC---AAAAGGGAGGGGCTCCATCAGCTGCCACCGCCACTCCAACTCGGTGACCAG
GTGGTACTTCCAGCACAAGGAGGCCGCCAAGCACGGCAGGAAGGAGAAGGCGCGCGCCGACCGGGCCCAGGCGCACGCCA
TGGTCTCCGTGGCCCAGGTGTCCGCCGCGGTTGCCGCTGTCACAGCAGCCACCAGCTTTGACAACCAGGACTCCAAGATA
GCTGCAGCCATGGCGTCGGCCACCGAGTTGCTGGCCTCGCACTGTGCCGAGGCAGCCCAGCTTGCAGGGGCAGGCCATGA
GCAGGTGTCCTCTGCTGTCCGGTCTGCGGTCGGTGTCACAGGCCCAGGTGATCTGATGACGCTCACAGCGGCCGCGGCGA
CAGGTGAGAAATCCCCATAAATTGTCATCACACTCAAATTCATCTGCTGTT-----------------ATATGATAAATG
GCTGAGTTGTGTGCCCCCTGATGATATTGTGTGCAAAGCTTTGAGAGGAGCTGCGACGCTGAAGAAGAGGGTCCAGCGCG
AATCGAGAAGCAATGCCAGCGTCATTCCTTACGAGAAGGCCCCTTCGTCATGGAGTCCTGATATCTGGTGCAAGGAAGGC
AAGCTGCTAAAACGCACAAGAAAAGGTCAGAGCTACTGAACTATTGAGAGCA-TTTAATTACATTCTGCTGACAACAAAA
TCTGAACTTCTGAAGCATCATCAAGAGACCTGACACGCAAAC-TTTTGTTCCTGAATCAGGGGATTTACACAAGAGACGG
GTATCAATCTACATCAACAAGAGGTCACAGGTAGGGCAATTTCCCTCCAAAGCTAAATTTGTAATAGATGTTCATCTA--
-----------AACTCTGGCCAGTTCTGGTGAATACATGTTCATTTATATACAAAATCATATATCAGTTAACAGTAAGTA
CGGATAATTACAGGTCATATTGAAGCTGAAGAGCAAACACATGGGAGGTGCACTATCAAAAAACAATAAAAGTAGGTTTA
GCTGTTTCATATCTCATCAGTTAATACCTGATGTCGATGCTTCTTGAGTCTGAATACTGACTTTATGCTTCAAAATACTT
ACAGGTGTCGTTTACGGGGTATACAGTGAGCTCCCAGAGTGGACTGAGCCAGGGAAATGTTTACCAGAGACATGCTGCTT
TGGCTTGAGTACAGCACAGGGCCTGATTGAGTTCAAGTGTGAGAGCAGCAGCAGTAAACAGAGCTGGGTTCATGGCGTGC
AAAATCTGCTCCAGCAGGTTGATGTAGCTGACCAAGTAGGGCACAGGCTAGAAACACTAAAACTCAACTGGTGCAGTTAG
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>chr4B_1_TraesCS4B01G373700
GGAACAGACGTGGAAACGGAACTTTCTGTTTCCATAAATATGGAATTTCCGTTTCTACTATAG---------------GT
AGCCCAACTACCAAAGAATACACAATGGCACAATGGGTAGAATGAGCAGAATTGATCATTTGAGGACCAACTTTTACTAC
CACACACGTACTCAACTTATACCCTATACGGGATTGTCATGTACTACTACAATACTATCCTATGTTGCTAACATAACCAT
TTTATTTTGCAGTCATGTTAACAATTTCATAAAAAAAATTTGTTTTTTGTTTATATTTCTCTATGATTCAA-GGAGGTTT
AAAGTTCTGGTCAACAAACCGTTTTGTTTCCGTGTCCGCTCTATATTCGCTCTGTGTCTGTTTCCGGTAGT---------
---ATTTGTTTCCGGGGTTTCTATATTCGTTTCCGCTTCTACAAAAAATTATGAAAACAAATATGGTAACACCCAATTCC
GTCCGTTTCCGCGCCGTTCTCATCCCTAGTTACCACCACAAGCACCCCTATCTTCATTAATTTGCTGTCACATAAGCAAA
CTAACTTGTATTAGGGTGTGTTATGTTACTT----CCACTATGACTAGCCTCGTTAGCAG--------AAAGAGGAGGCA
CTAGTAGCACTAAGG--AGGTTGACCGGAGCACAGGAGGACAGGCGCCTCCAGAGTCCAGACACAAGGAGAAGGTAGAGC
CTTCCATCATCTTGGGACGTGACGGGACCCATGCATGTCACCTCCTCTAACAACCTCCCAAATGAATGCACGACGGGTT-
-----------AACCAACGGGGTAGAGGAGGGAGA--CAGGGCAGAAAAGATTACCTGGGACTCACTTGTCCCCCTCGTG
TCCCCTCGATCGCGCATGCATCACCATCACCATCACCATACATTGCAGATTTGCAGCTGACCCTGTGCTCTGCTCCTCCG
-CTCCCTCCTCTCATATAATATAACTCTGGCTAGCCTACCGCTGGTGCCCAACAAGGACACTCACACTCTGCTGCTGCTG
CTTGGTTGCCATTCA------CCATGGAGATGGAGAGAGTTTGCAACAGACGAGCGGGCATGCCTCCTGCTCTCCTTCTC
GCCCTTCACGGCATCGACGAGCAGATGATGCCTGCGTCATCG------------CTGCCGCCGCCACAGACCCCCATGGA
GCCCATGGAGTACCTGTCCAGGTCCTGGAGCGTCTCCGCCGACGACATATCCAAGGCCCTGCTGCTCAAAGGGGACACCA
AGCGGAGCTTCTTCGCCCCCGCCGACGCTCTTCTTCCGCCAT------CCCCCATGCCGGAGACGATGACCTCCTCCTCC
TACGAGCTCCTCGCCGCCCCCGCAGCTTCCAGTCATCATCAGATTCACCACCAACAT----GTGACCAATCACTTG----
-----CTTCCTTCTTTTCTGCTTTTCCTTGCTAGCTAGTTGTTACTCTCTGCAAC---AT----GTATGCGTCCGTCAAG
TTGGAGAGAACAAATTGAGATGCAA--------------------AACCATGGCTGATTTGCCTGCTGTTGCTTACCCAG
C-CATCTCTGCTCTGCAGCTAGATGC---AAAAGGGAGGGGCTCCATCAGCTGCCACCGCCACTCCAACTCGGTGACCAG
GTGGTACTTCCAGCACAAGGAGGCCGCCAAGCACGGCAGGAAGGAGAAGGCGCGCGCCGACCGGGCCCAGGCGCACGCCA
TGGTCTCCGTGGCCCAGGTGTCCGCCGCGGTTGCCGCTGTCACAGCAGCCACCAGCTTTGACAACCAGGACTCCAAGATA
GCTGCAGCCATGGCGTCGGCCACCGAGTTGCTGGCCTCGCACTGTGCCGAGGCAGCCCAGCTTGCAGGGGCAGGCCATGA
GCAGGTGTCCTCTGCTGTCCGGTCTGCGGTCGGTGTCACAGGCCCAGGTGATCTGATGACGCTCACAGCGGCCGCGGCGA
CAGGTGAGAAATCCCCATAAATTGTCATCACACTCAAATTCATCTGCTGTT-----------------ATATGATAAATG
GCTGAGTTGTGTGCCCCCTGATGATATTGTGTGCAAAGCTTTGAGAGGAGCTGCGACGCTGAAGAAGAGGGTCCAGCGCG
AATCGAGAAGCAATGCCAGCGTCATTCCTTACGAGAAGGCCCCTTCGTCATGGAGTCCTGATATCTGGTGCAAGGAAGGC
AAGCTGCTAAAACGCACAAGAAAAGGTCAGAGCTACTGAACTATTGAGAGCA-TTTAATTACATTCTGCTGACAACAAAA
TCTGAACTTCTGAAGCATCATCAAGAGACCTGACACGCAAAC-TTTTGTTCCTGAATCAGGGGATTTACACAAGAGACGG
GTATCAATCTACATCAACAAGAGGTCACAGGTAGGGCAATTTCCCTCCAAAGCTAAATTTGTAATAGATGTTCATCTA--
-----------AACTCTGGCCAGTTCTGGTGAATACATGTTCATTTATATACAAAATCATATATCAGTTAACAGTAAGTA
CGGATAATTACAGGTCATATTGAAGCTGAAGAGCAAACACATGGGAGGTGCACTATCAAAAAACAATAAAAGTAGGTTTA
GCTGTTTCATATCTCATCAGTTAATACCTGATGTCGATGCTTCTTGAGTCTGAATACTGACTTTATGCTTCAAAATACTT
ACAGGTGTCGTTTACGGGGTATACAGTGAGCTCCCAGAGTGGACTGAGCCAGGGAAATGTTTACCAGAGACATGCTGCTT
TGGCTTGAGTACAGCACAGGGCCTGATTGAGTTCAAGTGTGAGAGCAGCAGCAGTAAACAGAGCTGGGTTCATGGCGTGC
AAAATCTGCTCCAGCAGGTTGATGTAGCTGACCAAGTAGGGCACAGGCTAGAAACACTAAAACTCAACTGGTGCAGTTAG
GGTTAGTACATGAACCCAAATTTTGCAGGACAGAGGGTGTATTAA--------GACGCGTGCTTTGCAACATCAGTGTAC
GCAAATAAATGTCAAAGCATGTTTTGCGCAGGTGGTATGTAACAGTAACACTGCTTGATTATTCTCATAAGTTCAGCCCA
GGTTAAGATACACCTAATGGCTCGACGTGAGTATATTAACAAAA------------------------------------
-------------------------------------------------------------------------GAATAAT
GTATTGCTAGTTTTGGAAAAAGAATACACATCGTAAAAATTCATAAAAAAAAAAAGGGTTCAAAACACAACAGTCTTCAT
CACTTCATATGGTAGCACACGGAGCTCGCAGTATGACTTGATAGCTTCTGCTAGGCACTGCTTCTCAAGGTTCTCAGACT
TGACAACAAAGCTATGTAATGTGTCCCTGTGAGAAACCCGTTCAACCTGCATCAGATGCAAAGGAGAAGACATAAAACTT
CCAACTCCCAGCTGGAATAAGCGGGACAAAAAAGCATTGGTTTAATAAAGATTCAGCACAGCATGTGCATCTTCACTAAG
CAG--------ATTATCCCACAGCAGTTTTAATGTGAAAGTGGTCAAGCATGACATTATTTTGGATATAAATCGATGCTA
AAAAATCCCACAAAGGGAAAATGATAAAGAACGTCCTAAAGAGACGTTAACCCAAGTTGGTGAAAATAAAGCAATTCCAC
GTTG-ACTGGTGATTTGATTCATGTCCAAACTATCATTAAAACTGAGCACAC----------------------------
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-----TAGGAGTTTGTAAATGACAGATAAACAATTAAGGCACTTAAGTTAAACATTATGCGAAAAATATTATTACCATCT
GCTCAATGATTGGCCCAGCATCAAGTTCTGGAGTAACAAAATGGCTAGTCGCACCAATCAACTTCACCCCAGCATTGAAG
GCCTGAAAGAAGTTACATAATTTGCACATTT----AGAAACAACAGAAAAAT-CAGATTAGGTTCACAATGTAAT-AATT
TCAATACCTGTCTAGAAGGACTTCCTCCTTTGAACGAGGGAAGAA
>chr1D_1
GGAACAGACGTGGAAACAGAACTTTCCGTTTTCGTGAATATGGAATTTCCATTTCTATTATAGGCCCATGGCTGCTTTGT
AGCCCAACTACCAAACAACACACAATGACACAATGAGTATAATGAGCAGAATGGATTATTTGAGGACCAACTTTTACTAC
CACACATATACTCAACTAG-ACCCCATACGGAATTGTCATGTATTACTACAATACTACACTATGTTGCAAACACAACCAT
ATTATTTTATAGACATGTTAACAATTCCATAAATTTG-TTTGCTTTTTGTTTGTATTTCTCTATGATTCAACGGGGGCTT
TAAGTTCCGGTCAACGTGCAATTTTGTTTCCGTGTCCGCTCTATATTCGCTCCGTGTCTGTTTTCGGTACTATCTGTTTC
CGCATTCGTTTCCGGGGTTTCTATATTCGTTTCCGCTTCTGCAAAAAAATATGGAAACAAATATGGTAGCACCCAGTTCC
GTCCGTTTCCGCGCCGTTTTCATCCCTA----------------------------------------------------
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>chr5A_512
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-----------------------------------------------------------ATTTTCTGTCACATAAGCA--
--AACTTGTCTTAGGGTGTGTTATGTTACTCCCACCCACTATGACTAGCCTCATAGCTCATTAGCAGAAAAGAGGAGGCA
CTCGTAGCAGTATAACAAGGTTGACCGGAGCACAGGAGGACAGGCACC-------TCCAGACACAAGAAGAAGGTAGAGT
AGAGCCTTCGG---------GACGGGACCCATGCATGTCACCTCCTCCCAGATGC------ATGCATGCATGACGGATTA
ACAAATGCAGCAACCAACGGGGTAGAGGTGGGAGAGACAAGGCAGAAAAGATTACCTGGGGCTCACTTGTCCCCCTCCTG
TCCCCTCGATCGCGCATGCATCGCCATCACCGTACCATACA---------TTGCAGCTGACCCTGTGATCTGCTCCTCCC
TCTCCCTCCTCCCATATAACC-----CTGGCTAGCCTACGCCTGGTGCCCAACAAGGACACTCACACT------CTGCTG
CTTGGTTGCCATTCACCATGGAGATGGAGATGGAGAGAGTTTGCAAGAGACGGCCGGGCATGCCTCCTGCTCTCCTTCTC
GCCCTTCACGGCATGGATGAGCA---GATGCCTGCGTCATCGACTGCAGCGGCCGTGCCTCCGCCGCAGACCCCCGTTGA
GCCCATGGAATACCTGTCCAGGTCCTGGAGCGTCTCCGCCGAGGAGATATCCAAGGCCCTGCGGCTCAAAGGGGCCACCA
AGCGGAGCTTCCTCGCCCCCGTCGACACTCTTCTTCCACCACGCACGGCCACCATACCGGATACGGAGA---CGTCCTCC
TACGAGCTCGTCGCCTCCCCTGCCGCTTCCGTTCACCAGCTCCAGCGCCAACAACAT----GTAACCAATCAATCCACAC
CGTCTCTTGCTTCTTCCCTTCTTTTTCTG-----------------CTCTGCACATATAT----GTATGTGTCAATCAAG
TTGGAAACAACAAATTCAGATGCAAAAGAGTTAGTAGTAAGTAGTAACCATTTCTCATCTGCTTGTTGTTACTTACCCAG
C-CATCTCTGCTCTGCAGCTAGATGC---AACAGGGAGGAGCTCCATCAGCTGCCACCGCCACTCCAACTCAGTGACCAG
ATGGTACTTCCAGCACAAGGAGACCGCCAAGCACGGCAGAAAGGAGAAGGCGCGAGCCGACCTGGCCCAGGCACATGCCA
TGGTCTCCGTGGCCCAGGTATCCGCCGCGGTTGCCGCCGTCACCGCGGCCACCAGCCGGGACAATCAAGACTCCAAGATA
GCTGCAGCCATGGCGTCGGCCACCAAGCTGCTGGCTTCGCACTGCGCTGAGGCGGCCCAGCTTGCAGGGGCTGGTCATGA
GCAGGTGTCCTCTGCTGTCCGCTCTGCGGTTGGTGTCACGGGCCCGGGTGATCTGATGACGCTCACAGCGGCCGCAGCGA
CAGGTGAGAAATCCCCATAAATTGTCATCACACTGAAATTCATCTGCTGTTACATGATAAACGGCTGAA-----------
------TTGTGTGCCTCCTGATGATATTGCGTGCAAAGCTTTGAGAGGAACTGCGACGCTGAAGAAGAGGGTCCAGCGCG
AGGCCAGAAGCAATGCAAGCGTCAGTCCTTATGAGAAGGCCCCTCTGTCCTGGAGTCCTGATATCTGGTGCAAGGAAGGC
AAGCTACTAAAACGAACAAGAAAAGGTGAGAGCTAATAAACTATTGAGAGCA-TTTAATTACATTCTGCTGACAATAAAA
TCTGAACTTCTGAAGCATGATCAAGAGACCTGACACGCAAAC-TTTTGTCCCTGAATCAGGGGATTTACACAAGAGACGG
GTATCAATCTACATCAACAAGAGGTCACAGGTAGGGCAATTTGCCTTCAGAGCTTCATTTGTAATAGGAG--AAAAGGTT
TACACTTATATAACTC---------------------------------TAGAAAATCATATATGAATTAACAGCAAGTT
TGGATAATTACAGGTCATATTGAAGCTGAAGAGCAAACACATTGGAGGTGCACTATCAAAAAACAATAAAAGTAGGTTTA
GCTGTTTCATATCTCAGCAGTTAATACCTGATGTCGATGCTTCCTGAATCTGAATACTGATCTGATGCTTGAAAATACTT
ACAGGTGTGGTTTATGGGGTATACAGTGAGCTCCCAGAGTGGACTGAGCCAGGGAAATGTTTACCAGAGACATGCTGCTT
TGGCTTGAGTACAGCACAGGGCCTGATTGAGTTCAAGTGTGAGAGCAGCACCAGTAAACAGAGCTGGGTTCATGGCGTGC
AAAATCTGCTCCAGCAGGTTGATGTAGCTGACCAAGTAGGGCACAGGCTAGAAACACTAAAACTCAACTGGTGCAGTTAG
------TACATGAATACAAATTTTGCAGGACAGAGGGTGTATTAGGATTTTAGGACAAGTGCCTTGCACTATCAGTGTCT
GCAATAAACAA-CAAATTATGTTTTTGGCAAGAGGTATGGATTAT------TGCTTGATTATTCTCATAACATCAACCCA
GGTCAAGATACACCTAATGGCTCGACGTGAGTATATTACTCCCTCCGTTAGTTTTTATAAGACGTTCAGACAACTTACTT
TGTGCTGTTTTTGAACAGTGTCTGAAAGTCTAAAACGTCTTATAAAAACTAACGGAGGTAGTACTTAATTAACGAATAAT
GTACTGCTAGTTTTGGAAAAAGAATACACATTGTAACAAT---TAAT-AAAAAAAGGGTTCAAAACACAACAGTCTTCAT
CACTTCATATGGTAGCACACGGAGCTCGCGGTATGACTTGATAGCTTCTGCTAGGCATTGCTTCTCAAGGTTCTCAGACT
TCACAACAAAGCTATGTAACGTGCCCCTGTGAGAAACCCGTTCAACCTGCATCAGATGCAAAGGAGAAAATACTAAATTT
CCAACTGGCTATTGGGATAAGCGAGATAAAAAATCATTGGTTTAATAAAGCTTCAGCATAGCATGTGCATCTTCACGAAG
CAG--------ACTATTCCACAGCAGTTTTAATATGAAAGTGGTCAAGTATGACATTATTTTGGATATAAATCGGTGGTA
AAAATTCCCACAGAGGGAAAATGATAAAGAACGTCCTAAAGAGATGTTAACCCAAGTTGGTGAAAA-AAAGCAATTCCAG
ATTG-ATTGCCAATTT-ATTCATGTCCAAACTATCAGAAAAACTGAGCAAAATATTATTACCATTTGCTCAATGATTGGC
CCAGCATCAAGTTCTGGAGTAACAAAATGGCTAGTCGCACCAATCAACTTCACCCCAGCATTGAAGGCCTGAAAGAAGTT
ACACAATTTAAAATTTTAAAAAGACAATTAATCAGATTAGGTTCACAAATAAAGACCGTGATTATTAATAGCTGTCTAGA
AGGATTTCCTCCTTTGTGGACAGTTTCAATACCTGTTACAAATGTGAATATTAATAATATCTTTCCCGTATGATTGAAGA
AAGCTGTCAGACATTACCTGCAAGAAAAAATGATTTGTGTCACCAATATCTGTGCGGCAGAAATCTGTATTACATGCTAT
GCTAGAACAAGGAAAATAAAGACCGTGACAAAATAAACTTACCTGCATATATCTCGCCAGCACAACGAAATCTGTACCTT
CAATCGGTTCTAATATCTCTTGTTCTCTTTTATTCGCAGAAGTCGTTGGTAAGTACTGATAGGGTATTTCGTGCCTCTGA
AGAAAACGCATGACATGATTATCTGTAGGTCGATCGTGGTTGCTGTACAAGAAAATAAAGAGCATATCAACTTGAGGAAA
AGCATATTCTGATAAGCAAAAGGTAACAGGGCCCGAAGAAAGGCTTATATGATTCATTCACCTTATCACATGGGAAGATT
AGAAGATATATGATTCTTACGTACTTTTAAGAGAAGATTAGAAGGTAAGATGCGGCTAAAAGAGAGGCACCTTGATACAT
GAGCTGAGGAGGAGCCTAGTCTCACCATTAGTAGGTAGAGTCCTTCCCCCCATTTTCTCTGGGGAAACTTTCTTATGACC
CCCAGGGGCAGGGAGAGTTGCCGCCCTTCCATCGACCCTTGTCCGAAAAGAATGCTTCATCTTTTGAAATCAAATCAAAT
GATAAGACCAACCAAACCAATTGAGCTCCGTGCAGCGGCAGTAGAAAAGGCAATGCAGTGCGAGGACCACCACCTACCTC
CTACCCTCCGTCTTCATCATGGCATGGCATGGCATGCATCTTCTCTCTTAACACAAAAGTATTGCTGCAAACGACAACCT
AGTCTTATCACCACCTGATTCTCCTCCTCCCTCTTAGTATTATAGCAGAAGAAAAGGCACTAAATGGGTAGTGACGAGGT
TGACCGGAGCAGACACAAGATGAGGAGCCTTCCATTCCATTCCATCATACTGGGACGGGGCGGGACCCAAATGCACGCAT
GACTGGTTAACAACTCTCTGCGCCACCTAACTGTCATTAGGGAGACAGGGCAGCGAAGATTACCTGGGAGCTGTCCCCCT
GCCTTCACGCGCATGCATCACCATCACCATCACGGCATCACCATACATTGTAGCTAGCACACTAACCTTGCTGCTGACCC
TGTGCTCTGCTCCTCCGCTCCCTCTCCCTCCTCTCCTTCCATATAACCCTGGCTAGCCTACCGCGCTGGTGCCCAGTAAG
GACATTCACACTCTGCTGCTGCTTGGTCGCCCTTGGCCATGGACATGGACAGAGTTTGCAAGAGACGGCTGGGCATGCCT
CCTGCTCTTCTTCTCGCCCGTCACGGCATGGATGACCAGATGCCTGCGTCGTCAGCGGCGGTGCCTCCGCCGCAAACCCC
CATGGAGCCCATGGAGTACCTGTCCAGGTCCTGGAGCGTGTCCGCCGACGAGATATCCAAGGCTCTGCTGCTCAAAGGGA
GCAGCAAACGGAGCTTTTTCGCCCCCGTTGACAGTCTTCTTCCACCACACACGACTGCCTTGCCGGAGACAGAGACCACC
TCCTACGAGCTCCTCGCCGCACCCGCCGCCTCCGGTCAACAGCTCCAGCACCAACATGTAACCAATCAATCCACATCGTC
TCTTGCTTCTTTCCTTTTTTTCTGCCTGCTCTTACTTATCTGCAAGTGTCGATTAGGTTGGACCAAAAAAAAAAACAAAT
TAATTGAAATGCAATAGAGTTTGTAACTATTTCTGCTCTGCAGCTAGATGCAACAAGGAGCTCCATCAGCTGTCGCCGCC
ATTCCAACTCGGTAACCAGGTGGTATTTCCAACACAAGGAGGCTGCAGGCCACAGGGGAAGAGACAAGGCACGCGCCGAC
CGAGCCCAGGCGCACGCGATGGTCTCCATGGCCCAGGTGTCCGCCGCGGTAGCAGCCGTCACTGCAGCCACCAGCTGTGA
CAGCCAGGACTCCAAGATAGCTGCAGCCATGGAGTCTGCCACCAAGCTTCTGGCTTCACACTGCGCCGAGGCAGCCCAAC
TTGCAGGGGCTGGTCATGAGCAGGTGTCCTCTACTGTCCGGTCTGCAGTTGGTGTCACCGGTCCGGGTGATCTGATGACG
CTCACAGTGGCCGCAGCGACAGGTGAGAAATCCATAGCTGCCATAGCACTGAAATCCATATGCTGTGTGTATCAATGGTA
TACGAAAGATGATTGAATTCTGTGCCCCCTGATGATACTGTGTGCAAAGCTTTGAGAGGAGCTGCGGCGCTGAAGAAGAG
GATCCAGCGCGAGGCGAGAAGCAATTCCAGCGTCATTCCTTATGACAAGGCCCCTTCCTGGAGTCCTGATATCTGGTGCA
AGGAAGGCAAGCTGCTAAAACGCACAAGAAAAGGTGAGAACTATTCCCTCCGTTCCAACATAAGTGTCACGGTTTTAGTT
CAAATTTGAACTAAAACACTTACTTTGGAACGGATGGAGTACTTAACTATCTGGAACATTTAATTACATTTTGATGGAAC
TAAATCTGAACTTCTGAAGCATGATCAAGAGACCTGACAAGCAAACTTTTGTTCCAATCAGGGGATTTACACAAGAGACG
GGTATCAGTCTACATTAACAAGAGATCACAGGTAGGGCATTCCCCTCCTTGGCTTCATTTGTAATAGGACACAAAAGGTT
TACGGTTATATAACTCTGCCCAATTCTGGTGAACATGTGTACACTATATACAATTGAATATCAATTAACAGTAAATATGG
ATAATTACAGGTCATATTGAAGCTGAAGAGCAAACACATTGGAGGTGCGCTATCAAAAAACAATAAAAGTAGGTCGACAA
TTTTCTGCTTTACATCTCAACGATCAATACCTGATGGCAATGCTTCCTGGAATCAGAATACTGACCTTATGCTTGAAAAT
ACTTGTGGTTTATGGGGTATACAGTGAGCTCCCAGAGTGGACCGAGCCAGGGAAAGGCTTACCAGAGACATGCTGCTTTG
GCTTGAGTACAGCACAGGGCCTGATTGAGTTCAAGTGTGAGAGCAGCACCAGTAAACAGAGCTGGGTTCATGGTGTGCAA
AATCTGCTCCAGCAGGTTGATGTAGCTGACCAAGTAGGGCACAGGCTAGAAACACTAAAACTCAACTGGTGCAGTTAGTA
CATGAATACAAATTTTGCAGGACAGAGGGTGTATTAGGAGTTTAGGACAAGTGCTTTGCACTATCAGTGTCTGCAATAAA
CAACGAATTGTGTTTTTGGCAAGAGGTATGTAATATTGCCTGATTATTCTCATAACTTCAACCCAGGTTAAGATACACCT
AATGGCTCGACGTGAATATATTAACAAAAGAATAATGTATTGCTCATTTTTGAAAGAAAAAAAGAATACACATCGTAATA
ATCCATAAAAAAATCAAAACACAACAGTCTTCATCACTTCATATGGTAGCACACGGAGCTCGCAGTATGACTTGATAGCT
TCTGCCAGGCACTGCTTCTCAAGGTTCTCAGACTTCACAACAAAGCTATGTAACGTGTCTCTGTGAGAAACCCGTTCAAC
CTGCATCACATGCAAAAGAGAAAATATTAAATTTCTAACTGCCTACTAGAACAGGCGAGGGAAAAAAGCATTGGTTTAAT
ACAGCTTCATCATAACAAGTGAATCTTCACTATTAAGACAATTTCACATGTCATAACAGTTCTACTTGTGAAAGTGGTCA
AGCAGCATGACATTATTTTGAATAAGTCGATGCTGATAAATCTCAGGAGAGCAAATGATAAAGAACGCCCTGAAGAGAAG
TTGGCTAAATTTGGTGAAAAGAAAGCAATCCGACATCAACTGACCGTTTGATTCATGTCCACGCTATCAGAAAAACTAAG
CATGGTAGAAGTTTATAAATGACAGATAAACAGTTTTGGCACGTGCG-------TTATGCCAAAAATATTATTACCATCT
GCTCAATAATTGGCCCAGCATCAAGTTCTGGAGTAACAAAATGGCTAGTTGCACCAATCAACTTCACCCCAGCATTGAAG
GCCTGAAATAAGTTACATAACTTGCAAATTT----AAAAAGAACAGAAAAAAACAGATTAGGTTCACAATGTAACAAATT
TCAGTACCTGTCTAGAAGGACTTCCTCCTTTGAACGAGGGAAG--
>chr4D_961
ACACTCAGCTGCTGC-----------------------------------------------------------------
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--------------------------------------------------------------------------CTGCTG
CTTGCTTGCTCTTGGCCATGCCCATGGAGATGGAGAGAGTTTGCAAGAGACGGCCGGGCATGCCTCCTGCTCTCCTTCTC
GCCCTTCATGGCGTGGATGAGCAGCATATGCCCGCACCATCG------------GTGCCTCCGCCGCAGACCCCCATGGA
GCCCATGGAGTACCTGTCCAGGTCCTGGAGCGTCTCCGCCGACGAGATATCCAAGGCCCTGCTGCTCAAAGGGGCCACCA
AGCGGAGCTTCTTCGCCCCCGCCGACAGCCTTCTTCC---------GGCCACCATACTGGACACAGAGA---CCTCCTCC
TACGAGCTCCTCGCCGC---------TTCCGGTCAACAGCTCCAGCGCCAGCAACATGTAAGTAACCAATCAATCCACGC
CGTCTCTTGCTTCTTTCCTTCTTTTTCTG-----------------CTCTGCAAC---ATATGCGTATGTGTCAATCAAG
TTGGAAACAACAAATTCAGATGCAAAACAGTTT----------GTAACCATTTCTGATCTAAATGCTCTTACTTACCCAA
AGCATCTCTGCTCTGTAGCTAGATCATGTAACAGGGAGGAGCTCCATCAGCTGCCACCGCCACTCAAACTCGGTGACCAG
ATGGTACTTCCAGCACAAGGAGACCGCCAGGCACGGCAGGAAGGAGAAGGCGCGCGCTGACCGGGCCCAGGCGCACGCCA
TGGTCTCCGTGGCCCAGGTGTCCGCCGCGGTGGCAGCCGTCACTGCGGCGACCAGCCGGGACAACCAGGACTCCAAGATA
GCTGCAGCCATGGCGTCTGCCACCAAGTTGCTGGCTTCGCACTGTGCTGAGGCAGCCCAGCTTGCAGGGGCAGGTCATGA
GCAGGTGTCCTCTGCTGTCCGGTCTGCGGTCGGTGTCGCGGGCCCGGGTGATCTGATGACGCTCACAGCGGCCGCGGCGA
CAGGTGAGAAATCCCCATAAATTGTCATCACACTGAAATTCATCTGCTGTT-----------------A-----------
------TTGTGTGCCTCCTGATGATATTGTGTGCAAAGCTTTGAGAGGAGCTGCGACGCTGAAGAAGAGGGTCCAGCGCG
AGGCGAGAAGCAATGCCACTGTCATTCCTTATGAGAAGGCCCCTTTGTCCTCGAGTCCTGATATCTGGTGCAAGGAAGGC
AAGCTGCTAAAACGCACAAGAAAAGGTGAGAAATACTAAACCATCGGGAAAATTTTAATTACATTCTGATAG-AATAAAA
TCTGAACTTCTGAAGAATGATCAAGAGACCTGACATTCAAATATTTTGTTTCTGAATCAGGGGATTTACACAAGAGACGG
GTGTCAATCTACATTAACAAGAGGTCACAGGTAGGG-AATTTTCCTCCATTGCTTCATTTGTAATATAACACAAAAGGTT
TACAGTTATATAACTCTGGCCAGTTCTGGTGAATAGATGTACATTATGTACAACCGA---ATATCAATTAACAGTAAGTC
TGGATAAATACAGGTCATACTGAAGCTGAAGAGCAAACACATTGGAGGTGCGCTTTCAAAAAACAACAAAAGTAGGTTTA
AATTT----TATCTCAAGAAGTAACACCTGATGGCAATGCTTCCTGAATCTGAATACTGACCTTTTGCTTAAAAATACTT
ACAGGTGTCGTTTACGGGGTATACAGTGAGCTCCCAGAGTGGACTGAGCCAGGGAAATGTTTACCAGAGACATGCTGCTT
TGGCTTGAGTACAGCACAGGGCCTGATTGAGTTCAAGTGTGAGAGCAGCACCAGTAAACAGAGCTGGGTTCATGGCGTGC
AAAATCTGCTCCAGCAGGTCGATGTAGCTGAACAAGTAGGGCACAGGCTAGAAACACTAAAACTCAACTGGTGCAGTTAG
GGTTAGTACATGAACCCAAATTTGCAGGACA-------------------------------------------------
----------GTCAAAGCATGTTTTGGGCAGGTGGTATGTAACAGTAACACTGCTTGATTATTCTCATAAGTTCAACCCA
GGTTAAGATACACCTAATGGCTCGACGTGAATATATTAACAAAA------------------------------------
-------------------------------------------------------------------------GAATAAT
GTATTGCTAGTTTTGGAAAAAGAATACACATTGTAAGAATTCATAAT-AAAAAAAAGGTTCAAAACACAACAGTCTTCAT
CACTTCATATGGCAGCACACGGAGCTCGCAGTATGACTTGATAGCTTCTGCTAGGCACTGCTTCTCAAGGTTCTCAGACT
TCACAACAAAGCTATGTAATGTGTCCCTGTGAGAAACCCGTTCAACCTGCATCAGATGCAAAGGAGAAGATATTAAATTT
CTAATTCCCAGCTGGAATAAGTGGGATAAAAATGCATTGGTTTAATAAAACTTCAGCACAGCATGTGCATCTTCACTAAG
CAGGCAATGCCACTATGCCACAGCAGTTGTAATGTGAAAGTGACCAAGCATGACATTATTTTGGACACAGGTGGATGCTA
ACAAATCCCACAAGGGG------------AACGACCTGAAGAGATACTAGCCCAAG-TGGTGAAAAGAAAGCAATTTAAC
ACCCAACTGATGATTTGATTCAAGTCCAAACTATCATAAAAACTGAGACCAGG---------------------------
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------AGGAGTTTGTAAATGACAGATAGACAGTTGTGGCACTTAAGTTCAATATTATGCGAAAAATATTAGTACCATCT
GCTCAATTATTGGCCCAGCATCAAGTTCGGGAGTAACAAAATGGCTAGTTGCACCAATCAACTTCACCCCAGCATTGAAG
GCCTGAAAGAAGTTAGACAATTGTAAATAAATTGAAAAAAGAAAAGAAAGTT-CAGATCAGGTTCACAAATGTAACAATT
TCAATACCTGTCTAGAAGGACTTCCTCCTTTGAACGAGGGGAGAA
>SNPs
-----------------S--------S----S-S-S--------------S------S----------------------
---------------S--S--------S-------S---S------------S---S-----------------------
------SS---------SSS----S------S-----------S-------------SS---------S----S------
S-------SS--S-------------S------SSSSS----S---------S---------------------S--S--
S------S-------SSS-SS-------------------------------S----------S-----S----------
------S---------------------------------S-------S----S--------------S------S----
------------------S---------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S--------------SS
SS-------S--------------------S---------------------S-SSSSSS--------------------
--S------S--SSS------------------------------S--SSSSSSS------------S-----------S
SSSS-S-SSSSSSSSSSSSS---------------------------SS-S-SS-SSSSSS---S-----S-----S---
----------------------------S----------S--------------------S----------------S--
----------------------S--------S-SS-SSSSSSSSSSSSSS-----------------S-----------S
-----------S-------SSSSSSS-------------SS---------------------------SSSSSS------
----------------------------------------------S-----SS--------------------------
--------------S--S------SS----------------------------S----S-----S--------------
---------------------------------------------S----------------------------S-----
--------------------------S----------S---S--------S----S-----S---SS--SSS--------
--------------------S--S------S----S--S-SSSSS-S---S------------S--------S-SS----
--------S-------S--S-----S--SSSSSSSSSSSSSSSSSS-----------------------S---SS-----
-----S-S--------S----------------------------------SS-----S---S-------S---------
-------------------------------S-------S----------------------------------------
S---------------------S---------------------------------------------------------
-------------------------------------S-----S--S---------SSS---------------------
------------------------S----------S-----------S--------------------------S-----
---------------------------------------S-----S----------------------------------
----------------------------------S----------------------------------SSSSSSSSSSS
SSSSSS---------S----------------------------------------------------------------
-SS----------------------------S-------------S---S------------------------------
---------------------------S---------S-------------------------------------S----
------------------S-------------------------------------------------------------
------------------------------------------S------S----SS------------S-SSS-SSSS--
-----------------------------------S----S----SSSS--S--------------S------------S
S-----------------------------------------S-------------------------------------
----------------S--------------------------S---S-------------S--------S---------
--------------------------------------------------------------------------------
--------------------------------------------------S-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------S-----------SS----S-----SS--------SS
----SS--SS----------------S------------------------------------------------S----
--------------------------------------------------------------------------------
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-------------------------------S----S---------SS--------------------------------
--------------------------------------------------------------------------------
-S--------------------------------------------------------------------S--S---S--
--------------------------S-----------------------S-----------------------------
------------S---S---------------------------------------------------------------
--------------------------------------------S---------------------S-------------
S--------S---------------------------S-------------S----------------------------
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--------------------------------S--SS------------S--S---------------------------
-------S-----------------------------------------S------------------------------
--------------------------S---------S---S---------------------------------S-----
---------------------------------------------
>forward_840
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--------------------GGGGTAGAGGAGGGAGACAG----------------------------------------
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>reverse_1915
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--------------------------------------------------------------------------CCATGA
GCAGGTGTCCTCTG------------------------------------------------------------------
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>forward_1515
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-------------------------------------------------------CTGCAACATGTATGCGTCCG-----
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>reverse_3017
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--------------------------------------------------------GCGTGCTTTGCAACATCAGT----
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---------------------------------------------
