>input_sequence_43245
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------------------------ATGCCCTCCACTCACGCGGAAGATTCTACCGCGCCCACCACCTCACTCTCGCTCGC
CGCTGCG---TCTTCTTCTTCTCGCAGGCTTTTCGCTTCTTCTTCG---TCCGTCCGTGCAGACAGGTGTTCTAGAACGG
CCG-TTCCGGAGCCGGCCACTGAACAAAGGTACCGTACTAATAACTGACGGCTGTACTGTTACATGATCGAGTTCTTGTT
TTG-ATCTTCTCTTCTGCTTTGCAATCGTCTGAACTCAGAACCCATACGCCTCTGTTTTTTGTTTTGTGTCAGGTAACCG
GAGGTTCTTGCAATCTTGCATTGATCTGACAGAATTTATTACGGAACTCAACCCTGTCGAAATCCGCGATCTTCATTTT-
--TTTGGAATTCGTGCATGTTTGTTTGACTTCCTGTCTCAAC-------CAGGCTGAGGAGAGAAGGTTCGCGGTCGGAG
GCCGCCATGTCTCGCCTTGCGCGGCGGAATCCTCCGACTCCGACGGAGCCGACGGCGAGGAAGGTGAGGAGGACCCCGTC
CAGCCTGCTGCTGCGCATCTCCGACATCTGCAAGGTGCATTCTGTCGGCGTCGCGCCGACCGTCGGTGAAAAGCTCAAGA
ACAACAGCACCGCCACCGCCACTGCCGAGAGCAGCGAAGACGGCGCGCACCTCAAAGTCCATCCCCACCAGGCGTCGTCC
TCCGACAACAACGACGAGTGCCTCTCCCAGAGCTCCTCCGCCTACTGCGAGGAGGAGGTCGTCGAGAAGCTCCTCGACGC
GATCTCTTGCCTGAAGGTGGCCTATGTCAACCTTCAGAAGGCCCATGTGCCGTATGATCCTGAAGAGATCGTGATCGCCG
GCGAGCGTTTTGCGTCGGAGCTTGAAGAGACTGCCAACTTGCAGGATTTGTATCTGAATATGAACGAATGGAGCGACCCG
AGGTATCTGTCTCATATAAGCTCTAGAATTCAGGAGTATCAGGACTTAGTGATGGACCTGCAGGCTGACATCTGCAAGAA
AGACTCTGAAATCGGTTGGCTTCGACCAGAGTTGGACGAGCTGGAAAGGAAGAACATGGAACTGGAGGAGAAGATTGTCC
GTAACGGATCGTCCAGAGAAGGATGCTTCACAGTCAGGAAGGGGGTGTCAACTGAAGCGTTCATGGATCTACATGAGCGT
TCGTCAAAGTGCATCCATGATTTTGCAAAATTCATCTTTGATTGGACAAAAGTTTCCGGATGGAACCTCGGCCTATCCAC
ATTTGCAATCGACAGTCAAGTTGCATGTGAGAGAAGGGCTGACAAGAAGTATGCTGTTGAGGCCTATTTTGCTTGTGTGA
TGCTTATGGCAGACAGAGATGACCATACATCCCTGGATTCAGTTGACTGTATCATGAGCTTCAAAGATCCATTTGACGCT
CTCATGACTGATCCAGATTCCAGTTTCGGGAGATATTGCAGAGCAAAGTATCTAGTGGCTGTGCCCCAGAGCATGGAGGA
TTCCTTCTTCGGGAACTTGGATCACAGAGCATTTGTAGAGAGCGGCGGTCATCCAAGGACGCCATTTTACCAGAAATTTG
TGAGGATGGCAAGATATACATGGGCACTACTCGCAGTTGCTCGTTCTCTGAATCCCAGAGCTGAAATGTTTTATGTCAAG
AGTGGTGTTCAGTTTCGGAAGGAACACATGGAAAGTACTCCAGCCAAGATTATCAG---AGAAGAGAAGTTCAATGTTGG
GTTTACAGTCATGCCGGGGTTTAAGATCGGGTGCACCGTCATCAAATGCAGGGTTTACTTGAGTAAGCTTAATGCCATGG
ACTTCTGA------------------------------------------------------------------------
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>chr3B_1_TraesCS3B01G377400
AACGACGACAACGCGCCCGAAGCCACCAAGGCCTACGTCGAGGACAACCGTCGATACCCCAAGGGGAAGCGTCCATCGAG
GAAGTGATGAAATTCCGACGC--------CTTAGTATTAATAGTATCTAAGTAGTTAAGTGATGAACTCTGGCGGCAAGA
CCTTTTGGATATGTTTTTTTTGAAGTTTTTATCTTATAATCTATGTCGTCTCGGACTGTGTTATGTTTATATCTATGCCG
GTTAGCTATGTTCGTATTTAATCTGCGTAGGAACGTCGTTTGCATGGTTTATATGAATTTAAGGTACGACATTTGAGGAA
TGCAGGCATGGAGTGCGAGAAATGAGGTCTGTCCGATCACCTCCAGCGGATGCGCCATGACGCGTCCGCTGGAGTATAGG
AGCCCAAATTAGATGACCGCGGCTGTAAATGCTCTTATATGAATATATATGCAACATCAATGTTTGGCATTTATTTTTCA
TATATATGGCTGCGTCCTGTGGTGGT---ATCATTCACCTTTTAAGAGAAGCAAATATAAACTTTGATTTTATATAGGGT
GTCATTAATGAGTGAAGACCGGAGACAGTATGCACAAACATTG---TACCTCTCCCAAAATGAGATTTCACCAACCAACC
AAAAAATCTTTAG-TTTACTGCCACGTGA----CG--CCCGCTCTGAATATCCCCCTTCCATCCCCGGGGTAAGATCTGG
AATGGAAGGCCGGAAGTCAGATCTGCAGTTA-------------------------------------------------
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-----------------------------------------------------------------------------CAG
AATCTAAATCTCTAAATTAATGACACGAGCAGTTACAGTCTTAGTCTTAAGTCTTAGGCAGAGAGCGAGGTTAGGGTTT-
----CCCAAGCCCCCGCTTCCTTCGGTCGGCCGCACCCTCTCCTCAAACCCCTGGCCTCTGGGGATTACAAAAGAAATCC
AACCCCGAGTAGCAGTAGCAGTAGTGGTTCCCACCCCCTTCCCTCC----TCGTCT------------------------
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--------------------------------------------CGATCCGCCCCTTTTTCCTGTTCGAATCCATTGGAG
CCCACGAGGTCTCCCATAACCTCCATGCCCTCCACTCACGCGGAAGATTCTACCGCGCCCACCACCTCACTCTCGCTCGC
CGCTGCG---TCTTCTTCTTCTCGCAGGCTTTTCGCTTCTTCTTCG---TCCGTCCGTGCAGACAGGTGTTCTAGAACGG
CCG-TTCCGGAGCCGGCCACTGAACAAAGGTACCGTACTAATAACTGACGGCTGTACTGTTACATGATCGAGTTCTTGTT
TTG-ATCTTCTCTTCTGCTTTGCAATCGTCTGAACTCAGAACCCATACGCCTCTGTTTTTTGTTTTGTGTCAGGTAACCG
GAGGTTCTTGCAATCTTGCATTGATCTGACAGAATTTATTACGGAACTCAACCCTGTCGAAATCCGCGATCTTCATTTT-
--TTTGGAATTCGTGCATGTTTGTTTGACTTCCTGTCTCAAC-------CAGGCTGAGGAGAGAAGGTTCGCGGTCGGAG
GCCGCCATGTCTCGCCTTGCGCGGCGGAATCCTCCGACTCCGACGGAGCCGACGGCGAGGAAGGTGAGGAGGACCCCGTC
CAGCCTGCTGCTGCGCATCTCCGACATCTGCAAGGTGCATTCTGTCGGCGTCGCGCCGACCGTCGGTGAAAAGCTCAAGA
ACAACAGCACCGCCACCGCCACTGCCGAGAGCAGCGAAGACGGCGCGCACCTCAAAGTCCATCCCCACCAGGCGTCGTCC
TCCGACAACAACGACGAGTGCCTCTCCCAGAGCTCCTCCGCCTACTGCGAGGAGGAGGTCGTCGAGAAGCTCCTCGACGC
GATCTCTTGCCTGAAGGTGGCCTATGTCAACCTTCAGAAGGCCCATGTGCCGTATGATCCTGAAGAGATCGTGATCGCCG
GCGAGCGTTTTGCGTCGGAGCTTGAAGAGACTGCCAACTTGCAGGATTTGTATCTGAATATGAACGAATGGAGCGACCCG
AGGTATCTGTCTCATATAAGCTCTAGAATTCAGGAGTATCAGGACTTAGTGATGGACCTGCAGGCTGACATCTGCAAGAA
AGACTCTGAAATCGGTTGGCTTCGACCAGAGTTGGACGAGCTGGAAAGGAAGAACATGGAACTGGAGGAGAAGATTGTCC
GTAACGGATCGTCCAGAGAAGGATGCTTCACAGTCAGGAAGGGGGTGTCAACTGAAGCGTTCATGGATCTACATGAGCGT
TCGTCAAAGTGCATCCATGATTTTGCAAAATTCATCTTTGATTGGACAAAAGTTTCCGGATGGAACCTCGGCCTATCCAC
ATTTGCAATCGACAGTCAAGTTGCATGTGAGAGAAGGGCTGACAAGAAGTATGCTGTTGAGGCCTATTTTGCTTGTGTGA
TGCTTATGGCAGACAGAGATGACCATACATCCCTGGATTCAGTTGACTGTATCATGAGCTTCAAAGATCCATTTGACGCT
CTCATGACTGATCCAGATTCCAGTTTCGGGAGATATTGCAGAGCAAAGTATCTAGTGGCTGTGCCCCAGAGCATGGAGGA
TTCCTTCTTCGGGAACTTGGATCACAGAGCATTTGTAGAGAGCGGCGGTCATCCAAGGACGCCATTTTACCAGAAATTTG
TGAGGATGGCAAGATATACATGGGCACTACTCGCAGTTGCTCGTTCTCTGAATCCCAGAGCTGAAATGTTTTATGTCAAG
AGTGGTGTTCAGTTTCGGAAGGAACACATGGAAAGTACTCCAGCCAAGATTATCAG---AGAAGAGAAGTTCAATGTTGG
GTTTACAGTCATGCCGGGGTTTAAGATCGGGTGCACCGTCATCAAATGCAGGGTTTACTTGAGTAAGCTTAATGCCATGG
ACTTCTGAACACATCATATGACAACCATTAGGTAAGCAAGCAATTAGCT---TATAGTAAGTCTGTCGGACAAAGTTTCT
GTTAAGCTTCTCCTGTATTCAGCCTAGGAGTTGAGGAGCACTACCTAGTAGATAATACCTCATAATGTTAACTTGTAGTA
GAATATTGTGCTAGTATTATGTATAGTTTTCAGTGGTTCATCTATTTCTCCATAAATCAGGCCTCTGTTCATGTGCTACT
TGATATACCAACGAAATTGGATAATGGAATGTGGGC--ATGCTCATCAAAAACCATTTTGCATGAACAACACAAGCACAC
ATCACATCACTGTCCTAATCCCTTGATGTTATAGCATCCATC-ATTTATCTAACCATGAGCCGAACAACGGGTTTGTTGG
TACAAAAGAAGTTCATCTGCTGAAGAGCTTGGAAAAGAAGTTTGTTGGTTTCGAGTTCTCTGCGCACGCCACATGCATAT
ATCTTCCGAGATTGTCAACTTGCCTTGGCTCCCCTCTTGTGTCTTTCTTGCAAACTTTGCAGGTCTTGTCCACCCAACCT
TCCTCCACGTATTCTCCGTCAACTGTATTTTCAGAAACAAATTATTTGGTCAGCATTCAGTAACATGATTTATTGTATGT
TGTTTGCTCAGAGGAAGGTCGGGTAGAAAAAA--TCGTGTGAGACAAAATATTCTTATACAATGTGAGGTCATATTAATC
CCAACAGTTTATGCTGC-----AGTAGTATACAAATATTGTACTGCCTGAGAAATCAA---TAGATAAAACATGAGGTCA
TCTCTGTATCTGTGAGGGTATAGG----CAGGGTACCTTCAACATATGACTTGAAGAAATCCTTGTAGGTGCCACCAATC
TTCCTCCGAAGGGCTGCATACTGAATTTGAAATACCAACCAGAAATTCATCAGCATAAGAAAAACTTGCAGATTTCGCTG
-AACATTTGTTCAAAATTGTTTTTT-CCATTGGCGGTTCAGTGTATGTATGCATACCTGCTCCCTTGTCA
>chr3D_1
AACAACAACGACGCGCCCGGAGCCACCGATGCCTACATCGAGGACAACTGCCGAGACCCCAATGGGAAGCGTCCGACGAG
GAAGTGATGAAATTCCGACGCCTCAATCTCTTATTATTAATAGTATCTAAGTAGTTAAGTGATTAACTCCGGTAGCATGA
CCTTTTAGATCAGAC-TTTTTTAAGTTTTTATCTTATAAT----------------------------------------
--------------------------------------------------CTATGTATTTGAGGTAGGGCATTTGAGGAA
TGCAGATGTGGAGTGCGAGAAATAAGGTATGTCCGGTCTCCTTCAGTGGACGCGCCATGATGCCTTCACGGGAGTATAGG
AGCCCAAATTAGGTGGCCATGACTGTAAATGCTCTTATATGAATATAT--GCAACATCAATGTTTGGCATTTATTTTTCA
TATATATGGTTGTGTCCTGTGGTGGT---ATCATTCTCCTTTCAAGAGAAGCAAATATAAACTTTGATTTTATATAGGGT
GTCATTAACGAGTGAGGACTGGAGACAGTATGCA--AACATTG---TACCTCTACCAAAATGAGATTTCACCAACCAACC
GAAGAAACCTTTG-TTTATTGCAACGTGA----CACCCCCACTCTGAGTATCCCCCTTCCATCCCCGTGGTAAGATCTGG
AATGGAAGGCCGGAAGTCAGATATGTGGTTACAGAATCTAAATATCTAAATTAATGATGTGAGCAGTTACAGTCTTAGTC
TTGTGCAGAGAGCGAGGTTAGGGTTTCTAGACTATGATTCTTCATAATCGAGTCAAAAGAACTAGCCCTGAACTTGTTCT
GATGGCCTACTTGTTGTGATCGGCTCCCAATTTCACTTGATACTTGCTTAGTTGCTGATTAATTTTCTTATTAGTTATAT
AATTCTTCTCCATTTTTCAGACCTTGTCTAATTGAATGACGACAATTGAAACAAAGTGAAAAGTGTACTATTATTGTGTG
TAGAATCCTCACAAGAAAAAAACAAACAAAAACTTGGCCAAATGGACAATTCCATATTTTCATGTGCCACTTAACGAGCA
AACCGATCATAGTGTCATATGGAGCATACAAGTTAAATTTAATATGAAATAAGGTATGCATCATCTTTAGGCCAGCAAGG
GCATCACTCTATCTTTCGGTGCTTAATAGGGAATTCTCTCAATGTTGAAGATGTTGCCGCTTCAACATAAATGTTTGGCA
TTTATTTCTAATATATACTTTATGGTTGTGTGCCATCAATTGAAGCACACACCAATATCATTCTTCTTTCAAGAAAAACA
ATATAACTTCCGTTTTTATATGGGTTGTCATTAATGAGTGAAGACTGGACACTGCATGCAAACATTGTACCTCTCCTAAA
GTCATATTTCACCACCAACCAAAAAAATTTGTTTGTCGCAACGTGACACCCTCTATGAATATTCCCTTTCTATGACCTCC
GGCTCTCGCGTCGCCCCTCTCGGGCGACGCGGGAGCAACCCCAAACCCTATCCTCCACCACCTCTCCCCCTCCTGCCCCC
TCTCTGCCGCCACCCAAGGAGCCTGCTGGCAGCTGTGCGTCTTTCGGTGAAGGTGGCAGCAAGGATCTGCTGCCTCGCAC
CGGTGTGAGGGGCTTTGGAAGGCAGGCGGCAGCCTTGGGTGGAGATGGTGGTGTCAATCTCTTCGATGGATGGCGTGCAT
GGGTCCTGGCTGTCCCATTCGGTCACGTGGGCGGCATGAAGGGGGCGAGGTCTTGCTGCAGCGGCGAGTGGCTCTTCTTC
CCGCTGGCCCTTTCCCCTCGCGGTGGTCTCCTCTCATCGATCTGGTGGTTGGCCCATCAGATCTGATCGTCGTGGATGGG
GTGGTGGAGCCTTGGAACGTGGAAACCCCTGGTCGATTTTGCGTCCACCTCGACGTCGGCGGTGCTCTGGTGCCATTCTC
CCTTTTGAGGGCGGGTCAAGGTTCCAGGTCCATCCCCTCCTCCCCCTTCCTTCTCCGGACGAAAGTCTTGACCTTTTGGC
CAAGCGGCAAAGGCGTTCTGGCATCTCGGTCCTCCCTAGAGGCGCCATTCAAAGGGTGGTAAGGGGTTGTAGTCCTGTTG
CGTGGTCATTGGTGGTGGCGGCGACACTTGGCTCCCCTGGTTGCCGACATTGATGGTGCTGTGAGGGTCCTTCCGCATAT
TTCAGTGGCTCGTCGCCTTCTTTTCTGGTTGGTCGCTGGACGGTGGTGGTCGTCCGCTTGTTTGGCACGACCTGGACGAA
GGGGAGATAGTGGTCTCCCCTTTGGCAGTGGCCCAAGGCGGCGGGCGACGGAGTCGACGTCTTGCTTCAAGTGGTCTCGT
CTTCATGTCCACGACAATTTCTGTCGTCGGGTGCCTTCGGTCCTGCCGTTCTGGCTGCGCAAGATCTCTGACAGCCTGAT
CACAGCTTCTCTTGGTGCTTTGTTCGCTGTTGCTTCTGTTTGTAGTGACATGTGCGTGTATTATTTCAGTTTTTGATCAA
GTCTTTGCCTTTGTATTTTAGCACCATTGTATCCTAGCCAGTTGATGGCTTCATTAATTCGAATTCGAGCCCTTGTGCCT
TTTCTCTCACAAAATATATTCCACTTCTATCCCTATGTAAGATCTGGAATGGAAGGCCACAAGTTAGATCTATAGCTGCA
TAATCTAAGTCTAAATTAATGGCATGAGAAGTTACGCTCGTTAGAGGGACAAGCGGAGAGAAAGGGTAGGGTTTCCCAAG
TCCCCCGCTTCCTTCGTTGACCGCACCATGTAATTGAATCCTTAGTATCTGGGGATTACAAAACAAATCCACCCCAAGTA
GTGGTTCCCATTCCCCTCCCTCCTCATCTCGATAGGCGACACAATCCCTCATAGCGACAGTAATGGTGTCGGGGCTCCTC
ACGGCGATGGGCAATGAATGTGCTTAGGGGAGACCCAATGGTCATAGCCATTCATGGCTCGGCCTCGCACATAGGCGTGG
AGTTGGGCATGGCTCTTAGCTATGGGGAGGTGGGCAGGGTTCGGAGGAGGCGTAAATGCTCGCGCAGTTGAGGCAACTAT
GCAAAAGCAGTTGTTGGGTCGACGACATGTTATGCTCGAACTGCAACAACACCTGCCTACATCGGGCATGCACAATACAA
TGGAATAACTTTAAAGTCTGTGAAGTCCTCTATAGCAAGATACCCTAAGTAAGAGGACGAAAACCATAGGGGACAATGTT
CCCCTAGAGTATGCCCTACCTAAGTCCTAAACATGGGTACTCATGGTTTTATTAGATTTTTTTCTTCTGAAACTCTAGGG
AAAGTTTGTTTCCCCTTGGTCTTGAGATCTAGATACACATGGCAATGGTGATGACATTTAAAGCGAAAAGACTAGGTAAG
ACATGAGGGTGTTCGGTCCACCCAAAGTCAACACTAATCGCCACCTTTTGGGGGGGGGGGCCTAATTAATCCACCTAATC
CTCTGAAGGAGTTGATAGTCACTTTCCAAACTGAAGCTGTCGGAAAGCGAGCGCTCCAACGCGCACGCATGAGATAGGGA
CTCTCTTAATGTAAATTTGCTTTCTATGTAGGATTTTTGAAGATGCCGCCATTACGCAAGTCTTACAACATCTATAGCCG
GGCACCCCAAACCATTCCTATAATCCCGGGTGGGTGTCCCGTTCACCAACCGCCCGAATCTGGGTTGGATATGGGGAGGA
CTGGGCGCGCCCGGGTGTGTCTGCCACGTCAGCCCGACCCCACTATGGCCCGCACCGACCCTACTCCTACCCCACAATTA
GCTGATGTCTGAATAACAAACCCTAGTCAAACTCAATCACTCGACCTCTGTGCTCATCCTTCGTCGCATCGACTTACTCT
CTCCCCCCAGATCGATCCCAATCCACGATGGCCCACATCGACTCCGATGGCATGGACTAGGCGAAGCTCGCCGCGGAGTC
CCCGATGAGGAGGAGCTGGCGCTCCCCATTGCCCTCACTGGTTGCGGCTGGACTGGGGCGCCAACTCCTATTCCGGGGCG
TCAGTGGACCCCAGGTGGGCAACTGCAGCTCCGCGACGCCCCACGGCCACTGGAGGTGGTCCCTGCCAGGCGGCAGTTGG
CACCGCCCACAACTGCTCCTTTGGGGCATCGCTGGGTGCTCGTGCCCAAGTCGACGGGGCGCGTATACAGCGCGCAAGGA
TGTGGGCGACGGAGGAGGCTGCCAGCCACTCCTACTGCGGATCGAGAAGATCCCCGTCGGAGTCACCCTCCCCACCTCTG
ATGACAACGAGGCCCTCCGCAGTGCCATCCGCCACTCCTACATATCCGCGGAGACGGACGCCCGCCGTCTTCGTCGCAAA
AATGTGGCGGTGCTCCGCAAGTCTCTCGAGGAATCTGAGTGCTTGGCGATGCAGCGGGTGACGATGGTGGAGAGAGCCAC
ATGGCTACTTGAGGAGCAGAACCCTGCCGCCCAACACTTGGCGGGGATCGTCATCTCGTCGTCGTCGTCCTCCTCCGCTT
CGGACAACGACGACGACGCGCCCGGAGCCACCGAGGCCTAGGCTGAGGACAGCCGCCGATACCCCAAGGGGAAGCGTCCA
TCGAGGAAGTGATGAAATTCCGACGCCTCAATCTCTTAGTATTAATAGTATCTAAGTAGTTAGGTGATGAACTCCGGCGG
CAGGACCTTTTGGATATGATTTTTTTAATTTTTTATCTTATAATATATGTCGTATCAGACTGTGTTATGTTTATATCTAT
GCCGGATAGCTATGTTCGTATTTGATCTACGTAGGAACGTCGTTTGCATGGTTTATATGGATTTGAGGTAGGACATTTGA
GGAATGCAAATATGGAGTGCGAGAAATAAGGTCTGTTTCATGTGAGGGCTCCCCCCCCCCTCCCCCGGTGATTCTAAAAA
TAAAAAGAAATAAGATCTGCTCGGTCACCTCCAGCAAACGTGCCATGACGCGTCCGCGGACTATAGGAGCCCAAATTAGT
TGCACGGCTGTAAATGCTCTTATATGAATATATGCAACATCAATGTTTGCCATTTATTTTTCATATATATATGGTTGTGT
CCTGTGGTGGTTGTATGATTCTCCTTCCAAGAGAAGCAAATATAAAAACTTTGATTTTATATGGGGTGTCATTAATGAGT
AAGGACTGGACACAGCATGCAAACATTGTACCTCTCCCAAAACGAGATTTCACCAACCAACCGAAAAACCTTTTGTTTAA
TAGCAACGTGACACCCCCACTCTGAATATCCCCCTTCCATCCCCGTGGTAAGATCTGGAATGGAAGGCCGGAAGTCACAG
TGTCTAAATCTCTAAAGTAATGACACGAGCAGTTACAGTCTTAGTCT-------TAAGCAGAGAGCGAGGTTAGGGTTT-
----CCCAAGCCCCCGCTTCCTTCGGTCGGCCGCACCCTCTCCTCAAACCCCTGGCCTCTGGGGANNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGATCCGCCCCTTTTTCCTGTTCGAATCCATTGGAG
CCCACGAGGTCTCCCATAACCTCCATGCCCTCCACTCACGCGGAAGATTCTGCCGCCCCCTCCACCTCACTCTCGCTCGC
TGCTGCG---TCTTCTTCTTCCTGCAGCCTTTTCACTTCTTCTTCT---GCCGTCCGTGCAAGAACGTCCGCCGTTCGTG
GAGCTTCCGGAGCCGGCCACTGAACAAAGGTGCGGTACTAATAACCATGGACTGTGCTGTTACATGATCGAGTTCTTGTT
TTG-ATATTCTCCTCTGCTTTGCAATCGTCTGAACTCAGAACCCATACGCCCCTGTTTTTTGTTTTGTGTCAGGTAACGG
GAGGTTCTTGCAATCTTGCATTGATCTGACAGAATTTATTACGGAACTCAATCCTGTCGAAATCCGCGATCTTCTTTTTC
TTTTTGGAATTCGTGCATGTTTGTTTGACTTCCTGTCTCAACCAGGCTCA----TGAGGAGAGAAGGTTCGCGGTCGGAG
TCCGCCATGTCTCGCCTTGCGCGGCGGAATCCTCCGACTCCGACGGAGCCGACGGCGAGGAAGGTGAAGAGGACTCCGTC
CAGCCTGCTGCTGCGCATCTCCGACATCTGCAAGGTGCATTCCGTCGGCGTCGCGCCGACCGTCGGTGAGAAGCTCAAGA
CCAACGGCACCGCCACCGGCACCGCCGAGAGCAGCGAAGACGGCGCGCACCTCAAAGTCCATCCGCACCAGGCGTCGTCC
TCCGACAACAACGACGAGTGCCTCTCCCAGAGCTCCTCCGCCTGCTGCGAGGAAGAGGTCGTCGAGAAGCTCCTCGACGC
GATCTCCTGCCTAAAGGTGGCCTATGTCAATCTTCAGAAAGCTCATGTGCCGTATGATCCTGAAGAGATCGCGATCGCCG
GCGAGCGTTTTGCGTCGGAGCTTGAAGAGACCGCCAACTTGCAGGATTTGTATCTGAATATGAACGAATGGAGCGACCCG
AGGTACCTGTCTCATATAAGCTCTAGAATTCAGGAGTATCAGGACCTGGTGATGGACCTGCAGGCTGACATCTGCAAGAA
AGACTCTGAAATCGGTTGGCTTCGGCCCGAGCTGGACGAGCTGGAAAGGAAGAACATGGAACTGGAGGACAAGATTGGCC
GGAACGGATCGTGCAGAGAAGGATGCTTCACAGTCAGGAAGGGGGTGTCAACTGAAGTTTTCATGGATCTACATGAGCGT
TCGTCGAAGTGCATCCATGATTTTGCAAAGTTCATCTTTGATTGGACGAAAGTTTCCGGGTGGAACCTCGGCCTATCGAC
AACCCCAATCGACAGTCATGTTGCATATGAGAGAAGGGCCGACAAGAAGTATGCTGTTGAGGCCTATTTTGCTTGCGTGA
TGCTTATGGCAGACAGAGATGACCATACATCCCTGGATTCAGTTGACTGTATCATGAGCTTCAAAGATCCTTTTGATGCT
CTCATGACTGATCCAGATTCTAGTTTCGGAAGATATTGCAGAGCAAAGTATCTAGTGGCTGTGCCCCAGAGCATGGAGGA
TTCCTTCTTTGGAAACTTGGATCACAGAGCATTTGTGGAGAGCGGTGGTCATCCAAGGACGCCATTTTACCAGAAATTTG
TGAGGATGGCAAGATACACATGGGCACTACTCGCAGTTGCTCATTCTCTGAATCCCAAAGCTGAAATGTTTTATGTCAAG
AGTGGCGTCCAGTTTCGGAAGGAACACATGGAAAGTACTCCAGCCAAGATCATCAG---AGAAGAGAAGTTCAGTGTTGG
GTTTACAGTCATGCCGGGGTTTAAGATTGGGTGCACTGTCATCAGATGCAGGGTTTATCTGGGTAAGCTTAACGCAATGG
ACTTCTGAACACATCATATTACAGCCATTAGGTAAGCAGAATCAATTAGATCTATGGTAAGTCTGTCGGCCAAAGTTTCT
GTTAAGCTTCTCCTGTATTCAGCCTAGGAGTTGAGGAGCACTTGCTAGTAGATAATACCCCATAATGTTAACTTGTAGTC
GAATATTGTGCTAGTATTATGTATAGTTATCAGTGGTTCATCTATTTCTCCATAAATCAGGCCTCTGTTCATGTGCTACT
TGATATACCAACGAAATTGGATAATGGAATGTGTATATATGCTCATCAAAAACCATTTCACATGAACAACACAGTA----
--CACATTACTGTCCTAATCCCTTGGTGTTATAGCATCCATCTATTTATCTAACCATGAGTCGAACAACGGGTTTGATGG
TACAAAAGAAGTTCATCTGCCGAAGAGCTTGGAAAAGAAGTTTGTTGGTTTCGAGTTCTCTGCGCACGCCACATGCATAT
ATCTTCCTAGATTGTCAACTTGCCTTGGCTCCCCTCTTGTGTCTTTCTTGCAAACTTTGCAGGTCTTGTCCACCCAACCT
TCCTCCACGTATTCACCGTCAACTGTATTTTCAGAAACAAATTATTTGGTCAGCATTCAGTAACATGATTTATTGCATGT
TGTTTGCTCAGAGGAAGGATGGGTAGAAAAAAAATGGTGTGAGACAAAATATTCTTATACAATATGAGGTCATATTAATC
CTAACAGTTTATTCTGCCTAGCATTAGTATACAAATATTGTACTGCCTGAGAAATCAAGAGTAGACAAAACATGAGGTTA
TCTCTGTATCTGTGACTGAGGGTATGGACAGGGCACCTTCAACATATGACTTGAAGAAATCCTTGTAGGTGCCACCAATC
TTCCTCCGAAGGGCTGCATACTGAATT-GAAATACCAACCAGAAATTCATCAGCATAAGGAAAACTTGCAGATTTCAATA
-AACATTTGTTCAAAACTGTTTTTTTCCATTGGCGGTTCAGTGTATGTATGTATACCTGTTCCCTTGTCA
>chr3B_16
---------------CCCGGAGCCACCGACGCCTACATCGAGGACAACCGTTGAGACCCCAAGGGAAAGCGTCCAATGAG
GAAGTGATGAAATTACGATGCCTCAATCTCTTAGTATTAATAGTATCTAAGTAGTTAAGTGATGAACTCCCGTGGCATGA
CCTTTTAGATCAGACAA-TTTTAAGTTTTTAACTTATAAT----------------------------------------
--------------------------------------------------ATATGTATTCGAGGTAGGGCATTTGAGGAA
TGCAGATGTGGAGTGCGAGAAATAAGGTATGTCCGTTCTCCATTAGTGGACGTGACATGATGCCTCCGCAGGAGTACAGG
AGGCCAAATTAGGTGGCCATGACTGTAAATGCTCTTATATGAATATAT--GCAACATCAATGTTTGGCATTTAGTTTTCA
TATATATGGTTGTGTCCTGTGGTGGT---ATCATTCTCCTTTGAAGAGAAGCAAATATAAACTTTGATTTTATATAGGGT
GTCATTAATGAGTGAGGACTGGAGACAGCATGCA--GACATTG---TAATTCTCCCAAAATGAGATTTCAGCATCCAACC
GAAGAAACCTTTG-TTTATGGCAACGTGA----CACCCCCGCTCTGAATATCCCCCTTGCATCCCCGTGGTAAGATCTGG
AATGGAAGGCCGAAAGTCAGATCTGCGGTTA-------------------------------------------------
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-----------------------------------------------------------------------------CAG
ACTCTAAATCTCTAAATTAATGGTGTGAGCAGTTATAGTCTTAGTCT-------CGAGCAGAGAGCGAGGTTAGGGTTT-
----CC--------------------------------------------------------------------------
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>chr3A_426
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---------------------------------CTTATATGAGTACAT--GCAACATCAATGTTTGGCATTTA-TTTTCA
AATATATGGCTGTGTCCTGTGGTGGTGGTATCATTCTCCTTTCAAGAGAAGCAAATAAAAATTTCGCTTTTATATAGGGT
GCCATTAATGAGTGAGGACTGGAGACAGTATGCA--AACATTGTACTACCTCTCCCAAAATGAGATTTCACCAACCAACC
AAAGAAACTTTTGTTTAATAGCAACGTGACGCCCG--CCCGCTCTGAACATCCCCCTTCCATGCCCGTGGTAAGATCTGG
AATGGAAGGCCGGAGGTCAGATCTGCGGTTA-------------------------------------------------
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-----------------------------------------------------------------------------CAG
AGTCTAAATCTCTAAATTAATGACACGAGCAGTTACAGTCTTGGTCT-------TAAGCAGGGAGCGAGGCTAGGGTTTG
CCAACCCAACCCCCCGCTTCCTTCGGTCGGCCGCA--------TCAAACCCCTGGCCTCTGGGGATTACAAAAGAAATCC
AACCCCTTGTAGGAGTG---GTAGTGGTTCCCACCCCCCTCCCTCCCTCCTCGTCT------------------------
--------------------------------------------------------------------------------
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--------------------------------------------CGATCCGCCCCTTTTTCCTGTTCGAATCCATTGGAG
CCCACGAGGTCTCCCATAACCTCCATGCCCTCCACTCACGCCGAAGATTCTGCCGCCCCCACCACCTCACTCTCGCTCGC
CGCTGCGCCTTCTTCTTCTTCCTGCAGGCTTTTCGCTTCTTCTTCTTCTTCCGTCCGTGCAAGAACGTCCGCCGTTCGTG
GAGCTTCCGGTGCCGGCCGCTGAACAAAGGTACCGTACTAATCACCGACGACCGTGCTGTTACATGATCGAGTTCTTGTT
TTGCATCTTCTCCTCTGCTTTGCAATCGTCTGAGCTCAGAACCCATACGCCCCTGTTTTTTGTTTTGTTTCTTGTAACCG
GAGGTTCTTGCAATCTTGCATTGATCTGGCAGAATTTATTACGGAACTCAATCCTGTCGAAATCCGCGATCTTCATT---
TTTTTGGAATTCGTGCATGTTTGTTTGACTTCCTGTCTCAACTCTCAACCAGCCTGAAGAAAGAAGGTTCGTGGTCGGAA
GCCGCCATGTCTCGCCTTGCGCGGCGGAATCCCCCGACTCCGACGGAGCCGACGGCGAGGAAGGTGAGGAGGACCCCGTC
CAGCCTGCTGCTGCGCATCTCCGACATCTGCAAGGTGCATTCCGTCGGCGTCGCGCCGACCGTCGGTGAGAAGCTCAAGA
CCAACGGCACCGCCACCGCCACCGCCGAGAGCAGCGAAGACGGCGCGCACCTCAAAGTCCACCCGCACCAGGCGTCGTCC
TCCGACAACAACGACGAGTGCCTCTCCCAGAGCTCCTCCGCCTGCTGCGAGGAAGAGGTCGTCGAGAAGCTCCTCGACGC
GATCTCTTGCCTGAAGGTGGCCTATGTCAATCTTCAGAAAGCCCATGTGCCGTATGATCCTGAGGAGATCGCGATCGCCG
GCGAGAGCTTTGCGTCGGAGCTTGAAGAGACCGCCAACTTGCAGGATTTGTATCTGAATATGAACGAATGGAGCAGCCCG
AGGTATCTCTCTCATATAAGCTCCAGGATTCAGGAGTATCAGGACCTGGTGATGGACCTGCAGGCTGACATCTGCAAGAA
AGACTCTGAAATTGGTTGGCTTCGACCCGAGCTGGACGAGCTGGAAAGGAAGAACATGGAACTGGAGGAGAAGATTGGCC
GTAATGGATCGTGCAGAGAAGGATGCTTCACAACCAGGAAGGGGGTGTCAACTGAAGTGTTCATGGATCTACATGAGCGT
TCGTCGAAGTGCATCCATGATTTTGCAAAATTCATCTTTGATTGGACAAAAGTTTCCGGATGGAACCTCGGCCTATCCAC
ATTTGCAATCGACAGTCAAGTTGCATATGAGAGAAGGGCTGACAAGAAGTATGCTGTTGAGGCCTATTTTGCTTGCGTGA
TGCTTATGGCAGACAGAGATGACCATACACCCCTGGATTCAGTTGACTGTATCATGAGCTTCAAAGATCCATTTGACGCT
CTCATGACTGATCCAGATTCTAGTTTCGGGAGATATTGCAGAGCAAAGTATCTAGTGGCTGTGCCCCAGAGCATGGAGGA
TTCCTTCTTTGGAAACTTGGATCACAGAGCATTTGTCGAGGGCGGCAGCCATCCAAGGACGCCATTTTACCAGAAATTTG
TGAGGATGGCAAGGTATACATGGGCACTACTCGCAGTTGCTCGTGCTCTGAATCCAAGAGCTGAAATGTTTTATGTCAAG
ACTGGTGTTCAGTTTCGGAAGGAGCACATGGAAAGTACGCCAGCCAAGGTTATCGGAGAAGAGGAGAAGTTCAGTGTTGG
GTTTACGGTCATGCCGGGGTTTAAGATTGGGTGCACTGTCATCAGATGCATTGTTTATTTGTGTAAGCTTAACGCAATGG
ACTTCTGAACACATCATATTGCAGCCATTAGGTAAGCAGAATCAAATAGCTATATAGTAAGTCTGTCAGCCAAAGTTTCT
GTTAAGCTTCTCCTGTATTCAGCCTAGGAGTTGAGGAGCACTATCTAGTAGATAATACCTCATAATGTTAACTTGTAGTA
GAATATTGTGCTAGTATTATGTATAGTTTTCAGTGGTTCATCTATTTCTCCATAAATCAGGCCTCTGTTCGTGTGCTATT
TGAGATACCAACGAAACTGGATAATGGAATGTGTATAAATGCTCATCAAAAACCATTTCACATGAACAACACAGTA----
--CACATTACTGTCCTAATCCCTTGATGTTATAGCATCCATCTATTTATCTAACCATGAGT--------GGGTCTGATGG
TACAAAAGAAGTTCATCTGCCGAAGAGTTTGGAAAAGAAGTTTGTTGGTTTCGAGTTCTCTGCGCACGCCACATGCATAT
ATCTTCCTAGATTGTCAACTTGCCTTGGCTCCCCTCTTGTGTCTTTCTTGCAAACTTTGCAGGTCTTGTCCACCCAACCT
TCCTCCACGTATTCGCCGTCAACTGTATTTTCAGAAACAAATTATTTGGTCAGCATTCAGTAACATGATTTATTGTATGT
TGTTTGCTCAGAGGAAGGACGGGTAGAAG--AAATCGTGTGAGACAAAATATTCTTATACAACATGAGGTCATATTAATC
CTGGCAGTTTATTATGCCTAGCAGTGGTGTACAAATATTGCACTACCTGAGAAATCAAGAGTAGACAAAACATGAGGTTA
TCTCTGTATCTGTGACTGAGGGTATGGACAGGGTACCTTCAACATATGACTTGAAGAAATCCTTGTAGGTGCCACCAATC
TTCCTCCGAAGGGCTGCATACTGAATT-GAAACACCAACCAGAAGTTCATCAGCATAAGGAAAACTTGCAGGTTTCACTA
TAAAAATTGTTCAAAATTGTT-------------------------------------------------
>SNPs
---S--S--S---------S-------S-S------S-----------------S--------------------S----
---------------------------------------------------------------------S--S----S--
------S---SS-SSS-----S------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S----S-----S-S-----------
-----SSS---------------S----S------S--S---S---S---S---------S--S-----S----------
------------S--S--SS-S--------------------------SS------------------------------
------------S-----------------------S-----S-------------------------------------
---------------S---S--------------SS--------------------------------------------
---S--S----S------S---S--------------------------------------------S------------
--------------------------S-----------------------------------------------------
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-S---------------------------------------------SSSSSSS--S-----------------------
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------SS----S---SSSS------------------S-----------------------------------------
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---------------------------------------------------S----S-----------------------
---------------------SS----------------------S---------------SSS-S--SSS-SSSSSSS-
SS-------------------------------------------S----S----S------------------------
------------S--------------------------------------S----------------------------
---------------------------------------------------S----------------------------
----------------------------------------------------S---------------------------
--------------------------------------------------------------------------------
------------------------------------------S--------------------------S----------
S----S----------------S-----------------------------------------S---------------
-------------------------------------------S---------S--------------------------
------------------------------S--------S-------------------------------S--------
-------------------------------S------------------------------------------------
---------------------------------------------S-S--------------------------------
---------------------------S---S---------------------------------------------S--
------------S--------------------------------------------S----------------------
-----S--------------------------------------------------------------------------
--------------------------S------------------------------------------------S----
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--------------------S-----------------------------------------------------------
---------S--S-----------------------S-------------------------------------------
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-------------------------------------------------------------------------S------
---------------------------S--------S-------S------------S---S----------S--S----
-------------------S---S--------------SSSSSSS-SSS--------------------S----------
-------------------------------------------S------------------------------------
--------------------------------------------------------------------------------
---------------------------------SSS----------------------SS-------------SSSSSSS
SS-----S----------------------------------------------------S---------------S---
--------------------S-----------------------------------------------------------
-------S------------------------------------------------------------------------
--------------S-----------------------------------------------------------------
------------------S--------------------------------------------S----------------
-S----------S----------------------------------------------------S------------S-
---------------SS-SSSSSS--------------------------------------------------------
---------------------------S-------------------------------S----------------S--S
---------------------------------------------------S-------S----------
>forward_5537
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-----------------------------------------------------------------------------TCC
AACCCCGAGTAGCAGTA---------------------------------------------------------------
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>reverse_7006
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---------------------------------------------TTAGTGATGGACCTGCAGGC---------------
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>forward_5539
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-------------------------------------------------------------------------------C
AACCCCGAGTAGCAGTAGC-------------------------------------------------------------
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>reverse_7072
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-------------------------------TTGGACGAGCTGGAAAGGAA-----------------------------
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>forward_7068
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--------AAATCGGTTGGCTTCGACCA----------------------------------------------------
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>reverse_8662
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---------------------AGGCAGGGTACCTTCAACAT---------------------------------------
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----------------------------------------------------------------------
